Pregenerated sensors for SSPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030255Ensembl transcript IDs: ENSMUST00000032383.14, ENSMUST00000111701.2, ENSMUST00000111702.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGGGGGAGGAAGGGCTTTGCAAACCTCTCCGTTCTACAGTTTaGAAGGCACAAGGCACAGTCACCGTTCCGTCCTGGCTCTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RLGEEGLCKPLRSTV*KAQGTVTVPSWLCD Trigger: GTCACAGAGCCAGGACGGAACGGTGACTGTGCCTTGTGCCTTCCAAACTGTAGAACGGAGAGGTTTGCAAAGCCCTTCCTCCCCCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR GCA 90 bp | AGATGGCTGGTGAAGGAGCCCCAGGGATCTGCCTGTCTCTGCCTCTaGAATGCCAGGATCACAAGCACACACCTGTGCCTGGCTGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: RWLVKEPQGSACLCL*NARITSTHLCLAVL Trigger: TAAAACAGCCAGGCACAGGTGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGCAGATCCCTGGGGCTCCTTCACCAGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR GCA 90 bp | CCAGCATATCGTAAGCTCCCAGCACAGGGTCCTGCCACCCGGCTCTaGTCCTTCTCTTCACTTACAGTGCCTCCTCCTCTTTGGGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: PAYRKLPAQGPATRL*SFSSLTVPPPLWEV Trigger: AACTTCCCAAAGAGGAGGAGGCACTGTAAGTGAAGAGAAGGAGCAGAGCCGGGTGGCAGGACCCTGTGCTGGGAGCTTACGATATGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CCA 90 bp | GTCTCTGCCTCTGCAATGCCAGGATCACAAGCACACACCTGTGCCTaGCTGTTTTACATGGGATCAGGTTCTTACTGGGATGGCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: VSASAMPGSQAHTCA*LFYMGSGSYWDGKD Trigger: GTCCTTGCCATCCCAGTAAGAACCTGATCCCATGTAAAACAGCCAGGCACAGGTGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR GCA 90 bp | TTAATCACTACACTAAAGATGGCTGGTGAAGGAGCCCCAGGGATCTaGCTGTCTCTGCCTCTGCAATGCCAGGATCACAAGCACACACCT | + |
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Preference number: 1 (lower is better) Translates to: LITTLKMAGEGAPGI*LSLPLQCQDHKHTP Trigger: AGGTGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGCAGATCCCTGGGGCTCCTTCACCAGCCATCTTTAGTGTAGTGATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR GCA 90 bp | CTAGGGCTTTGGAGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTaGCTATACCAATTTGGATGGAGCTCGGAGCCACAAAGGTCACAT | + |
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Preference number: 1 (lower is better) Translates to: LGLWSSYGLGMAPRC*LYQFGWSSEPQRSH Trigger: ATGTGACCTTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACTCCAAAGCCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR TCA 90 bp | AGATCTGAGCTCTCAATCCAAAGACGGGGCGTGAGGCCTGTTACTTaGCTACAGTTTCTAGGGCTTTGGAGTAGCTACGGTTTAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: RSELSIQRRGVRPVT*LQFLGLWSSYGLGM Trigger: CATGCCTAAACCGTAGCTACTCCAAAGCCCTAGAAACTGTAGTCAAGTAACAGGCCTCACGCCCCGTCTTTGGATTGAGAGCTCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR GCA 90 bp | TTTCTAGGGCTTTGGAGTAGCTACGGTTTAGGCATGGCTCCAAGATaGTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: FLGLWSSYGLGMAPR*CLYQFGWSSEPQRS Trigger: TGACCTTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACTCCAAAGCCCTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CCA 90 bp | TACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATaGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTG | + |
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Preference number: 1 (lower is better) Translates to: YGLGMAPRCCLYQFG*SSEPQRSHKDTDPL Trigger: CAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CCA 90 bp | CAATGCCAGGATCACAAGCACACACCTGTGCCTGGCTGTTTTACATaGGATCAGGTTCTTACTGGGATGGCAAGGACTTTGATAACTGAG | + |
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Preference number: 1 (lower is better) Translates to: QCQDHKHTPVPGCFT*DQVLTGMARTLITE Trigger: CTCAGTTATCAAAGTCCTTGCCATCCCAGTAAGAACCTGATCCCATGTAAAACAGCCAGGCACAGGTGTGTGCTTGTGATCCTGGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR TCA 90 bp | TATTCCTATTCCAAGTACTGCCAAGCCCTGGCCGTTTCTCCTCTTTaGAAAGTCTTGATTCATTTAATTCTCCTGAAGGAGGCTGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: YSYSKYCQALAVSPL*KVLIHLILLKEAGG Trigger: TCCCCCAGCCTCCTTCAGGAGAATTAAATGAATCAAGACTTTTCAAAGAGGAGAAACGGCCAGGGCTTGGCAGTACTTGGAATAGGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR TCA 90 bp | AGCACCATATGCAGACTCATAATTCTGAGAGGGGCAGTGCTCACTTaGGACAAGAAAATGAGAAGACACGAATCCATTTCAGTGGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: STICRLIILRGAVLT*DKKMRRHESISVAY Trigger: GTAAGCCACTGAAATGGATTCGTGTCTTCTCATTTTCTTGTCTCAAGTGAGCACTGCCCCTCTCAGAATTATGAGTCTGCATATGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR TCA 90 bp | CACACAGAAGTGAGGGAGCATCAAGAGATCCTCATGTCTTGGATGTaGATAGAAAAACATATAGAATGGAGTGTCGCTGTAGGAACACAC | + |
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Preference number: 1 (lower is better) Translates to: HTEVREHQEILMSWM*IEKHIEWSVAVGTH Trigger: GTGTGTTCCTACAGCGACACTCCATTCTATATGTTTTTCTATTCACATCCAAGACATGAGGATCTCTTGATGCTCCCTCACTTCTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CCA 90 bp | GTAGTCACCAGGAAATATGAAGACACCGTTCATGACTGCAAATGGTaGACAGCTTTCAAGGTTATTTCTAATCATCTTTCAGTGGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: VVTRKYEDTVHDCKW*TAFKVISNHLSVAP Trigger: AGGGGCCACTGAAAGATGATTAGAAATAACCTTGAAAGCTGTCCACCATTTGCAGTCATGAACGGTGTCTTCATATTTCCTGGTGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCTCCAGCAGGGCTGGGTaGACAGTAACAGGCGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLSSRAG*TVTGVK Trigger: TTTCACGCCTGTTACTGTGCACCCAGCCCTGCTGGA...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGCCCAGCACAGGGTCCTaGCACCCGGCTCTGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWPSTGS*HPALLL Trigger: AAGGAGCAGAGCCGGGTGGCAGGACCCTGTGCTGGG...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CAA 90 bp | CAGCAGGGCTGGGTGCACAGTAACAGGCGTGAAAACAGCGTCACTTaGAAAGGACAGCCCGTGACATCCTGGATTCTCTACCATGTACCA | + |
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Preference number: 2 (lower is better) Translates to: QQGWVHSNRRENSVT*KGQPVTSWILYHVP Trigger: TGGTACATGGTAGAGAATCCAGGATGTCACGGGCTGTCCTTTCAAAGTGACGCTGTTTTCACGCCTGTTACTGTGCACCCAGCCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAGGATCTGCCTGTCTCTaGCTCTGCAATGCCAGGATC | + |
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Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKGSACL*LCNARI Trigger: GATCCTGGCATTGCAGAGGCAGAGACAGGCAGATCC...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAAAGGCATTCTGTGTGTaGTTCCAGCAGGGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKKAFCV*FQQGWV Trigger: CACCCAGCCCTGCTGGAAGCACACACAGAATGCCTT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR CCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAATTCACACCATCGCACTaGACTAACGGGAAGGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKFTPSH*TNGKAE Trigger: CTCCGCCTTCCCGTTAGTCCAGTGCGATGGTGTGAA...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCGCACACACCTGTGCCTaGCTGTTTTACATGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLAHTCA*LFYMGS Trigger: TGATCCCATGTAAAACAGCCAGGCACAGGTGTGTGC...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CAA 90 bp | TCACCGTTCCGTCCTGGCTCTGTGACAGATTTGAAGTGTGACATTTaGCTAAGTGAGAAGCTGTGTGCCCGCTCCTTCTCTGCTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SPFRPGSVTDLKCDI*LSEKLCARSFSAAL Trigger: AAGGGCAGCAGAGAAGGAGCGGGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCCAGGACGGAACGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAAGGCAACCGGAAGTCTaGACCCCAGCCCAGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RNTLEGTQKRRSELSIQRRQPEV*TPAQVF Trigger: GAACACCTGGGCTGGGGTGCAGACTTCCGGTTGCCT...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCCCCATCAAAGGTACTTaGTGGTCCTGGGAGATACTT | + |
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Preference number: 2 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLPIKGT*WSWEIL Trigger: AAGTATCTCCCAGGACCACCAAGTACCTTTGATGGG...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGACTAAAGATGGCTGGTaGAGGAGCCCCAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWTKDGW*RSPRDL Trigger: CAGATCCCTGGGGCTCCTTCACCAGCCATCTTTAGT...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAACAAGCACACACCTGTaGCTGGCTGTTTTACATGGG | + |
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Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKTSTHL*LAVLHG Trigger: CCCATGTAAAACAGCCAGGCACAGGTGTGTGCTTGT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGGCCTGTCTCTGCCTCTaGAATGCCAGGATCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWACLCL*NARITS Trigger: GCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGC...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAACTAAAGATGGCTGGTaGAGGAGCCCCAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKTKDGW*RSPRDL Trigger: CAGATCCCTGGGGCTCCTTCACCAGCCATCTTTAGT...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAACTAAAGATGGCTGGTaGAGGAGCCCCAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: RNTLEGTQKRRSELSIQRTKDGW*RSPRDL Trigger: CAGATCCCTGGGGCTCCTTCACCAGCCATCTTTAGT...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGCCTGTCTCTGCCTCTaGAATGCCAGGATCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKACLCL*NARITS Trigger: GCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGC...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAATCCAGCAGGGCTGGGTaGACAGTAACAGGCGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKSSRAG*TVTGVK Trigger: TTTCACGCCTGTTACTGTGCACCCAGCCCTGCTGGA...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGGGGGAGGAAGGGCTTTaGAAACCTCTCCGTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWGEEGL*KPLRST Trigger: TGTAGAACGGAGAGGTTTGCAAAGCCCTTCCTCCCC...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGATTCACACCATCGCACTaGACTAACGGGAAGGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: RNTLEGTQKRRSELSIQRFTPSH*TNGKAE Trigger: CTCCGCCTTCCCGTTAGTCCAGTGCGATGGTGTGAA...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCTGGTTGTTTCCCCTCTaGGAGTGTTTCAATGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLWLFPL*ECFNVL Trigger: TAAAACATTGAAACACTCTCAGAGGGGAAACAACCA...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAAAGTGGATCTTCAGCCATCTTCCCTTGTGGCTGTAATTTTTCCTAACTTCACACCATCGCACTaGACTAACGGGAAGGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRKVDLQPSSLVAVIFPNFTPSH*TNGKAE Trigger: CTCCGCCTTCCCGTTAGTCCAGTGCGATGGTGTGAA...GTTAGGAAAAATTACAGCCACAAGGGAAGATGGCTGAAGATCCACTTTCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAATCTAGAGTCTATGGGTaGTGCCAGTTCACACCATCG | + |
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Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKSRVYG*CQFTPS Trigger: CGATGGTGTGAACTGGCATCACCCATAGACTCTAGA...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCAAAACAAAAACCTGTTaGGTTTGTTGGACAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLKTKTC*VCWTKA Trigger: TGCCTTTGTCCAACAAACTCAACAGGTTTTTGTTTT...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR TCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAACTCTGCTGCCCTTACTaGAGCTTCAATATTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKLCCPY*SFNICK Trigger: TTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAG...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGCTCTTGGTTGTTTCCCCTCTGAGAGTGTTTCAATGTTTTACAAGATCAGGCAACCGGAAGTCTaGACCCCAGCCCAGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: TNALGCFPSESVSMFYKIRQPEV*TPAQVF Trigger: GAACACCTGGGCTGGGGTGCAGACTTCCGGTTGCCT...GATCTTGTAAAACATTGAAACACTCTCAGAGGGGAAACAACCAAGAGCATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAATCTCTGCCTCTGCAATaGCAGGATCACAAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKSLPLQ*QDHKHT Trigger: TGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGA...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAGCCTGTCTCTGCCTCTaGAATGCCAGGATCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSACLCL*NARITS Trigger: GCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGC...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAGGATCTGCCTGTCTCTaGCTCTGCAATGCCAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSGSACL*LCNARI Trigger: GATCCTGGCATTGCAGAGGCAGAGACAGGCAGATCC...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTAAAGGCATTCTGTGTGTaGTTCCAGCAGGGCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLKAFCV*FQQGWV Trigger: CACCCAGCCCTGCTGGAAGCACACACAGAATGCCTT...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGTCTCTTCACTTACAGTaGCTCCTCCTCTTTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWSLHLQ*LLLFGK Trigger: CTTCCCAAAGAGGAGGAGGCACTGTAAGTGAAGAGA...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGCCTGGCTGTTTTACATaGGATCAGGTTCTTACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWPGCFT*DQVLTG Trigger: CCCAGTAAGAACCTGATCCCATGTAAAACAGCCAGG...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAGTCACCGTTCCGTCCTaGCTCTGTGACAGATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RNTLEGTQKRRSELSIQRVTVPS*LCDRFE Trigger: TTCAAATCTGTCACAGAGCCAGGACGGAACGGTGAC...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGACTCCGTTCTACAGTTTaGAAGGCACAAGGCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RNTLEGTQKRRSELSIQRLRSTV*KAQGTV Trigger: GACTGTGCCTTGTGCCTTCCAAACTGTAGAACGGAG...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 90 bp | TCAGTGGCTTACACACTAAGCAGCTGGCCATCAGAGAGGCTGAACTaGCACTGTACCATTAAAACACATTCTGGGGTAACGAGAGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SVAYTLSSWPSERLN*HCTIKTHSGVTRVN Trigger: GTTTACTCTCGTTACCCCAGAATGTGTTTTAATGGTACAGTGCAAGTTCAGCCTCTCTGATGGCCAGCTGCTTAGTGTGTAAGCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAATCTCTTCACTTACAGTaGCTCCTCCTCTTTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKSLHLQ*LLLFGK Trigger: CTTCCCAAAGAGGAGGAGGCACTGTAAGTGAAGAGA...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTATCTAGAGTCTATGGGTaGTGCCAGTTCACACCATCG | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLSRVYG*CQFTPS Trigger: CGATGGTGTGAACTGGCATCACCCATAGACTCTAGA...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAAAAACAAAAACCTGTTaGGTTTGTTGGACAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AWLQDAAYTNLDGARSHKKTKTC*VCWTKA Trigger: TGCCTTTGTCCAACAAACTCAACAGGTTTTTGTTTT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTACAGGGTTTCTCTCTCTaGTCTGGCTGTCCTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLQGFSL*SGCPRT Trigger: AGTTCTAGGACAGCCAGAGCAGAGAGAGAAACCCTG...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAACAAGCACACACCTGTaGCTGGCTGTTTTACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSTSTHL*LAVLHG Trigger: CCCATGTAAAACAGCCAGGCACAGGTGTGTGCTTGT...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAAAGGCATTCTGTGTGTaGTTCCAGCAGGGCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKKAFCV*FQQGWV Trigger: CACCCAGCCCTGCTGGAAGCACACACAGAATGCCTT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTAGCACACACCTGTGCCTaGCTGTTTTACATGGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLAHTCA*LFYMGS Trigger: TGATCCCATGTAAAACAGCCAGGCACAGGTGTGTGC...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 90 bp | TGTGTGCCCGCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTaGCAAAACATAACGTCAAAATATTTCAGATCCGGCCCAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: CVPAPSLLPLLKLQY*QNITSKYFRSGPKS Trigger: TGACTTTGGGCCGGATCTGAAATATTTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGCGGGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 90 bp | CAGCACCATATGCAGACTCATAATTCTGAGAGGGGCAGTGCTCACTaGAGACAAGAAAATGAGAAGACACGAATCCATTTCAGTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QHHMQTHNSERGSAH*RQENEKTRIHFSGL Trigger: TAAGCCACTGAAATGGATTCGTGTCTTCTCATTTTCTTGTCTCAAGTGAGCACTGCCCCTCTCAGAATTATGAGTCTGCATATGGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCACCCAAACAAGGGCTTTaGGACATTCTGTCTCTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSPKQGL*DILSLG Trigger: ACCTAGAGACAGAATGTCTCAAAGCCCTTGTTTGGG...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAACTCTGCTGCCCTTACTaGAGCTTCAATATTTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VGTHWKALRREDLSSQSKLCCPY*SFNICK Trigger: TTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAG...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCACCCATCAAAGGTACTTaGTGGTCCTGGGAGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSPIKGT*WSWEIL Trigger: AAGTATCTCCCAGGACCACCAAGTACCTTTGATGGG...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTACCTGGCTGTTTTACATaGGATCAGGTTCTTACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLPGCFT*DQVLTG Trigger: CCCAGTAAGAACCTGATCCCATGTAAAACAGCCAGG...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCATAAAAGCACTCAACTaGGATCCAGCTTTCCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSVTDLKCDILLSEKLCAIKALN*DPAFLR Trigger: TCTAAGGAAAGCTGGATCTCAGTTGAGTGCTTTTAT...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAATCTCTGCCTCTGCAATaGCAGGATCACAAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKSLPLQ*QDHKHT Trigger: TGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGA...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCTATAAGCATTTCCTGTaGCAAATGCTCTTGGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSVTDLKCDILLSEKLCAYKHFL*QMLLVV Trigger: AACAACCAAGAGCATTTGTCACAGGAAATGCTTATA...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAGGAATTAAAGACATGTaGCACCACCACCCCATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKGIKDM*HHHPIP Trigger: AGGAATGGGGTGGTGGTGGCACATGTCTTTAATTCC...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAATCTCTTCACTTACAGTaGCTCCTCCTCTTTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKSLHLQ*LLLFGK Trigger: CTTCCCAAAGAGGAGGAGGCACTGTAAGTGAAGAGA...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| 3UTR CAA 90 bp | TCCATGTGTATGACAGGACTTAGTACCCAATCCCATCAAAGGTACTaGGTGGTCCTGGGAGATACTTTTCAATATCACAAATGTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SMCMTGLSTQSHQRY*VVLGDTFQYHKCVV Trigger: AACAACACATTTGTGATATTGAAAAGTATCTCCCAGGACCACCAAGTACCTTTGATGGGATTGGGTACTAAGTCCTGTCATACACATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 90 bp | TATAATGCACACAGAAGTGAGGGAGCATCAAGAGATCCTCATGTCTaGGATGTGAATAGAAAAACATATAGAATGGAGTGTCGCTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: YNAHRSEGASRDPHV*DVNRKTYRMECRCR Trigger: CCTACAGCGACACTCCATTCTATATGTTTTTCTATTCACATCCAAGACATGAGGATCTCTTGATGCTCCCTCACTTCTGTGTGCATTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGGAAAGTGGATCTTCAGCCATCTTCCCTTGTGGCTGTAATTTTTCCTAACAAGACATCTCCACTGTaGAAACATAAAAGCACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SRKVDLQPSSLVAVIFPNKTSPL*KHKSTQ Trigger: TTGAGTGCTTTTATGTTTTCACAGTGGAGATGTCTT...GTTAGGAAAAATTACAGCCACAAGGGAAGATGGCTGAAGATCCACTTTCCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCATGGTTGTTTCCCCTCTaGGAGTGTTTCAATGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSWLFPL*ECFNVL Trigger: TAAAACATTGAAACACTCTCAGAGGGGAAACAACCA...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTATGGTTGTTTCCCCTCTaGGAGTGTTTCAATGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LMQTEYYKLEPPQALVVLWLFPL*ECFNVL Trigger: TAAAACATTGAAACACTCTCAGAGGGGAAACAACCA...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAGTGCCTCCTCCTCTTTaGGAAGTTAATAATTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSVPPPL*EVNNLI Trigger: GATCAAATTATTAACTTCCCAAAGAGGAGGAGGCAC...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAAACAAAAACCTGTTaGGTTTGTTGGACAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: APSLLPLLKLQYLQNITSKTKTC*VCWTKA Trigger: TGCCTTTGTCCAACAAACTCAACAGGTTTTTGTTTT...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAATTTCCTGTGACAAATaGTCTTGGTTGTTTCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKISCDK*SWLFPL Trigger: GAGGGGAAACAACCAAGAGCATTTGTCACAGGAAAT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAATAAAAGCACTCAACTaGGATCCAGCTTTCCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKIKALN*DPAFLR Trigger: TCTAAGGAAAGCTGGATCTCAGTTGAGTGCTTTTAT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAATATAAGCATTTCCTGTaGCAAATGCTCTTGGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SFSAALTEASIFAKHNVKYKHFL*QMLLVV Trigger: AACAACCAAGAGCATTTGTCACAGGAAATGCTTATA...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | CCCACTCGTGGATCGGAGCTAAGGCAACCGGAAGTCTaGACCCCAGCCCAGGTGTTCAGAATCACTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PTRGSELRQPEV*TPAQVFRITQP Trigger: AGGCTGAGTGATTCTGAACACCTGGGCTGGGGTGCAGACTTCCGGTTGCCTTAGCTCCGATCCACGAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | TGGCTGGTGAAGGAGCCCCAGGGATCTGCCTGTCTCTaGCTCTGCAATGCCAGGATCACAAGCACACACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLVKEPQGSACL*LCNARITSTHL Trigger: CAGGTGTGTGCTTGTGATCCTGGCATTGCAGAGGCAGAGACAGGCAGATCCCTGGGGCTCCTTCACCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | CGTAAGCTCCCAGCACAGGGTCCTGCCACCCGGCTCTaGTCCTTCTCTTCACTTACAGTGCCTCCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RKLPAQGPATRL*SFSSLTVPPPL Trigger: AAGAGGAGGAGGCACTGTAAGTGAAGAGAAGGAGCAGAGCCGGGTGGCAGGACCCTGTGCTGGGAGCTTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR TCA 72 bp | CGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTaGGTGGGCTCAGTTACAGCCCGAACACCCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSHKGHIKTQTR*VGSVTARTPRW Trigger: CCACCTGGGTGTTCGGGCTGTAACTGAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | GAGGAAGGGCTTTGCAAACCTCTCCGTTCTACAGTTTaGAAGGCACAAGGCACAGTCACCGTTCCGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EEGLCKPLRSTV*KAQGTVTVPSW Trigger: CCAGGACGGAACGGTGACTGTGCCTTGTGCCTTCCAAACTGTAGAACGGAGAGGTTTGCAAAGCCCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | TGGACAAAGGCATTCTGTGTGTGCTTCCAGCAGGGCTaGGTGCACAGTAACAGGCGTGAAAACAGCGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: WTKAFCVCFQQG*VHSNRRENSVT Trigger: AGTGACGCTGTTTTCACGCCTGTTACTGTGCACCCAGCCCTGCTGGAAGCACACACAGAATGCCTTTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAAAAGACACAGACCCGTaGAGTGGGCTCAGTTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AWLQDAAYTNLDGARSHKKDTDP*SGLSYS Trigger: GCTGTAACTGAGCCCACTCAACGGGTCTGTGTCTTT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR TCA 72 bp | CTCTCAATCCAAAGACGGGGCGTGAGGCCTGTTACTTaGCTACAGTTTCTAGGGCTTTGGAGTAGCTACGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSIQRRGVRPVT*LQFLGLWSSYG Trigger: ACCGTAGCTACTCCAAAGCCCTAGAAACTGTAGTCAAGTAACAGGCCTCACGCCCCGTCTTTGGATTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | TGGAGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTaGCTATACCAATTTGGATGGAGCTCGGAGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: WSSYGLGMAPRC*LYQFGWSSEPQ Trigger: TTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | CTTTGGAGTAGCTACGGTTTAGGCATGGCTCCAAGATaGTGCCTATACCAATTTGGATGGAGCTCGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWSSYGLGMAPR*CLYQFGWSSEP Trigger: TGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACTCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGCTCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTTGAGTGGGCTCACCACCCCATTCCTTTaGGTGGAATTTTACCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: WSSEPQRSHKDTDPLSGLTTPFL*VEFYPI Trigger: AATTGGGTAAAATTCCACCAAAAGGAATGGGGTGGT...GAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCCCGGCCCAAAGTCATTaGTTACTCACGCAGCGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSVTDLKCDILLSEKLCAPAQSH*LLTQRS Trigger: GCTACGCTGCGTGAGTAACAAATGACTTTGGGCCGG...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGACCGGCCCAAAGTCATTaGTTACTCACGCAGCGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RNTLEGTQKRRSELSIQRPAQSH*LLTQRS Trigger: GCTACGCTGCGTGAGTAACAAATGACTTTGGGCCGG...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | GATCACAAGCACACACCTGTGCCTGGCTGTTTTACATaGGATCAGGTTCTTACTGGGATGGCAAGGACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DHKHTPVPGCFT*DQVLTGMARTL Trigger: CAAAGTCCTTGCCATCCCAGTAAGAACCTGATCCCATGTAAAACAGCCAGGCACAGGTGTGTGCTTGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | GGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATaGAGCTCGGAGCCACAAAGGTCACATAAAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GMAPRCCLYQFG*SSEPQRSHKDT Trigger: TGTGTCTTTATGTGACCTTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | TCTACTCTCAATTTGATCAAGGCCAGGAAAGGCGGCTaGAGCACCATATGCAGACTCATAATTCTGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: STLNLIKARKGG*STICRLIILRG Trigger: CCCTCTCAGAATTATGAGTCTGCATATGGTGCTGCAGCCGCCTTTCCTGGCCTTGATCAAATTGAGAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAAAACAGCGTCACTTaGAAAGGACAGCCCGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VGTHWKALRREDLSSQSKENSVT*KGQPVT Trigger: TGTCACGGGCTGTCCTTTCAAAGTGACGCTGTTTTC...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAAAAAACAAAAACCTGTaGAGTTTGTTGGACAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AWLQDAAYTNLDGARSHKKNKNL*SLLDKG Trigger: GCCTTTGTCCAACAAACTCAACAGGTTTTTGTTTTT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 46% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCTACGGTTTAGGCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAAAAACCTGTTGAGTTaGTTGGACAAAGGCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSYGLGMAPRCCLYQFGWKNLLS*LDKGIL Trigger: CAGAATGCCTTTGTCCAACAAACTCAACAGGTTTTT...CCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGCCTAAACCGTAGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCACCCACAGGCTAAAATaGCTCTACCCTTTAAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: GSVTDLKCDILLSEKLCATHRLK*LYPLKC Trigger: GCATTTTAAAGGGTAGAGCAATTTTAGCCTGTGGGT...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | AAACATATAGAATGGAGTGTCGCTGTAGGAACACACTaGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KHIEWSVAVGTH*KALRREDLSSQ Trigger: TTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTACAGCGACACTCCATTCTATATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | CAGGACTTAGTACCCAATCCCATCAAAGGTACTTGGTaGTCCTGGGAGATACTTTTCAATATCACAAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QDLVPNPIKGTW*SWEILFNITNV Trigger: CACATTTGTGATATTGAAAAGTATCTCCCAGGACCACCAAGTACCTTTGATGGGATTGGGTACTAAGTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | AACAGCGTCACTTTGAAAGGACAGCCCGTGACATCCTaGATTCTCTACCATGTACCATGTTTTATAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSVTLKGQPVTS*ILYHVPCFIEN Trigger: GTTTTCTATAAAACATGGTACATGGTAGAGAATCCAGGATGTCACGGGCTGTCCTTTCAAAGTGACGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGATTACAAGATCATTTTTaGCAGTGGATGATTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNTLEGTQKRRSELSIQRLQDHF*QWMISR Trigger: CCTGGAAATCATCCACTGCAAAAAATGATCTTGTAA...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAACCACCCCATTCCTTTaGGTGGAATTTTACCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: SFSAALTEASIFAKHNVKTTPFL*VEFYPI Trigger: AATTGGGTAAAATTCCACCAAAAGGAATGGGGTGGT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR GCA 72 bp | GTAGTCACCAGGAAATATGAAGACACCGTTCATGACTaGAAATGGTGGACAGCTTTCAAGGTTATTTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVTRKYEDTVHD*KWWTAFKVISN Trigger: ATTAGAAATAACCTTGAAAGCTGTCCACCATTTGCAGTCATGAACGGTGTCTTCATATTTCCTGGTGACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAAAAAACCTGTTGAGTTaGTTGGACAAAGGCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFSAALTEASIFAKHNVKKNLLS*LDKGIL Trigger: CAGAATGCCTTTGTCCAACAAACTCAACAGGTTTTT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR TCA 72 bp | TTAAAGCCATTTCATGCCTTGAAGACATCTCCACTGTaGAAACATAAAAGCACTCAACTGAGATCCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKPFHALKTSPL*KHKSTQLRSSF Trigger: AAAGCTGGATCTCAGTTGAGTGCTTTTATGTTTTCACAGTGGAGATGTCTTCAAGGCATGAAATGGCTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CCA 72 bp | ACCAGGAAATATGAAGACACCGTTCATGACTGCAAATaGTGGACAGCTTTCAAGGTTATTTCTAATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TRKYEDTVHDCK*WTAFKVISNHL Trigger: AAGATGATTAGAAATAACCTTGAAAGCTGTCCACCATTTGCAGTCATGAACGGTGTCTTCATATTTCCTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAATTACAAGATCATTTTTaGCAGTGGATGATTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFSAALTEASIFAKHNVKLQDHF*QWMISR Trigger: CCTGGAAATCATCCACTGCAAAAAATGATCTTGTAA...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR TCA 72 bp | GTACCATGTTTTATAGAAAACTATCGAAAGTCAGCGTaGGATTGGTTACTCTTAACTGTGTGTGTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: VPCFIENYRKSA*DWLLLTVCVHS Trigger: TGAATGCACACACACAGTTAAGAGTAACCAATCTCACGCTGACTTTCGATAGTTTTCTATAAAACATGGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAGCAGCTCCTGAGCCCTaGGGCTCGGCTTGCGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNTLEGTQKRRSELSIQRAAPEP*GSACAP Trigger: TGGGGCGCAAGCCGAGCCCCAGGGCTCAGGAGCTGC...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| 3UTR CAA 72 bp | GGAGGAAGGGCTTTGCAAACCTCTCCGTTCTACAGTTaGGAAGGCACAAGGCACAGTCACCGTTCCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRALQTSPFYS*EGTRHSHRSVL Trigger: CAGGACGGAACGGTGACTGTGCCTTGTGCCTTCCAAACTGTAGAACGGAGAGGTTTGCAAAGCCCTTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 72 bp | TCGGAGCCACAAAGGTCACATAAAGACACAGACCCGTaGAGTGGGCTCAGTTACAGCCCGAACACCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEPQRSHKDTDP*SGLSYSPNTQV Trigger: CACCTGGGTGTTCGGGCTGTAACTGAGCCCACTCAACGGGTCTGTGTCTTTATGTGACCTTTGTGGCTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGAATGCCCAACGCCAGCTaGAGCAGTGCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTLEGTQKRRSELSIQRMPNAS*SSASSS Trigger: GCTGCTGCTGGCACTGCTGCAGCTGGCGTTGGGCAT...TCTTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| 3UTR CAA 72 bp | ACATGGGATCAGGTTCTTACTGGGATGGCAAGGACTTaGATAACTGAGCCATCTCCACAGCCCGGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWDQVLTGMART*ITEPSPQPGAG Trigger: ACCAGCTCCGGGCTGTGGAGATGGCTCAGTTATCAAAGTCCTTGCCATCCCAGTAAGAACCTGATCCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAAAACAAAGGCCCTGCTaGGCGGCTCCGAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGTHWKALRREDLSSQSKKQRPC*AAPRKA Trigger: TGCCTTCCTCGGAGCCGCTCAGCAGGGCCTTTGTTT...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAATCCTCAGGCAGCTCCTaGGCCCTGGGGCTCGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSAALTEASIFAKHNVKSSGSS*ALGLGL Trigger: CAAGCCGAGCCCCAGGGCTCAGGAGCTGCCTGAGGA...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| 3UTR CAA 72 bp | TGGGTGCACAGTAACAGGCGTGAAAACAGCGTCACTTaGAAAGGACAGCCCGTGACATCCTGGATTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: WVHSNRRENSVT*KGQPVTSWILY Trigger: GTAGAGAATCCAGGATGTCACGGGCTGTCCTTTCAAAGTGACGCTGTTTTCACGCCTGTTACTGTGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 72 bp | CGTCCTGGCTCTGTGACAGATTTGAAGTGTGACATTTaGCTAAGTGAGAAGCTGTGTGCCCGCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGSVTDLKCDI*LSEKLCARSFS Trigger: AGAGAAGGAGCGGGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCCAGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAAAAAACAAAGGCCCTGCTaGGCGGCTCCGAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSAALTEASIFAKHNVKKQRPC*AAPRKA Trigger: TGCCTTCCTCGGAGCCGCTCAGCAGGGCCTTTGTTT...TTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAAACCTTCATAGAAAACTaGACACATGTCCTCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLQDAAYTNLDGARSHKTFIEN*THVLSS Trigger: TGACGAGAGGACATGTGTCCAGTTTTCTATGAAGGT...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 72 bp | TACACACTAAGCAGCTGGCCATCAGAGAGGCTGAACTaGCACTGTACCATTAAAACACATTCTGGGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: YTLSSWPSERLN*HCTIKTHSGVT Trigger: CGTTACCCCAGAATGTGTTTTAATGGTACAGTGCAAGTTCAGCCTCTCTGATGGCCAGCTGCTTAGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCATGAGACACAAAGCATaGACAGTCCAAGGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVTDLKCDILLSEKLCAMRHKA*TVQGKP Trigger: TGGCTTACCTTGGACTGTTCATGCTTTGTGTCTCAT...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| CDS-3UTR CCA 90 bp | GTAGGAACACACTGGAAGGCACTCAGAAGAGAAGATCTGAGCTCTCAATCCAAAGTCCTCTCGTCAACTTaGTATGAGACACAAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VGTHWKALRREDLSSQSKVLSST*YETQSM Trigger: CATGCTTTGTGTCTCATACCAAGTTGACGAGAGGAC...TTTGGATTGAGAGCTCAGATCTTCTCTTCTGAGTGCCTTCCAGTGTGTTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGTGACAGATTTGAAGTGTGACATTTTGCTAAGTGAGAAGCTGTGTGCCACCTTCATAGAAAACTaGACACATGTCCTCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVTDLKCDILLSEKLCATFIEN*THVLSS Trigger: TGACGAGAGGACATGTGTCCAGTTTTCTATGAAGGT...GGCACACAGCTTCTCACTTAGCAAAATGTCACACTTCAAATCTGTCACAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR TCA 90 bp | CTTATGCAGACAGAATATTATAAGCTGGAACCACCCCAAGCCTTGGTTGTGTTACTCGTCAACTTGGTATaGGACACAAAGCATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQTEYYKLEPPQALVVLLVNLV*DTKHEQ Trigger: CTGTTCATGCTTTGTGTCTCATACCAAGTTGACGAG...TAACACAACCAAGGCTTGGGGTGGTTCCAGCTTATAATATTCTGTCTGCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| 3UTR CAA 72 bp | ATGCAGACTCATAATTCTGAGAGGGGCAGTGCTCACTaGAGACAAGAAAATGAGAAGACACGAATCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQTHNSERGSAH*RQENEKTRIHF Trigger: GAAATGGATTCGTGTCTTCTCATTTTCTTGTCTCAAGTGAGCACTGCCCCTCTCAGAATTATGAGTCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTTGCAAAACATAACGTCAACCTTCATAGAAAACTaGACACATGTCCTCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: APSLLPLLKLQYLQNITSTFIEN*THVLSS Trigger: TGACGAGAGGACATGTGTCCAGTTTTCTATGAAGGT...TGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 72 bp | GCTCCTTCTCTGCTGCCCTTACTGAAGCTTCAATATTaGCAAAACATAACGTCAAAATATTTCAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: APSLLPLLKLQY*QNITSKYFRSG Trigger: GCCGGATCTGAAATATTTTGACGTTATGTTTTGCAAATATTGAAGCTTCAGTAAGGGCAGCAGAGAAGGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| 3UTR CAA 72 bp | CACAGAAGTGAGGGAGCATCAAGAGATCCTCATGTCTaGGATGTGAATAGAAAAACATATAGAATGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSEGASRDPHV*DVNRKTYRMEC Trigger: ACACTCCATTCTATATGTTTTTCTATTCACATCCAAGACATGAGGATCTCTTGATGCTCCCTCACTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
||
| CDS GCA 90 bp | GCCATGAGGAAGCCCAGCACGGTCACCGCGATGCCCAACGCCAGCTaGAGCAGTGCCAGCAGCAGCGGGAAGCGGCAGCCACAGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AMRKPSTVTAMPNAS*SSASSSGKRQPQQV Trigger: GACCTGCTGTGGCTGCCGCTTCCCGCTGCTGCTGGCACTGCTGCAGCTGGCGTTGGGCATCGCGGTGACCGTGCTGGGCTTCCTCATGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
||
| CDS GCA 90 bp | GCGCAAGCAGGGAGTAGTGGTGGGCGGCAAAGGCCACAGCCAGCATaGAGACCATCAGGCCGAGGGCACTCAACAGGAAGTAGAATACCT | + |
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Preference number: 5 (lower is better) Translates to: AQAGSSGGRQRPQPA*RPSGRGHSTGSRIP Trigger: AGGTATTCTACTTCCTGTTGAGTGCCCTCGGCCTGATGGTCTGCATGCTGGCTGTGGCCTTTGCCGCCCACCACTACTCCCTGCTTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS-3UTR CAA 90 bp | GATGTAAGGGCGGCTGGGATAAACACCAGAGCTAGCGCTGGCTCTAGGTCATCTTCCGAGGAAGGCAGCTaGCACTGGCAAGAATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DVRAAGINTRASAGSRSSSEEGS*HWQESR Trigger: CCTGGATTCTTGCCAGTGCAAGCTGCCTTCCTCGGA...AGATGACCTAGAGCCAGCGCTAGCTCTGGTGTTTATCCCAGCCGCCCTTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS-3UTR CAA 90 bp | GCATGGCTCCAAGATGCTGCCTATACCAATTTGGATGGAGCTCGGAGCCACAAATCCGAGGAAGGCAGCTaGCACTGGCAAGAATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AWLQDAAYTNLDGARSHKSEEGS*HWQESR Trigger: CCTGGATTCTTGCCAGTGCAAGCTGCCTTCCTCGGA...TTTGTGGCTCCGAGCTCCATCCAAATTGGTATAGGCAGCATCTTGGAGCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS CCA 90 bp | CAAGCCAGCAAGCACACGAGGCCACAGACCAGGTTTAGGACCATCTaGATGATTAAGAACAATTTGAAAGTGCCAGTGACGCTGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: QASKHTRPQTRFRTI*MIKNNLKVPVTLVQ Trigger: CTGTACCAGCGTCACTGGCACTTTCAAATTGTTCTTAATCATCCAGATGGTCCTAAACCTGGTCTGTGGCCTCGTGTGCTTGCTGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAAAGTGGATCTTCAGCCATCTTCCCTTGTGGCTGTAATTTTTCCTAACTCCGAGGAAGGCAGCTaGCACTGGCAAGAATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRKVDLQPSSLVAVIFPNSEEGS*HWQESR Trigger: CCTGGATTCTTGCCAGTGCAAGCTGCCTTCCTCGGA...GTTAGGAAAAATTACAGCCACAAGGGAAGATGGCTGAAGATCCACTTTCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS TCA 90 bp | TACCTTCATAGAAAACTGGACACATGTCCTCTCGTCAACTTGGTATaGGACACAAAGCATGAACAGTCCAAGGTAAGCCACCACGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: YLHRKLDTCPLVNLV*DTKHEQSKVSHHAD Trigger: GTCTGCGTGGTGGCTTACCTTGGACTGTTCATGCTTTGTGTCTCATACCAAGTTGACGAGAGGACATGTGTCCAGTTTTCTATGAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
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| CDS GCA 72 bp | AAGCCCAGCACGGTCACCGCGATGCCCAACGCCAGCTaGAGCAGTGCCAGCAGCAGCGGGAAGCGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KPSTVTAMPNAS*SSASSSGKRQP Trigger: TGGCTGCCGCTTCCCGCTGCTGCTGGCACTGCTGCAGCTGGCGTTGGGCATCGCGGTGACCGTGCTGGGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032383.14 |
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| CDS GCA 72 bp | GGGAGTAGTGGTGGGCGGCAAAGGCCACAGCCAGCATaGAGACCATCAGGCCGAGGGCACTCAACAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSSGGRQRPQPA*RPSGRGHSTGS Trigger: ACTTCCTGTTGAGTGCCCTCGGCCTGATGGTCTGCATGCTGGCTGTGGCCTTTGCCGCCCACCACTACTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS CAA 72 bp | ACAAAGGCCCTGCTGAGCGGCTCCGAGGAAGGCAGCTaGCACTGGCAAGAATCCAGGGAGGTCTCGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TKALLSGSEEGS*HWQESREVSQV Trigger: TACCTGCGAGACCTCCCTGGATTCTTGCCAGTGCAAGCTGCCTTCCTCGGAGCCGCTCAGCAGGGCCTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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| CDS CCA 72 bp | AAGCACACGAGGCCACAGACCAGGTTTAGGACCATCTaGATGATTAAGAACAATTTGAAAGTGCCAGTGACG | + |
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Preference number: 6 (lower is better) Translates to: KHTRPQTRFRTI*MIKNNLKVPVT Trigger: CGTCACTGGCACTTTCAAATTGTTCTTAATCATCCAGATGGTCCTAAACCTGGTCTGTGGCCTCGTGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032383.14 ENSMUST00000111701.2 ENSMUST00000111702.8 |
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