Pregenerated sensors for SSC5D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035279Ensembl transcript IDs: ENSMUST00000057612.9
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGCCGGCCAGAGCACCTaGTGGGTCCAGCCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFAGQST*WVQPPG Trigger: GCCTGGTGGCTGGACCCAGCAGGTGCTCTGGCCGGC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGCCACCAGGCGCAACTaGGGGGACCCAGCTTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFATRRN*GDPASG Trigger: GCCCGAAGCTGGGTCCCCCCAGTTGCGCCTGGTGGC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCCAGCCAAAGCGGCCTaGTGCGGGGTCTGGTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVPAKAA*CGVWLP Trigger: CGGCAACCAGACCCCGCAGCAGGCCGCTTTGGCTGG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGTGGTGGCTGAGGTaGGCAGCGGCCGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRWWLR*AAAGAQ Trigger: CTGAGCGCCGGCCGCTGCCCACCTCAGCCACCACCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTGGGCACAGGAGTGCTaGGGGGCCAGGCCACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVWAQEC*GARPPL Trigger: CAGAGGTGGCCTGGCCCCCCAGCACTCCTGTGCCCA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGACATCCGTGGGGACCTaGGACCAGTCGCAGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVTSVGT*DQSQPL Trigger: GAGCGGCTGCGACTGGTCTCAGGTCCCCACGGATGT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACCCCAACGTCCACCGTaGCAGACTTCCAGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRPQRPP*QTSRRP Trigger: CGGCCGCCTGGAAGTCTGGCACGGTGGACGTTGGGG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCCCCATCGTCCACCATaGCACACCTCCAGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFPHRPP*HTSRRP Trigger: TGGCCGCCTGGAGGTGTGGCATGGTGGACGATGGGG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCCCCAGCGTCCGTCATaGCATACCTCCAGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFPQRPS*HTSSRP Trigger: TGGCCGGCTGGAGGTATGGCATGACGGACGCTGGGG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACAGCCAGATGGGGCCTaGACCCCAGCCAAAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRQPDGA*TPAKAA Trigger: GGCCGCTTTGGCTGGGGTGCAGGCCCCATCTGGCTG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGGACTTGGCGCTCCTaGCGGTCCTGCTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFRTWRS*RSCSRT Trigger: GGTCCTGGAGCAGGACCGGCAGGAGCGCCAAGTCCT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGGCTCGGGTGGACTTaGTCTGCTTGGGTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGLGWT*SAWVAG Trigger: CCCGGCCACCCAAGCAGACCAAGTCCACCCGAGCCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCGGCCAGCACAGCCGTaGGGACCATCAGCAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFRPAQP*GPSARR Trigger: ACGCCTTGCTGATGGTCCCCACGGCTGTGCTGGCCG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCCCAGCAGGCCACTGTaGCATCCCGGATGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVPSRPL*HPGCPS Trigger: GCTGGGACATCCGGGATGCCACAGTGGCCTGCTGGG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCAGGAGATGAGGTGGTaGCTGAGGTGGGCAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVQEMRW*LRWAAA Trigger: GGCCGCTGCCCACCTCAGCCACCACCTCATCTCCTG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACCCAGTGCCAGGACTTaGCGCTCCTGCCGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRPSART*RSCRSC Trigger: GCAGGACCGGCAGGAGCGCCAAGTCCTGGCACTGGG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGGAGCCAGGCATCCTaGTCTCTACCCAGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGSQAS*SLPSPG Trigger: CCCTGGGCTGGGTAGAGATCAGGATGCCTGGCTCCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGCTGCCCCAACCCCTaGGCAGCCTCTACCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFSCPNP*AASTNW Trigger: CCAGTTGGTAGAGGCTGCTCAGGGGTTGGGGCAGCT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCAGCACCGAGAGGCATaGCATCACACACGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVQHREA*HHTRPQ Trigger: CTGGGGCCGTGTGTGATGGCATGCCTCTCGGTGCTG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGAGGCCAAGGGCCTaGTGGGCCTGGCATCTGACC | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRRPRA*WAWHLT Trigger: GGTCAGATGCCAGGCCCAGCAGGCCCTTGGCCTCCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCCCCAGAGTCCAGCATaGCACACCTCTAGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVPQSPA*HTSSRP Trigger: TGGCCGGCTAGAGGTGTGGCATGCTGGACTCTGGGG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACGCTCCTGCCGGTCCTaGTCCAGGACCCAGGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRSCRS*SRTQVS Trigger: ACTGACCTGGGTCCTGGAGCAGGACCGGCAGGAGCG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCCTGCATCCTCGGTGTaGTCACAGTTGCTCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFPASSV*SQLLRP Trigger: GGGCCGGAGCAACTGTGACCACACCGAGGATGCAGG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTTCGGGCCCAGGCTCTaGAGGGGCAGTAGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVFGPRL*RGSRRS Trigger: GCTTCTCCTACTGCCCCTCCAGAGCCTGGGCCCGAA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAACCTGCACGGGCCCTTaGAGCTGGAAAGGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRTCTGP*SWKGVA Trigger: GGCCACCCCTTTCCAGCTCCAAGGGCCCGTGCAGGT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGAGGTTGAGGACTTGTaGCGGGGTGAGGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVEVEDL*RGEGSW Trigger: CCAGGAGCCCTCACCCCGCCACAAGTCCTCAACCTC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCTGTGGTGGTGGTCATaGGCACAGGAGTGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFLWWWS*AQECWG Trigger: CCCCCAGCACTCCTGTGCCCATGACCACCACCACAG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCCGGCAGACCACAGCTaGGTCTCTCATGTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVPADHS*VSHVPA Trigger: AGCTGGGACATGAGAGACTCAGCTGTGGTCTGCCGG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGCATCCCAGGGGGCTaGGTGGTTGGTCTCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGIPGG*VVGLLA Trigger: TGCAAGGAGACCAACCACTCAGCCCCCTGGGATGCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGGTGTTGGGCTGCCTaGAAGCTCTGGGGAACGTGT | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGCWAA*KLWGTC Trigger: ACACGTTCCCCAGAGCTTTCAGGCAGCCCAACACCC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGGATGCTGGTGGGGTaGGAGGCTGTAAACGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGMLVG*EAVNGC Trigger: ACAGCCGTTTACAGCCTCTCACCCCACCAGCATCCC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGATCCCCACCAGCATTaGAAGGAGGCAGGCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFDPHQH*KEAGQA Trigger: GGCTTGGCCTGCCTCCTTGCAATGCTGGTGGGGATC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGCCATACAGGCCCAGTaGCCTCCCCGAAGAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRAIQAQ*PPRRRH Trigger: GTGCCTTCTTCGGGGAGGGCACTGGGCCTGTATGGC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGTGCAGACCAGCCCTaGATCCTCGGTGTGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGADQP*ILGVVT Trigger: TGTGACCACACCGAGGATGCAGGGCTGGTCTGCACC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGAAGGCGTATCCTGGGTaGAGGACCGGTGCAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVKAYPG*RTGADQ Trigger: CTGGTCTGCACCGGTCCTGCACCCAGGATACGCCTT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTCGTGGTCACAGTTGTaGTTCCCCCATGCCCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSWSQL*FPHAPE Trigger: CTCGGGGGCATGGGGGAAGCACAACTGTGACCACGA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCAGGAGCCAGAGGTCTaGCGTGAGCCAGAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVQEPEV*REPEGS Trigger: AGAGCCTTCTGGCTCACGGCAGACCTCTGGCTCCTG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGACCCAGGTCAGTCTCTaGAGCTGGTCACCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVTQVSL*SWSPTS Trigger: GGAGGTGGGTGACCAGCTGCAGAGACTGACCTGGGT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAAGCAGGAGATGAGGTaGTGGCTGAGGTGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFKQEMR*WLRWAA Trigger: CGCTGCCCACCTCAGCCACCACCTCATCTCCTGCTT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACGGGGTGAGGGCTCCTaGGTTGCTGAGGGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRGEGS*VAEGLW Trigger: CCACAAACCCTCAGCAACCCAGGAGCCCTCACCCCG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGCCAGAAGGCTCTGGTaGAGAGGAGGAAGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVARRLW*RGGSRR Trigger: TCTCCTGCTTCCTCCTCTTCACCAGAGCCTTCTGGC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGCTTTGAGTCTGGGATaGGTTGTGGCCAGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVALSLG*VVARSQ Trigger: CTGGCTCCTGGCCACAACTCATCCCAGACTCAAAGC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGGTTGGCCCTTGAGTaGGGTGGTCTGAAGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGLALE*GGLKLS Trigger: ACTCAGCTTCAGACCACCTCACTCAAGGGCCAACCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGCAGGAACTGTAGGCTaGACAGCACCGAGAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVAGTVG*TAPRGM Trigger: CATGCCTCTCGGTGCTGTGCAGCCTACAGTTCCTGC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTAGGGAGGTTGGGGTaGCTGGGGCCCTGGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRVGRLG*LGPWNV Trigger: AACATTCCAGGGCCCCAGGCACCCCAACCTCCCTAC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGTGGTATGTGAGGTCTaGCTGTGGGGAGCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFVVCEV*LWGASV Trigger: CACTGAGGCTCCCCACAGGCAGACCTCACATACCAC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGACAAGGCAAAGGTTaGTGGGGAGGGAAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGQGKG*WGGKSW Trigger: CCAGGACTTCCCTCCCCAGCAACCTTTGCCTTGTCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGTTCTGCGTCTGGGATaGGTCTGTGGATGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFVLRLG*VCGWGF Trigger: GAAGCCCCATCCACAGACGCATCCCAGACGCAGAAC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCGCAGCCGCTCTTGGTaGGGAGCTCCATTTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVRSRSW*GAPFVS Trigger: ACTGACAAATGGAGCTCCCCACCAAGAGCGGCTGCG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGAGTCGCAGCCGCTCTTaGTGGGGAGCTCCATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSRSRS*WGAPFV Trigger: GACAAATGGAGCTCCCCACCAAGAGCGGCTGCGACT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGGCCCTGGAATGTTTaGTGGTTGGCATCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGPWNV*WLASQG Trigger: CCCCTGGGATGCCAACCACCAAACATTCCAGGGCCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGGTGCCTGGGGCCCTaGAATGTTTGGTGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGCLGP*NVWWLA Trigger: TGCCAACCACCAAACATTCCAGGGCCCCAGGCACCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCCACTGTGGTCCCTTTaGTCAGGTCCTCTCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVPLWSL*SGPLRK Trigger: CTTCCGGAGAGGACCTGACCAAAGGGACCACAGTGG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGTCTGGGATGAGTTGTaGCCAGGAGCCAGAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFVWDEL*PGARGL Trigger: CAGACCTCTGGCTCCTGGCCACAACTCATCCCAGAC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGCCCTTCAGGGGAGGTaGGTGTTGGGCTGCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRALQGR*VLGCLK Trigger: TTTCAGGCAGCCCAACACCCACCTCCCCTGAAGGGC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGCTGTGTGGGGGTCCTaGTGTTCATGGGGAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRAVWGS*CSWGGL Trigger: CAGACCTCCCCATGAACACCAGGACCCCCACACAGC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCTCCACCAAGGCAGGTaGCTCACAAGCCATGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVLHQGR*LTSHDP Trigger: AGGGTCATGGCTTGTGAGCCACCTGCCTTGGTGGAG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTCTCCTCCTCCTCTGTaGTGGTGGTCATGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSPPPL*WWSWAQ Trigger: CTGTGCCCATGACCACCACCACAGAGGAGGAGGAGA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACCTGCGTCCTCCTCATaGGAGCAGATATGGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRPASSS*EQIWAF Trigger: GAAGGCCCATATCTGCTCTCATGAGGAGGACGCAGG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCTGTAGCCAGTGCAGGTaGGCACCACGTCTTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFCSQCR*APRLLR Trigger: ACGAAGAAGACGTGGTGCTCACCTGCACTGGCTACA...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGTCCCCTCCTGCTTTaGGTCTGGGATGAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGPLLL*VWDELW Trigger: CCACAACTCATCCCAGACTCAAAGCAGGAGGGGACC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGGAAGTCCTGGGGTaGGTAGAGATGGTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRREVLG*VEMVWG Trigger: CCCCCAAACCATCTCTACTCACCCCAGGACTTCCCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTCCTGGAGTCAGCTCTaGGGTAGGAGAAAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSWSQL*GRRKPA Trigger: AGCAGGCTTTCTCCTACCTCAGAGCTGACTCCAGGA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGGGTGGCAGGGGTTaGGGAAGGGTGAGTATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRGGRG*GRVSIG Trigger: ACCAATACTCACCCTTCCTCAACCCCTGCCACCCCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGCTTCTGGGTGGTTTaGAGGCATCTGTGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGFWVV*RHLWVV Trigger: CACTACCCACAGATGCCTTCAAACCACCCAGAAGCC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTACACAGACGACGCCTaGGTCCTCCTCATGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVYTDDA*VLLMRA Trigger: TGCTCTCATGAGGAGGACGCAGGCGTCGTCTGTGTA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCATTCTGGGAGCTTGCTaGTGGTTGGGGAGCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFILGAC*WLGSVS Trigger: ACTCACGCTCCCCAACCAGCAGCAAGCTCCCAGAAT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGAAGCCTGTGTGCTGTaGTGTTGCTGTCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVEACVL*CCCPLQ Trigger: CTGCAGTGGACAGCAACAGCACAGCACACAGGCTTC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGACCAGATGGGCCCAGTaGCAGGGCCATAGTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVTRWAQ*QGHSEF Trigger: AAACTCACTATGGCCCTGGCACTGGGCCCATCTGGT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGTGGGTGTTGGGCTaGCTGAAAGCTCTGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRWVLG*LKALGN Trigger: GTTCCCCAGAGCTTTCAGGCAGCCCAACACCCACCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCTGGGAGCTTGCTGCTaGTTGGGGAGCGTGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFLGACC*LGSVSY Trigger: ATAACTCACGCTCCCCAACCAGCAGCAAGCTCCCAG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGAATGTTTGGTGGTTaGCATCCCAGGGGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGMFGG*HPRGLS Trigger: ACTCAGCCCCCTGGGATGCCAACCACCAAACATTCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGTGTTCTCACCCGATaGCTCCAAAGAGGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGVLTR*LQRGLR Trigger: CCTCAGACCTCTTTGGAGCCATCGGGTGAGAACACC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGTCATCCAACCAGATaGGCCCAGTGCCAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRCHPTR*AQCQGH Trigger: ATGGCCCTGGCACTGGGCCCATCTGGTTGGATGACA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACAAGGCAAAGGTTGCTaGGGAGGGAAGTCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRQGKGC*GGKSWG Trigger: ACCCCAGGACTTCCCTCCCCAGCAACCTTTGCCTTG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGGTCCTGGTGTTCATaGGGAGGTCTGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGSWCS*GGLRSQ Trigger: CTGACTCCTCAGACCTCCCCATGAACACCAGGACCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGTCTGGCTTCTGGGTaGTTTGAAGGCATCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGLASG*FEGICG Trigger: CCCACAGATGCCTTCAAACCACCCAGAAGCCAGACC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGAGCCAGCTCCAACTaGAAGGGTCTGAGATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGASSN*KGLRWY Trigger: ATACCATCTCAGACCCTTTCAGTTGGAGCTGGCTCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGAACAGACCCCTTCCTaGAGGTGTATCCCACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFREQTPS*RCIPRP Trigger: TGGACGTGGGATACACCTTCAGGAAGGGGTCTGTTC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATTAGGGGTTGGCCCTTaGGTGAGGTGGTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRLGVGP*VRWSEA Trigger: AGCTTCAGACCACCTCACTCAAGGGCCAACCCCTAA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCTAGAGGTCCCCTCCTaGTTTGAGTCTGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFLEVPS*FESGMS Trigger: ACTCATCCCAGACTCAAAGCAGGAGGGGACCTCTAG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCCCGACATCCTCATTGTaGGCGCAATTGTGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFPTSSL*AQLCFP Trigger: GGGGAAACACAATTGCGCCCACAATGAGGATGTCGG...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGGCAGAAGGTTTGGTaGTTAGCTCTCCTGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRWQKVW*LALLGA Trigger: GGCTCCCAGGAGAGCTAACCACCAAACCTTCTGCCA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGACTGGCAGAAGGTTTaGTGGTTAGCTCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVDWQKV*WLALLG Trigger: TCCCAGGAGAGCTAACCACCAAACCTTCTGCCAGTC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTCCCTGGAACCTTTGTaGGTTTCTGTGGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSLEPL*VSVAHW Trigger: CCAGTGTGCCACAGAAACCCACAAAGGTTCCAGGGA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGGACTCCAGCAGTTaGGGTGGTAGCTGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRDSSS*GGSWIL Trigger: CAAGATCCAGCTACCACCCCAACTGCTGGAGTCCCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGACCACGTCTTCTTCGTaGTCACAGTTGTGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVTTSSS*SQLCFP Trigger: GGGGAAGCACAACTGTGACCACGAAGAAGACGTGGT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAACTTCTTGGGGACCTTaGGTGGACTGTGACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRTSWGP*VDCDTT Trigger: TGTGGTGTCACAGTCCACTCAAGGTCCCCAAGAAGT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGCTGGATCTTGGGATaGTTCCAGAGAGCCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRSWILG*FQRAFG Trigger: ACCGAAGGCTCTCTGGAATCATCCCAAGATCCAGCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGGGCAGTCACTCAGTaGCATCTCACTTCCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGAVTQ*HLTSFT Trigger: TGTAAAGGAAGTGAGATGTCACTGAGTGACTGCCCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTTCATGGGGAGGTCTaGGGAGTCAGAACTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRVHGEV*GVRTFW Trigger: CCAGAAAGTTCTGACTCCTCAGACCTCCCCATGAAC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR TCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGCTCACAAGCCATaGCCCTTACTGGTGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRVAHKP*PLLVVM Trigger: CATTACCACCAGTAAGGGTCATGGCTTGTGAGCCAC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGACAGAAGCCTGTGTaGTGTGCTGTTGCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRQKPV*CAVAVH Trigger: GTGGACAGCAACAGCACAGCACACAGGCTTCTGTCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAAGAGCTCTAGGTTCTaGGTCTGGGATGCGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRKSSRF*VWDASV Trigger: CACAGACGCATCCCAGACGCAGAACCTAGAGCTCTT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCTTTGTGGGTTTCTGTaGCACACTGGAGGTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVLCGFL*HTGGET Trigger: AGTCTCACCTCCAGTGTGCCACAGAAACCCACAAAG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACTGGTCATCCGTGTCTaGAAGGTTCTGTGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRLVIRV*KVLCCW Trigger: CCAGCAACACAGAACCTTCCAGACACGGATGACCAG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGTCTTTCGGGAGGATaGAAGGGACTCTGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRCLSGG*KGLCRG Trigger: ACCCCTACAGAGTCCCTTCCATCCTCCCGAAAGACA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCTGGCCCAAAAGGATCTaGGTTGTGATTAGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFWPKRI*VVIRGW Trigger: CCAACCCCTAATCACAACCCAGATCCTTTTGGGCCA...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGGAAGGTTCTGTGTTaGTGGAGAGGGGACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRWKVLC*WRGDFS Trigger: ACTGAAGTCCCCTCTCCAGCAACACAGAACCTTCCA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGAGGGGGCTGAGTGGTTaGTCTCCTTGCATTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVRGLSG*SPCIFS Trigger: ACTAAAAATGCAAGGAGACCAACCACTCAGCCCCCT...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGTGGGGAGCCTCAGTaGTCAGTCTCTTTGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRCGEPQ*SVSLVT Trigger: AGTTACCAAAGAGACTGACCACTGAGGCTCCCCACA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAAGGTTCTGTGTTGCTaGAGAGGGGACTTCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLYIRWLLFKSILSTVNFKVLCC*RGDFSV Trigger: AACACTGAAGTCCCCTCTCCAGCAACACAGAACCTT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGGAAGGGTGAGTATTaGTGGGAGGTTGAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRKGEY*WEVEDL Trigger: CAAGTCCTCAACCTCCCACCAATACTCACCCTTCCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR GCA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTGGGATTATTTCAGGTaGTGGTGTTGTATCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIRWLLFKSILSTVNFRVWDYFR*WCCIRS Trigger: GGACCTGATACAACACCAGCACCTGAAATAATCCCA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAACTTCTTGGTACTCTTaGGAGCTTTCCCTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRTSWYS*ELSLEP Trigger: AGGTTCCAGGGAAAGCTCCCAAGAGTACCAAGAAGT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGAGTCAGAACTTTCTaGGATTATTTCAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGVRTF*DYFRCW Trigger: CCAGCACCTGAAATAATCCCAGAAAGTTCTGACTCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR GCA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGTGGTTGGTCTCCTTaGATTTTTAGTCACCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LYIRWLLFKSILSTVNFRSGWSP*IFSHPL Trigger: AAGTGGGTGACTAAAAATGCAAGGAGACCAACCACT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | TCCAGCCGGCCAGAGCACCTGCTGGGTCCAGCCACCAGGCGCAACTaGGGGGACCCAGCTTCGGGCCCAGGCTCTGGAGGGGCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRPEHLLGPATRRN*GDPASGPGSGGAVG Trigger: TCCTACTGCCCCTCCAGAGCCTGGGCCCGAAGCTGGGTCCCCCCAGTTGCGCCTGGTGGCTGGACCCAGCAGGTGCTCTGGCCGGCTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 90 bp | AACTGGGCTAGGCCCAGTGCCAGGACTTGGCGCTCCTGCCGGTCCTaGTCCAGGACCCAGGTCAGTCTCTGCAGCTGGTCACCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NWARPSARTWRSCRS*SRTQVSLCSWSPTS Trigger: GGAGGTGGGTGACCAGCTGCAGAGACTGACCTGGGTCCTGGAGCAGGACCGGCAGGAGCGCCAAGTCCTGGCACTGGGCCTAGCCCAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | ATCAGCAAGGCGTATCCTGGGTGCAGGACCGGTGCAGACCAGCCCTaGATCCTCGGTGTGGTCACAGTTGCTCCGGCCCCAGGGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ISKAYPGCRTGADQP*ILGVVTVAPAPGAS Trigger: CGAAGCCCCTGGGGCCGGAGCAACTGTGACCACACCGAGGATGCAGGGCTGGTCTGCACCGGTCCTGCACCCAGGATACGCCTTGCTGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | AGCCGTGGGGACCATCAGCAAGGCGTATCCTGGGTGCAGGACCGGTaGAGACCAGCCCTGCATCCTCGGTGTGGTCACAGTTGCTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGDHQQGVSWVQDR*RPALHPRCGHSCSG Trigger: GCCGGAGCAACTGTGACCACACCGAGGATGCAGGGCTGGTCTGCACCGGTCCTGCACCCAGGATACGCCTTGCTGATGGTCCCCACGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | ACTTGGCGCTCCTGCCGGTCCTGCTCCAGGACCCAGGTCAGTCTCTaGAGCTGGTCACCCACCTCCCTCACAGCACCTACCAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TWRSCRSCSRTQVSL*SWSPTSLTAPTSST Trigger: GGTGGAGCTGGTAGGTGCTGTGAGGGAGGTGGGTGACCAGCTGCAGAGACTGACCTGGGTCCTGGAGCAGGACCGGCAGGAGCGCCAAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 90 bp | CTGATCTCTACCCAGCCCAGGGAGCCAGCTCCAACTGAAAGGGTCTaGGATGGTATCCAGGCCGGGGGTCCCAGTGCAGGTAACCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LISTQPREPAPTERV*DGIQAGGPSAGNPD Trigger: GTCGGGGTTACCTGCACTGGGACCCCCGGCCTGGATACCATCTCAGACCCTTTCAGTTGGAGCTGGCTCCCTGGGCTGGGTAGAGATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | AGGGGCAGTAGGAGAAGCAGAAGGAGGCCAAGGGCCTGCTGGGCCTaGCATCTGACCCACGGAGGTAGACAGAAGCCTGTGTGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSRRSRRRPRACWA*HLTHGGRQKPVCCA Trigger: AGCACAGCACACAGGCTTCTGTCTACCTCCGTGGGTCAGATGCCAGGCCCAGCAGGCCCTTGGCCTCCTTCTGCTTCTCCTACTGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | GCCTCTCCTCCTCCTCTGTGGTGGTGGTCATGGGCACAGGAGTGCTaGGGGGCCAGGCCACCTCTGCTAGCCTCTTTACAGTCTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPPPLWWWSWAQEC*GARPPLLASLQSHS Trigger: TGAGTGAGACTGTAAAGAGGCTAGCAGAGGTGGCCTGGCCCCCCAGCACTCCTGTGCCCATGACCACCACCACAGAGGAGGAGGAGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | TGCTGGGCCTGGCATCTGACCCACGGAGGTAGACAGAAGCCTGTGTaGTGTGCTGTTGCTGTCCACTGCAGGAACTGTAGGCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CWAWHLTHGGRQKPV*CAVAVHCRNCRLHS Trigger: GCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGCACACAGGCTTCTGTCTACCTCCGTGGGTCAGATGCCAGGCCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | TTTCCGTTGTGGTGGCCTCAGAGGTCACTTCTTGGGGACCTTGAGTaGACTGTGACACCACAGGCTCTGAGGTCCACTCCCAGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: FPLWWPQRSLLGDLE*TVTPQALRSTPRGP Trigger: GGGTCCCCTGGGAGTGGACCTCAGAGCCTGTGGTGTCACAGTCCACTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 90 bp | TGTCTTTCGGGAGGATGGAAGGGACTCTGTAGGGGTGGCAGGGGTTaGGGAAGGGTGAGTATTGGTGGGAGGTTGAGGACTTGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSGGWKGLCRGGRG*GRVSIGGRLRTCGG Trigger: CCCGCCACAAGTCCTCAACCTCCCACCAATACTCACCCTTCCTCAACCCCTGCCACCCCTACAGAGTCCCTTCCATCCTCCCGAAAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | GAGGGGCCGGACTCCGAGGCTAGAAAGAGCTCTAGGTTCTGCGTCTaGGATGCGTCTGTGGATGGGGCTTCCTCAAAGGTCAACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPDSEARKSSRFCV*DASVDGASSKVNSE Trigger: CTCAGAGTTGACCTTTGAGGAAGCCCCATCCACAGACGCATCCCAGACGCAGAACCTAGAGCTCTTTCTAGCCTCGGAGTCCGGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | ATCTTCTCTAGAGTTAGCTGCACGCTGACCTACACAGACGACGCCTaGGTCCTCCTCATGAGAGCAGATATGGGCCTTCCAGCCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IFSRVSCTLTYTDDA*VLLMRADMGLPAPV Trigger: CACCGGGGCTGGAAGGCCCATATCTGCTCTCATGAGGAGGACGCAGGCGTCGTCTGTGTAGGTCAGCGTGCAGCTAACTCTAGAGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | CACGGAGGTAGACAGAAGCCTGTGTGCTGTGCTGTTGCTGTCCACTaGAGGAACTGTAGGCTGCACAGCACCGAGAGGCATGCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: HGGRQKPVCCAVAVH*RNCRLHSTERHAIT Trigger: TGTGATGGCATGCCTCTCGGTGCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGCACACAGGCTTCTGTCTACCTCCGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | TCTCACCCGATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTTGTGGTaGCCTCAGAGGTCACTTCTTGGGGACCTTGAGTGGACTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHPMAPKRSEGFPLW*PQRSLLGDLEWTVT Trigger: TGTCACAGTCCACTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGGGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | TGTTCTCACCCGATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTTGTaGTGGCCTCAGAGGTCACTTCTTGGGGACCTTGAGTGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSHPMAPKRSEGFPL*WPQRSLLGDLEWTV Trigger: CACAGTCCACTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGGGTGAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | GGCCCTGGAATGTTTGGTGGTTGGCATCCCAGGGGGCTGAGTGGTTaGTCTCCTTGCATTTTTAGTCACCCACTTCTTGGTACTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGMFGGWHPRGLSG*SPCIFSHPLLGTLG Trigger: CCCAAGAGTACCAAGAAGTGGGTGACTAAAAATGCAAGGAGACCAACCACTCAGCCCCCTGGGATGCCAACCACCAAACATTCCAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 90 bp | GGCTGTAAACGGCTGTGTGGGGGTCCTGGTGTTCATGGGGAGGTCTaGGGAGTCAGAACTTTCTGGGATTATTTCAGGTGCTGGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCKRLCGGPGVHGEV*GVRTFWDYFRCWCC Trigger: ACAACACCAGCACCTGAAATAATCCCAGAAAGTTCTGACTCCTCAGACCTCCCCATGAACACCAGGACCCCCACACAGCCGTTTACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 90 bp | ATGTTTGGTGGTTGGCATCCCAGGGGGCTGAGTGGTTGGTCTCCTTaGATTTTTAGTCACCCACTTCTTGGTACTCTTGGGAGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: MFGGWHPRGLSGWSP*IFSHPLLGTLGSFP Trigger: GGGAAAGCTCCCAAGAGTACCAAGAAGTGGGTGACTAAAAATGCAAGGAGACCAACCACTCAGCCCCCTGGGATGCCAACCACCAAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 90 bp | TCAGCCTTACAGTGGTATGTGAGGTCTGCCTGTGGGGAGCCTCAGTaGTCAGTCTCTTTGGTAACTCAGAGGTACGTGCTGTTGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SALQWYVRSACGEPQ*SVSLVTQRYVLLDV Trigger: TACATCCAACAGCACGTACCTCTGAGTTACCAAAGAGACTGACCACTGAGGCTCCCCACAGGCAGACCTCACATACCACTGTAAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGCCCAGTGCCAGGACTaGGCGCTCCTGCCGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFAQCQD*ALLPVL Trigger: CAGGACCGGCAGGAGCGCCAAGTCCTGGCACTGGGC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGATGCTGCGGGGTCTGGTaGCCGAGGCCTCCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRCCGVW*PRPPTA Trigger: GGCTGTGGGAGGCCTCGGCAACCAGACCCCGCAGCA...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCTTGGATGTAGGGAGGTaGGGGTGCCTGGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFLDVGR*GCLGPW Trigger: CCAGGGCCCCAGGCACCCCAACCTCCCTACATCCAA...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCGGCCAGCACACCTGTaGGGCCCATCAGCCAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVRPAHL*GPSARR Trigger: TCGTCTGGCTGATGGGCCCAACAGGTGTGCTGGCCG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGGCCATTCTGGGAGCTaGCTGCTGGTTGGGGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFGHSGS*LLVGER Trigger: ACGCTCCCCAACCAGCAGCAAGCTCCCAGAATGGCC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGGGGCCCTGGAATGTTaGGTGGTTGGCATCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVGALEC*VVGIPG Trigger: CCCTGGGATGCCAACCACCAAACATTCCAGGGCCCC...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAACCTGCACGGGCCCTaGGAGCTGGAAAGGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRNLHGP*ELERGG Trigger: GCCACCCCTTTCCAGCTCCAAGGGCCCGTGCAGGTT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCAGGGGAGGTGGGTGTaGGGCTGCCTGAAAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVQGRWV*GCLKAL Trigger: CAGAGCTTTCAGGCAGCCCAACACCCACCTCCCCTG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGATCCCCACCAGCATaGCAAGGAGGCAGGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGSPPA*QGGRPS Trigger: GCTTGGCCTGCCTCCTTGCAATGCTGGTGGGGATCC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGGACTTGGTCTGCTaGGGTGGCCGGGGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRVDLVC*GGRGFF Trigger: GAAGAACCCCCGGCCACCCAAGCAGACCAAGTCCAC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGGTGGGGAGCTCCATTaGTCAGTACAGGGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRGGELH*SVQGLG Trigger: CCCGAGCCCCTGTACTGACAAATGGAGCTCCCCACC...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTCTTCGTGGTCACAGTaGTGCTTCCCCCATGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVSSWSQ*CFPHAP Trigger: GGGGGCATGGGGGAAGCACAACTGTGACCACGAAGA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGTATTGGTGGGAGGTaGAGGACTTGTGGCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFSIGGR*RTCGGV Trigger: CACCCCGCCACAAGTCCTCAACCTCCCACCAATACT...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCGTAGTGGGTCCAAGTTaGAGGCTGGAGAGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFVVGPS*RLERDW Trigger: CCAGTCCCTCTCCAGCCTCAAACTTGGACCCACTAC...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCTCATTGTGGGCGCAATaGTGTTTCCCCCAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFSLWAQ*CFPQEA Trigger: TGCTTCCTGGGGGAAACACAATTGCGCCCACAATGA...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACTCAGAGGTCACTTCTaGGGGACCTTGAGTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRLRGHF*GTLSGL Trigger: CAGTCCACTCAAGGTCCCCAAGAAGTGACCTCTGAG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTGGCTTCTGGGTGGTTaGAAGGCATCTGTGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVWLLGG*KASVGS Trigger: ACTACCCACAGATGCCTTCAAACCACCCAGAAGCCA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGACACTTCTTGGTACTCTaGGGAGCTTTCCCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRHFLVL*GAFPGT Trigger: GGTTCCAGGGAAAGCTCCCAAGAGTACCAAGAAGTG...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGCAGTGGTCAGTCTCTTaGGTAACTCAGAGGTACGTG | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVQWSVS*VTQRYV Trigger: CACGTACCTCTGAGTTACCAAAGAGACTGACCACTG...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAGTGTTTCAGGTGCTGGTGTaGTATCAGGTCCTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YIRWLLFKSILSTVNFRVFQVLV*YQVLES Trigger: TGACTCCAGGACCTGATACAACACCAGCACCTGAAA...CACTCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | TTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCAGAAGAAGTTGTGTTGAGTaGAGGGATGCTGGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYIRWLLFKSILSTVNFRRSCVE*RDAGGV Trigger: CACCCCACCAGCATCCCTCAACTCAACACAACTTCT...TCTGAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS-3UTR CAA 90 bp | CGATTGTACATACGTTGGCTTTTGTTTAAGAGTATCTTAAGCACCGTGAATTTCTTAGTCACCCACTTCTaGGTACTCTTGGGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLYIRWLLFKSILSTVNFLVTHF*VLLGAF Trigger: GAAAGCTCCCAAGAGTACCAAGAAGTGGGTGACTAA...GAAATTCACGGTGCTTAAGATACTCTTAAACAAAAGCCAACGTATGTACAATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | GGGCAGCGGCCGGCGCTCAGGTGTTGGCTTCCTTGGTaGACCTGCACGGGCCCTTGGAGCTGGAAAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQRPALRCWLPW*TCTGPWSWKGV Trigger: CACCCCTTTCCAGCTCCAAGGGCCCGTGCAGGTTCACCAAGGAAGCCAACACCTGAGCGCCGGCCGCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | GCGTATCCTGGGTGCAGGACCGGTGCAGACCAGCCCTaGATCCTCGGTGTGGTCACAGTTGCTCCGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AYPGCRTGADQP*ILGVVTVAPAP Trigger: TGGGGCCGGAGCAACTGTGACCACACCGAGGATGCAGGGCTGGTCTGCACCGGTCCTGCACCCAGGATACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | AGGCCCAGTGCCAGGACTTGGCGCTCCTGCCGGTCCTaGTCCAGGACCCAGGTCAGTCTCTGCAGCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSARTWRSCRS*SRTQVSLCSWS Trigger: TGACCAGCTGCAGAGACTGACCTGGGTCCTGGAGCAGGACCGGCAGGAGCGCCAAGTCCTGGCACTGGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | AACTGGGCTAGGCCCAGTGCCAGGACTTGGCGCTCCTaGCGGTCCTGCTCCAGGACCCAGGTCAGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NWARPSARTWRS*RSCSRTQVSLC Trigger: GCAGAGACTGACCTGGGTCCTGGAGCAGGACCGGCAGGAGCGCCAAGTCCTGGCACTGGGCCTAGCCCAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CAA 72 bp | AGGTGGGCAGCGGCCGGCGCTCAGGTGTTGGCTTCCTaGGTGAACCTGCACGGGCCCTTGGAGCTGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RWAAAGAQVLAS*VNLHGPLELER Trigger: CCTTTCCAGCTCCAAGGGCCCGTGCAGGTTCACCAAGGAAGCCAACACCTGAGCGCCGGCCGCTGCCCACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | TCCTGCCGGTCCTGCTCCAGGACCCAGGTCAGTCTCTaGAGCTGGTCACCCACCTCCCTCACAGCACCTACC | + |
|
Preference number: 6 (lower is better) Translates to: SCRSCSRTQVSL*SWSPTSLTAPT Trigger: GGTAGGTGCTGTGAGGGAGGTGGGTGACCAGCTGCAGAGACTGACCTGGGTCCTGGAGCAGGACCGGCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CCA 72 bp | CCGTGGGGACCTGAGACCAGTCGCAGCCGCTCTTGGTaGGGAGCTCCATTTGTCAGTACAGGGGCTCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWGPETSRSRSW*GAPFVSTGARV Trigger: CACCCGAGCCCCTGTACTGACAAATGGAGCTCCCCACCAAGAGCGGCTGCGACTGGTCTCAGGTCCCCACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CCA 72 bp | CAGCACAGCCGTGGGGACCATCAGCAAGGCGTATCCTaGGTGCAGGACCGGTGCAGACCAGCCCTGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QHSRGDHQQGVS*VQDRCRPALHP Trigger: AGGATGCAGGGCTGGTCTGCACCGGTCCTGCACCCAGGATACGCCTTGCTGATGGTCCCCACGGCTGTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CAA 90 bp | CCCCAGAGTCCAGCATGCCACACCTCTAGCCGGCCAGCACACCTGTaGGGCCCATCAGCCAGACGAACCCGGAAGGGACCTGATGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PQSPACHTSSRPAHL*GPSARRTRKGPDGT Trigger: TGTGCCATCAGGTCCCTTCCGGGTTCGTCTGGCTGATGGGCCCAACAGGTGTGCTGGCCGGCTAGAGGTGTGGCATGCTGGACTCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | ACCCAGCCCAGGGAGCCAGCTCCAACTGAAAGGGTCTaGGATGGTATCCAGGCCGGGGGTCCCAGTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TQPREPAPTERV*DGIQAGGPSAG Trigger: ACCTGCACTGGGACCCCCGGCCTGGATACCATCTCAGACCCTTTCAGTTGGAGCTGGCTCCCTGGGCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | GTTGGGCCCATCAGCCAGACGAACCCGGAAGGGACCTaGTGGCACAGGGACTCCAGCAGTTGGGGTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VGPISQTNPEGT*WHRDSSSWGGS Trigger: GCTACCACCCCAACTGCTGGAGTCCCTGTGCCATCAGGTCCCTTCCGGGTTCGTCTGGCTGATGGGCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | CCTGATCTCTACCCAGCCCAGGGAGCCAGCTCCAACTaGAAGGGTCTGAGATGGTATCCAGGCCGGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PDLYPAQGASSN*KGLRWYPGRGS Trigger: GGACCCCCGGCCTGGATACCATCTCAGACCCTTTCAGTTGGAGCTGGCTCCCTGGGCTGGGTAGAGATCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | ACCAGATGGGCCCAGTGCCAGGGCCATAGTGAGTTTTaGCTACTCGGGGCCGGACCTTTCCGCAACCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TRWAQCQGHSEF*LLGAGPFRNPA Trigger: AGCTGGGTTGCGGAAAGGTCCGGCCCCGAGTAGGCAAAACTCACTATGGCCCTGGCACTGGGCCCATCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | GAGCTCCATTTGTCAGTACAGGGGCTCGGGTGGACTTaGTCTGCTTGGGTGGCCGGGGGTTCTTCTTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELHLSVQGLGWT*SAWVAGGSSSG Trigger: CCCGGAAGAAGAACCCCCGGCCACCCAAGCAGACCAAGTCCACCCGAGCCCCTGTACTGACAAATGGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | GGTGAACCTGCACGGGCCCTTGGAGCTGGAAAGGGGTaGCCGGGACTCTTGCTGGTGCTAGTGGTAACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GEPARALGAGKG*PGLLLVLVVTV Trigger: CACAGTTACCACTAGCACCAGCAAGAGTCCCGGCCACCCCTTTCCAGCTCCAAGGGCCCGTGCAGGTTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | GGAGCTCCATTTGTCAGTACAGGGGCTCGGGTGGACTaGGTCTGCTTGGGTGGCCGGGGGTTCTTCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPFVSTGARVD*VCLGGRGFFFR Trigger: CCGGAAGAAGAACCCCCGGCCACCCAAGCAGACCAAGTCCACCCGAGCCCCTGTACTGACAAATGGAGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | CGGGCCCTTGGAGCTGGAAAGGGGTGGCCGGGACTCTaGCTGGTGCTAGTGGTAACTGTGGATCCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RALGAGKGWPGL*LVLVVTVDPGL Trigger: CAAGCCTGGATCCACAGTTACCACTAGCACCAGCAAGAGTCCCGGCCACCCCTTTCCAGCTCCAAGGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 72 bp | CCAGCTGACCCTCATTGCCCCGACAGTTCAGTTCACTaGGCCATACAGGCCCAGTGCCCTCCCCGAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PADPHCPDSSVH*AIQAQCPPRRR Trigger: CCTTCTTCGGGGAGGGCACTGGGCCTGTATGGCTCAGTGAACTGAACTGTCGGGGCAATGAGGGTCAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | AGCCTCTTTACAGTCTCACTCAGCTGCCCCAACCCCTaGGCAGCCTCTACCAACTGGGCTAGGCCCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLFTVSLSCPNP*AASTNWARPSA Trigger: GGCACTGGGCCTAGCCCAGTTGGTAGAGGCTGCTCAGGGGTTGGGGCAGCTGAGTGAGACTGTAAAGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 72 bp | GCTGTGCTGTTGCTGTCCACTGCAGGAACTGTAGGCTaGACAGCACCGAGAGGCATGCCATCACACACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVLLLSTAGTVG*TAPRGMPSHTA Trigger: GGCCGTGTGTGATGGCATGCCTCTCGGTGCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | GGGCCGGACTCCGAGGCTAGAAAGAGCTCTAGGTTCTaGGTCTGGGATGCGTCTGTGGATGGGGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPDSEARKSSRF*VWDASVDGASS Trigger: TGAGGAAGCCCCATCCACAGACGCATCCCAGACGCAGAACCTAGAGCTCTTTCTAGCCTCGGAGTCCGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | AGACCAGTCGCAGCCGCTCTTGGTGGGGAGCTCCATTaGTCAGTACAGGGGCTCGGGTGGACTTGGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPVAAALGGELH*SVQGLGWTWSA Trigger: AGCAGACCAAGTCCACCCGAGCCCCTGTACTGACAAATGGAGCTCCCCACCAAGAGCGGCTGCGACTGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 72 bp | GAGTCTGGGATGAGTTGTGGCCAGGAGCCAGAGGTCTaGCGTGAGCCAGAAGGCTCTGGTGAAGAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ESGMSCGQEPEV*REPEGSGEEEE Trigger: TTCCTCCTCTTCACCAGAGCCTTCTGGCTCACGGCAGACCTCTGGCTCCTGGCCACAACTCATCCCAGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CCA 72 bp | AGGAAGGGTGAGTATTGGTGGGAGGTTGAGGACTTGTaGCGGGGTGAGGGCTCCTGGGTTGCTGAGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKGEYWWEVEDL*RGEGSWVAEGL Trigger: CAAACCCTCAGCAACCCAGGAGCCCTCACCCCGCCACAAGTCCTCAACCTCCCACCAATACTCACCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | AGATGGTTTGGGGGAGCTAGAGGTCCCCTCCTGCTTTaGGTCTGGGATGAGTTGTGGCCAGGAGCCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RWFGGARGPLLL*VWDELWPGARG Trigger: ACCTCTGGCTCCTGGCCACAACTCATCCCAGACTCAAAGCAGGAGGGGACCTCTAGCTCCCCCAAACCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | CAGAGGTTAGCCCTTCAGGGGAGGTGGGTGTTGGGCTaGCTGAAAGCTCTGGGGAACGTGTTGGAAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QRLALQGRWVLG*LKALGNVLEAN Trigger: GTTTGCTTCCAACACGTTCCCCAGAGCTTTCAGGCAGCCCAACACCCACCTCCCCTGAAGGGCTAACCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CAA 72 bp | CCCACGGAGGTAGACAGAAGCCTGTGTGCTGTGCTGTaGCTGTCCACTGCAGGAACTGTAGGCTGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTEVDRSLCAVL*LSTAGTVGCTA Trigger: TGCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGCACACAGGCTTCTGTCTACCTCCGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CAA 90 bp | GAGCCTCAGTGGTCAGTCTCTTTGGTAACTCAGAGGTACGTGCTGTaGGATGTAGGGAGGTTGGGGTGCCTGGGGCCCTGGAATGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPQWSVSLVTQRYVL*DVGRLGCLGPWNVW Trigger: CCAAACATTCCAGGGCCCCAGGCACCCCAACCTCCCTACATCCAACAGCACGTACCTCTGAGTTACCAAAGAGACTGACCACTGAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CAA 90 bp | CGGTGTTCTCACCCGATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTaGTGGTGGCCTCAGAGGTCACTTCTTGGGGACCTTGAGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RCSHPMAPKRSEGFP*WWPQRSLLGDLEWT Trigger: AGTCCACTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGGGTGAGAACACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | CCTTCGGTGTTCTCACCCGATGGCTCCAAAGAGGTCTaGGGGTTTTCCGTTGTGGTGGCCTCAGAGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSVFSPDGSKEV*GFSVVVASEVT Trigger: AGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGGGTGAGAACACCGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS TCA 72 bp | GACTCCAGCAGTTGGGGTGGTAGCTGGATCTTGGGATaGTTCCAGAGAGCCTTCGGTGTTCTCACCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: DSSSWGGSWILG*FQRAFGVLTRW Trigger: CCATCGGGTGAGAACACCGAAGGCTCTCTGGAATCATCCCAAGATCCAGCTACCACCCCAACTGCTGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | AGAGTTAGCTGCACGCTGACCTACACAGACGACGCCTaGGTCCTCCTCATGAGAGCAGATATGGGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSCTLTYTDDA*VLLMRADMGLP Trigger: TGGAAGGCCCATATCTGCTCTCATGAGGAGGACGCAGGCGTCGTCTGTGTAGGTCAGCGTGCAGCTAACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | AGACAGAAGCCTGTGTGCTGTGCTGTTGCTGTCCACTaGAGGAACTGTAGGCTGCACAGCACCGAGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RQKPVCCAVAVH*RNCRLHSTERH Trigger: ATGCCTCTCGGTGCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGCACACAGGCTTCTGTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | ACCCTAGGGGTCAGCCTTACAGTGGTATGTGAGGTCTaGCTGTGGGGAGCCTCAGTGGTCAGTCTCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLGVSLTVVCEV*LWGASVVSLFG Trigger: ACCAAAGAGACTGACCACTGAGGCTCCCCACAGGCAGACCTCACATACCACTGTAAGGCTGACCCCTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS GCA 72 bp | AGTAGAGATGGTTTGGGGGAGCTAGAGGTCCCCTCCTaGTTTGAGTCTGGGATGAGTTGTGGCCAGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRDGLGELEVPS*FESGMSCGQEP Trigger: TGGCTCCTGGCCACAACTCATCCCAGACTCAAAGCAGGAGGGGACCTCTAGCTCCCCCAAACCATCTCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CCA 72 bp | CCGATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTTGTaGTGGCCTCAGAGGTCACTTCTTGGGGACCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PMAPKRSEGFPL*WPQRSLLGDLE Trigger: CTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
||
| CDS CCA 72 bp | GACTCCGAGGCTAGAAAGAGCTCTAGGTTCTGCGTCTaGGATGCGTCTGTGGATGGGGCTTCCTCAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DSEARKSSRFCV*DASVDGASSKV Trigger: GACCTTTGAGGAAGCCCCATCCACAGACGCATCCCAGACGCAGAACCTAGAGCTCTTTCTAGCCTCGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | GTGCAGGTAACCCCGACATCCTCATTGTGGGCGCAATaGTGTTTCCCCCAGGAAGCAGCAGGGCATTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: VQVTPTSSLWAQ*CFPQEAAGHSD Trigger: GTCAGAATGCCCTGCTGCTTCCTGGGGGAAACACAATTGCGCCCACAATGAGGATGTCGGGGTTACCTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | CACCCGATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTaGTGGTGGCCTCAGAGGTCACTTCTTGGGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: HPMAPKRSEGFP*WWPQRSLLGDL Trigger: AAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCATCGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 72 bp | GCCCTGGAATGTTTGGTGGTTGGCATCCCAGGGGGCTaGGTGGTTGGTCTCCTTGCATTTTTAGTCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: ALECLVVGIPGG*VVGLLAFLVTH Trigger: GTGGGTGACTAAAAATGCAAGGAGACCAACCACTCAGCCCCCTGGGATGCCAACCACCAAACATTCCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 72 bp | CGGCTGTGTGGGGGTCCTGGTGTTCATGGGGAGGTCTaGGGAGTCAGAACTTTCTGGGATTATTTCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RLCGGPGVHGEV*GVRTFWDYFRC Trigger: GCACCTGAAATAATCCCAGAAAGTTCTGACTCCTCAGACCTCCCCATGAACACCAGGACCCCCACACAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | CAGTGGTATGTGAGGTCTGCCTGTGGGGAGCCTCAGTaGTCAGTCTCTTTGGTAACTCAGAGGTACGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QWYVRSACGEPQ*SVSLVTQRYVL Trigger: CAGCACGTACCTCTGAGTTACCAAAGAGACTGACCACTGAGGCTCCCCACAGGCAGACCTCACATACCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | GGGGTCAGCCTTACAGTGGTATGTGAGGTCTGCCTGTaGGGAGCCTCAGTGGTCAGTCTCTTTGGTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: GVSLTVVCEVCL*GASVVSLFGNS Trigger: TGAGTTACCAAAGAGACTGACCACTGAGGCTCCCCACAGGCAGACCTCACATACCACTGTAAGGCTGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | ATGGCTCCAAAGAGGTCTGAGGGTTTTCCGTTGTGGTaGCCTCAGAGGTCACTTCTTGGGGACCTTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: MAPKRSEGFPLW*PQRSLLGDLEW Trigger: CCACTCAAGGTCCCCAAGAAGTGACCTCTGAGGCCACCACAACGGAAAACCCTCAGACCTCTTTGGAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | AGGTCTGCCTGTGGGGAGCCTCAGTGGTCAGTCTCTTaGGTAACTCAGAGGTACGTGCTGTTGGATGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSACGEPQWSVS*VTQRYVLLDVG Trigger: CCCTACATCCAACAGCACGTACCTCTGAGTTACCAAAGAGACTGACCACTGAGGCTCCCCACAGGCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS GCA 72 bp | ACCTCCCTGGTCATCCGTGTCTGGAAGGTTCTGTGTTaGTGGAGAGGGGACTTCAGTGTTTGTAGTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TSLVIRVWKVLC*WRGDFSVCSGS Trigger: GCTACCACTACAAACACTGAAGTCCCCTCTCCAGCAACACAGAACCTTCCAGACACGGATGACCAGGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | CCAGGAAGACTCATAACCTCCCTGGTCATCCGTGTCTaGAAGGTTCTGTGTTGCTGGAGAGGGGACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PGRLITSLVIRV*KVLCCWRGDFS Trigger: ACTGAAGTCCCCTCTCCAGCAACACAGAACCTTCCAGACACGGATGACCAGGGAGGTTATGAGTCTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS TCA 72 bp | AAGGATAATCGTCATCACCCGTGTAGCCAGTGCAGGTaGGCACCACGTCTTCTTCGTGGTCACAGTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KDNRHHPCSQCR*APRLLRGHSCA Trigger: AGCACAACTGTGACCACGAAGAAGACGTGGTGCTCACCTGCACTGGCTACACGGGTGATGACGATTATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | ATGTTTGGTGGTTGGCATCCCAGGGGGCTGAGTGGTTaGTCTCCTTGCATTTTTAGTCACCCACTTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: MFGGWHPRGLSG*SPCIFSHPLLG Trigger: ACCAAGAAGTGGGTGACTAAAAATGCAAGGAGACCAACCACTCAGCCCCCTGGGATGCCAACCACCAAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CCA 72 bp | GAAAGAGCTCTAGGTTCTGCGTCTGGGATGCGTCTGTaGATGGGGCTTCCTCAAAGGTCAACTCTGAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ERALGSASGMRL*MGLPQRSTLSL Trigger: TAAACTCAGAGTTGACCTTTGAGGAAGCCCCATCCACAGACGCATCCCAGACGCAGAACCTAGAGCTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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| CDS CAA 72 bp | CTCCTTGCATTTTTAGTCACCCACTTCTTGGTACTCTaGGGAGCTTTCCCTGGAACCTTTGTGGGTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLAFLVTHFLVL*GAFPGTFVGFC Trigger: ACAGAAACCCACAAAGGTTCCAGGGAAAGCTCCCAAGAGTACCAAGAAGTGGGTGACTAAAAATGCAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057612.9 |
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