Pregenerated sensors for SSH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034616Ensembl transcript IDs: ENSMUST00000037992.16, ENSMUST00000113852.6, ENSMUST00000235685.2, ENSMUST00000236794.2, ENSMUST00000237501.2, ENSMUST00000237670.2
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTGGGGCGTACAATaGGCCGGAGCTCCTGCACGTGGATCAGGGCTTGCTCCAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GRSVAGAGSRGWGVQ*AGAPARGSGLAPGP Trigger: GGGACCTGGAGCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | TGGCGCAGGAAGCCGTGGTTGGGGCGTACAATGGGCCGGAGCTCCTaGACGTGGATCAGGGCTTGCTCCAGGTCCCAGCCATACTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: WRRKPWLGRTMGRSS*TWIRACSRSQPYCF Trigger: GAAACAGTATGGCTGGGACCTGGAGCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | TCAGAATGCCCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTaGGGCGTACAATGGGCCGGAGCTCCTGCACGTGGATCAGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SECPGRSVAGAGSRG*GVQWAGAPARGSGL Trigger: AAGCCCTGATCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | CGCTCTGCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTaGTGGCCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTC | + |
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Preference number: 1 (lower is better) Translates to: RSALALAPVLGRPVS*WPPGQHYEGQPQTV Trigger: GACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR TCA 90 bp | AGCAGCAGAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTaGGCCCCCTCAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATC | + |
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Preference number: 1 (lower is better) Translates to: SSRDSGQLGGWVGDL*APSEPVGLGTESAI Trigger: GATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTCTGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR TCA 90 bp | TGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCAGCACTATaGAGGGCAACCACAGACTGTCGAGACTTCAGGGCAGGCCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: CSWKARVLLATRAAL*RATTDCRDFRAGQG Trigger: GCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | GGGCAACCACAGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTTaGGGACCCGCTGGCCACCTTTGGCTCTTGAAAGCTGAGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: GQPQTVETSGQAKAP*GPAGHLWLLKAERM Trigger: CATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | TCTGCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTaGCCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTCGAG | + |
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Preference number: 1 (lower is better) Translates to: SALALAPVLGRPVSC*PPGQHYEGQPQTVE Trigger: CTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | CTGCCTTTGTGGCCACTAGTCCCCTGGCCTAGCTGTCTCCAGGACTaGAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: LPLWPLVPWPSCLQD*SRRGWKTQGGMATS Trigger: ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGACAGCTAGGCCAGGGGACTAGTGGCCACAAAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR GCA 90 bp | ATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTaGTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ITFRSLGVEDIPGSL*SCPCPCSWKARVLL Trigger: CAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | AGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTaGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGT | + |
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Preference number: 1 (lower is better) Translates to: SWVGGWVTCEPPQSL*DWGLKVLSAFVATS Trigger: ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR GCA 90 bp | CCACCAGGCACAAGGCCACTGCCTAGAGCTACCTCACATGCCTGGTaGAATACCTGCAGTGTGGCCCACATGGTCTGGATAGAGACAGGC | + |
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Preference number: 1 (lower is better) Translates to: PPGTRPLPRATSHAW*NTCSVAHMVWIETG Trigger: GCCTGTCTCTATCCAGACCATGTGGGCCACACTGCAGGTATTGCACCAGGCATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCCTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | ACTTCAGGGCAGGCCAAGGCCCCTTGCGGACCCGCTGGCCACCTTTaGCTCTTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTG | + |
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Preference number: 1 (lower is better) Translates to: TSGQAKAPCGPAGHL*LLKAERMDEEALHL Trigger: CAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | CTGCCACCAGGCACAAGGCCACTGCCTAGAGCTACCTCACATGCCTaGTGCAATACCTGCAGTGTGGCCCACATGGTCTGGATAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: LPPGTRPLPRATSHA*CNTCSVAHMVWIET Trigger: TGTCTCTATCCAGACCATGTGGGCCACACTGCAGGTATTGCACCAGGCATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCCTGGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR TCA 90 bp | GTGGCCCACATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTTaGCCACCAGATGTCACACTGAAGCCCCCATCGCCGTCCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: VAHMVWIETGLKIRL*PPDVTLKPPSPSRY Trigger: GTACCTGGACGGCGATGGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR TCA 90 bp | CATACTGTTTCATGGCATAGGCTAGTACCGTGGCGGCAGAACGGCTaGCACCCATCTTACAGTGGACTAGCACCCGAGTGCCCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: HTVSWHRLVPWRQNG*HPSYSGLAPECPVL Trigger: GAGCACAGGGCACTCGGGTGCTAGTCCACTGTAAGATGGGTGTCAGCCGTTCTGCCGCCACGGTACTAGCCTATGCCATGAAACAGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | AACACCTGCCACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTaGTCTGAAGCCTGTCCAGGCTCAGCATTAGGTGGTCGAAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: NTCHNSARIACSIFS*SEACPGSALGGRKD Trigger: GTCCTTTCGACCACCTAATGCTGAGCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | AAGATGCGAGAGGCCCGGTCTTGCTGGGCCATGAGCAGCAACATCTaGTTGTCAATAAAGTCACGGTACTGCTGGAGAGGACATCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: KMREARSCWAMSSNI*LSIKSRYCWRGHPR Trigger: TCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTATTGACAACCAGATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTCTCGCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR CCA 90 bp | CCCTGTGCTCTGGCATCCTCAATGAATCGATGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGATTCCTCATCCCAGACACGTACATTG | + |
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Preference number: 1 (lower is better) Translates to: PCALASSMNRCVSFQ*GRSCADSSSQTRTL Trigger: CAATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGATGCCAGAGCACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR TCA 90 bp | GAAGCTGTGCCGATTCCTCATCCCAGACACGTACATTGTAATAGGTaGAGCGCTCAGGGAAGAAGTTGTCAATCTCCCGGGCCATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: EAVPIPHPRHVHCNR*SAQGRSCQSPGPCS Trigger: TGAACATGGCCCGGGAGATTGACAACTTCTTCCCTGAGCGCTTCACCTATTACAATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | ATCTCTTTAGAAGTGACACTGTCCAGGTCACTGGTGTCCAACACCTaGCACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ISLEVTLSRSLVSNT*HNSARIACSIFSCS Trigger: AGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACACCAGTGACCTGGACAGTGTCACTTCTAAAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR GCA 90 bp | ATCCTCAATGAATCGATGTGTCTCCTTCCAGTGGGGCAGAAGCTGTaGCGATTCCTCATCCCAGACACGTACATTGTAATAGGTGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: ILNESMCLLPVGQKL*RFLIPDTYIVIGEA Trigger: CGCTTCACCTATTACAATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCCCAGGCAAGGGCACTaGCACCAGGCACAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALALAPVLGRPVSCWPPGPRQGH*HQAQGH Trigger: GTGGCCTTGTGCCTGGTGGCAGTGCCCTTGCCTGGG...CCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCTCTGCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCCGCCAGGGGCTCCTCTaGGGAGACCACACCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: SLCSCPCPCSWKARVLLARQGLL*GDHTHF Trigger: AAAGTGGGTGTGGTCTCCCCAGAGGAGCCCCTGGCG...GGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCACGCCAGGGGCTCCTCTaGGGAGACCACACCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: SCPCPCSWKARVLLATRARQGLL*GDHTHF Trigger: AAAGTGGGTGTGGTCTCCCCAGAGGAGCCCCTGGCG...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCAAGGCCCGTGTCCTGCTaGCCACCAGGGCAGCACTAT | + |
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Preference number: 2 (lower is better) Translates to: SCPCPCSWKARVLLATRARPVSC*PPGQHY Trigger: ATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCT...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCCAGGAGACTGATGGAGCGCATGACCCCTCGAAGGTTGATGCGGGGCCGCGCAGCTCCAGGGCCTaGCGGATCTCTTTAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GLQETDGAHDPSKVDAGPRSSRA*RISLEV Trigger: CACTTCTAAAGAGATCCGTCAGGCCCTGGAGCTGCG...CGGCCCCGCATCAACCTTCGAGGGGTCATGCGCTCCATCAGTCTCCTGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGACCACACCCACTTTCTaGTCCCAGACGTGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ALALAPVLGRPVSCWPPGTTPTF*SQTWLC Trigger: GCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGT...CCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACCACAGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTTGCGGACCCGCGCCTGGTGCAATACCTaGAGTGTGGCCCACATGGTC | + |
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Preference number: 2 (lower is better) Translates to: ATTDCRDFRAGQGPLRTRAWCNT*SVAHMV Trigger: GACCATGTGGGCCACACTGCAGGTATTGCACCAGGC...GCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGTGGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCAGTCAGAATGCCCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTAGAGGTGGGGGAAGATaGGAGAGGCCCGGTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: GWQSECPGRSVAGAGSRGRGGGR*ERPGLA Trigger: AGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCT...ACCACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGACTGCCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCCAGGAGACTGATGGAGCGCATGACCCCTCGAAGGTTGATGCGGGGCCGCATCTTTTCCTGCTCTaGAGCCTGTCCAGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLQETDGAHDPSKVDAGPHLFLL*SLSRLS Trigger: GCTGAGCCTGGACAGGCTTCAGAGCAGGAAAAGATG...CGGCCCCGCATCAACCTTCGAGGGGTCATGCGCTCCATCAGTCTCCTGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCAACCACACCCACTTTCTaGTCCCAGACGTGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SCPCPCSWKARVLLATRATTPTF*SQTWLC Trigger: GCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGT...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCACTCTGCTCTTGCCCTTaGCCCTGTTCTTGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SCPCPCSWKARVLLATRALCSCP*PCSWKA Trigger: GGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAG...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTTGCGGACCCGCTGGCCACCTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RLSRLQGRPRPLADPLATSARIA*SIFSCS Trigger: AGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGA...GGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTTGCGGACCCGCTGGCCACAGGTAGATATGGGCTaGGACCTAAGGCTGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TDCRDFRAGQGPLRTRWPQVDMG*DLRLQE Trigger: TTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTG...TGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGGGCTCCAGGAGACTGATGGAGCGCATGACCCCTCGAAGGTTGATGCGGAGACCAGGCCCAGGGTaGAGCTGTGGGAACTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SEGSRRLMERMTPRRLMRRPGPG*SCGNCC Trigger: ACAGCAGTTCCCACAGCTGCACCCTGGGCCTGGTCT...CCGCATCAACCTTCGAGGGGTCATGCGCTCCATCAGTCTCCTGGAGCCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCATGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: SCPCPCSWKARVLLATRACVSFQ*GRSCAD Trigger: ATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACA...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR CAA 90 bp | AGAAGACATACCAGGCTCGCTCTGCTCTTGCCCTTGCCCCTGTTCTaGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCAGCACTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: RRHTRLALLLPLPLF*EGPCPAGHQGSTMK Trigger: CTTCATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTATGTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTCGAGACTTCAGGGCAGCCATCACCTCCCCACTaGCCCCTGGTTCTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPGQHYEGQPQTVETSGQPSPPH*PLVLVE Trigger: TTCCACCAGAACCAGGGGGCAGTGGGGAGGTGATGG...CTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | GAACGGCTGACACCCATCTTACAGTGGACTAGCACCCGAGTGCCCTGTGCTCTGCCATCACCTCCCCACTaGCCCCTGGTTCTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ERLTPILQWTSTRVPCALPSPPH*PLVLVE Trigger: TTCCACCAGAACCAGGGGGCAGTGGGGAGGTGATGG...CAGAGCACAGGGCACTCGGGTGCTAGTCCACTGTAAGATGGGTGTCAGCCGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAACCACAGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTTGCGGACCCAACCCTGGTCAGAGTTaGGTTTCTCCTGGTAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: GQPQTVETSGQAKAPCGPNPGQS*VSPGSK Trigger: CTTACTACCAGGAGAAACTCAACTCTGACCAGGGTT...GGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGTGGAAGAGGTGGCAATaGTGTAGAAACTTCAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: LLLPLPLFLEGPCPAGHQWKRWQ*CRNFRR Trigger: GCGCCTGAAGTTTCTACACCATTGCCACCTCTTCCA...CTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGCGCATGACCCCTCGAAGGTTGATGCGGGGCCGCAGTCCAAGTTCTTCTGCCCCCTGGTTCTGGTaGAAGAGGTGGCAATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: MERMTPRRLMRGRSPSSSAPWFW*KRWQWC Trigger: ACACCATTGCCACCTCTTCCACCAGAACCAGGGGGC...AGAAGAACTTGGACTGCGGCCCCGCATCAACCTTCGAGGGGTCATGCGCTCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTGCTCGCCCCCTGGTTCTGGTaGAAGAGGTGGCAATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PHHLPEPRGRRHTRLALLAPWFW*KRWQWC Trigger: ACACCATTGCCACCTCTTCCACCAGAACCAGGGGGC...GAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCCAGTGGGGCAGAAGCTGTGCCGATTCCTCATCCCAGACACGTACATAGGCCCGTGTCCTGCTaGCCACCAGGGCAGCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: SPSSGAEAVPIPHPRHVHRPVSC*PPGQHY Trigger: ATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCT...ATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CAA 90 bp | GGGCAGGCCAAGGCCCCTTGCGGACCCGCTGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQAKAPCGPAGHLWL*KAERMDEEALHLKR Trigger: TCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGACAGGTAGATATGGGCTaGGACCTAAGGCTGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGQVDMG*DLRLQE Trigger: TTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTG...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR-3UTR CCA 90 bp | ATCTACACTGGCCTGCCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCCCTTGCCCCTGTTCTTaGAAGGCCCGTGTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IYTGLPHHLPEPRGRRHTPCPCS*KARVLL Trigger: CAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGG...GGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGGCAGGCCAGTGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCCGAGTGCCCTGTGCTCTGGCATCCTCAATGAATCGATGTGTCTCCTTCCCTTGCCCCTGTTCTTaGAAGGCCCGTGTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: STRVPCALASSMNRCVSFPCPCS*KARVLL Trigger: CAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGG...GAAGGAGACACATCGATTCATTGAGGATGCCAGAGCACAGGGCACTCGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTTCCAGTGGGGCAGAAGCTGTGCCGATTCCTCATCCCAGACACGTACATCCCAGGGTGCAGCTGTaGGAACTGCTGTCAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPSSGAEAVPIPHPRHVHPRVQL*ELLSGK Trigger: CTTCCCTGACAGCAGTTCCCACAGCTGCACCCTGGG...ATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CAA 90 bp | ATGCGAGAGGCCCGGTCTTGCTGGGCCATGAGCAGCAACATCTGGTaGTCAATAAAGTCACGGTACTGCTGGAGAGGACATCCCAGACGC | + |
|
Preference number: 2 (lower is better) Translates to: MREARSCWAMSSNIW*SIKSRYCWRGHPRR Trigger: GCGTCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTATTGACAACCAGATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTCTCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CAA 90 bp | CTCAGAGCCCAAGTAGAGGTGGGGGAAGATGCGAGAGGCCCGGTCTaGCTGGGCCATGAGCAGCAACATCTGGTTGTCAATAAAGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: LRAQVEVGEDARGPV*LGHEQQHLVVNKVT Trigger: CGTGACTTTATTGACAACCAGATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCTACTTGGGCTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGCCTTGTCCTCCTCCCTGCTGTCATCTACACTGGCCTGCCTCATCACCTCAGGCACAAGGCCACTaGCTAGAGCTACCTCACATG | + |
|
Preference number: 2 (lower is better) Translates to: LRPCPPPCCHLHWPASSPQAQGH*LELPHM Trigger: CATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCCTG...AGGTGATGAGGCAGGCCAGTGTAGATGACAGCAGGGAGGAGGACAAGGCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGGCCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTCGAGACTTCACCACCCCAAGCAGGATaGCCTCCTCACTCAGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CWPPGQHYEGQPQTVETSPPQAG*PPHSVL Trigger: AAGAACTGAGTGAGGAGGCCATCCTGCTTGGGGTGG...TGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGGCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CAA 90 bp | TGTGGCCCACATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTaGACCACCAGATGTCACACTGAAGCCCCCATCGCCGTCCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: CGPHGLDRDRLEDSA*TTRCHTEAPIAVQV Trigger: TACCTGGACGGCGATGGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACCTGCAGTGTGGCCCACATGGTCTGGATAGAGACAGGCTTGAAGATTCGGGAAGTGGCAAAGGTCTaGGGGCAGCTGGGAAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: NTCSVAHMVWIETGLKIREVAKV*GQLGRS Trigger: GCTCCTTCCCAGCTGCCCTCAGACCTTTGCCACTTC...CCGAATCTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCACACTGCAGGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTGCTCTGGAAGAGGTGGCAATaGTGTAGAAACTTCAGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: PHHLPEPRGRRHTRLALLWKRWQ*CRNFRR Trigger: GCGCCTGAAGTTTCTACACCATTGCCACCTCTTCCA...GAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGGCCTTGTCCTCCTCCCTGCTGTCATCTACACTGGCCTGCCTCATCACCTGTGGCCCACATGGTCTaGATAGAGACAGGCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRPCPPPCCHLHWPASSPVAHMV*IETGLK Trigger: CTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCAC...AGGTGATGAGGCAGGCCAGTGTAGATGACAGCAGGGAGGAGGACAAGGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCACCTCCTGCAGCTGTGGGAACTaGTGTCAGGGAAGTCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SSSFGVSWLPSRPITITSCSCGN*CQGSPP Trigger: GGGTGGACTTCCCTGACAGCAGTTCCCACAGCTGCA...GGAGGTGATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTCCAAGTTCTTCTTTTaGGGTTTCCTGGCTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ACLITFRSLGVEDIPGSLSKFFF*GFLASF Trigger: GAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGA...GAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACGGCTGACACCCATCTTACAGTGGACTAGCACCCGAGTGCCCTGTGCTCTGTCCAAGTTCTTCTTTTaGGGTTTCCTGGCTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERLTPILQWTSTRVPCALSKFFF*GFLASF Trigger: GAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGA...CAGAGCACAGGGCACTCGGGTGCTAGTCCACTGTAAGATGGGTGTCAGCCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCCCCGCTGGCCACCTTTaGCTCTTGAAAGCTGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPSSSFGVSWLPSRPITIPAGHL*LLKAER Trigger: TCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGG...GATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCTGCTCCATCTTTTCCTaGTCTGAAGCCTGTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPSSSFGVSWLPSRPITICSIFS*SEACPG Trigger: GCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCA...GATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCAGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCTTCTGGTGGAAGAGGTaGCAATGGTGTAGAAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: RSPSSSFGVSWLPSRPITFWWKR*QWCRNF Trigger: GAAGTTTCTACACCATTGCCACCTCTTCCACCAGAA...GGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTCTGGCACCGTCCAGGTACACCTaGGTATCACTCCAGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KAERMDEEALHLKRKLLAPSRYT*VSLQRG Trigger: GCCCCTCTGGAGTGATACCCAGGTGTACCTGGACGG...TGCCAGAAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGAAGTGGCAAAGGTCTaGGGGCAGCTGGGAAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSEVAKV*GQLGRS Trigger: GCTCCTTCCCAGCTGCCCTCAGACCTTTGCCACTTC...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR-3UTR CCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCAGTTGGGTGGGTGGGTaGGTGACCTGTGAGCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLSWVGG*VTCEPP Trigger: AGGGGGCTCACAGGTCACCCACCCACCCACCCAACT...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCGAGATTCGGGTCAGTTaGGTGGGTGGGTGGGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLEIRVS*VGGWVT Trigger: GGTCACCCACCCACCCACCCAACTGACCCGAATCTC...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR-3UTR TCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTGAAGTGGCAAAGGTCTaGGGGCAGCTGGGAAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTEVAKV*GQLGRS Trigger: GCTCCTTCCCAGCTGCCCTCAGACCTTTGCCACTTC...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCCTTACTCTGTTTTTCTaGAGTTCCTCCAGGTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPSSSFGVSWLPSRPITILTLFF*SSSRLA Trigger: TGCCAACCTGGAGGAACTTCAGAAAAACAGAGTAAG...GATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| 3UTR-3UTR CCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTGGCCACTAGTCCCCTaGCCTAGCTGTCTCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLWPLVP*PSCLQD Trigger: GTCCTGGAGACAGCTAGGCCAGGGGACTAGTGGCCA...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGAGGGCAAGGGAGACATaGACTAGAAAACCCACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLRARET*TRKPTL Trigger: TAGGGTGGGTTTTCTAGTTCATGTCTCCCTTGCCCT...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTTTCTGGTGGAAGAGGTaGCAATGGTGTAGAAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLKAERMDEEALHLKRKLFWWKR*QWCRNF Trigger: GAAGTTTCTACACCATTGCCACCTCTTCCACCAGAA...AAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCACGCAGGAAGCCGTGGTaGGGGCGTACAATGGGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SCPCPCSWKARVLLATRARRKPW*GRTMGR Trigger: CCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCG...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | GCTCCCAGACGTGGCTCTGCCGGCTGGCAGTCAGAATaGCCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: APRRGSAGWQSE*PGRSVAGAGSR Trigger: ACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGACTGCCAGCCGGCAGAGCCACGTCTGGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | GCCAGGGGCTCCTCTGGGGAGACCACACCCACTTTCTaGTCCCAGACGTGGCTCTGCCGGCTGGCAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARGSSGETTPTF*SQTWLCRLAVR Trigger: TCTGACTGCCAGCCGGCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGTCTCCCCAGAGGAGCCCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | CCAGGCTCGCTCTGCTCTTGCCCTTGCCCCTGTTCTTaGAAGGCCCGTGTCCTGCTGGCCACCAGGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PGSLCSCPCPCS*KARVLLATRAA Trigger: TGCTGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | CCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTaGGGCGTACAATGGGCCGGAGCTCCTGCACGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGRSVAGAGSRG*GVQWAGAPARG Trigger: TCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | AAGCCGTGGTTGGGGCGTACAATGGGCCGGAGCTCCTaGACGTGGATCAGGGCTTGCTCCAGGTCCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KPWLGRTMGRSS*TWIRACSRSQP Trigger: TGGCTGGGACCTGGAGCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | GGGGAACTGAGGGCAGCAGCAGAGATTCGGGTCAGTTaGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GELRAAAEIRVS*VGGWVTCEPPQ Trigger: CTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTCTGCTGCTGCCCTCAGTTCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CCA 72 bp | GTAGCTGGCGCAGGAAGCCGTGGTTGGGGCGTACAATaGGCCGGAGCTCCTGCACGTGGATCAGGGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VAGAGSRGWGVQ*AGAPARGSGLA Trigger: AGCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | GGGTATCACTCCAGAGGGGCAAGACCAGGCCCAGGGTaGAGCTGTGGGAACTGCTGTCAGGGAAGTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GYHSRGARPGPG*SCGNCCQGSPP Trigger: GGGTGGACTTCCCTGACAGCAGTTCCCACAGCTGCACCCTGGGCCTGGTCTTGCCCCTCTGGAGTGATACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | GTCACACTGAAGCCCCCATCGCCGTCCAGGTACACCTaGGTATCACTCCAGAGGGGCAAGACCAGGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTLKPPSPSRYT*VSLQRGKTRPR Trigger: CCTGGGCCTGGTCTTGCCCCTCTGGAGTGATACCCAGGTGTACCTGGACGGCGATGGGGGCTTCAGTGTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | ACCGTGGCGGCAGAACGGCTGACACCCATCTTACAGTaGACTAGCACCCGAGTGCCCTGTGCTCTGGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TVAAERLTPILQ*TSTRVPCALAS Trigger: GGATGCCAGAGCACAGGGCACTCGGGTGCTAGTCCACTGTAAGATGGGTGTCAGCCGTTCTGCCGCCACGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | CCTGTGAGCCCCCTCAGAGCCTGTGGGACTGGGGACTaGAAGTGCTATCTGCCTTTGTGGCCACTAGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PVSPLRACGTGD*KCYLPLWPLVP Trigger: GGGGACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTGAGGGGGCTCACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR TCA 72 bp | AAGGCCCGTGTCCTGCTGGCCACCAGGGCAGCACTATaGAGGGCAACCACAGACTGTCGAGACTTCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KARVLLATRAAL*RATTDCRDFRA Trigger: TGCCCTGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | TGGCCACTAGTCCCCTGGCCTAGCTGTCTCCAGGACTaGAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: WPLVPWPSCLQD*SRRGWKTQGGM Trigger: CATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGACAGCTAGGCCAGGGGACTAGTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR GCA 72 bp | CGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTaGTCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: RSLGVEDIPGSL*SCPCPCSWKAR Trigger: ACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | GGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTaGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGWVTCEPPQSL*DWGLKVLSAFV Trigger: CACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR GCA 72 bp | GCCTTGTCCTCCTCCCTGCTGTCATCTACACTGGCCTaGCTCATCACCTTCCGGAGCCTAGGGGTAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ALSSSLLSSTLA*LITFRSLGVED Trigger: GTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGGCAGGCCAGTGTAGATGACAGCAGGGAGGAGGACAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | TGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGGACTaGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WVTCEPPQSLWD*GLKVLSAFVAT Trigger: AGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTGAGGGGGCTCACAGGTCACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CCA 72 bp | CAGGCCAAGGCCCCTTGCGGACCCGCTGGCCACCTTTaGCTCTTGAAAGCTGAGAGAATGGATGAAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAKAPCGPAGHL*LLKAERMDEEA Trigger: AGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | GGCACAAGGCCACTGCCTAGAGCTACCTCACATGCCTaGTGCAATACCTGCAGTGTGGCCCACATGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTRPLPRATSHA*CNTCSVAHMVW Trigger: CCAGACCATGTGGGCCACACTGCAGGTATTGCACCAGGCATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTACACTGGCCTGCCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCGCTCTGCTCTTGCCCTaGCCCCTGTTCTTGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IYTGLPHHLPEPRGRRHTALLLP*PLFLEG Trigger: GCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGC...GGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGGCAGGCCAGTGTAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | TCATGGCATAGGCTAGTACCGTGGCGGCAGAACGGCTaGCACCCATCTTACAGTGGACTAGCACCCGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SWHRLVPWRQNG*HPSYSGLAPEC Trigger: GCACTCGGGTGCTAGTCCACTGTAAGATGGGTGTCAGCCGTTCTGCCGCCACGGTACTAGCCTATGCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTGCTCTTGCCCTTGCCCGTCCAAGTTCTTCTTTaGGGGTTTCCTGGCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEPRGRRHTRLALLLPLPVQVLL*GFPGFL Trigger: AAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGAC...GGGCAAGGGCAAGAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | AGGCCCCTTGCGGACCCGCTGGCCACCTTTGGCTCTTaGAAGCTGAGAGAATGGATGAAGAGGCTCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RPLADPLATFGS*KLREWMKRLFI Trigger: GATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | CTAGCACCCGAGTGCCCTGTGCTCTGGCATCCTCAATaGATCGATGTGTCTCCTTCCAGTGGGGCAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LAPECPVLWHPQ*IDVSPSSGAEA Trigger: AGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGATGCCAGAGCACAGGGCACTCGGGTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | CTGCCTAGAGCTACCTCACATGCCTGGTGCAATACCTaGAGTGTGGCCCACATGGTCTGGATAGAGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LPRATSHAWCNT*SVAHMVWIETG Trigger: GCCTGTCTCTATCCAGACCATGTGGGCCACACTGCAGGTATTGCACCAGGCATGTGAGGTAGCTCTAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | GTGTCCAACACCTGCCACAATTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCTGAAGCCTGTCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSNTCHNSARIA*SIFSCSEACPG Trigger: GCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTCGAGACTTCAGGGCAGGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PPGQHYEGQPQTVETSGQGHLWL*KAERMD Trigger: ATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCC...CTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | ACAAGGCCACTGCCTAGAGCTACCTCACATGCCTGGTaGAATACCTGCAGTGTGGCCCACATGGTCTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TRPLPRATSHAW*NTCSVAHMVWI Trigger: TATCCAGACCATGTGGGCCACACTGCAGGTATTGCACCAGGCATGTGAGGTAGCTCTAGGCAGTGGCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | AGCAGCAACATCTGGTTGTCAATAAAGTCACGGTACTaGTGGAGAGGACATCCCAGACGCAGCTCCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSNIWLSIKSRY*WRGHPRRSSRA Trigger: GGCCCTGGAGCTGCGTCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTATTGACAACCAGATGTTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCAGGCTCGCTCTGCTCTaGCCCTTGCCCCTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSSSFGVSWLPSRPITIRLALL*PLPLFL Trigger: CAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCT...GATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | ATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTTaGCCACCAGATGTCACACTGAAGCCCCCATCGCCG | + |
|
Preference number: 3 (lower is better) Translates to: MVWIETGLKIRL*PPDVTLKPPSP Trigger: CGGCGATGGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | CACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTaGTCTGAAGCCTGTCCAGGCTCAGCATTAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HNSARIACSIFS*SEACPGSALGG Trigger: ACCACCTAATGCTGAGCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR GCA 72 bp | GAAGTGACACTGTCCAGGTCACTGGTGTCCAACACCTaGCACAATTCAGCCAGGATCGCCTGCTCCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EVTLSRSLVSNT*HNSARIACSIF Trigger: AAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACACCAGTGACCTGGACAGTGTCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | AAGGTTGATGCGGGGCCGCAGTCCAAGTTCTTCTTTTaGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: KVDAGPQSKFFF*GFLASFQAHYH Trigger: ATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACTGCGGCCCCGCATCAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| 3UTR CCA 72 bp | CTGGCATCCTCAATGAATCGATGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGATTCCTCATCCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LASSMNRCVSFQ*GRSCADSSSQT Trigger: TGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGATGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCCAACACCTGCCACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTGGTCCAAGTTCTTCTTTaGGGGTTTCCTGGCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVQHLPQFSQDRLLHLFLVQVLL*GFPGFL Trigger: AAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGAC...CAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR TCA 72 bp | CCGATTCCTCATCCCAGACACGTACATTGTAATAGGTaGAGCGCTCAGGGAAGAAGTTGTCAATCTCCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PIPHPRHVHCNR*SAQGRSCQSPG Trigger: CCCGGGAGATTGACAACTTCTTCCCTGAGCGCTTCACCTATTACAATGTACGTGTCTGGGATGAGGAATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACGTACATTGTAATAGGTGAAGCGCTCAGGGAAGAAGTTGTCAATCTCCCGGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DTYIVIGEALREEVVNLPGHLWL*KAERMD Trigger: ATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCC...CGGGAGATTGACAACTTCTTCCCTGAGCGCTTCACCTATTACAATGTACGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCTGCTGGCCACCAGGGCACGGGCTGCCTCCAGCTaGGCTGCCTGCGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCPCPCSWKARVLLATRARAASS*AACAGA Trigger: GGCTCCAGCGCAGGCAGCCCAGCTGGAGGCAGCCCG...TGCCCTGGTGGCCAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGGGTTGGGGCGTACAATaGGCCGGAGCTCCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSWVGGWVTCEPPQSLWGWGVQ*AGAPAR Trigger: ACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACC...CCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGCGTGGCTCTGCCGGCTaGCAGTCAGAATGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSWVGGWVTCEPPQSLWRGSAG*QSECPG Trigger: ACCAGGGCATTCTGACTGCCAGCCGGCAGAGCCACG...CCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGCCGCAAAACTCTGCCTaGGCTGGAGCCGGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRVSWVGGWVTCEPPQSLPQNSA*AGAGLC Trigger: GCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGG...CAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCCGCAAAACTCTGCCTaGGCTGGAGCCGGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSPQNSA*AGAGLC Trigger: GCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGG...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGAGGCGGATATCATCCTaGGGCCTCAGCAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RVSWVGGWVTCEPPQSLWRRISS*GLSSST Trigger: GGTGGAGCTGCTGAGGCCGCAGGATGATATCCGCCT...CCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGGCCTGGTGCAATACCTaGAGTGTGGCCCACATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVSWVGGWVTCEPPQSLWAWCNT*SVAHMV Trigger: GACCATGTGGGCCACACTGCAGGTATTGCACCAGGC...CCACAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCGTGGCTCTGCCGGCTaGCAGTCAGAATGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSRGSAG*QSECPG Trigger: ACCAGGGCATTCTGACTGCCAGCCGGCAGAGCCACG...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGAGGCGGATATCATCCTaGGGCCTCAGCAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IRVSWVGGWVTCEPPQSLRRISS*GLSSST Trigger: GGTGGAGCTGCTGAGGCCGCAGGATGATATCCGCCT...CAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCGGCTCGCTCTGCTCTTaGCCTTGCCCCTGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSGSLCS*PCPCSW Trigger: CCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCC...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | ATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGCAGTCTGGTCCTCGGTaGGCTGTTCCTCACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRVSWVGGWVTCEPPQSLQSGPR*AVPHLR Trigger: CCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTG...CAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGAGAGL*VLPLGP Trigger: AGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGC...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037992.16 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAACCCAGGCAAGGGCACTaGCACCAGGCACAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQPRQGH*HQAQGH Trigger: GTGGCCTTGTGCCTGGTGGCAGTGCCCTTGCCTGGG...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAATGGGCCGGAGCTCCTaGACGTGGATCAGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGMGRSS*TWIRAC Trigger: GCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCAT...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCTGCCCTTTGTCAGTCTaGTCCTCGGTGGGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSCPLSV*SSVGCS Trigger: GGAACAGCCCACCGAGGACCAGACTGACAAAGGGCA...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCTCATCACCTTCCGGAGCCTAGGGGTAGAAGACATACCAGGCTCGCTCTGGCGCAGGAAGCCGTaGTTGGGGCGTACAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLITFRSLGVEDIPGSLWRRKP*LGRTMG Trigger: GCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCA...GAGCGAGCCTGGTATGTCTTCTACCCCTAGGCTCCGGAAGGTGATGAGGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCGCCAGGGGCTCCTCTaGGGAGACCACACCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGRQGLL*GDHTHF Trigger: AAAGTGGGTGTGGTCTCCCCAGAGGAGCCCCTGGCG...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGAGGCCCGTGTCCTGCTaGCCACCAGGGCAGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGRPVSC*PPGQHY Trigger: ATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCT...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | ACAGACTGTCGAGACTTCAGGGCAGGCCAAGGCCCCTaGCGGACCCGCTGGCCACCTTTGGCTCTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDCRDFRAGQGP*RTRWPPLALES Trigger: GCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTTGGCCTGCCCTGAAGTCTCGACAGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| CDS-3UTR TCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCTGGCCATCCACTCATTaGGGCAACCCTGGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSWPSTH*GNPGQS Trigger: ACTCTGACCAGGGTTGCCTCAATGAGTGGATGGCCA...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGGCAGCACTATGAAGGGCAACCACAGACTGTCGAGACTTCAGGGCAGGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGQHYEGQPQTVETSGQAGAGL*VLPLGP Trigger: AGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGC...CTGCCCTGAAGTCTCGACAGTCTGTGGTTGCCCTTCATAGTGCTGCCCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| CDS-3UTR GCA 90 bp | GAGATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCAGCTCCACCATGAGGTaGAGGTGCCGCTTTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EIRVSWVGGWVTCEPPQSSSTMR*RCRFCT Trigger: AGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCT...GCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAATCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGAGACCAGGCCCAGGGTaGAGCTGTGGGAACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGRPGPG*SCGNCC Trigger: ACAGCAGTTCCCACAGCTGCACCCTGGGCCTGGTCT...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGACCATCACCTCCCCACTaGCCCCTGGTTCTGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGPSPPH*PLVLVE Trigger: TTCCACCAGAACCAGGGGGCAGTGGGGAGGTGATGG...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCCCAGGGTGCAGCTGTaGGAACTGCTGTCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGPRVQL*ELLSGK Trigger: CTTCCCTGACAGCAGTTCCCACAGCTGCACCCTGGG...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCCGTCCAGGTACACCTaGGTATCACTCCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGPSRYT*VSLQRG Trigger: GCCCCTCTGGAGTGATACCCAGGTGTACCTGGACGG...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGGAGGCCCGGTCTTGCTaGGCCATGAGCAGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGEARSC*AMSSNI Trigger: GATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTC...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAGAGGCCCGGTCTTGCTaGGCCATGAGCAGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGEARSC*AMSSNI Trigger: GATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTC...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGGCTCCAGGAGACTGATGGAGCGCATGACCCCTCGAAGGTTGATGCGGGAGGCCCGGTCTTGCTaGGCCATGAGCAGCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SEGSRRLMERMTPRRLMREARSC*AMSSNI Trigger: GATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTC...CCGCATCAACCTTCGAGGGGTCATGCGCTCCATCAGTCTCCTGGAGCCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGAGGCCCGTGTCCTGCTaGCCACCAGGGCAGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTAVGEGGRRRVEWPQVERPVSC*PPGQHY Trigger: ATAGTGCTGCCCTGGTGGCCAGCAGGACACGGGCCT...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGATGCAGCTGTGGGAACTaGTGTCAGGGAAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGCSCGN*CQGSPP Trigger: GGGTGGACTTCCCTGACAGCAGTTCCCACAGCTGCA...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGGTGGGGCAGAAGCTGTaGCGATTCCTCATCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGVGQKL*RFLIPD Trigger: GTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCAC...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAACCACACCCACTTTCTaGTCCCAGACGTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGTTPTF*SQTWLC Trigger: GCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGT...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGCCATCACCTCCCCACTaGCCCCTGGTTCTGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVGEGGRRRVEWPQVEPSPPH*PLVLVE Trigger: TTCCACCAGAACCAGGGGGCAGTGGGGAGGTGATGG...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAACCCAGGGTGCAGCTGTaGGAACTGCTGTCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQPRVQL*ELLSGK Trigger: CTTCCCTGACAGCAGTTCCCACAGCTGCACCCTGGG...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAACCGTCCAGGTACACCTaGGTATCACTCCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQPSRYT*VSLQRG Trigger: GCCCCTCTGGAGTGATACCCAGGTGTACCTGGACGG...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | CCTAGGGGTAGAAGACATACCAGGCTCGCTCTGCTCTaGCCCTTGCCCCTGTTCTTGGAAGGCCCGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGRRHTRLALL*PLPLFLEGPCP Trigger: AGGACACGGGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTATGTCTTCTACCCCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAATCAGCAGCTCCACCATaGGGTGCAGGTGCCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQSAAPP*GAGAAF Trigger: AAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGA...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGCGCAGCTCCAGGGCCTaGCGGATCTCTTTAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTAVGEGGRRRVEWPQVERSSRA*RISLEV Trigger: CACTTCTAAAGAGATCCGTCAGGCCCTGGAGCTGCG...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTTGCAGCTGTGGGAACTaGTGTCAGGGAAGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSCSCGN*CQGSPP Trigger: GGGTGGACTTCCCTGACAGCAGTTCCCACAGCTGCA...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGCTCTTCATCTGAAGAGAAAACTTCTGGCAGGCCTCCCGCCTCTGGGGAGAGGTGGGGGAAGATaGGAGAGGCCCGGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEALHLKRKLLAGLPPLGRGGGR*ERPGLA Trigger: AGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCT...CCCCAGAGGCGGGAGGCCTGCCAGAAGTTTTCTCTTCAGATGAAGAGCCTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTGTGGGGCAGAAGCTGTaGCGATTCCTCATCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSVGQKL*RFLIPD Trigger: GTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCAC...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTACGTGGATCAGGGCTTaGTCCAGGTCCCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSTWIRA*SRSQPY Trigger: GTATGGCTGGGACCTGGAGCAAGCCCTGATCCACGT...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAACGTGGATCAGGGCTTaGTCCAGGTCCCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQTWIRA*SRSQPY Trigger: GTATGGCTGGGACCTGGAGCAAGCCCTGATCCACGT...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGACCACACCCACTTTCTaGTCCCAGACGTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAVGEGGRRRVEWPQVETTPTF*SQTWLC Trigger: GCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGT...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAACTCTGCTCTTGCCCTTaGCCCTGTTCTTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQLCSCP*PCSWKA Trigger: GGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAG...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGTCATCTACACTGGCCTaGCTCATCACCTTCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGSSTLA*LITFRS Trigger: GCTCCGGAAGGTGATGAGGCAGGCCAGTGTAGATGA...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGTTGGCGCAGGAAGCCGTaGTTGGGGCGTACAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLWDWGLKVLSAFVATSWRRKP*LGRTMG Trigger: GCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCA...ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | ATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGTGGAAGAGGTGGCAATaGTGTAGAAACTTCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRVSWVGGWVTCEPPQSLWKRWQ*CRNFRR Trigger: GCGCCTGAAGTTTCTACACCATTGCCACCTCTTCCA...CAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGACCCGCTGGCCACCTTTaGCTCTTGAAAGCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGPAGHL*LLKAER Trigger: TCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGG...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCAGGCACAAGGCCACTaGCTAGAGCTACCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSQAQGH*LELPHM Trigger: CATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCCTG...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGATGCTCCATCTTTTCCTaGTCTGAAGCCTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGCSIFS*SEACPG Trigger: GCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCA...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAGTGGCCCACATGGTCTaGATAGAGACAGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGVAHMV*IETGLK Trigger: CTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCAC...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAGCTACCTCACATGCCTaGTGCAATACCTGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGATSHA*CNTCSV Trigger: CACACTGCAGGTATTGCACCAGGCATGTGAGGTAGC...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGATGCTGTCATCTACACTaGCCTGCCTCATCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGCCHLH*PASSPS Trigger: GGAAGGTGATGAGGCAGGCCAGTGTAGATGACAGCA...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGTTCAGCAGCTCCACCATaGGGTGCAGGTGCCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSLWDWGLKVLSAFVATSSAAPP*GAGAAF Trigger: AAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGA...ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCTGGTGTCCAACACCTaGCACAATTCAGCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSLVSNT*HNSARI Trigger: GATCCTGGCTGAATTGTGGCAGGTGTTGGACACCAG...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGTGCCCCCTGGTTCTGGTaGAAGAGGTGGCAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLWDWGLKVLSAFVATSAPWFW*KRWQWC Trigger: ACACCATTGCCACCTCTTCCACCAGAACCAGGGGGC...ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | CAAGTAGAGGTGGGGGAAGATGCGAGAGGCCCGGTCTaGCTGGGCCATGAGCAGCAACATCTGGTTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVEVGEDARGPV*LGHEQQHLVVN Trigger: ATTGACAACCAGATGTTGCTGCTCATGGCCCAGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCTACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGAAACCCTGGTCAGAGTTaGGTTTCTCCTGGTAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGNPGQS*VSPGSK Trigger: CTTACTACCAGGAGAAACTCAACTCTGACCAGGGTT...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAAGAGTCAGCCTCAGATaGAACATTACTGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQRVSLR*NITVPS Trigger: GGAGGGGACAGTAATGTTGCATCTGAGGCTGACTCT...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTTCAGTTCTTCTCCCGTaGATACTACCAGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSSVLLP*ILPAGS Trigger: GCTACCTGCTGGTAGTATCCACGGGAGAAGAACTGA...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGTCCACCCCAAGCAGGATaGCCTCCTCACTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSLWDWGLKVLSAFVATSPPQAG*PPHSVL Trigger: AAGAACTGAGTGAGGAGGCCATCCTGCTTGGGGTGG...ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | AAGGCCCCTTGCGGACCCGCTGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAPCGPAGHLWL*KAERMDEEALH Trigger: ATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGGTCCGCAAGGGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235685.2 ENSMUST00000237501.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATCACCTCCCGCAGCTCCAGGGCCTaGCGGATCTCTTTAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFGVSWLPSRPITITSRSSRA*RISLEV Trigger: CACTTCTAAAGAGATCCGTCAGGCCCTGGAGCTGCG...GGAGGTGATGGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR TCA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGAAGAGGCTCTTCATCTaGAGAGAAAACTTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DCSRRGWKTQGGMATSRGKRLFI*RENFWQ Trigger: CTGCCAGAAGTTTTCTCTTCAGATGAAGAGCCTCTT...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGATAAAGTCACGGTACTaGTGGAGAGGACATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVGEGGRRRVEWPQVEIKSRY*WRGHPR Trigger: TCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTAT...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | CATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTaGACCACCAGATGTCACACTGAAGCCCCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGLDRDRLEDSA*TTRCHTEAPIA Trigger: GGCGATGGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| 3UTR CAA 72 bp | GCCCGGTCTTGCTGGGCCATGAGCAGCAACATCTGGTaGTCAATAAAGTCACGGTACTGCTGGAGAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSCWAMSSNIW*SIKSRYCWRGH Trigger: ATGTCCTCTCCAGCAGTACCGTGACTTTATTGACAACCAGATGTTGCTGCTCATGGCCCAGCAAGACCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
||
| CDS-3UTR TCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTCGCAGCTCCAGGGCCTaGCGGATCTCTTTAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSRSSRA*RISLEV Trigger: CACTTCTAAAGAGATCCGTCAGGCCCTGGAGCTGCG...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTGCCCCCTGGTTCTGGTaGAAGAGGTGGCAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSAPWFW*KRWQWC Trigger: ACACCATTGCCACCTCTTCCACCAGAACCAGGGGGC...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTTCCAAGTTCTTCTTTTaGGGTTTCCTGGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDCSRRGWKTQGGMATSSKFFF*GFLASF Trigger: GAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGA...ACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTAGCTCCACCATGAGGTaGAGGTGCCGCTTTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSSSTMR*RCRFCT Trigger: AGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCT...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | GGCCACCTTTGGCTCTTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGTGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHLWLLKAERMDEEALHLCVSFQ*GRSCAD Trigger: ATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACA...CAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGCGCCAGGGGCTCCTCTaGGGAGACCACACCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLRQGLL*GDHTHF Trigger: AAAGTGGGTGTGGTCTCCCCAGAGGAGCCCCTGGCG...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCTGTGGGACTGGGGACTGAAAGTGCTATCTGCCTTTGTGGCCACTAGTCTTACTCTGTTTTTCTaGAGTTCCTCCAGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLWDWGLKVLSAFVATSLTLFF*SSSRLA Trigger: TGCCAACCTGGAGGAACTTCAGAAAAACAGAGTAAG...ACTAGTGGCCACAAAGGCAGATAGCACTTTCAGTCCCCAGTCCCACAGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCACCCAGGCAAGGGCACTaGCACCAGGCACAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSPRQGH*HQAQGH Trigger: GTGGCCTTGTGCCTGGTGGCAGTGCCCTTGCCTGGG...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CGCAGTCCAAGTTCTTCTTTTGGGGTTTCCTGGCTTCCTTCCAGGCCCATTACCATAAAGTCACGGTACTaGTGGAGAGGACATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPSSSFGVSWLPSRPITIKSRY*WRGHPR Trigger: TCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTAT...GGTAATGGGCCTGGAAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGACTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGAGAGGTGGGGGAAGATaGGAGAGGCCCGGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLRGGGR*ERPGLA Trigger: AGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCT...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTGCTACCTCACATGCCTaGTGCAATACCTGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSATSHA*CNTCSV Trigger: CACACTGCAGGTATTGCACCAGGCATGTGAGGTAGC...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGCCTTGCCCCTGTTCTTaGAAGGCCCGTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLPCPCS*KARVLL Trigger: CAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGG...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACATGGGCCGGAGCTCCTaGACGTGGATCAGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNMGRSS*TWIRAC Trigger: GCAAGCCCTGATCCACGTGCAGGAGCTCCGGCCCAT...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGCTCTGCTCTTGCCCTTaGCCCTGTTCTTGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLLCSCP*PCSWKA Trigger: GGCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAG...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGATACCAGGCTCGCTCTaGTCTTGCCCTTGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLIPGSL*SCPCPC Trigger: ACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTAT...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLAGAGL*VLPLGP Trigger: CGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGC...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTTCAGTTCTTCTCCCGTaGATACTACCAGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSSVLLP*ILPAGS Trigger: GCTACCTGCTGGTAGTATCCACGGGAGAAGAACTGA...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCCGGAGCTCCTGCACGTaGATCAGGGCTTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLRSSCT*IRACSR Trigger: CCTGGAGCAAGCCCTGATCCACGTGCAGGAGCTCCG...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCGGTTGGGGCGTACAATaGGCCGGAGCTCCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLGWGVQ*AGAPAR Trigger: ACGTGCAGGAGCTCCGGCCCATTGTACGCCCCAACC...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCTGGCGCAGGAAGCCGTaGTTGGGGCGTACAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLWRRKP*LGRTMG Trigger: GCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCA...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTCTGGGTTGGGGCGTACAATaGGCCGGAGCTCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKAERMDEEALHLKRKLLGWGVQ*AGAPGI Trigger: GATGCCAGGAGCTCCGGCCCATTGTACGCCCCAACC...CAGAAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR GCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTATAAAGTCACGGTACTaGTGGAGAGGACATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSIKSRY*WRGHPR Trigger: TCTGGGATGTCCTCTCCAGCAGTACCGTGACTTTAT...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAAGAGGTGGGGGAAGATaGGAGAGGCCCGGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSRGGGR*ERPGLA Trigger: AGCAAGACCGGGCCTCTCGCATCTTCCCCCACCTCT...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGGCTCGCTCTGCTCTTaGCCTTGCCCCTGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSGSLCS*PCPCSW Trigger: CCAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCC...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGTCATCTACACTGGCCTaGCTCATCACCTTCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLSSTLA*LITFRS Trigger: GCTCCGGAAGGTGATGAGGCAGGCCAGTGTAGATGA...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACCAGTCTGGTCCTCGGTaGGCTGTTCCTCACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNQSGPR*AVPHLR Trigger: CCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTG...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAGTGCTGTGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: MKNLPGQRSSRTRRLSVLCVSFQ*GRSCAD Trigger: ATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACA...CAGCACTGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCCGGAGCTCCTGCACGTaGATCAGGGCTTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLRSSCT*IRACSR Trigger: CCTGGAGCAAGCCCTGATCCACGTGCAGGAGCTCCG...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCCCTTGCCCCTGTTCTTaGAAGGCCCGTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLPCPCS*KARVLL Trigger: CAGCAGGACACGGGCCTTCCAAGAACAGGGGCAAGG...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCATGGCGGCAGAACGGCTaGCACCCATCTTACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSWRQNG*HPSYSG Trigger: TCCACTGTAAGATGGGTGTCAGCCGTTCTGCCGCCA...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTAAGAGGCTCTTCATCTaGAGAGAAAACTTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSKRLFI*RENFWQ Trigger: CTGCCAGAAGTTTTCTCTTCAGATGAAGAGCCTCTT...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTCTTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTGTGGGGCAGAAGCTGTaGCGATTCCTCATCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLKAERMDEEALHLKRKLVGQKL*RFLIPD Trigger: GTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCAC...AAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCTGCCCTTTGTCAGTCTaGTCCTCGGTGGGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLCPLSV*SSVGCS Trigger: GGAACAGCCCACCGAGGACCAGACTGACAAAGGGCA...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | AGGATTGAGCCCTTAACAGGTAGATATGGGCTGAGACCTAAGGCTGCAGGAAGTTTCTGGTGGAAGAGGTaGCAATGGTGTAGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIEPLTGRYGLRPKAAGSFWWKR*QWCRNF Trigger: GAAGTTTCTACACCATTGCCACCTCTTCCACCAGAA...ACTTCCTGCAGCCTTAGGTCTCAGCCCATATCTACCTGTTAAGGGCTCAATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACCATCTTTTCCTGCTCTaGAGCCTGTCCAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNHLFLL*SLSRLS Trigger: GCTGAGCCTGGACAGGCTTCAGAGCAGGAAAAGATG...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTTGGCGGCAGAACGGCTaGCACCCATCTTACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTWRQNG*HPSYSG Trigger: TCCACTGTAAGATGGGTGTCAGCCGTTCTGCCGCCA...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACCAGGCACAAGGCCACTaGCTAGAGCTACCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNQAQGH*LELPHM Trigger: CATGTGAGGTAGCTCTAGGCAGTGGCCTTGTGCCTG...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCATACCAGGCTCGCTCTaGTCTTGCCCTTGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLIPGSL*SCPCPC Trigger: ACAGGGGCAAGGGCAAGAGCAGAGCGAGCCTGGTAT...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACCCACCCCAAGCAGGATaGCCTCCTCACTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNPPQAG*PPHSVL Trigger: AAGAACTGAGTGAGGAGGCCATCCTGCTTGGGGTGG...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAAGTCACGGTACTGCTaGAGAGGACATCCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLKSRYC*RGHPRR Trigger: GCGTCTGGGATGTCCTCTCCAGCAGTACCGTGACTT...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTAAGTCACGGTACTGCTaGAGAGGACATCCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKAERMDEEALHLKRKLKSRYC*RGHPRR Trigger: GCGTCTGGGATGTCCTCTCCAGCAGTACCGTGACTT...AAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTTCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCATGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSCVSFQ*GRSCAD Trigger: ATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACA...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACCCCGCTGGCCACCTTTaGCTCTTGAAAGCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNPAGHL*LLKAER Trigger: TCTCTCAGCTTTCAAGAGCCAAAGGTGGCCAGCGGG...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCCATCTTTTCCTGCTCTaGAGCCTGTCCAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLHLFLL*SLSRLS Trigger: GCTGAGCCTGGACAGGCTTCAGAGCAGGAAAAGATG...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLSARIA*SIFSCS Trigger: AGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGA...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCCTGGTGTCCAACACCTaGCACAATTCAGCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLLVSNT*HNSARI Trigger: GATCCTGGCTGAATTGTGGCAGGTGTTGGACACCAG...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCGTGGCCCACATGGTCTaGATAGAGACAGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLVAHMV*IETGLK Trigger: CTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCAC...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTAAGTCACGGTACTGCTaGAGAGGACATCCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTKSRYC*RGHPRR Trigger: GCGTCTGGGATGTCCTCTCCAGCAGTACCGTGACTT...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTGCTCCATCTTTTCCTaGTCTGAAGCCTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLCSIFS*SEACPG Trigger: GCCTGGACAGGCTTCAGAGCAGGAAAAGATGGAGCA...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR GCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTSARIA*SIFSCS Trigger: AGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGA...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCTGGAAGAGGTGGCAATaGTGTAGAAACTTCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLWKRWQ*CRNFRR Trigger: GCGCCTGAAGTTTCTACACCATTGCCACCTCTTCCA...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTTGCTGTCATCTACACTaGCCTGCCTCATCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTCCHLH*PASSPS Trigger: GGAAGGTGATGAGGCAGGCCAGTGTAGATGACAGCA...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGAGAGAATGGATGAAGAGGCTCTTCATCTGAAGAGAAAACTTCTGGCACTTACTCTGTTTTTCTaGAGTTCCTCCAGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAERMDEEALHLKRKLLALTLFF*SSSRLA Trigger: TGCCAACCTGGAGGAACTTCAGAAAAACAGAGTAAG...TGCCAGAAGTTTTCTCTTCAGATGAAGAGCCTCTTCATCCATTCTCTCAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTGTTTCCAGGGACTCTaGAGTCCTTGCCCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLCFQGL*SPCPLS Trigger: TGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACA...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTAACCCTGGTCAGAGTTaGGTTTCTCCTGGTAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTNPGQS*VSPGSK Trigger: CTTACTACCAGGAGAAACTCAACTCTGACCAGGGTT...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CCA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCATTCTGGTGGAAGAGGTaGCAATGGTGTAGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSFWWKR*QWCRNF Trigger: GAAGTTTCTACACCATTGCCACCTCTTCCACCAGAA...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR TCA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTTACTCTGTTTTTCTaGAGTTCCTCCAGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTLTLFF*SSSRLA Trigger: TGCCAACCTGGAGGAACTTCAGAAAAACAGAGTAAG...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| 3UTR CAA 72 bp | CAATACAAAGCCAAATACTATACAACTATGAAAAACTaGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QYKAKYYTTMKN*PGQRSSRTRRL Trigger: GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAGTATTTGGCTTTGTATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS GCA 90 bp | CCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCGTGGGTCCCACAGGCGTGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLGAPQNSACAGAGL*VLPLGPWVPQAWSG Trigger: GCCACTCCACGCCTGTGGGACCCACGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
||
| CDS GCA 90 bp | CCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCTGCGTGGGTCCCACAGGCGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGAPQNSACAGAGL*VLPLGPAWVPQAWS Trigger: ACTCCACGCCTGTGGGACCCACGCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 |
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| CDS CCA 90 bp | AGTCCCAGGACAGCCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTaGAGCCGGCCTCTGCGTCTTACCACTCGGTCCTGCGTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPRTAPRSTAKLCLR*SRPLRLTTRSCVGP Trigger: GGGACCCACGCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGGGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 |
||
| CDS GCA 90 bp | CCTGAAGTCCCAGGACAGCCCCTCGGAGCACCGCAAAACTCTGCCTaGGCTGGAGCCGGCCTCTGCGTCTTACCACTCGGTCCTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PEVPGQPLGAPQNSA*AGAGLCVLPLGPAW Trigger: CCACGCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGGGACTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 |
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| CDS GCA 90 bp | CCTGAAGTCCCAGGACAGCCCCTCGGAGCACCGCAAAACTCTGCCTaGGCTGGAGCCGGCCTCTGCGTCTTACCACTCGGTCCGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PEVPGQPLGAPQNSA*AGAGLCVLPLGPWV Trigger: GACCCACGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGGGACTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
||
| CDS CCA 90 bp | AGTCCCAGGACAGCCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTaGAGCCGGCCTCTGCGTCTTACCACTCGGTCCGTGGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPRTAPRSTAKLCLR*SRPLRLTTRSVGPT Trigger: TGTGGGACCCACGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGGGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
||
| CDS-3UTR CAA 90 bp | ATTCGGGTCAGTTGGGTGGGTGGGTGGGTGACCTGTGAGCCCCCTCAGAGCCTGGCTCTGCTCTTGCCCTaGCCCCTGTTCTTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRVSWVGGWVTCEPPQSLALLLP*PLFLEG Trigger: GCCTTCCAAGAACAGGGGCAAGGGCAAGAGCAGAGC...CAGGCTCTGAGGGGGCTCACAGGTCACCCACCCACCCACCCAACTGACCCGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS CCA 90 bp | CACTCAGTTCTTCTCCCGTGGATACTACCAGCAGGTAGCGAAGTCTaGGGGGTCGGGCTGCCTCCAGCTGGGCTGCCAGGCGGATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSVLLPWILPAGSEV*GVGLPPAGLPGGYH Trigger: ATGATATCCGCCTGGCAGCCCAGCTGGAGGCAGCCCGACCCCCCAGACTTCGCTACCTGCTGGTAGTATCCACGGGAGAAGAACTGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 ENSMUST00000237670.2 |
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| CDS CCA 90 bp | TCAGAATGCCCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTaGGGCGTACAATGGGCCGGAGCTCCTGGCATCCTCAATGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: SECPGRSVAGAGSRG*GVQWAGAPGILNES Trigger: CGATTCATTGAGGATGCCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CAA 90 bp | TCATCTGAAGAGAAAACTTCTGGCAGGCCTCCCGCCTCTGGGGTACTCTCTGACCGCAGGAAGCCGTGGTaGGGGCGTACAATGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSEEKTSGRPPASGVLSDRRKPW*GRTMGR Trigger: CCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCG...GTCAGAGAGTACCCCAGAGGCGGGAGGCCTGCCAGAAGTTTTCTCTTCAGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGAGGCTCGCTCTGCTCTaGCCCTTGCCCCTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DCSRRGWKTQGGMATSRGRLALL*PLPLFL Trigger: CAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCT...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS GCA 90 bp | GCCAGGCGGATATCATCCTGCGGCCTCAGCAGCTCCACCATGAGGTaGAGGTGCCGCTTTTGCACTTGTTTCCAGGGACTCTGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARRISSCGLSSSTMR*RCRFCTCFQGLWSP Trigger: AGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAGGCCGCAGGATGATATCCGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 90 bp | GGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTGGGGCGTACAATaGGCCGGAGCTCCTGGCATCCTCAATGAATCGATGTGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSVAGAGSRGWGVQ*AGAPGILNESMCLL Trigger: AAGGAGACACATCGATTCATTGAGGATGCCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCAAGGGACTGAGGGTTCCTCCATaGGCTCAGAGTCAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGEGGRRRVEWPQVEGKGLRVPP*AQSQPQ Trigger: CTGAGGCTGACTCTGAGCCAATGGAGGAACCCTCAG...TCCCTTGCCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAACACGTGGATCAGGGCTaGCTCCAGGTCCCAGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQHVDQG*LQVPAI Trigger: TATGGCTGGGACCTGGAGCAAGCCCTGATCCACGTG...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS GCA 90 bp | TCCTGCGGCCTCAGCAGCTCCACCATGAGGTGCAGGTGCCGCTTTTaGACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCTTTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCGLSSSTMRCRCRF*TCFQGLWSPCPLSV Trigger: GACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAGGCCGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS GCA 90 bp | CGGATATCATCCTGCGGCCTCAGCAGCTCCACCATGAGGTGCAGGTaGCGCTTTTGCACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RISSCGLSSSTMRCR*RFCTCFQGLWSPCP Trigger: AGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAGGCCGCAGGATGATATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGGGACTCTGGAGTCCTaGCCCTTTGTCAGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQGTLES*PFVSLV Trigger: GACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCC...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS GCA 90 bp | TGCAGGTGCCGCTTTTGCACTTGTTTCCAGGGACTCTGGAGTCCTTaGCCTTTGTCAGTCTGGTCCTCGGTGGGCTGTTCCTCACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRCRFCTCFQGLWSP*PLSVWSSVGCSSPE Trigger: CTCAGGTGAGGAACAGCCCACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 90 bp | TGCACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCTTTGTCAGTCTaGTCCTCGGTGGGCTGTTCCTCACCTGAGGGTTCCTCCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CTCFQGLWSPCPLSV*SSVGCSSPEGSSIG Trigger: GCCAATGGAGGAACCCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTGCCGCTTTTGCACTaGTTTCCAGGGACTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSRTAVGEGGRRRVEWPQVPLLH*FPGTLE Trigger: CTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCAC...TTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCAGGAGACTGATGGAGCGCATGACCCCTCGAAGGTTGATGCGGGGCCGAGCAGCAACATCTGGTaGTCAATAAAGTCACGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLQETDGAHDPSKVDAGPSSNIW*SIKSRY Trigger: GTACCGTGACTTTATTGACAACCAGATGTTGCTGCT...CGGCCCCGCATCAACCTTCGAGGGGTCATGCGCTCCATCAGTCTCCTGGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DCSRRGWKTQGGMATSRGGHLWL*KAERMD Trigger: ATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCC...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS TCA 90 bp | GTGGCCCACATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTTaGCCACCAGATGTCACACTGAAGCCCCTGCTGTCAGGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VAHMVWIETGLKIRL*PPDVTLKPLLSGKS Trigger: GGACTTCCCTGACAGCAGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237670.2 |
||
| CDS CCA 90 bp | CCGGAGCTCCTGGCATCCTCAATGAATCGATGTGTCTCCTTCCAGTaGGGCAGAAGCTGTGCCGATTCCTCATCCCAGACACGTACATTG | + |
|
Preference number: 5 (lower is better) Translates to: PELLASSMNRCVSFQ*GRSCADSSSQTRTL Trigger: CAATGTACGTGTCTGGGATGAGGAATCGGCACAGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGATGCCAGGAGCTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGGTCCAAGTTCTTCTTTaGGGGTTTCCTGGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DCSRRGWKTQGGMATSRGVQVLL*GFPGFL Trigger: AAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGAC...CCCTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS-3UTR CAA 90 bp | AGGACTGCAGTAGGAGAGGGTGGAAGACGCAGGGTGGAATGGCCACAAGTCGAGGGCCACCTTTGGCTCTaGAAAGCTGAGAGAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTAVGEGGRRRVEWPQVEGHLWL*KAERMD Trigger: ATCCATTCTCTCAGCTTTCAAGAGCCAAAGGTGGCC...CTCGACTTGTGGCCATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
||
| CDS GCA 90 bp | AGGTCACTGGTGTCCAACACCTGCCACAATTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCTGAAGCCCTGGTAGTGATCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLVSNTCHNSARIA*SIFSCSEALVVICP Trigger: TGGACAGATCACTACCAGGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACACCAGTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236794.2 |
||
| CDS GCA 90 bp | AACACCTGCCACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTaGTCTGAAGCCCTGGTAGTGATCTGTCCAGGCTCAGCATTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NTCHNSARIACSIFS*SEALVVICPGSALG Trigger: ACCTAATGCTGAGCCTGGACAGATCACTACCAGGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236794.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCACGCAGGAAGCCGTGGTaGGGGCGTACAATGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSRRKPW*GRTMGR Trigger: CCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCG...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCCGCAGGAAGCCGTGGTaGGGGCGTACAATGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLRRKPW*GRTMGR Trigger: CCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCG...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | TACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCCACGTGGATCAGGGCTaGCTCCAGGTCCCAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: YNYEKLAWPEIFKNKKTLHVDQG*LQVPAI Trigger: TATGGCTGGGACCTGGAGCAAGCCCTGATCCACGTG...GAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTAGGCTCGCTCTGCTCTaGCCCTTGCCCCTGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTRLALL*PLPLFL Trigger: CAAGAACAGGGGCAAGGGCAAGAGCAGAGCGAGCCT...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTGAGGGTTCCTCCATaGGCTCAGAGTCAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTLRVPP*AQSQPQ Trigger: CTGAGGCTGACTCTGAGCCAATGGAGGAACCCTCAG...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | CTATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTGGGACTCTGGAGTCCTaGCCCTTTGTCAGTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LYNYEKLAWPEIFKNKKTGTLES*PFVSLV Trigger: GACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCC...AGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | TGTACAATGAAACTAGGGTGTTATTACCCTAAAGGCACCTTAAACGGCTCTAACAGCAGCAACATCTGGTaGTCAATAAAGTCACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: CTMKLGCYYPKGTLNGSNSSNIW*SIKSRY Trigger: GTACCGTGACTTTATTGACAACCAGATGTTGCTGCT...GTTAGAGCCGTTTAAGGTGCCTTTAGGGTAATAACACCCTAGTTTCATTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | ACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCTCAAGCAGCAACATCTGGTaGTCAATAAAGTCACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: TTMKNLPGQRSSRTRRLSSSNIW*SIKSRY Trigger: GTACCGTGACTTTATTGACAACCAGATGTTGCTGCT...TGAGAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS-3UTR CAA 90 bp | TATACAACTATGAAAAACTTGCCTGGCCAGAGATCTTCAAGAACAAGAAGACTCGTCCAAGTTCTTCTTTaGGGGTTTCCTGGCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: YTTMKNLPGQRSSRTRRLVQVLL*GFPGFL Trigger: AAGGAAGCCAGGAAACCCCAAAAGAAGAACTTGGAC...GAGTCTTCTTGTTCTTGAAGATCTCTGGCCAGGCAAGTTTTTCATAGTTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 |
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| CDS GCA 72 bp | GCCTCCAGCTGGGCTGCCTGCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCTGCGTGGGTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: ASSWAACAGAGL*VLPLGPAWVPQ Trigger: CTGTGGGACCCACGCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGCCCAGCTGGAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237501.2 |
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| CDS GCA 72 bp | GTCCTGCGTGGGTCCCACAGGCGTGGAGTGGCCACTTaGCGGCGGCGAGCGACTCACTGTGACCAGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VLRGSHRRGVAT*RRRATHCDQRH Trigger: ATGGCGCTGGTCACAGTGAGTCGCTCGCCGCCGGCAAGTGGCCACTCCACGCCTGTGGGACCCACGCAGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 ENSMUST00000237501.2 |
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| CDS GCA 72 bp | TCGGTCCGTGGGTCCCACAGGCGTGGAGTGGCCACTTaGCGGCGGCGAGCGACTCACTGTGACCAGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SVRGSHRRGVAT*RRRATHCDQRH Trigger: ATGGCGCTGGTCACAGTGAGTCGCTCGCCGCCGGCAAGTGGCCACTCCACGCCTGTGGGACCCACGGACCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
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| CDS CCA 72 bp | ACCACTCGGTCCTGCGTGGGTCCCACAGGCGTGGAGTaGCCACTTGCCGGCGGCGAGCGACTCACTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: TTRSCVGPTGVE*PLAGGERLTVT Trigger: GGTCACAGTGAGTCGCTCGCCGCCGGCAAGTGGCCACTCCACGCCTGTGGGACCCACGCAGGACCGAGTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 ENSMUST00000237501.2 |
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| CDS GCA 72 bp | GCACCGCAAAACTCTGCCTGCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCGTGGGTCCCACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: APQNSACAGAGL*VLPLGPWVPQA Trigger: CGCCTGTGGGACCCACGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
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| CDS CCA 72 bp | CTTACCACTCGGTCCGTGGGTCCCACAGGCGTGGAGTaGCCACTTGCCGGCGGCGAGCGACTCACTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LTTRSVGPTGVE*PLAGGERLTVT Trigger: GGTCACAGTGAGTCGCTCGCCGCCGGCAAGTGGCCACTCCACGCCTGTGGGACCCACGGACCGAGTGGTAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
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| CDS GCA 72 bp | GCACCGCAAAACTCTGCCTGCGCTGGAGCCGGCCTCTaGGTCTTACCACTCGGTCCTGCGTGGGTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: APQNSACAGAGL*VLPLGPAWVPQ Trigger: CTGTGGGACCCACGCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 |
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| CDS GCA 72 bp | CCAGGACAGCCCCTCGGAGCACCGCAAAACTCTGCCTaGGCTGGAGCCGGCCTCTGCGTCTTACCACTCGGT | + |
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Preference number: 6 (lower is better) Translates to: PGQPLGAPQNSA*AGAGLCVLPLG Trigger: ACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 72 bp | ACAGCCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTaGAGCCGGCCTCTGCGTCTTACCACTCGGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TAPRSTAKLCLR*SRPLRLTTRSC Trigger: GCAGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037992.16 ENSMUST00000236794.2 |
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| CDS CCA 72 bp | ACAGCCCCTCGGAGCACCGCAAAACTCTGCCTGCGCTaGAGCCGGCCTCTGCGTCTTACCACTCGGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: TAPRSTAKLCLR*SRPLRLTTRSV Trigger: CACGGACCGAGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113852.6 |
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| CDS CCA 72 bp | CCTGGTAGGTCCGTAGCTGGCGCAGGAAGCCGTGGTTaGGGCGTACAATGGGCCGGAGCTCCTGGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: PGRSVAGAGSRG*GVQWAGAPGIL Trigger: GAGGATGCCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTACGGACCTACCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
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| CDS GCA 72 bp | AGTCCCAGGACAGCCCCTCGGAGCACCGCAAAACTCTaGCTGCGCTGGAGCCGGCCTCTGCGTCTTACCACT | + |
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Preference number: 6 (lower is better) Translates to: SPRTAPRSTAKL*LRWSRPLRLTT Trigger: AGTGGTAAGACGCAGAGGCCGGCTCCAGCGCAGGCAGAGTTTTGCGGTGCTCCGAGGGGCTGTCCTGGGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 72 bp | GTAGCTGGCGCAGGAAGCCGTGGTTGGGGCGTACAATaGGCCGGAGCTCCTGGCATCCTCAATGAATCGATG | + |
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Preference number: 6 (lower is better) Translates to: VAGAGSRGWGVQ*AGAPGILNESM Trigger: CATCGATTCATTGAGGATGCCAGGAGCTCCGGCCCATTGTACGCCCCAACCACGGCTTCCTGCGCCAGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
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| CDS CAA 72 bp | CCTCAGCAGCTCCACCATGAGGTGCAGGTGCCGCTTTaGCACTTGTTTCCAGGGACTCTGGAGTCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQQLHHEVQVPL*HLFPGTLESLP Trigger: GGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CAA 90 bp | ATCCTGCGGCCTCAGCAGCTCCACCATGAGGTGCAGGTGCCGCTTTaGCACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCTTTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ILRPQQLHHEVQVPL*HLFPGTLESLPFVS Trigger: ACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAGGCCGCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS TCA 72 bp | GGGCGTACAATGGGCCGGAGCTCCTGGCATCCTCAATaGATCGATGTGTCTCCTTCCAGTGGGGCAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRTMGRSSWHPQ*IDVSPSSGAEA Trigger: AGCTTCTGCCCCACTGGAAGGAGACACATCGATTCATTGAGGATGCCAGGAGCTCCGGCCCATTGTACGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235685.2 |
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| CDS GCA 72 bp | CTCAGCAGCTCCACCATGAGGTGCAGGTGCCGCTTTTaGACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSSSTMRCRCRF*TCFQGLWSPCP Trigger: AGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 72 bp | TCTGGAGTCCTTGCCCTTTGTCAGTCTGGTCCTCGGTaGGCTGTTCCTCACCTGAGGGTTCCTCCATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGVLALCQSGPR*AVPHLRVPPLA Trigger: AGCCAATGGAGGAACCCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CAA 90 bp | CAGTCTGGTCCTCGGTGGGCTGTTCCTCACCTGAGGGTTCCTCCATaGGCTCAGAGTCAGCCTCAGATGCAACATTACTGTCCCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QSGPRWAVPHLRVPP*AQSQPQMQHYCPLH Trigger: ATGGAGGGGACAGTAATGTTGCATCTGAGGCTGACTCTGAGCCAATGGAGGAACCCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS TCA 72 bp | TTTGTCAGTCTGGTCCTCGGTGGGCTGTTCCTCACCTaGGGGTTCCTCCATTGGCTCAGAGTCAGCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FVSLVLGGLFLT*GFLHWLRVSLR Trigger: TCTGAGGCTGACTCTGAGCCAATGGAGGAACCCTCAGGTGAGGAACAGCCCACCGAGGACCAGACTGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CCA 72 bp | TGCAGGTGCCGCTTTTGCACTTGTTTCCAGGGACTCTaGAGTCCTTGCCCTTTGTCAGTCTGGTCCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: CRCRFCTCFQGL*SPCPLSVWSSV Trigger: CACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CAA 72 bp | TGCACTTGTTTCCAGGGACTCTGGAGTCCTTGCCCTTaGTCAGTCTGGTCCTCGGTGGGCTGTTCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: CTCFQGLWSPCP*SVWSSVGCSSP Trigger: AGGTGAGGAACAGCCCACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CAA 72 bp | CCGCTTTTGCACTTGTTTCCAGGGACTCTGGAGTCCTaGCCCTTTGTCAGTCTGGTCCTCGGTGGGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PLLHLFPGTLES*PFVSLVLGGLF Trigger: GAACAGCCCACCGAGGACCAGACTGACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS CAA 72 bp | CAGCTCCACCATGAGGTGCAGGTGCCGCTTTTGCACTaGTTTCCAGGGACTCTGGAGTCCTTGCCCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: QLHHEVQVPLLH*FPGTLESLPFV Trigger: GACAAAGGGCAAGGACTCCAGAGTCCCTGGAAACAAGTGCAAAAGCGGCACCTGCACCTCATGGTGGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037992.16 ENSMUST00000113852.6 ENSMUST00000236794.2 |
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| CDS GCA 72 bp | GTGTCCAACACCTGCCACAATTCAGCCAGGATCGCCTaGTCCATCTTTTCCTGCTCTGAAGCCCTGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSNTCHNSARIA*SIFSCSEALVV Trigger: CACTACCAGGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTGGCAGGTGTTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236794.2 |
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| CDS CAA 90 bp | TGTGGCCCACATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTaGACCACCAGATGTCACACTGAAGCCCCTGCTGTCAGGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: CGPHGLDRDRLEDSA*TTRCHTEAPAVREV Trigger: GACTTCCCTGACAGCAGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATGTGGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237670.2 |
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| CDS GCA 72 bp | CACAATTCAGCCAGGATCGCCTGCTCCATCTTTTCCTaGTCTGAAGCCCTGGTAGTGATCTGTCCAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: HNSARIACSIFS*SEALVVICPGS Trigger: TGAGCCTGGACAGATCACTACCAGGGCTTCAGAGCAGGAAAAGATGGAGCAGGCGATCCTGGCTGAATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236794.2 |
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| CDS CAA 72 bp | CATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTaGACCACCAGATGTCACACTGAAGCCCCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HGLDRDRLEDSA*TTRCHTEAPAV Trigger: GACAGCAGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237670.2 |
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| CDS TCA 72 bp | ATGGTCTGGATAGAGACAGGCTTGAAGATTCGGCTTTaGCCACCAGATGTCACACTGAAGCCCCTGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: MVWIETGLKIRL*PPDVTLKPLLS Trigger: TGACAGCAGGGGCTTCAGTGTGACATCTGGTGGTCAAAGCCGAATCTTCAAGCCTGTCTCTATCCAGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237670.2 |
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