Pregenerated sensors for SSTR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035431Ensembl transcript IDs: ENSMUST00000044299.3, ENSMUST00000110671.3
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCACAGAACTTTTTCTTAAGCGCCTAGCTCTGCTCGGGATGGAGTaGAGCAGAGGAAGGGCCCAAGGGAAAATGTGCCTTCCTTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: GTELFLKRLALLGME*SRGRAQGKMCLPSL Trigger: CAGAGAAGGAAGGCACATTTTCCCTTGGGCCCTTCCTCTGCTCCACTCCATCCCGAGCAGAGCTAGGCGCTTAAGAAAAAGTTCTGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| 3UTR GCA 90 bp | CAAGGGAAAATGTGCCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTaGCTAGACATCCTCGAGCTGGGCTTCCTTGACAGTAAGGCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: QGKMCLPSLRVEKTS*LDILELGFLDSKAL Trigger: CAGAGCCTTACTGTCAAGGAAGCCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGGCACATTTTCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| 3UTR GCA 72 bp | AACAGGGTTCAGCGCAGGCGCGCTGCATCGCTGTCATaGACTATGACTTCAGCACCTGGTGTCGGGTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: NRVQRRRAASLS*TMTSAPGVGLP Trigger: TGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAGCGATGCAGCGCGCCTGCGCTGAACCCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| 3UTR GCA 72 bp | ATGTGCCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTaGCTAGACATCCTCGAGCTGGGCTTCCTTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: MCLPSLRVEKTS*LDILELGFLDS Trigger: ACTGTCAAGGAAGCCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR GCA 90 bp | TATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCAGCGTCCAGGCTCTTCCATaGCGTCCGCAGCGCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YDFSTWCRVTIPSHPLPSVQALP*RPQRRT Trigger: GGTCCGGCGCTGCGGACGGCATGGAAGAGCCTGGAC...GCTGGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | GTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGGAGCGCTTGCGCTGCTaGCAGCCAGCCTTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMHYDFSTWCRVTIPSHPERLRC*QPALRA Trigger: GGCCCTCAAGGCTGGCTGGCAGCAGCGCAAGCGCTC...CGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | TCGCTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCCTCCTTCCCCGCAGCTaGCTGGGCTGGGGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSCTMTSAPGVGLPFPPLLPRS*LGWGLE Trigger: CTCCAAGCCCCAGCCCAGGCAGCTGCGGGGAAGGAG...GGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | TATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCAGCTTCCCCGCAGCTGCCTaGGCTGGGGCTTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YDFSTWCRVTIPSHPLPSFPAAA*AGAWRR Trigger: TCTTCTCCAAGCCCCAGCCCAGGCAGCTGCGGGGAA...GCTGGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCGCGCCGAAGGGCCAGTaGCGCAACAGCGTGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRAPKGQ*RNSVEV Trigger: CACTTCCACGCTGTTGCGCCACTGGCCCTTCGGCGC...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCGTTGGCTGCGGTGCGTaGGAAGACCACGATGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HYDFSTWCRVTIPSHPLPVGCGA*EDHDGQ Trigger: TTGCCCATCGTGGTCTTCTCACGCACCGCAGCCAAC...GGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | GTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGTTCCCCGCAGCTGCCTaGGCTGGGGCTTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VMHYDFSTWCRVTIPSHPFPAAA*AGAWRR Trigger: TCTTCTCCAAGCCCCAGCCCAGGCAGCTGCGGGGAA...CGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | TGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCAGTGATCTTGCGCTCTaGGCGCTTGCGCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTMTSAPGVGLPFPPTRFSDLAL*ALALLP Trigger: TGGCAGCAGCGCAAGCGCTCAGAGCGCAAGATCACT...GAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | TATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCAGCCGTTATCCATCCAGCTaGGGCACAGGATGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YDFSTWCRVTIPSHPLPSRYPSS*GTGCAG Trigger: TCCAGCGCATCCTGTGCCTCAGCTGGATGGATAACG...GCTGGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCTTAAGCGCCTAGCTCTGCTCGGGATGGAGTGGAGCAGAGGAAGGGCCTGTTGCAGGCTACCGTaGCATCGCTGTTGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKRLALLGMEWSRGRACCRLP*HRCWLR Trigger: CCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACA...GGCCCTTCCTCTGCTCCACTCCATCCCGAGCAGAGCTAGGCGCTTAAGAAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR GCA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTGTTGCAGGCTACCGTaGCATCGCTGTTGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRCCRLP*HRCWLR Trigger: CCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACA...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCACGGTGGCGTCGTCTTaGTCGGCGAACACGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRTVASS*SANTLT Trigger: GGTCAACGTGTTCGCCGAGCAAGACGACGCCACCGT...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCGTTGGCTGCGGTGCGTaGGAAGACCACGATGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCTMTSAPGVGLPFPPTVGCGA*EDHDGQ Trigger: TTGCCCATCGTGGTCTTCTCACGCACCGCAGCCAAC...GGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | ATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTAGTGATCTTGCGCTCTaGGCGCTTGCGCTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MHYDFSTWCRVTIPSHPLSDLAL*ALALLP Trigger: TGGCAGCAGCGCAAGCGCTCAGAGCGCAAGATCACT...AAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | TGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCTGGCATAGCCCAGGATaGCAGACAACTGGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CTMTSAPGVGLPFPPTRFWHSPG*QTTGSR Trigger: CCGTGAGCCAGTTGTCTGTCATCCTGGGCTATGCCA...GAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCGCTGGAAAGAGCGCTTaGAGTTGTCCGACAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYDFSTWCRVTIPSHPLPAGKSA*SCPTGS Trigger: GCTTCCTGTCGGACAACTTCAAGCGCTCTTTCCAGC...GGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGAGCTGGGCTCCTTCCCCGCAGCTaGCTGGGCTGGGGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSESRKDKLPRHPRAGLLPRS*LGWGLE Trigger: CTCCAAGCCCCAGCCCAGGCAGCTGCGGGGAAGGAG...CCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR GCA 90 bp | ATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTACGGTGGCGTCGTCTTaGTCGGCGAACACGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: MHYDFSTWCRVTIPSHPLTVASS*SANTLT Trigger: GGTCAACGTGTTCGCCGAGCAAGACGACGCCACCGT...AAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | TATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCAGCAGGATGACAGACAACTaGCTCACGGTGGCGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YDFSTWCRVTIPSHPLPSRMTDN*LTVASS Trigger: AGACGACGCCACCGTGAGCCAGTTGTCTGTCATCCT...GCTGGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGAGCTGGGGCTGCCAGCCAGCCTTaGGGGCCACCATGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSESRKDKLPRHPRAGAASQP*GPPCAS Trigger: AGATGCGCATGGTGGCCCTCAAGGCTGGCTGGCAGC...CCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR TCA 90 bp | ATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCGTTATCCATCCAGCTaGGGCACAGGATGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MHYDFSTWCRVTIPSHPLRYPSS*GTGCAG Trigger: TCCAGCGCATCCTGTGCCTCAGCTGGATGGATAACG...AAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR GCA 90 bp | GAACTTTTTCTTAAGCGCCTAGCTCTGCTCGGGATGGAGTGGAGCAGAGGAAGGCGCTGTTGGCTGCGGTaGGTGAGAAGACCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ELFLKRLALLGMEWSRGRRCWLR*VRRPRW Trigger: CCATCGTGGTCTTCTCACGCACCGCAGCCAACAGCG...CCTTCCTCTGCTCCACTCCATCCCGAGCAGAGCTAGGCGCTTAAGAAAAAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGCCCAAGGGAAAATGTGCCTTCCTTCTCTGAGAGTAGAAAAGACAAGGAGCGCTTGCGCTGCTaGCAGCCAGCCTTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGPRENVPSFSESRKDKERLRC*QPALRA Trigger: GGCCCTCAAGGCTGGCTGGCAGCAGCGCAAGCGCTC...CTTGTCTTTTCTACTCTCAGAGAAGGAAGGCACATTTTCCCTTGGGCCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR CCA 90 bp | CACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCCTTAAGGTCCCATTCTaGGAAGCGTTTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HYDFSTWCRVTIPSHPLPLKVPF*EAFRPG Trigger: GCCTGGACGAAACGCTTCCCAGAATGGGACCTTAAG...GGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCTCATCACCATTAGAGTaGTCTTGCGCTCTGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HYDFSTWCRVTIPSHPLPSSPLE*SCALSA Trigger: AGCGCTCAGAGCGCAAGATCACTCTAATGGTGATGA...GGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | TCGCTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCGCTGGAAAGAGCGCTTaGAGTTGTCCGACAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSCTMTSAPGVGLPFPPAGKSA*SCPTGS Trigger: GCTTCCTGTCGGACAACTTCAAGCGCTCTTTCCAGC...GGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCAGGATGACAGACAACTaGCTCACGGTGGCGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCTMTSAPGVGLPFPPTRMTDN*LTVASS Trigger: AGACGACGCCACCGTGAGCCAGTTGTCTGTCATCCT...GGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCAGGCACAGGATGCGCTaGAAAGAGCGCTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRRHRMR*KERLKL Trigger: CAACTTCAAGCGCTCTTTCCAGCGCATCCTGTGCCT...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CCA 90 bp | TGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCAGGCACAGGATGCGCTaGAAAGAGCGCTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTMTSAPGVGLPFPPTRFRHRMR*KERLKL Trigger: CAACTTCAAGCGCTCTTTCCAGCGCATCCTGTGCCT...GAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCCCGCAGCAGGAAGCCCATaGGAAATGTGTATAAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: HYDFSTWCRVTIPSHPLPAAGSP*EMCIRR Trigger: TCGTCTTATACACATTTCTCATGGGCTTCCTGCTGC...GGGAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCTTAAGCGCCTAGCTCTGCTCGGGATGGAGTGGAGCAGAGGAAGGGCCTCATCACCATTAGAGTaGTCTTGCGCTCTGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKRLALLGMEWSRGRASSPLE*SCALSA Trigger: AGCGCTCAGAGCGCAAGATCACTCTAATGGTGATGA...GGCCCTTCCTCTGCTCCACTCCATCCCGAGCAGAGCTAGGCGCTTAAGAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR TCA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCGCAGCAGGAAGCCCATaGGAAATGTGTATAAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRAAGSP*EMCIRR Trigger: TCGTCTTATACACATTTCTCATGGGCTTCCTGCTGC...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | GTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGAAGGCATCCAGCAGATaGCAAAAACCATCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VMHYDFSTWCRVTIPSHPKASSR*QKPSPP Trigger: TGGTGGTGATGGTTTTTGTCATCTGCTGGATGCCTT...CGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGAGCTGGGTGGCATAGCCCAGGATaGCAGACAACTGGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSESRKDKLPRHPRAGWHSPG*QTTGSR Trigger: CCGTGAGCCAGTTGTCTGTCATCCTGGGCTATGCCA...CCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR GCA 90 bp | AAAATGTGCCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGTCCAGGCTCTTCCATaGCGTCCGCAGCGCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KMCLPSLRVEKTSCLDILVQALP*RPQRRT Trigger: GGTCCGGCGCTGCGGACGGCATGGAAGAGCCTGGAC...GAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGGCACATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR CCA 90 bp | AAAATGTGCCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGCGCCGAAGGGCCAGTaGCGCAACAGCGTGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMCLPSLRVEKTSCLDILAPKGQ*RNSVEV Trigger: CACTTCCACGCTGTTGCGCCACTGGCCCTTCGGCGC...GAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGGCACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGAGCTGGGAAGGCATCCAGCAGATaGCAAAAACCATCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSESRKDKLPRHPRAGKASSR*QKPSPP Trigger: TGGTGGTGATGGTTTTTGTCATCTGCTGGATGCCTT...CCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS TCA 90 bp | TGTATAAGACGAAGCCCACCAACCAGCGCTGGGCGGGCTCGGGCATaGGCATGTTGCAGGCTACCGTGCCATCGCTGTTGGCTGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIRRSPPTSAGRARA*ACCRLPCHRCWLRC Trigger: GCACCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGTGGGCTTCGTCTTATACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | GTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGTGCTGCCAGCCAGCCTaGAGGGCCACCATGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VMHYDFSTWCRVTIPSHPCCQPA*RATMRI Trigger: GATGCGCATGGTGGCCCTCAAGGCTGGCTGGCAGCA...CGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CCA 90 bp | CGGGCTGGAAGTCCTCCACGCTGTAGGCTCGACTCTTCAGGGCAGTaGCATAGTAGTCGACTGGTTCCTCCGCAGCGTTATCCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGSPPRCRLDSSGQ*HSSRLVPPQRYPSS Trigger: GCTGGATGGATAACGCTGCGGAGGAACCAGTCGACTACTATGCCACTGCCCTGAAGAGTCGAGCCTACAGCGTGGAGGACTTCCAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCTGCTGCCAGCCAGCCTaGAGGGCCACCATGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSCTMTSAPGVGLPFPPTCCQPA*RATMRI Trigger: GATGCGCATGGTGGCCCTCAAGGCTGGCTGGCAGCA...GGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | GTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCACGGTGGCGTCGTCTaGCTCGGCGAACACGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VMHYDFSTWCRVTIPSHPHGGVV*LGEHVD Trigger: GTCAACGTGTTCGCCGAGCAAGACGACGCCACCGTG...CGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CCA 90 bp | AAGCCCATGAGAAATGTGTATAAGACGAAGCCCACCAACCAGCGCTaGGCGGGCTCGGGCATGAGCATGTTGCAGGCTACCGTGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KPMRNVYKTKPTNQR*AGSGMSMLQATVPS Trigger: CGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGTGGGCTTCGTCTTATACACATTTCTCATGGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTCGGGCATGAGCATGTaGCAGGCTACCGTGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRSGMSM*QATVPS Trigger: CGATGGCACGGTAGCCTGCAACATGCTCATGCCCGA...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCTTCTCGGGCATGAGCATGTaGCAGGCTACCGTGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: CTMTSAPGVGLPFPPTRFSGMSM*QATVPS Trigger: CGATGGCACGGTAGCCTGCAACATGCTCATGCCCGA...GAAGCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS GCA 90 bp | ATCATCACCATTAGAGTGATCTTGCGCTCTGAGCGCTTGCGCTGCTaGCAGCCAGCCTTGAGGGCCACCATGCGCATCTTGGCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IITIRVILRSERLRC*QPALRATMRILAMM Trigger: CATCATTGCCAAGATGCGCATGGTGGCCCTCAAGGCTGGCTGGCAGCAGCGCAAGCGCTCAGAGCGCAAGATCACTCTAATGGTGATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | TCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCCGCCGCTGGAAAGAGCGCTaGAAGTTGTCCGACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCTMTSAPGVGLPFPPTRRWKER*KLSDRK Trigger: CTTCCTGTCGGACAACTTCAAGCGCTCTTTCCAGCG...GCGGGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCATGCACTATGACTTCAGCACCTGGTGTCGGGTTACCATTCCCTCCCACCACCATTAGAGTGATCTaGCGCTCTGAGCGCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSCTMTSAPGVGLPFPPTTIRVI*RSERLR Trigger: GCGCAAGCGCTCAGAGCGCAAGATCACTCTAATGGT...GGTGGGAGGGAATGGTAACCCGACACCAGGTGCTGAAGTCATAGTGCATGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTTCTCTGAGAGTAGAAAAGACAAGTTGCCTAGACATCCTCGAGCTGGGCACGGTGGCGTCGTCTaGCTCGGCGAACACGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSFSESRKDKLPRHPRAGHGGVV*LGEHVD Trigger: GTCAACGTGTTCGCCGAGCAAGACGACGCCACCGTG...CCCAGCTCGAGGATGTCTAGGCAACTTGTCTTTTCTACTCTCAGAGAAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044299.3 |
||
| CDS TCA 72 bp | CGAAGCCCACCAACCAGCGCTGGGCGGGCTCGGGCATaGGCATGTTGCAGGCTACCGTGCCATCGCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPPTSAGRARA*ACCRLPCHRCW Trigger: CCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGTGGGCTTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CAA 72 bp | ACCAACCAGCGCTGGGCGGGCTCGGGCATGAGCATGTaGCAGGCTACCGTGCCATCGCTGTTGGCTGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TNQRWAGSGMSM*QATVPSLLAAV Trigger: CACCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CAA 90 bp | ACGAAGCCCACCAACCAGCGCTGGGCGGGCTCGGGCATGAGCATGTaGCAGGCTACCGTGCCATCGCTGTTGGCTGCGGTGCGTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TKPTNQRWAGSGMSM*QATVPSLLAAVREK Trigger: CTTCTCACGCACCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGTGGGCTTCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CAA 90 bp | GCGGGCTCGGGCATGAGCATGTTGCAGGCTACCGTGCCATCGCTGTaGGCTGCGGTGCGTGAGAAGACCACGATGGGCAAGATAACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGSGMSMLQATVPSL*AAVREKTTMGKITS Trigger: ACTGGTTATCTTGCCCATCGTGGTCTTCTCACGCACCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCCCGAGCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CAA 72 bp | GGCATGAGCATGTTGCAGGCTACCGTGCCATCGCTGTaGGCTGCGGTGCGTGAGAAGACCACGATGGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMSMLQATVPSL*AAVREKTTMGK Trigger: CTTGCCCATCGTGGTCTTCTCACGCACCGCAGCCAACAGCGATGGCACGGTAGCCTGCAACATGCTCATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS GCA 72 bp | ATTAGAGTGATCTTGCGCTCTGAGCGCTTGCGCTGCTaGCAGCCAGCCTTGAGGGCCACCATGCGCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IRVILRSERLRC*QPALRATMRIL Trigger: CAAGATGCGCATGGTGGCCCTCAAGGCTGGCTGGCAGCAGCGCAAGCGCTCAGAGCGCAAGATCACTCTAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CCA 72 bp | AGAAATGTGTATAAGACGAAGCCCACCAACCAGCGCTaGGCGGGCTCGGGCATGAGCATGTTGCAGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: RNVYKTKPTNQR*AGSGMSMLQAT Trigger: GGTAGCCTGCAACATGCTCATGCCCGAGCCCGCCCAGCGCTGGTTGGTGGGCTTCGTCTTATACACATTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CCA 72 bp | GCAGCGTTATCCATCCAGCTGAGGCACAGGATGCGCTaGAAAGAGCGCTTGAAGTTGTCCGACAGGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AALSIQLRHRMR*KERLKLSDRKP Trigger: CGGCTTCCTGTCGGACAACTTCAAGCGCTCTTTCCAGCGCATCCTGTGCCTCAGCTGGATGGATAACGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CAA 72 bp | CAGGATGACAGACAACTGGCTCACGGTGGCGTCGTCTaGCTCGGCGAACACGTTGACCAGCTGTACCACGTA | + |
|
Preference number: 6 (lower is better) Translates to: QDDRQLAHGGVV*LGEHVDQLYHV Trigger: TACGTGGTACAGCTGGTCAACGTGTTCGCCGAGCAAGACGACGCCACCGTGAGCCAGTTGTCTGTCATCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||
| CDS CCA 72 bp | AGTCCTCCACGCTGTAGGCTCGACTCTTCAGGGCAGTaGCATAGTAGTCGACTGGTTCCTCCGCAGCGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SPPRCRLDSSGQ*HSSRLVPPQRY Trigger: ATAACGCTGCGGAGGAACCAGTCGACTACTATGCCACTGCCCTGAAGAGTCGAGCCTACAGCGTGGAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044299.3 ENSMUST00000110671.3 |
||