Pregenerated sensors for SSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021427Ensembl transcript IDs: ENSMUST00000021864.8, ENSMUST00000224399.2, ENSMUST00000225246.2, ENSMUST00000225319.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTATGTGAAAGCCAGAGGACAACCTTGGGTGACTGCCACCTTTaGGGCAGGGCTGGCCAACAAGTCCAGGGAGGCTCCTGGCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: RVCESQRTTLGDCHL*GRAGQQVQGGSWPL Trigger: GAGGGGCCAGGAGCCTCCCTGGACTTGTTGGCCAGCCCTGCCTCAAAGGTGGCAGTCACCCAAGGTTGTCCTCTGGCTTTCACATACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | GTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTaGGGGACGGGGATGGAGCCCAGGGCCACACACATCCTGAACAAG | + |
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Preference number: 1 (lower is better) Translates to: VTMTRKVSSPAAHVC*GTGMEPRATHILNK Trigger: CTTGTTCAGGATGTGTGTGGCCCTGGGCTCCATCCCCGTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR TCA 90 bp | AGAGAACCAAGGACTGGAGTAAGCAAGCCCAGCACGGCAGAGTGGTaGGAAGAGCTGGAGCTAGCCCGGGCCAGCATCACCATCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: REPRTGVSKPSTAEW*EELELARASITISG Trigger: GCCAGAGATGGTGATGCTGGCCCGGGCTAGCTCCAGCTCTTCTCACCACTCTGCCGTGCTGGGCTTGCTTACTCCAGTCCTTGGTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | GGGGAGAGGAAGGGTTCAGCCACAAGGCTCAGCAGCTACGTGTTGTaGACTGGTGTTGGTCGGGACAAGTGCTCGGTCAGGAGCAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GERKGSATRLSSYVL*TGVGRDKCSVRSKS Trigger: GCTCTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCCTTCCTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | AGCAGCAAGCTGGTGCAGAGAAGACATCCAGGCCGCAGGGGCCGCTaGTCTAAGCAACTTCCGGAAGCAGCTGAAGCAGACACATCTTGC | + |
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Preference number: 1 (lower is better) Translates to: SSKLVQRRHPGRRGR*SKQLPEAAEADTSC Trigger: GCAAGATGTGTCTGCTTCAGCTGCTTCCGGAAGTTGCTTAGACCAGCGGCCCCTGCGGCCTGGATGTCTTCTCTGCACCAGCTTGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
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| 3UTR CCA 90 bp | TATGGCCACAGACTCCGACTGCTCAGTCCACACATAAGCAGCAGTTaGCGTCTATGGTGGCGTGGCCTCTCTGCACTCATTCCCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YGHRLRLLSPHISSS*RLWWRGLSALIPRR Trigger: CCTCCTGGGAATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGACTGAGCAGTCGGAGTCTGTGGCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | CTGATGCTCACAGCAGCCACCCCTGCTGTGCAGTTAGATACAAGCTaGGACAGACAGCAAGCAGAAGGCCGGCTTGTGCCCTCAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LMLTAATPAVQLDTS*DRQQAEGRLVPSVW Trigger: CCAAACTGAGGGCACAAGCCGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTGGCTGCTGTGAGCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR TCA 90 bp | CTAGGAGAGCAGGCTTGGCCAGCCAGGGAGAAATCAAAAGAAACATaGAAGACCACGAGCCTTGCGAGGGGAACGGAGGCAGCCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LGEQAWPAREKSKET*KTTSLARGTEAARS Trigger: GCTTCTGGCTGCCTCCGTTCCCCTCGCAAGGCTCGTGGTCTTTCATGTTTCTTTTGATTTCTCCCTGGCTGGCCAAGCCTGCTCTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | GAGGAAGGGTTCAGCCACAAGGCTCAGCAGCTACGTGTTGTGCACTaGTGTTGGTCGGGACAAGTGCTCGGTCAGGAGCAAGAGCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: EEGFSHKAQQLRVVH*CWSGQVLGQEQELD Trigger: ATCAAGCTCTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR TCA 90 bp | GCCACCAGTCACGGGTGGTTGTGTAAAAGACACACTGCATGCATCTaGCTCCAGAAACACCTAACCACCCAGGGGGCAGAAGGCAACCCA | + |
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Preference number: 1 (lower is better) Translates to: ATSHGWLCKRHTACI*LQKHLTTQGAEGNP Trigger: TGGGTTGCCTTCTGCCCCCTGGGTGGTTAGGTGTTTCTGGAGTCAGATGCATGCAGTGTGTCTTTTACACAACCACCCGTGACTGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | GCAGAAACTACCCAGCATGCCTCTGATGCTCACAGCAGCCACCCCTaGTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: AETTQHASDAHSSHP*CAVRYKLGQTASRR Trigger: CCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTGGCTGCTGTGAGCATCAGAGGCATGCTGGGTAGTTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | GCCAGCCAGGGAGAAATCAAAAGAAACATGAAAGACCACGAGCCTTaGGAGGGGAACGGAGGCAGCCAGAAGCACAGAGGACACTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: ASQGEIKRNMKDHEP*EGNGGSQKHRGHSD Trigger: GTCAGAGTGTCCTCTGTGCTTCTGGCTGCCTCCGTTCCCCTCGCAAGGCTCGTGGTCTTTCATGTTTCTTTTGATTTCTCCCTGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | GGGTTCAGCCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTaGTCGGGACAAGTGCTCGGTCAGGAGCAAGAGCTTGATAATCCT | + |
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Preference number: 1 (lower is better) Translates to: GFSHKAQQLRVVHWC*SGQVLGQEQELDNP Trigger: AGGATTATCAAGCTCTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR TCA 90 bp | CGTTTAACAAACCAGCTTCCCTTCCCACTTTCTTACAACGGCGACTaGCTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATT | + |
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Preference number: 1 (lower is better) Translates to: RLTNQLPFPLSYNGD*LQGPQPQCVCSHPI Trigger: AATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCGTTGTAAGAAAGTGGGAAGGGAAGCTGGTTTGTTAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | CACACACAGAAGCCAGCATCTGAAAGCCAGCTGGGGGAATCCACCTaGCTCCGGATAACTCCCATTTGCATGAAGCATTACTCAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: HTQKPASESQLGEST*LRITPICMKHYSVW Trigger: CCAAACTGAGTAATGCTTCATGCAAATGGGAGTTATCCGGAGGCAGGTGGATTCCCCCAGCTGGCTTTCAGATGCTGGCTTCTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| 3UTR CCA 90 bp | ATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTaGTACTCGAGAAAGTTCGTATATAGCCGAGATGCCTTCCCCATC | + |
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Preference number: 1 (lower is better) Translates to: MSLCVSSLRTHQSHG*YSRKFVYSRDAFPI Trigger: GATGGGGAAGGCATCTCGGCTATATACGAACTTTCTCGAGTACCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | CTGAAGCCACATTTAACAGTTAGGCTCCAAGTCACTTCAATTCAGTaGCTCTTTTCCATGTACAGAGGACAACGCGCCTGCCCCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LKPHLTVRLQVTSIQ*LFSMYRGQRACPRE Trigger: CTCCCTGGGGCAGGCGCGTTGTCCTCTGTACATGGAAAAGAGCCACTGAATTGAAGTGACTTGGAGCCTAACTGTTAAATGTGGCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | CAACCTAAGTGTGACAAGACCGTACACAAGACTCAGGGCTCACAATaGGGCAGAGGGAGATATGCTAATGGGAGGACAAACTGTCACGAC | + |
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Preference number: 1 (lower is better) Translates to: QPKCDKTVHKTQGSQ*GRGRYANGRTNCHD Trigger: GTCGTGACAGTTTGTCCTCCCATTAGCATATCTCCCTCTGCCCCATTGTGAGCCCTGAGTCTTGTGTACGGTCTTGTCACACTTAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | TTAGTGATAAAGCCACATTCTCCAAGCTTGCAGCCTCAAGATGAGTaGCCTTTCTGCGAGGCACATCAACAGCGTGACTTCGAAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LVIKPHSPSLQPQDE*PFCEAHQQRDFEEQ Trigger: CTGCTCTTCGAAGTCACGCTGTTGATGTGCCTCGCAGAAAGGCCACTCATCTTGAGGCTGCAAGCTTGGAGAATGTGGCTTTATCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | AGGATTTACTTAGGAAACACAGGCCAAGTTCACGGACTCGTTACATaGCTGCCGATGCTACCCAACACCACGGAAGTAAAGTACCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: RIYLGNTGQVHGLVT*LPMLPNTTEVKYLN Trigger: GTTGAGGTACTTTACTTCCGTGGTGTTGGGTAGCATCGGCAGCCATGTAACGAGTCCGTGAACTTGGCCTGTGTTTCCTAAGTAAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | GGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTGGGTCAAATaGACCCTCAAGCTCACCGTCCTTTCTATCAAGAGCAGGAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GCKTPNKHKQKSWVK*TLKLTVLSIKSRKA Trigger: GGCCTTCCTGCTCTTGATAGAAAGGACGGTGAGCTTGAGGGTGCATTTGACCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | ACAGGCACGAATTACCTGTGCCTTCAACACCAGAGAGCTATCCTCTaGGCTTTCCAGATGCACTGGAGTTTCTTTGTGATGTCTTACTGT | + |
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Preference number: 1 (lower is better) Translates to: TGTNYLCLQHQRAIL*AFQMHWSFFVMSYC Trigger: ACAGTAAGACATCACAAAGAAACTCCAGTGCATCTGGAAAGCCCAGAGGATAGCTCTCTGGTGTTGAAGGCACAGGTAATTCGTGCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | AGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGACACTCGCGTaGAATGTGTATCAACGTTGCATGAGAACTACTGGTTCATTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SVRLTRFSTVILTLA*NVYQRCMRTTGSFP Trigger: AGGGAATGAACCAGTAGTTCTCATGCAACGTTGATACACATTCCACGCGAGTGTCAAGATGACCGTGCTAAATCTGGTGAGCCTGACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATTATTaGAAACCCAAACTCTTATTATCAGTGGGAACGGGAGGAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCVCDY*KPKLLLSVGTGGGK Trigger: CTTCCCTCCTCCCGTTCCCACTGATAATAAGAGTTTGGGTTTCCAATAATCACACACACACACACACACACACACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | CTTGACACTCGCGTGGAATGTGTATCAACGTTGCATGAGAACTACTaGTTCATTCCCTCTATTTTCACTGAAGAGACACACAAGATACCC | + |
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Preference number: 1 (lower is better) Translates to: LDTRVECVSTLHENY*FIPSIFTEETHKIP Trigger: GGGTATCTTGTGTGTCTCTTCAGTGAAAATAGAGGGAATGAACCAGTAGTTCTCATGCAACGTTGATACACATTCCACGCGAGTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGATTATTGGAAACCCAAACTCTTATTATCAGTaGGAACGGGAGGAGGGAAGGTCTTTGAAGCCTCATGTGTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVIIGNPNSYYQ*EREEGRSLKPHVSF Trigger: AAAAGACACATGAGGCTTCAAAGACCTTCCCTCCTCCCGTTCCCACTGATAATAAGAGTTTGGGTTTCCAATAATCACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR TCA 90 bp | AAAGCAATTCTATTCAAGTCACATCAGCAGAGTTCAAGTTCTCAGTaGGCACACACACATACACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: KAILFKSHQQSSSSQ*AHTHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGCTCACTGAGAACTTGAACTCTGCTGATGTGACTTGAATAGAATTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
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| 3UTR TCA 90 bp | GACAGACAGCAAGCAGAAGGCCGGCTTGTGCCCTCAGTTTGGATTTaGTCGATTCCAAGAAATAAACAAATTATTCCCTCAAAACAATTC | + |
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Preference number: 1 (lower is better) Translates to: DRQQAEGRLVPSVWI*SIPRNKQIIPSKQF Trigger: GAATTGTTTTGAGGGAATAATTTGTTTATTTCTTGGAATCGATCAAATCCAAACTGAGGGCACAAGCCGGCCTTCTGCTTGCTGTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | ATTGTGGATAAACTTTTCATTAGTGGTCATAGCTTTAGACCTAGGTaGCTTCTAGTTTCCACGGGGACAGATCACACCTCAACAGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: IVDKLFISGHSFRPR*LLVSTGTDHTSTAF Trigger: AAAAGCTGTTGAGGTGTGATCTGTCCCCGTGGAAACTAGAAGGCACCTAGGTCTAAAGCTATGACCACTAATGAAAAGTTTATCCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR GCA 90 bp | CACACACTTAGCACTTTTACTCTTCTTCCAAGAAAGAACTGTCCTTaGATAGTTAGTGGACTGTATTCCTTCTCATCTACATCCACGAAG | + |
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Preference number: 1 (lower is better) Translates to: HTLSTFTLLPRKNCP*IVSGLYSFSSTSTK Trigger: CTTCGTGGATGTAGATGAGAAGGAATACAGTCCACTAACTATGCAAGGACAGTTCTTTCTTGGAAGAAGAGTAAAAGTGCTAAGTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CAA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTaGGGGGACGGGGATGGAGCCCAGGGCCACACACATCCTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCV*GDGDGAQGHTHPEQ Trigger: TTGTTCAGGATGTGTGTGGCCCTGGGCTCCATCCCCGTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CAA 90 bp | ATGGGGGAGAGGAAGGGTTCAGCCACAAGGCTCAGCAGCTACGTGTaGTGCACTGGTGTTGGTCGGGACAAGTGCTCGGTCAGGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: MGERKGSATRLSSYV*CTGVGRDKCSVRSK Trigger: CTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCCTTCCTCTCCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTGCTACAACGGCGACTGACTaGAGGGTCCCCAGCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQGSAATCCALVLVGTSATTATD*RVPSLS Trigger: ACTGAGGCTGGGGACCCTGCAGTCAGTCGCCGTTGT...AGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CAA 90 bp | GTATGGCCACAGACTCCGACTGCTCAGTCCACACATAAGCAGCAGTaGGCGTCTATGGTGGCGTGGCCTCTCTGCACTCATTCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VWPQTPTAQSTHKQQ*ASMVAWPLCTHSQE Trigger: CTCCTGGGAATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGACTGAGCAGTCGGAGTCTGTGGCCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACTACCCAGCATGCCTCTGATGCTCACAGCAGCCACCCCTGCTGTGCAGTTAGCAGTTGGCGTCTATaGTGGCGTGGCCTCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ETTQHASDAHSSHPCCAVSSWRL*WRGLSA Trigger: TGCAGAGAGGCCACGCCACCATAGACGCCAACTGCT...AACTGCACAGCAGGGGTGGCTGCTGTGAGCATCAGAGGCATGCTGGGTAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTACCGCTAACAAGAAATaGGAACCAGCTGCTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RRLTAGSPASVCVFPPNSTANKK*EPAAPL Trigger: GAGAGGAGCAGCTGGTTCTCATTTCTTGTTAGCGGT...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACACTCAGGGCTCACAATaGGGCAGAGGGAGATATGCT | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDTQGSQ*GRGRYA Trigger: AGCATATCTCCCTCTGCCCCATTGTGAGCCCTGAGT...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACATGATGATGCCAGGCTaGTGCCTACCAAGTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDMMMPG*CLPSST Trigger: AGTGGAACTTGGTAGGCATCAGCCTGGCATCATCAT...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACAGGCTCTCTAATAAATaGACCTGCCTGAGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDRLSNK*TCLSHP Trigger: AGGGTGGCTCAGGCAGGTTCATTTATTAGAGAGCCT...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGAAAGACCACGAGCCTTaGGAGGGGAACGGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILKDHEP*EGNGGS Trigger: GCTGCCTCCGTTCCCCTCGCAAGGCTCGTGGTCTTT...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACCGTAGCCTTTTATACTaGGCCTCACTCACTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDRSLLY*ASLTSP Trigger: AGGAGAAGTGAGTGAGGCTCAGTATAAAAGGCTACG...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACCACGCAGGCAGAATATaGCTTCAAAGACAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDHAGRI*LQRQRE Trigger: TTCCCTCTGTCTTTGAAGCCATATTCTGCCTGCGTG...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACCTGAACCACCCAATATaGGTGTTAGGAACTGACTCG | + |
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Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDLNHPI*VLGTDS Trigger: CGAGTCAGTTCCTAACACCCATATTGGGTGGTTCAG...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CAA 90 bp | ACCACCCAGGGGGCAGAAGGCAACCCATCAGAGAAGAAACCAAAGTaGCCTCTAACTGCGACCCTGGAATCTGAACTCTGGTGCTATGTG | + |
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Preference number: 2 (lower is better) Translates to: TTQGAEGNPSEKKPK*PLTATLESELWCYV Trigger: CACATAGCACCAGAGTTCAGATTCCAGGGTCGCAGTTAGAGGCAACTTTGGTTTCTTCTCTGATGGGTTGCCTTCTGCCCCCTGGGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTCTGCTAAATACTTACTaGTGCTATAGTAGACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRLTAGSPASVCVFPPNSLLNTY*CYSRRL Trigger: CAGGCGTCTACTATAGCATCAGTAAGTATTTAGCAG...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTGCTAGGATTAAAGGCATGTaGCACTGCCAGGTGCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PQGSAATCCALVLVGTSARIKGM*HCQVLK Trigger: TTTCAGCACCTGGCAGTGGCACATGCCTTTAATCCT...AGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGCACACTACATGCCCTTCCTACCTTTTCCCTTCTGTACTGGGGACTGAGCAGGCCACGTGGACAATaGACAACCCAACAGTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGTLHALPTFSLLYWGLSRPRGQ*TTQQSS Trigger: ACTGGACTGTTGGGTTGTCCATTGTCCACGTGGCCT...GCTCAGTCCCCAGTACAGAAGGGAAAAGGTAGGAAGGGCATGTAGTGTGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGGTACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTGCCATCTTTGCCCATTCCTGGCTGCTaGGGCTCCTCCCCTTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: KEVRASLLHTESCLLPSLPIPGC*GSSPST Trigger: TGTAGAAGGGGAGGAGCCCCAGCAGCCAGGAATGGG...CAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTACCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR-3UTR TCA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTATACAATTAATGCCCTaGACCAACTATTGCTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RRLTAGSPASVCVFPPNSIQLMP*TNYCSA Trigger: AGCTGAGCAATAGTTGGTTCAGGGCATTAATTGTAT...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACAAATCAAAAGAAACATaGAAGACCACGAGCCTTGCG | + |
|
Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDKSKET*KTTSLA Trigger: CGCAAGGCTCGTGGTCTTTCATGTTTCTTTTGATTT...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAGATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTGGGGTACACCTGGCATTTaGACATGGGTTCTGGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: FKMSLCVSSLRTHQSHGWGTPGI*TWVLET Trigger: GGTCTCCAGAACCCATGTGCAAATGCCAGGTGTACC...CCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACATCTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 90 bp | AGTTGTGAGCCACCATGTGGTTGCTGGCAATTAAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SCEPPCGCWQLNSGP*EEQSVLLTTEPSLQ Trigger: CTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTTAATTGCCAGCAACCACATGGTGGCTCACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 90 bp | CTACGTCTGAGCTCCATCCCTGGCTCTTTGAACAGTCTCATTTCATaGCCCAGGCTGGTCTTGAAATTCATTCTGCAGCTCAAGCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LRLSSIPGSLNSLIS*PRLVLKFILQLKQV Trigger: GACCTGCTTGAGCTGCAGAATGAATTTCAAGACCAGCCTGGGCAATGAAATGAGACTGTTCAAAGAGCCAGGGATGGAGCTCAGACGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGCACACTACATGCCCTTCCTACCTTTTCCCTTCTGTACTGGGGACTGAGCTGTTCTAGTGCTCACTaGTCTAATGATGATGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGTLHALPTFSLLYWGLSCSSAH*SNDDAR Trigger: CCTGGCATCATCATTAGAGCAGTGAGCACTAGAACA...GCTCAGTCCCCAGTACAGAAGGGAAAAGGTAGGAAGGGCATGTAGTGTGCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACTGTGATGTCTTACTGTaGCTAAAGAAAACCCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDCDVLL*LKKTQT Trigger: AGTTTGGGTTTTCTTTAGGCACAGTAAGACATCACA...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCATTTTCAGCAATCGTATaGCCACAGACTCCGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DKRKSGVNKRHQSWTEASFSAIV*PQTPTA Trigger: AGCAGTCGGAGTCTGTGGCCATACGATTGCTGAAAA...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCAGCTATAGTAGACGCCTaGCACCTGAAGACTCAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: DKRKSGVNKRHQSWTEASAIVDA*HLKTQV Trigger: AACTTGAGTCTTCAGGTGCCAGGCGTCTACTATAGC...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 90 bp | AGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTaGACACTCGCGTGGAATGTGTATCAACGTTGCATGAGAACTACT | + |
|
Preference number: 2 (lower is better) Translates to: RTGRSVRLTRFSTVI*TLAWNVYQRCMRTT Trigger: AGTAGTTCTCATGCAACGTTGATACACATTCCACGCGAGTGTCAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 90 bp | CAGAGAAGACCGAAAGCATTAGTGATAAAGCCACATTCTCCAAGCTaGCAGCCTCAAGATGAGTGGCCTTTCTGCGAGGCACATCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: QRRPKALVIKPHSPS*QPQDEWPFCEAHQQ Trigger: CTGTTGATGTGCCTCGCAGAAAGGCCACTCATCTTGAGGCTGCAAGCTTGGAGAATGTGGCTTTATCACTAATGCTTTCGGTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGTCTAATGAGGGTATGTaGAAGCCAGAGGACAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILSNEGM*KPEDNL Trigger: AAGGTTGTCCTCTGGCTTTCACATACCCTCATTAGA...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGTACAGAGATGCACAATaGATTTCCCACAGTGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILYRDAQ*ISHSAH Trigger: ATGGGCACTGTGGGAAATGCATTGTGCATCTCTGTA...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTGCTTGTTCAATGTGTGCATaGTACAAGCACATCTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: PQGSAATCCALVLVGTSACSMCA*YKHICI Trigger: TATACAGATGTGCTTGTACCATGCACACATTGAACA...AGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | CTCATCAGTGAATATTTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGCCTGAGACCACCGGATaGCTGAGCTGCAGGGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LISEYFFKWSWKLLSYVQPETTG*LSCRVS Trigger: GGAGACCCTGCAGCTCAGCCATCCGGTGGTCTCAGG...CTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAAATATTCACTGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| 3UTR CAA 90 bp | CAGAACCAAGCAGACATCAATACAATTAATGCCCTGAACCAACTATaGCTCAGCTACCTGCAACTGCTGAGTCCTGTGCACCCTAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QNQADINTINALNQL*LSYLQLLSPVHPSK Trigger: CTTGCTAGGGTGCACAGGACTCAGCAGTTGCAGGTAGCTGAGCAATAGTTGGTTCAGGGCATTAATTGTATTGATGTCTGCTTGGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGCAAATACAGGCAATTTaGCATTTCACCCCCTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILQIQAI*HFTPFC Trigger: GCAAAAGGGGGTGAAATGTCAAATTGCCTGTATTTG...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCATTTATTTCTTGGTGCTaGGAACTGAACGCAGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: DKRKSGVNKRHQSWTEASFISWC*ELNAVL Trigger: CAAGACTGCGTTCAGTTCTCAGCACCAAGAAATAAA...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCACCCCCTTTTGCAAAGTaGTTAACAATTACAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: DKRKSGVNKRHQSWTEASPPFAK*LTITED Trigger: GTCTTCTGTAATTGTTAATCACTTTGCAAAAGGGGG...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTGGAACCATGTGTGGAATTaGATTCCATTCATTATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FKMSLCVSSLRTHQSHGWNHVWN*IPFIME Trigger: CTCCATAATGAATGGAATTCAATTCCACACATGGTT...CCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACATCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGATCCTTACATTCACTTaGCAGATTCTAAAGCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILILTFT*QILKPT Trigger: AGTTGGCTTTAGAATCTGTCAAGTGAATGTAAGGAT...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGACTCCATCTCTAACATaGATATGGGTATTTCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: TLRTGRSVRLTRFSTVILTPSLT*IWVFQL Trigger: AAGCTGAAATACCCATATTCATGTTAGAGATGGAGT...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCACTGGTTAGTTTAGTTTaGTTTCTGAAAAGTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: DKRKSGVNKRHQSWTEASLVSLV*FLKSLL Trigger: CAGGAGACTTTTCAGAAATCAAACTAAACTAACCAG...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGAATTCAAGGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTGGGCAGAAGGCCGGCTTGTaGCCTCAGTTTGGATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LKEFKVVRPQINTNKSRGQKAGL*PQFGFD Trigger: ATCAAATCCAAACTGAGGGCACAAGCCGGCCTTCTG...CCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACCTTGAATTCCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTGGACAATCCAAACATACTaGTTTCTGTTTTTGAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: FKMSLCVSSLRTHQSHGWTIQTY*FLFLKR Trigger: CCGTTTCAAAAACAGAAACCAGTATGTTTGGATTGT...CCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACATCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAAGCAATTCTATTCAAGTCACATCAGCAGAGTTCAAGTTCTCAGTGAGCAGGGTCTATGGACTGTaGAAAGGTGGAGTCACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IQSNSIQVTSAEFKFSVSRVYGL*KGGVTQ Trigger: TTGAGTGACTCCACCTTTTCACAGTCCATAGACCCT...GCTCACTGAGAACTTGAACTCTGCTGATGTGACTTGAATAGAATTGCTTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGAATTCAAGGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTGGGCCCAACAGTCCAGTCTaGACAGACAGACAATTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LKEFKVVRPQINTNKSRGPNSPV*TDRQFF Trigger: AAAGAATTGTCTGTCTGTGCAGACTGGACTGTTGGG...CCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACCTTGAATTCCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR CAA 90 bp | AAATCCAGAAAGACTCCCAGCACTTCAGAGAGAATCAGTCTAGTTTaGTGTAAAGGAAAAAGGGACAGAACCAAGCAGACATCAATACAA | + |
|
Preference number: 2 (lower is better) Translates to: KSRKTPSTSERISLV*CKGKRDRTKQTSIQ Trigger: TTGTATTGATGTCTGCTTGGTTCTGTCCCTTTTTCCTTTACACAAAACTAGACTGATTCTCTCTGAAGTGCTGGGAGTCTTTCTGGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGAATTCAAGGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTGGGCATTTCACCCCCTTTTaGAAAGTGATTAACAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: LKEFKVVRPQINTNKSRGHFTPF*KVINNY Trigger: GTAATTGTTAATCACTTTGCAAAAGGGGGTGAAATG...CCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACCTTGAATTCCTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGGAATTCAAGGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTGGGTTTACAGTCCAGAAATaGAAATACAGGCAATTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LKEFKVVRPQINTNKSRGFTVQK*KYRQFD Trigger: GTCAAATTGCCTGTATTTGCATTTCTGGACTGTAAA...CCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACCTTGAATTCCTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | ACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTaGGGGACGGGGATGGAGCCCAGGGCCACACACATC | + |
|
Preference number: 3 (lower is better) Translates to: TRKVSSPAAHVC*GTGMEPRATHI Trigger: GATGTGTGTGGCCCTGGGCTCCATCCCCGTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | AGGACTGGAGTAAGCAAGCCCAGCACGGCAGAGTGGTaGGAAGAGCTGGAGCTAGCCCGGGCCAGCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: RTGVSKPSTAEW*EELELARASIT Trigger: GGTGATGCTGGCCCGGGCTAGCTCCAGCTCTTCTCACCACTCTGCCGTGCTGGGCTTGCTTACTCCAGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | CCAGGCCACCCCGAGGCTCCCAGGCCACGTGGACAATaGACAACCCAACAGTCCAGTCTGCACAGACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PGHPEAPRPRGQ*TTQQSSLHRQT Trigger: TGTCTGTCTGTGCAGACTGGACTGTTGGGTTGTCCATTGTCCACGTGGCCTGGGAGCCTCGGGGTGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | GAAAGCCAGAGGACAACCTTGGGTGACTGCCACCTTTaGGGCAGGGCTGGCCAACAAGTCCAGGGAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESQRTTLGDCHL*GRAGQQVQGGS Trigger: GGAGCCTCCCTGGACTTGTTGGCCAGCCCTGCCTCAAAGGTGGCAGTCACCCAAGGTTGTCCTCTGGCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | AAGCAGCAGTTGGCGTCTATGGTGGCGTGGCCTCTCTaGACTCATTCCCAGGAGGCCGAGAACACGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KQQLASMVAWPL*THSQEAENTRA Trigger: TGCCCTCGTGTTCTCGGCCTCCTGGGAATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | CTCAGTCCACACATAAGCAGCAGTTGGCGTCTATGGTaGCGTGGCCTCTCTGCACTCATTCCCAGGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LSPHISSSWRLW*RGLSALIPRRP Trigger: CGGCCTCCTGGGAATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | ACAGCAGCCACCCCTGCTGTGCAGTTAGATACAAGCTaGGACAGACAGCAAGCAGAAGGCCGGCTTGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TAATPAVQLDTS*DRQQAEGRLVP Trigger: GGGCACAAGCCGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTGGCTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | TGGCTCACCTCCCCCGCCCCCAGGGTCTATGGACTGTaGAAAGGTGGAGTCACTCAACCCTTTATGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WLTSPAPRVYGL*KGGVTQPFMRP Trigger: AGGCCTCATAAAGGGTTGAGTGACTCCACCTTTTCACAGTCCATAGACCCTGGGGGCGGGGGAGGTGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR GCA 72 bp | GCTCACCGTCCTTTCTATCAAGAGCAGGAAGGCCTCTaGACACTGCAGGAAGGGCGTAACCACACCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: AHRPFYQEQEGL*TLQEGRNHTST Trigger: GGTGGAGGTGTGGTTACGCCCTTCCTGCAGTGTGCAGAGGCCTTCCTGCTCTTGATAGAAAGGACGGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | AGCTTCCCTTCCCACTTTCTTACAACGGCGACTGACTaGAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: SFPSHFLTTATD*RVPSLSVCVPT Trigger: GGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCGTTGTAAGAAAGTGGGAAGGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | AAGGGTTCAGCCACAAGGCTCAGCAGCTACGTGTTGTaGACTGGTGTTGGTCGGGACAAGTGCTCGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGSATRLSSYVL*TGVGRDKCSVR Trigger: CCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TCCACACATAAGCAGCAGTTGGCGTCTATGGTGGCGTaGCCTCTCTGCACTCATTCCCAGGAGGCCGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: STHKQQLASMVA*PLCTHSQEAEN Trigger: GTTCTCGGCCTCCTGGGAATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | AACCAGCTTCCCTTCCCACTTTCTTACAACGGCGACTaGCTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NQLPFPLSYNGD*LQGPQPQCVCS Trigger: GGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCGTTGTAAGAAAGTGGGAAGGGAAGCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | ACCCAGCATGCCTCTGATGCTCACAGCAGCCACCCCTaGTGTGCAGTTAGATACAAGCTGGGACAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TQHASDAHSSHP*CAVRYKLGQTA Trigger: TGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTGGCTGCTGTGAGCATCAGAGGCATGCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | GTCCTTTCTATCAAGAGCAGGAAGGCCTCTGCACACTaGAGGAAGGGCGTAACCACACCTCCACCTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VLSIKSRKASAH*RKGVTTPPPPL Trigger: GAGTGGAGGTGGAGGTGTGGTTACGCCCTTCCTGCAGTGTGCAGAGGCCTTCCTGCTCTTGATAGAAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TTCAGCCACAAGGCTCAGCAGCTACGTGTTGTGCACTaGTGTTGGTCGGGACAAGTGCTCGGTCAGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSHKAQQLRVVH*CWSGQVLGQEQ Trigger: TTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | AGACTCCGACTGCTCAGTCCACACATAAGCAGCAGTTaGCGTCTATGGTGGCGTGGCCTCTCTGCACTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RLRLLSPHISSS*RLWWRGLSALI Trigger: AATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGACTGAGCAGTCGGAGTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | GAAACCAAAGTTGCCTCTAACTGCGACCCTGGAATCTaGACTCTGGTGCTATGTGGCCTCCCCCTCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ETKVASNCDPGI*TLVLCGLPLPF Trigger: AAAGGGGAGGGGGAGGCCACATAGCACCAGAGTTCAGATTCCAGGGTCGCAGTTAGAGGCAACTTTGGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | TCTCCAAGCTTGCAGCCTCAAGATGAGTGGCCTTTCTaGGAGGCACATCAACAGCGTGACTTCGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPSLQPQDEWPF*EAHQQRDFEEQ Trigger: CTGCTCTTCGAAGTCACGCTGTTGATGTGCCTCGCAGAAAGGCCACTCATCTTGAGGCTGCAAGCTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | CTGCCTTGCCTCCTAAGTGCCAGGATTAAAGGCATGTaGCACTGCCAGGTGCTGAAAGGAATTCTGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPCLLSARIKGM*HCQVLKGILRG Trigger: ACCTCTCAGAATTCCTTTCAGCACCTGGCAGTGGCACATGCCTTTAATCCTGGCACTTAGGAGGCAAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | AGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTaGTCGGTCAGGAGCAAGAGCTTGATAATCCTACTC | + |
|
Preference number: 3 (lower is better) Translates to: SYVLCTGVGRDK*SVRSKSLIILL Trigger: GAGTAGGATTATCAAGCTCTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | GGAGAAATCAAAAGAAACATGAAAGACCACGAGCCTTaGGAGGGGAACGGAGGCAGCCAGAAGCACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GEIKRNMKDHEP*EGNGGSQKHRG Trigger: TCCTCTGTGCTTCTGGCTGCCTCCGTTCCCCTCGCAAGGCTCGTGGTCTTTCATGTTTCTTTTGATTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | AAGCCAGCATCTGAAAGCCAGCTGGGGGAATCCACCTaGCTCCGGATAACTCCCATTTGCATGAAGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: KPASESQLGEST*LRITPICMKHY Trigger: GTAATGCTTCATGCAAATGGGAGTTATCCGGAGGCAGGTGGATTCCCCCAGCTGGCTTTCAGATGCTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTCAATCATTATTGGCTTaGGCTTACACGTTAAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: RRLTAGSPASVCVFPPNSQSLLA*AYTLNS Trigger: GCTGTTTAACGTGTAAGCCAAAGCCAATAATGATTG...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTTCAGGTAGTTTAACATaGATTCTGGTAAGACAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RRLTAGSPASVCVFPPNSSGSLT*ILVRQL Trigger: CAGTTGTCTTACCAGAATCAATGTTAAACTACCTGA...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTGGCCCAAATCCTCATGCTaGCAAGGACATTGTCAACCG | + |
|
Preference number: 3 (lower is better) Translates to: FKMSLCVSSLRTHQSHGWPKSSC*QGHCQP Trigger: CGGTTGACAATGTCCTTGCAAGCATGAGGATTTGGG...CCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACATCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | GGTTCATCACTAACCCACCAGACTAGGCACACTACATaGCCTTCCTACCTTTTCCCTTCTGTACTGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GSSLTHQTRHTT*PSYLFPSVLGT Trigger: AGTCCCCAGTACAGAAGGGAAAAGGTAGGAAGGGCATGTAGTGTGCCTAGTCTGGTGGGTTAGTGATGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | CTCACTTCTCCTTTCCAAACCTCTCAGGCCAAGCTTTaGCGGACAGCTCCCTTACTACACACAGCACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSPFQTSQAKL*RTAPLLHTAHD Trigger: ATCATGTGCTGTGTGTAGTAAGGGAGCTGTCCGCCAAAGCTTGGCCTGAGAGGTTTGGAAAGGAGAAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TTAGGAAACACAGGCCAAGTTCACGGACTCGTTACATaGCTGCCGATGCTACCCAACACCACGGAAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGNTGQVHGLVT*LPMLPNTTEVK Trigger: CTTTACTTCCGTGGTGTTGGGTAGCATCGGCAGCCATGTAACGAGTCCGTGAACTTGGCCTGTGTTTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TGTGACAAGACCGTACACAAGACTCAGGGCTCACAATaGGGCAGAGGGAGATATGCTAATGGGAGGACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CDKTVHKTQGSQ*GRGRYANGRTN Trigger: GTTTGTCCTCCCATTAGCATATCTCCCTCTGCCCCATTGTGAGCCCTGAGTCTTGTGTACGGTCTTGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTGCTCTAGTGTCAGTAGAATaGTCAGGCTTCACTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PQGSAATCCALVLVGTSALVSVE*SGFTIL Trigger: CAAAATAGTGAAGCCTGACAATTCTACTGACACTAG...AGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCATGACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTTGGGGGACAACCTTCAATCATTATaGGCTTTGGCTTACACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CDHDPQSQQPSSTCVLGDNLQSL*ALAYTL Trigger: TAACGTGTAAGCCAAAGCCAATAATGATTGAAGGTT...GTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTCATGGTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCATTAAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DKRKSGVNKRHQSWTEASLNSGP*EEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTTAA...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGATGTCTTTGTGCGTCTCATCTCTCAGGACCCACCAGTCACACGGCTGGCAGAGGACAGTAAACTaGCTATTGGCCCAGGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FKMSLCVSSLRTHQSHGWQRTVN*LLAQGK Trigger: TTTTCCCTGGGCCAATAGCAAGTTTACTGTCCTCTG...CCAGCCGTGTGACTGGTGGGTCCTGAGAGATGAGACGCACAAAGACATCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | CAAGCTGGGACAGACAGCAAGCAGAAGGCCGGCTTGTaGCCTCAGTTTGGATTTGATCGATTCCAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: QAGTDSKQKAGL*PQFGFDRFQEI Trigger: TATTTCTTGGAATCGATCAAATCCAAACTGAGGGCACAAGCCGGCCTTCTGCTTGCTGTCTGTCCCAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | TACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTaGCATCTTTGTCATGAAGCCATAGATGAGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YGLAYFTQNPVS*HLCHEAIDEEG Trigger: CCCCTCCTCATCTATGGCTTCATGACAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR GCA 72 bp | ACACACACACACAGAGCTAAGTACAGAGATGCACAATaGATTTCCCACAGTGCCCATGAGCTAGGTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: THTHRAKYRDAQ*ISHSAHELGGK Trigger: CTTACCACCTAGCTCATGGGCACTGTGGGAAATGCATTGTGCATCTCTGTACTTAGCTCTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCATCCCAAGTTCTTGTCTaGAACTCACTATATTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DKRKSGVNKRHQSWTEASSQVLV*NSLYSR Trigger: CCTGGAATATAGTGAGTTCAAGACAAGAACTTGGGA...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | CATTTAACAGTTAGGCTCCAAGTCACTTCAATTCAGTaGCTCTTTTCCATGTACAGAGGACAACGCGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLTVRLQVTSIQ*LFSMYRGQRAC Trigger: GCAGGCGCGTTGTCCTCTGTACATGGAAAAGAGCCACTGAATTGAAGTGACTTGGAGCCTAACTGTTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | AATTACCTGTGCCTTCAACACCAGAGAGCTATCCTCTaGGCTTTCCAGATGCACTGGAGTTTCTTTGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: NYLCLQHQRAIL*AFQMHWSFFVM Trigger: CATCACAAAGAAACTCCAGTGCATCTGGAAAGCCCAGAGGATAGCTCTCTGGTGTTGAAGGCACAGGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | CTCACCAGATTTAGCACGGTCATCTTGACACTCGCGTaGAATGTGTATCAACGTTGCATGAGAACTACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTRFSTVILTLA*NVYQRCMRTTG Trigger: ACCAGTAGTTCTCATGCAACGTTGATACACATTCCACGCGAGTGTCAAGATGACCGTGCTAAATCTGGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGACTCACGTTTAACAAACCAGCTTCCCTTCCCACTTTCTTACAACGGCGAGCAAATACAGGCAATTaGACATTTCACCCCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SGLTFNKPASLPTFLQRRANTGN*TFHPLL Trigger: CAAAAGGGGGTGAAATGTCAAATTGCCTGTATTTGC...TCGCCGTTGTAAGAAAGTGGGAAGGGAAGCTGGTTTGTTAAACGTGAGTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGTACTGGTTTCTGTTTTaGAAACGGGAACTTATGATG | + |
|
Preference number: 3 (lower is better) Translates to: TLRTGRSVRLTRFSTVILYWFLF*KRELMM Trigger: CATCATAAGTTCCCGTTTCAAAAACAGAAACCAGTA...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | AATCCTACTCTGACTGACACCTTTATTTCTTGGTGCTaGGAACTGAACGCAGTCTTGTACGCTACGGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: NPTLTDTFISWC*ELNAVLYATAS Trigger: ACTAGCCGTAGCGTACAAGACTGCGTTCAGTTCTCAGCACCAAGAAATAAAGGTGTCAGTCAGAGTAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | GGCCACGTGGACAATGGACAACCCAACAGTCCAGTCTaGACAGACAGACAATTCTTTGTTAAAAACCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GHVDNGQPNSPV*TDRQFFVKNQT Trigger: TGTTTGGTTTTTAACAAAGAATTGTCTGTCTGTGCAGACTGGACTGTTGGGTTGTCCATTGTCCACGTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | ACCCCAAATAAACACAAACAAAAGTCGTGGGTCAAATaGACCCTCAAGCTCACCGTCCTTTCTATCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TPNKHKQKSWVK*TLKLTVLSIKS Trigger: GCTCTTGATAGAAAGGACGGTGAGCTTGAGGGTGCATTTGACCCACGACTTTTGTTTGTGTTTATTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TTAGAAAAGCAATGCAGTGCATTTTCAGCAATCGTATaGCCACAGACTCCGACTGCTCAGTCCACACATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEKQCSAFSAIV*PQTPTAQSTHK Trigger: CTTATGTGTGGACTGAGCAGTCGGAGTCTGTGGCCATACGATTGCTGAAAATGCACTGCATTGCTTTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | GGTTGTAAGACCCCAAATAAACACAAACAAAAGTCGTaGGTCAAATGCACCCTCAAGCTCACCGTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GCKTPNKHKQKS*VKCTLKLTVLS Trigger: AGAAAGGACGGTGAGCTTGAGGGTGCATTTGACCCACGACTTTTGTTTGTGTTTATTTGGGGTCTTACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | CTATTCAAGTCACATCAGCAGAGTTCAAGTTCTCAGTaGGCACACACACATACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: LFKSHQQSSSSQ*AHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGCTCACTGAGAACTTGAACTCTGCTGATGTGACTTGAATAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| 3UTR CCA 72 bp | TCTTTTATAGACAGTTGTGAGCCACCATGTGGTTGCTaGCAATTAAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFIDSCEPPCGC*QLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTTAATTGCCAGCAACCACATGGTGGCTCACAACTGTCTATAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CCA 72 bp | TGTGTGATTATTGGAAACCCAAACTCTTATTATCAGTaGGAACGGGAGGAGGGAAGGTCTTTGAAGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVIIGNPNSYYQ*EREEGRSLKPH Trigger: ATGAGGCTTCAAAGACCTTCCCTCCTCCCGTTCCCACTGATAATAAGAGTTTGGGTTTCCAATAATCACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | CAAGCAGAAGGCCGGCTTGTGCCCTCAGTTTGGATTTaGTCGATTCCAAGAAATAAACAAATTATTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QAEGRLVPSVWI*SIPRNKQIIPS Trigger: TGAGGGAATAATTTGTTTATTTCTTGGAATCGATCAAATCCAAACTGAGGGCACAAGCCGGCCTTCTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTTATTGGAAACCCAAACTCTTATTATCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*LLETQTLIISG Trigger: CCCACTGATAATAAGAGTTTGGGTTTCCAATAATCACACACACACACACACACACACACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTTCCCACCCAATTCTAAAATCCAGAAAGACTCCCAGCACTTCAGAGTCAGGCTTCACTATTTaGTTGCTAGTGATTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CVCSHPILKSRKTPSTSESGFTI*LLVIPK Trigger: TTTTGGAATCACTAGCAACAAAATAGTGAAGCCTGA...CTCTGAAGTGCTGGGAGTCTTTCTGGATTTTAGAATTGGGTGGGAACACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | CAGCCTCCCAAGTCGCTGGGATTATCAAGTTTAGAATaGAATTCTTTTGTTAGTCGCCTTGATTCTATGACG | + |
|
Preference number: 3 (lower is better) Translates to: QPPKSLGLSSLE*NSFVSRLDSMT Trigger: CGTCATAGAATCAAGGCGACTAACAAAAGAATTTCATTCTAAACTTGATAATCCCAGCGACTTGGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR GCA 72 bp | GCCATTCTTCAGTACTTCTCAGTCTCCTGTCTAAAATaGCTTCAGACTTCAAGAACCTCCTTCAACAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: AILQYFSVSCLK*LQTSRTSFNKF Trigger: AAATTTGTTGAAGGAGGTTCTTGAAGTCTGAAGGCATTTTAGACAGGAGACTGAGAAGTACTGAAGAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR TCA 72 bp | GAAGAAAGTAGAGAGACCCAAAATTTAATGTTAAGTTaGAGCAGAACTAAGACCAGCTGTCACTCATTAATA | + |
|
Preference number: 3 (lower is better) Translates to: EESRETQNLMLS*SRTKTSCHSLI Trigger: TATTAATGAGTGACAGCTGGTCTTAGTTCTGCTTCAACTTAACATTAAATTTTGGGTCTCTCTACTTTCTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | GACCCGCAAAGTCAGCAGCCCAGCAGCACATGTGTGTaGGGGGACGGGGATGGAGCCCAGGGCCACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: DPQSQQPSSTCV*GDGDGAQGHTH Trigger: ATGTGTGTGGCCCTGGGCTCCATCCCCGTCCCCCAACACACATGTGCTGCTGGGCTGCTGACTTTGCGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCCGCTGACCCAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCTGTGTCTGCACTGGGTaGAGCTTCTGGTTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESPLTQVALELGLRFPHSCVCTG*SFWFTG Trigger: TCCAGTGAACCAGAAGCTTCACCCAGTGCAGACACA...GGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTGGGTCAGCGGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCTGGCTGCTGGGGCTCTCCTCCCATCGGCTCTaGAGGGATGAAGGAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: QVALELGLRFPHSWLLGLSSHRL*RDEGIL Trigger: GAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGA...GAGCCCCAGCAGCCAGGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTTGGTCGGGACAAGTGCTGCCCGCTTCCGGGGCTaGCTTCTGGGAGAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PQGSAATCCALVLVGTSAARFRG*LLGEAL Trigger: TAAAGCTTCTCCCAGAAGGCAGCCCCGGAAGCGGGC...AGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | CGCCCTAGTGACACAGCCATTTCCAGCGGCGACTTCATAGAGGGCCCACGTGAGTGTGTCTGCACTGGGTaGAGCTTCTGGTTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSDTAISSGDFIEGPRECVCTG*SFWFTG Trigger: TCCAGTGAACCAGAAGCTTCACCCAGTGCAGACACA...CTCACGTGGGCCCTCTATGAAGTCGCCGCTGGAAATGGCTGTGTCACTAGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCCGCTGACCCAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCTCGGCTCTGCAGGGATaGAGGAATACTCAAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESPLTQVALELGLRFPHSSALQG*RNTQKL Trigger: CAACTTTTGAGTATTCCTTCATCCCTGCAGAGCCGA...GGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTGGGTCAGCGGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | CGCCCTAGTGACACAGCCATTTCCAGCGGCGACTTCATAGAGGGCCCACGTGAGTCCTCCCATCGGCTCTaGAGGGATGAAGGAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: RPSDTAISSGDFIEGPRESSHRL*RDEGIL Trigger: GAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGA...CTCACGTGGGCCCTCTATGAAGTCGCCGCTGGAAATGGCTGTGTCACTAGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR CAA 72 bp | CCACAAGGCTCAGCAGCTACGTGTTGTGCACTGGTGTaGGTCGGGACAAGTGCTCGGTCAGGAGCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGSAATCCALV*VGTSARSGARA Trigger: AGCTCTTGCTCCTGACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | AGGAAGGGTTCAGCCACAAGGCTCAGCAGCTACGTGTaGTGCACTGGTGTTGGTCGGGACAAGTGCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSATRLSSYV*CTGVGRDKCSV Trigger: GACCGAGCACTTGTCCCGACCAACACCAGTGCACAACACGTAGCTGCTGAGCCTTGTGGCTGAACCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | CAGACTCCGACTGCTCAGTCCACACATAAGCAGCAGTaGGCGTCTATGGTGGCGTGGCCTCTCTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTPTAQSTHKQQ*ASMVAWPLCTH Trigger: ATGAGTGCAGAGAGGCCACGCCACCATAGACGCCAACTGCTGCTTATGTGTGGACTGAGCAGTCGGAGTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGCCAGCTGGGGGAATCCACCTGCCTCCGGATAACTCCCATTTGCATGAAGGGAATACTCAAAAGTTaGCTGCCGCTGGGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESQLGESTCLRITPICMKGILKS*LPLGWH Trigger: GTGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCC...CTTCATGCAAATGGGAGTTATCCGGAGGCAGGTGGATTCCCCCAGCTGGCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | CACCCCTGCTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGTCCTCCCATCGGCTCTaGAGGGATGAAGGAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: HPCCAVRYKLGQTASRRPSSHRL*RDEGIL Trigger: GAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGA...CGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCCGCTGACCCAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCATGTCAACATCATTCTaGCTTGAGGTACCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESPLTQVALELGLRFPHSMSTSF*LEVPIS Trigger: AGAAATGGGTACCTCAAGTCAGAATGATGTTGACAT...GGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTGGGTCAGCGGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR TCA 90 bp | CCCATTTGCATGAAGCATTACTCAGTTTGGGGCCTGGCTCACCTCCCCCGCCCCCTCTTCTACTCTGCATaGTCTGATTCAAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PICMKHYSVWGLAHLPRPLFYSA*SDSKSP Trigger: AGGAGACTTTGAATCAGATCATGCAGAGTAGAAGAG...GGGGCGGGGGAGGTGAGCCAGGCCCCAAACTGAGTAATGCTTCATGCAAATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCTGGCTGCTGGGGCTCCATCCTGGAATACATTaGCGTTCAAATCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVALELGLRFPHSWLLGLHPGIH*RSNLCS Trigger: ACTACAAAGATTTGAACGGCAATGTATTCCAGGATG...GAGCCCCAGCAGCCAGGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | AGGTACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTGCCATCTTTGTCATGCCCGCTTCCGGGGCTaGCTTCTGGGAGAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RYGLAYFTQNPVSCHLCHARFRG*LLGEAL Trigger: TAAAGCTTCTCCCAGAAGGCAGCCCCGGAAGCGGGC...ATGACAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAGAGATGCCGGGTTTCCTGGGAACACTCCAGCCAGACACAAAACACAACAGCGCCTCTCTCTTTCTaGGCTCATCAGATCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: CKRCRVSWEHSSQTQNTTAPLSF*AHQIPP Trigger: CGGTGGGATCTGATGAGCGCAGAAAGAGAGAGGCGC...TGTTGTGTTTTGTGTCTGGCTGGAGTGTTCCCAGGAAACCCGGCATCTCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| 3UTR CAA 72 bp | GGGGCAGAAGGCAACCCATCAGAGAAGAAACCAAAGTaGCCTCTAACTGCGACCCTGGAATCTGAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEGNPSEKKPK*PLTATLESELW Trigger: CCAGAGTTCAGATTCCAGGGTCGCAGTTAGAGGCAACTTTGGTTTCTTCTCTGATGGGTTGCCTTCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | TGCCTTCCCCATCAGCTGTTAACAGTGGGATGCACCTaGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLPHQLLTVGCT*RTGRSVRLTRF Trigger: AAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGTGCATCCCACTGTTAACAGCTGATGGGGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCATGTGTCTGCACTGGGTaGAGCTTCTGGTTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKRKSGVNKRHQSWTEASCVCTG*SFWFTG Trigger: TCCAGTGAACCAGAAGCTTCACCCAGTGCAGACACA...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTTGCATGAAGCATTACTCAGTTTGGGGCCTGGCTCACCTCCCCCGCCCCCTTCTGCCAAATCTGTaGGTTCATCTTCTTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PICMKHYSVWGLAHLPRPLLPNL*VHLLLL Trigger: AAGTAGAAGAAGATGAACCCACAGATTTGGCAGAAG...GGGGCGGGGGAGGTGAGCCAGGCCCCAAACTGAGTAATGCTTCATGCAAATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR CCA 90 bp | CGCCCTAGTGACACAGCCATTTCCAGCGGCGACTTCATAGAGGGCCCACGTGAGTTGAAGACAGCATCCTaGAATACATTGCCGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSDTAISSGDFIEGPRELKTAS*NTLPFK Trigger: TTTGAACGGCAATGTATTCCAGGATGCTGTCTTCAA...CTCACGTGGGCCCTCTATGAAGTCGCCGCTGGAAATGGCTGTGTCACTAGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTAAGAGATGCCGGGTTTCCTGGGAACACTCCAGCCAGACACAAAACACAATCCGGGGCTGCCTTCTaGGAGAAGCTTTATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVRDAGFPGNTPARHKTQSGAAF*EKLYLF Trigger: GAAGAGATAAAGCTTCTCCCAGAAGGCAGCCCCGGA...TTGTGTTTTGTGTCTGGCTGGAGTGTTCCCAGGAAACCCGGCATCTCTTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| CDS-3UTR TCA 90 bp | CGGCGACTGACTGCAGGGTCCCCAGCCTCAGTGTGTGTGTTCCCACCCAATTCTAACATCATTCTGACTTaGGGTACCCATTTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLTAGSPASVCVFPPNSNIILT*GTHFYF Trigger: AAAGTAGAAATGGGTACCTCAAGTCAGAATGATGTT...AGAATTGGGTGGGAACACACACACTGAGGCTGGGGACCCTGCAGTCAGTCGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGAGGCCTCTTGTAAGCCCAGCCTGTAGACACTCATCAGTGAATATTTCTAGACCACCGGATGGCTaGGCTGCAGGGTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMRPLVSPACRHSSVNISRPPDG*AAGSPQ Trigger: CTGAGGAGACCCTGCAGCTCAGCCATCCGGTGGTCT...AGAAATATTCACTGATGAGTGTCTACAGGCTGGGCTTACAAGAGGCCTCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTCACGTTTAACAAACCAGCTTCCCTTCCCACTTTCTTACAACGGCGAGGAATACTCAAAAGTTaGCTGCCGCTGGGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLTFNKPASLPTFLQRRGILKS*LPLGWH Trigger: GTGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCC...TCGCCGTTGTAAGAAAGTGGGAAGGGAAGCTGGTTTGTTAAACGTGAGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGTACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTGCCATCTTTGGGAATACTCAAAAGTTaGCTGCCGCTGGGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEVRASLLHTESCLLPSLGILKS*LPLGWH Trigger: GTGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCC...CAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTACCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAAGAGGTACGGCCTGAGACCACCGGATaGCTGAGCTGCAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQMVMEAAELCSVKEVRPETTG*LSCRVS Trigger: GGAGACCCTGCAGCTCAGCCATCCGGTGGTCTCAGG...CCGTACCTCTTTGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225319.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGTCGGCTCTGCAGGGATaGAGGAATACTCAAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRTGRSVRLTRFSTVILSALQG*RNTQKL Trigger: CAACTTTTGAGTATTCCTTCATCCCTGCAGAGCCGA...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTCACGTTTAACAAACCAGCTTCCCTTCCCACTTTCTTACAACGGCGATACTCAAAAGTTGCCTaGCGCTGGGGTGGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: SGLTFNKPASLPTFLQRRYSKVA*RWGGTT Trigger: TGTAGTGCCACCCCAGCGGCAGGCAACTTTTGAGTA...TCGCCGTTGTAAGAAAGTGGGAAGGGAAGCTGGTTTGTTAAACGTGAGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCTGCTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGTTGAAGACAGCATCCTaGAATACATTGCCGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HPCCAVRYKLGQTASRRPLKTAS*NTLPFK Trigger: TTTGAACGGCAATGTATTCCAGGATGCTGTCTTCAA...CGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | ATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGGCTaGTGCCCTCAGTTTGGATTTGATCGATTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQAGTDSKQKAG*CPQFGFDRFQE Trigger: TTCTTGGAATCGATCAAATCCAAACTGAGGGCACAAGCCGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | AGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTaGACACTCGCGTGGAATGTGTATCAACGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVRLTRFSTVI*TLAWNVYQRCM Trigger: CATGCAACGTTGATACACATTCCACGCGAGTGTCAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | TCTTATTATCAGTGGGAACGGGAGGAGGGAAGGTCTTaGAAGCCTCATGTGTCTTTTGTGACCATGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SYYQWEREEGRS*KPHVSFVTMTR Trigger: GCGGGTCATGGTCACAAAAGACACATGAGGCTTCAAAGACCTTCCCTCCTCCCGTTCCCACTGATAATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | CCGAAAGCATTAGTGATAAAGCCACATTCTCCAAGCTaGCAGCCTCAAGATGAGTGGCCTTTCTGCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKALVIKPHSPS*QPQDEWPFCEA Trigger: TGCCTCGCAGAAAGGCCACTCATCTTGAGGCTGCAAGCTTGGAGAATGTGGCTTTATCACTAATGCTTTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAAGAGGTACGGGCTTACTCAAAAGTTGCCTaGCGCTGGGGTGGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: LQMVMEAAELCSVKEVRAYSKVA*RWGGTT Trigger: TGTAGTGCCACCCCAGCGGCAGGCAACTTTTGAGTA...AGCCCGTACCTCTTTGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR TCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCAATGTCAACATCATTCTaGCTTGAGGTACCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKRKSGVNKRHQSWTEASMSTSF*LEVPIS Trigger: AGAAATGGGTACCTCAAGTCAGAATGATGTTGACAT...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTAAGAGATGCCGGGTTTCCTGGGAACACTCCAGCCAGACACAAAACACAAATGTCAACATCATTCTaGCTTGAGGTACCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRDAGFPGNTPARHKTQMSTSF*LEVPIS Trigger: AGAAATGGGTACCTCAAGTCAGAATGATGTTGACAT...TTGTGTTTTGTGTCTGGCTGGAGTGTTCCCAGGAAACCCGGCATCTCTTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCACTTCACGATGTTGTTTaGCGGAAAATCTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DKRKSGVNKRHQSWTEASLHDVV*RKIFSF Trigger: AAAGGAGAAGATTTTCCGGCAAACAACATCGTGAAG...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGCTTCTGCCAAATCTGTaGGTTCATCTTCTTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTGRSVRLTRFSTVILLLPNL*VHLLLL Trigger: AAGTAGAAGAAGATGAACCCACAGATTTGGCAGAAG...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| 3UTR CAA 72 bp | GCAGACATCAATACAATTAATGCCCTGAACCAACTATaGCTCAGCTACCTGCAACTGCTGAGTCCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADINTINALNQL*LSYLQLLSPVH Trigger: GTGCACAGGACTCAGCAGTTGCAGGTAGCTGAGCAATAGTTGGTTCAGGGCATTAATTGTATTGATGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTGAGAACAGGGAGGAGTGTCAGGCTCACCAGATTTAGCACGGTCATCTTGCATCCTGGAATACATTaGCGTTCAAATCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTGRSVRLTRFSTVILHPGIH*RSNLCS Trigger: ACTACAAAGATTTGAACGGCAATGTATTCCAGGATG...CAAGATGACCGTGCTAAATCTGGTGAGCCTGACACTCCTCCCTGTTCTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTGCCATCTTTGTCATCTTCACGATGTTGTTTaGCGGAAAATCTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYGLAYFTQNPVSCHLCHLHDVV*RKIFSF Trigger: AAAGGAGAAGATTTTCCGGCAAACAACATCGTGAAG...ATGACAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGTACGGGCTAGCTTACTTCACACAGAATCCTGTCTCCTGCCATCTTTGAACATCATTCTGACTTaGGGTACCCATTTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEVRASLLHTESCLLPSLNIILT*GTHFYF Trigger: AAAGTAGAAATGGGTACCTCAAGTCAGAATGATGTT...CAAAGATGGCAGGAGACAGGATTCTGTGTGAAGTAAGCTAGCCCGTACCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR CAA 72 bp | AAGACTCCCAGCACTTCAGAGAGAATCAGTCTAGTTTaGTGTAAAGGAAAAAGGGACAGAACCAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KTPSTSERISLV*CKGKRDRTKQT Trigger: TGTCTGCTTGGTTCTGTCCCTTTTTCCTTTACACAAAACTAGACTGATTCTCTCTGAAGTGCTGGGAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAAGAGGTACGGCTTCACGATGTTGTTTaGCGGAAAATCTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMVMEAAELCSVKEVRLHDVV*RKIFSF Trigger: AAAGGAGAAGATTTTCCGGCAAACAACATCGTGAAG...CCGTACCTCTTTGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGAGGCCTCTTGTAAGCCCAGCCTGTAGACACTCATCAGTGAATATTTCTCATCCTGGAATACATTaGCGTTCAAATCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMRPLVSPACRHSSVNISHPGIH*RSNLCS Trigger: ACTACAAAGATTTGAACGGCAATGTATTCCAGGATG...AGAAATATTCACTGATGAGTGTCTACAGGCTGGGCTTACAAGAGGCCTCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAAGAGGTACTTCTGCCAAATCTGTaGGTTCATCTTCTTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLQMVMEAAELCSVKEVLLPNL*VHLLLL Trigger: AAGTAGAAGAAGATGAACCCACAGATTTGGCAGAAG...TACCTCTTTGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR CAA 72 bp | CTAGTGTCAGTAGAATTGTCAGGCTTCACTATTTTGTaGCTAGTGATTCCAAAATTCCTTGACTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSVELSGFTIL*LVIPKFLDSIV Trigger: AACAATGGAGTCAAGGAATTTTGGAATCACTAGCAACAAAATAGTGAAGCCTGACAATTCTACTGACACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGTGAATATTTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAACATCATTCTGACTTaGGGTACCCATTTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISEYFFKWSWKLLSYVQSNIILT*GTHFYF Trigger: AAAGTAGAAATGGGTACCTCAAGTCAGAATGATGTT...TGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAAATATTCACTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
||
| 3UTR CAA 72 bp | ATACTAGTGTCAGTAGAATTGTCAGGCTTCACTATTTaGTTGCTAGTGATTCCAAAATTCCTTGACTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILVSVELSGFTI*LLVIPKFLDSI Trigger: AATGGAGTCAAGGAATTTTGGAATCACTAGCAACAAAATAGTGAAGCCTGACAATTCTACTGACACTAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
||
| CDS GCA 90 bp | CGCGCCTCTCTCTTTCTGCGCTCATCAGATCCCACCGATCGCTTCTaGGCCCGCTTCCGGGGCTGCCTTCTGGGAGAAGCTTTATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASLFLRSSDPTDRF*ARFRGCLLGEALSL Trigger: AAGAGATAAAGCTTCTCCCAGAAGGCAGCCCCGGAAGCGGGCGCAGAAGCGATCGGTGGGATCTGATGAGCGCAGAAAGAGAGAGGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAGGGGACATGAGAGCCCGCTGACCCAAGTGGCCCTAGAGCTGGGCCTGTTCTGTATGGGTCTCTaGCGCTTTCTAGATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MRRGHESPLTQVALELGLFCMGL*RFLDSR Trigger: CCTGGAATCTAGAAAGCGCAAGAGACCCATACAGAA...CAGGCCCAGCTCTAGGGCCACTTGGGTCAGCGGGCTCTCATGTCCCCTCCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCCCGCTGACCCAAGTGGCCCTAGAGCTGGGCCTGAGGTTTCCCCATTCCACTTCACGATGTTGTTaGCCGGAAAATCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ESPLTQVALELGLRFPHSTSRCC*PENLLL Trigger: AAGGAGAAGATTTTCCGGCAAACAACATCGTGAAGT...GGAATGGGGAAACCTCAGGCCCAGCTCTAGGGCCACTTGGGTCAGCGGGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | CGCCCTAGTGACACAGCCATTTCCAGCGGCGACTTCATAGAGGGCCCACGTGAGTTCTGTATGGGTCTCTaGCGCTTTCTAGATTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RPSDTAISSGDFIEGPREFCMGL*RFLDSR Trigger: CCTGGAATCTAGAAAGCGCAAGAGACCCATACAGAA...CTCACGTGGGCCCTCTATGAAGTCGCCGCTGGAAATGGCTGTGTCACTAGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS GCA 90 bp | GTTCAGATTGATAACCAGACCAAAGGGTCGTCCTCCCATCGGCTCTaGAGGGATGAAGGAATACTCAAAAGTTGCCTGCCGCTGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VQIDNQTKGSSSHRL*RDEGILKSCLPLGW Trigger: CCACCCCAGCGGCAGGCAACTTTTGAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGACGACCCTTTGGTCTGGTTATCAATCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021864.8 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | CTAGGCACACTACATGCCCTTCCTACCTTTTCCCTTCTGTACTGGGGACTGAGCAGGAATACTCAAAAGTaGCCTGCCGCTGGGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LGTLHALPTFSLLYWGLSRNTQK*PAAGVA Trigger: TGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCCT...GCTCAGTCCCCAGTACAGAAGGGAAAAGGTAGGAAGGGCATGTAGTGTGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS-3UTR CAA 90 bp | AAGAGATGCCGGGTTTCCTGGGAACACTCCAGCCAGACACAAAACACAACAGCTAGGAATACTCAAAAGTaGCCTGCCGCTGGGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: KRCRVSWEHSSQTQNTTARNTQK*PAAGVA Trigger: TGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCCT...AGCTGTTGTGTTTTGTGTCTGGCTGGAGTGTTCCCAGGAAACCCGGCATCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | CACCCCTGCTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGTTCTGTATGGGTCTCTaGCGCTTTCTAGATTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: HPCCAVRYKLGQTASRRPFCMGL*RFLDSR Trigger: CCTGGAATCTAGAAAGCGCAAGAGACCCATACAGAA...CGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS-3UTR CAA 90 bp | GAAACTACCCAGCATGCCTCTGATGCTCACAGCAGCCACCCCTGCTGTGCAGTTAAATCTTCTGTCCCCTaGTTTGTAAAGCCAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: ETTQHASDAHSSHPCCAVKSSVP*FVKPTR Trigger: CCTGGTTGGCTTTACAAACAAGGGGACAGAAGATTT...AACTGCACAGCAGGGGTGGCTGCTGTGAGCATCAGAGGCATGCTGGGTAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS-3UTR CAA 90 bp | CACCCCTGCTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGACTTCACGATGTTGTTaGCCGGAAAATCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HPCCAVRYKLGQTASRRPTSRCC*PENLLL Trigger: AAGGAGAAGATTTTCCGGCAAACAACATCGTGAAGT...CGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTTTATGAGGCCTCTTGTAAGCCCAGCCTGTAGACACTCATCAGTGAATAGGAATACTCAAAAGTaGCCTGCCGCTGGGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QPFMRPLVSPACRHSSVNRNTQK*PAAGVA Trigger: TGCCACCCCAGCGGCAGGCAACTTTTGAGTATTCCT...ATTCACTGATGAGTGTCTACAGGCTGGGCTTACAAGAGGCCTCATAAAGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCCAGCTGGGGGAATCCACCTGCCTCCGGATAACTCCCATTTGCATGAAGAGGAACTTCACGATGTaGTTTGCCGGAAAATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ESQLGESTCLRITPICMKRNFTM*FAGKSS Trigger: AGAAGATTTTCCGGCAAACAACATCGTGAAGTTCCT...CTTCATGCAAATGGGAGTTATCCGGAGGCAGGTGGATTCCCCCAGCTGGCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | CACCCCTGCTGTGCAGTTAGATACAAGCTGGGACAGACAGCAAGCAGAAGGCCGCAACATCATTCTGACTaGAGGTACCCATTTCTACTT | + |
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Preference number: 5 (lower is better) Translates to: HPCCAVRYKLGQTASRRPQHHSD*RYPFLL Trigger: AAGTAGAAATGGGTACCTCAAGTCAGAATGATGTTG...CGGCCTTCTGCTTGCTGTCTGTCCCAGCTTGTATCTAACTGCACAGCAGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS TCA 90 bp | TCAATTATTGAATCTTCCACTATTTCTTCATCTTCTGTAGGATCTTaGGCCAAAGCTAATGACCCTCCGGGGCCGCCTCGGAGCAGCACG | + |
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Preference number: 5 (lower is better) Translates to: SIIESSTISSSSVGS*AKANDPPGPPRSST Trigger: CGTGCTGCTCCGAGGCGGCCCCGGAGGGTCATTAGCTTTGGCTCAAGATCCTACAGAAGATGAAGAAATAGTGGAAGATTCAATAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021864.8 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | GATAAAAGGAAGTCGGGTGTCAATAAGCGACACCAGAGCTGGACAGAGGCCTCAAGGAACTTCACGATGTaGTTTGCCGGAAAATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DKRKSGVNKRHQSWTEASRNFTM*FAGKSS Trigger: AGAAGATTTTCCGGCAAACAACATCGTGAAGTTCCT...TGAGGCCTCTGTCCAGCTCTGGTGTCGCTTATTGACACCCGACTTCCTTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021864.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTTTATGAGGCCTCTTGTAAGCCCAGCCTGTAGACACTCATCAGTGAATAAATCTTCTGTCCCCTaGTTTGTAAAGCCAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: QPFMRPLVSPACRHSSVNKSSVP*FVKPTR Trigger: CCTGGTTGGCTTTACAAACAAGGGGACAGAAGATTT...ATTCACTGATGAGTGTCTACAGGCTGGGCTTACAAGAGGCCTCATAAAGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | AAGAGATGCCGGGTTTCCTGGGAACACTCCAGCCAGACACAAAACACAACAGCTCAACATCATTCTGACTaGAGGTACCCATTTCTACTT | + |
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Preference number: 5 (lower is better) Translates to: KRCRVSWEHSSQTQNTTAQHHSD*RYPFLL Trigger: AAGTAGAAATGGGTACCTCAAGTCAGAATGATGTTG...AGCTGTTGTGTTTTGTGTCTGGCTGGAGTGTTCCCAGGAAACCCGGCATCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | TTTATGAGGCCTCTTGTAAGCCCAGCCTGTAGACACTCATCAGTGAATATTTCTAAATCTTCTGTCCCCTaGTTTGTAAAGCCAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FMRPLVSPACRHSSVNISKSSVP*FVKPTR Trigger: CCTGGTTGGCTTTACAAACAAGGGGACAGAAGATTT...AGAAATATTCACTGATGAGTGTCTACAGGCTGGGCTTACAAGAGGCCTCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAATGGTCATGGAAGCTGCTGAGTTATGTTCAGTCAAAGAGGTACGGGCAACATCATTCTGACTaGAGGTACCCATTTCTACTT | + |
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Preference number: 5 (lower is better) Translates to: FFKWSWKLLSYVQSKRYGQHHSD*RYPFLL Trigger: AAGTAGAAATGGGTACCTCAAGTCAGAATGATGTTG...CCCGTACCTCTTTGACTGAACATAACTCAGCAGCTTCCATGACCATTTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS-3UTR CAA 90 bp | ATTCAAAGCAATTCTATTCAAGTCACATCAGCAGAGTTCAAGTTCTCAGTGAGCACTTCACGATGTTGTTaGCCGGAAAATCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: IQSNSIQVTSAEFKFSVSTSRCC*PENLLL Trigger: AAGGAGAAGATTTTCCGGCAAACAACATCGTGAAGT...GCTCACTGAGAACTTGAACTCTGCTGATGTGACTTGAATAGAATTGCTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
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| CDS GCA 72 bp | CTCTTTCTGCGCTCATCAGATCCCACCGATCGCTTCTaGGCCCGCTTCCGGGGCTGCCTTCTGGGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LFLRSSDPTDRF*ARFRGCLLGEA Trigger: AGCTTCTCCCAGAAGGCAGCCCCGGAAGCGGGCGCAGAAGCGATCGGTGGGATCTGATGAGCGCAGAAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225246.2 |
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| CDS GCA 72 bp | ACACATCTTGCACCTGAGACCACCGGATGGCTGAGCTaGAGGGTCTCCTCAGCGCGCCTCTCTCTTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: THLAPETTGWLS*RVSSARLSLSA Trigger: CGCAGAAAGAGAGAGGCGCGCTGAGGAGACCCTGCAGCTCAGCCATCCGGTGGTCTCAGGTGCAAGATGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225319.2 |
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| CDS CCA 72 bp | CTGAAGCAGACACATCTTGCACCTGAGACCACCGGATaGCTGAGCTGCAGGGTCTCCTCAGCGCGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LKQTHLAPETTG*LSCRVSSARLS Trigger: AGAGAGGCGCGCTGAGGAGACCCTGCAGCTCAGCCATCCGGTGGTCTCAGGTGCAAGATGTGTCTGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225319.2 |
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| CDS TCA 72 bp | GACCAAAGGGTCGTCCTCCCATCGGCTCTGCAGGGATaGAGGAATACTCAAAAGTTGCCTGCCGCTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: DQRVVLPSALQG*RNTQKLPAAGV Trigger: CACCCCAGCGGCAGGCAACTTTTGAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGACGACCCTTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021864.8 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS GCA 72 bp | GATAACCAGACCAAAGGGTCGTCCTCCCATCGGCTCTaGAGGGATGAAGGAATACTCAAAAGTTGCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: DNQTKGSSSHRL*RDEGILKSCLP Trigger: CGGCAGGCAACTTTTGAGTATTCCTTCATCCCTGCAGAGCCGATGGGAGGACGACCCTTTGGTCTGGTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021864.8 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS TCA 72 bp | GAATCTTCCACTATTTCTTCATCTTCTGTAGGATCTTaGGCCAAAGCTAATGACCCTCCGGGGCCGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ESSTISSSSVGS*AKANDPPGPPR Trigger: CCGAGGCGGCCCCGGAGGGTCATTAGCTTTGGCTCAAGATCCTACAGAAGATGAAGAAATAGTGGAAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021864.8 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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| CDS TCA 72 bp | TCCTTTTACAAACAGAATAGTTGTGTCTGCACTGGGTaGAGCTTCTGGTTCACTGGATACATCCTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFYKQNSCVCTG*SFWFTGYILLF Trigger: GAAGAGGAGGATGTATCCAGTGAACCAGAAGCTTCACCCAGTGCAGACACAACTATTCTGTTTGTAAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021864.8 ENSMUST00000224399.2 ENSMUST00000225246.2 ENSMUST00000225319.2 |
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