Pregenerated sensors for SSC4D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029699Ensembl transcript IDs: ENSMUST00000054895.4, ENSMUST00000111150.2, ENSMUST00000111152.8, ENSMUST00000111153.8, ENSMUST00000153823.8, ENSMUST00000154181.2, ENSMUST00000154696.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCACTGCATCTCTCCCATaGACGGGGAGAAAGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: APAAPLFSGAPSESRSSPTASLP*TGRKGY Trigger: GTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGT...GGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCCATAGGAAGGCATCCTaGGAAAGGACAGGCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: APAAPLFSGAPSESRSSPHRKAS*ERTGSS Trigger: GGAACTGCCTGTCCTTTCCCAGGATGCCTTCCTATG...GGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR CAA 90 bp | GTGGAAATCAGAGAAGCTGCAGGAAGGGCTCCTCTGGTCCCTGTTTaGGCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: VEIREAAGRAPLVPV*APAAPLFSGAPSES Trigger: GGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGCCAAAACAGGGACCAGAGGAGCCCTTCCTGCAGCTTCTCTGATTTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACCCAGCAGGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCCCTCATGGATGTGGGTaGAGAAGGGAAGGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PHPAGKVMAWFFCSPLPVPHGCG*RREGLG Trigger: CCCCAATCCTTCCCTTCTGCACCCACATCCATGAGG...GACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCCTGCTGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCCAGCAGGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCCATAGGAAGGCATCCTaGGAAAGGACAGGCAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PHPAGKVMAWFFCSPLPVHRKAS*ERTGSS Trigger: GGAACTGCCTGTCCTTTCCCAGGATGCCTTCCTATG...GACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCCTGCTGGGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCAAGCCTCATGGATGTaGGTGCAGAAGGGAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: WPLQPPCSAEHHLSPGPHQASWM*VQKGRI Trigger: AATCCTTCCCTTCTGCACCCACATCCATGAGGCTTG...GTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATAGACTCGGGCAGGTACTaGATCTCTCCCATGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: TAQASWMWVQKGRIGGTIDSGRY*ISPMHG Trigger: CCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTC...TATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCTCCCCCAAAGAGAAGTaGGTTATTCTCTCACATTTT | + |
|
Preference number: 2 (lower is better) Translates to: APAAPLFSGAPSESRSSPSPKEK*VILSHF Trigger: AAAATGTGAGAGAATAACCCACTTCTCTTTGGGGGA...GGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGAGATAATGCTTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCGGGAAGGTGATGGCCTaGTTCTTCTGCAGTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGDNALLTWHLRTVAMGLGKVMA*FFCSPL Trigger: CAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCC...GAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAAGCATTATCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACCAAGAGAGGTCACGGTAAGGGTTTGAAGGCATTTACAGACAGCCCAAGCACTGCATCTCTCCCATaGACGGGGAGAAAGGGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: ETKRGHGKGLKAFTDSPSTASLP*TGRKGY Trigger: GTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGT...GCTTGGGCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACCTCTCTTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | GTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATTCCTTTGATATGGTATaGAGTACAGAGCCATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLHLSHARGERGTRNPSYSFDMV*STEPSG Trigger: CCCAGATGGCTCTGTACTCCATACCATATCAAAGGA...ATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCCAGGGTTCTTTGTTCATAGGAAGGCATCCTaGGAAAGGACAGGCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FIDLAPKDSGYGPPGFFVHRKAS*ERTGSS Trigger: GGAACTGCCTGTCCTTTCCCAGGATGCCTTCCTATG...AACAAAGAACCCTGGAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCCAGGGTTCTTTGTTTCCTTTGATATGGTATaGAGTACAGAGCCATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FIDLAPKDSGYGPPGFFVSFDMV*STEPSG Trigger: CCCAGATGGCTCTGTACTCCATACCATATCAAAGGA...AACAAAGAACCCTGGAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCTGCAGAAGGGAAGGATaGGGGGTACTATATGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: APAAPLFSGAPSESRSSPCRREG*GVLYEF Trigger: GAACTCATATAGTACCCCCAATCCTTCCCTTCTGCA...GGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGGTCACGGTAAGGGTTaGAAGGCATTTACAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLQPPCSAEHHLSPGPHPGHGKG*KAFTDS Trigger: GCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACC...TGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGCAGGTCACGGTAAGGGTTaGAAGGCATTTACAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQPPCSAEHHLSPGPHPAGHGKG*KAFTDS Trigger: GCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACC...TGCTGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR GCA 72 bp | AGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATaGACGGGGAGAAAGGGGTACCAGGAACCCGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SKRTRAGTASLP*TGRKGYQEPEL Trigger: TAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR GCA 72 bp | CCTCACCCAGCAGGGAAGGTGATGGCCTGGTTCTTCTaGAGTCCCCTGCCAGTCTATAGAAAAGAGCACCCC | + |
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Preference number: 3 (lower is better) Translates to: PHPAGKVMAWFF*SPLPVYRKEHP Trigger: GGGGTGCTCTTTTCTATAGACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCCTGCTGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR CCA 72 bp | AGTCCAGGTCCTCACCCAGCAGGGAAGGTGATGGCCTaGTTCTTCTGCAGTCCCCTGCCAGTCTATAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPGPHPAGKVMA*FFCSPLPVYRK Trigger: TTTTCTATAGACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCCTGCTGGGTGAGGACCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR CCA 72 bp | CCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTaGGGGTACTATATGAGTTCCCCCAAAGAGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSLMDVGAEGKD*GYYMSSPKEKW Trigger: CCACTTCTCTTTGGGGGAACTCATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR GCA 72 bp | GGCATTTACAGACAGCCCAAGCCTCATGGATGTGGGTaGAGAAGGGAAGGATTGGGGGTACTATATGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: GIYRQPKPHGCG*RREGLGVLYEF Trigger: GAACTCATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTGTAAATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CAA 90 bp | CAGACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTCTCACATTTTCTGATTaGGCTGAGCAAAACATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTAQASWMWVQKGRIGGTLTFSD*AEQNIA Trigger: AGCAATGTTTTGCTCAGCCAAATCAGAAAATGTGAG...AGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR TCA 72 bp | TTTAGCAGGAGACCAAGAGAGGTCACGGTAAGGGTTTaGAGGCATTTACAGACAGCCCAAGCCTCATGGATG | + |
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Preference number: 3 (lower is better) Translates to: FSRRPREVTVRV*RHLQTAQASWM Trigger: CATCCATGAGGCTTGGGCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACCTCTCTTGGTCTCCTGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR TCA 72 bp | ATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATaGGTTCCCCCAAAGAGAAGTGGGTTATTCTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: MWVQKGRIGGTI*VPPKRSGLFSH Trigger: GTGAGAGAATAACCCACTTCTCTTTGGGGGAACTCATATAGTACCCCCAATCCTTCCCTTCTGCACCCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR-3UTR CAA 90 bp | GAGACCAAGAGAGGTCACGGTAAGGGTTTGAAGGCATTTACAGACAGCCCAAGCCTCACATTTTCTGATTaGGCTGAGCAAAACATTGCT | + |
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Preference number: 3 (lower is better) Translates to: ETKRGHGKGLKAFTDSPSLTFSD*AEQNIA Trigger: AGCAATGTTTTGCTCAGCCAAATCAGAAAATGTGAG...GCTTGGGCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACCTCTCTTGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACGAAAGGGCAGCGGAGTaGGCTGGAGGGCACTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WPLQPPCSAEHHLSPGPHERAAE*AGGHWP Trigger: TGGCCAGTGCCCTCCAGCCCACTCCGCTGCCCTTTC...GTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCTGTCCCCAGCCCAGATaGAAGCAGTCGCTGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: APAAPLFSGAPSESRSSPCPQPR*KQSLRR Trigger: CCGCCTCAGCGACTGCTTCCATCTGGGCTGGGGACA...GGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | CTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGCACATCGTCGCACACGGTaGCCCAACCCCCGGCGTACA | + |
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Preference number: 4 (lower is better) Translates to: LQPPCSAEHHLSPGPHPAHRRTR*PNPRRT Trigger: TGTACGCCGGGGGTTGGGGCACCGTGTGCGACGATG...TGCTGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTGGGGCAGCGGAGTGGGCTaGAGGGCACTGGCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ARGERGTRNPSYHRKASWGSGVG*RALASG Trigger: CCCACTGGCCAGTGCCCTCCAGCCCACTCCGCTGCC...CCAGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | GACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAGGACACCCCAGCCCCTaGTGCCACACTCGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DSGRYCISPMHGEKGVPGGHPSP*CHTRSE Trigger: CTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCC...TCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCACCAGCCTGCTGGACTTaGAGTCCCAGTTCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLQPPCSAEHHLSPGPHPPACWT*SPSSSG Trigger: CCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGG...TGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CCTCACCCAGCAGGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCGACGGCACAGGACAATaGCTGCCCGTAGGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PHPAGKVMAWFFCSPLPVDGTGQ*LPVGPR Trigger: CCTGGGACCTACGGGCAGCCATTGTCCTGTGCCGTC...GACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCCTGCTGGGTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGCAGACGGCACAGGACAATaGCTGCCCGTAGGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQPPCSAEHHLSPGPHPADGTGQ*LPVGPR Trigger: CCTGGGACCTACGGGCAGCCATTGTCCTGTGCCGTC...TGCTGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | CGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCTGGCCACATCCCAGCTaGCGGCACAGGACAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RAGTASLPCTGRKGYQEPWPHPS*RHRTMA Trigger: AGCCATTGTCCTGTGCCGTCAGCTGGGATGTGGCCA...GGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | CGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCCAGGCTTCCATCCCCTaGTCCATCCATCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RAGTASLPCTGRKGYQEPQASIP*SIHQAG Trigger: CCCAGCCTGATGGATGGAGCAGGGGATGGAAGCCTG...GGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATCCCCAGCCTAGGCTCTaGCAGGCTGCCAGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QPKPHGCGCRREGLGVLYPQPRL*QAARRG Trigger: GCCCCGCCTGGCAGCCTGCCAGAGCCTAGGCTGGGG...ATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ATTGGGCCTTCCGCAGGTGATAACAGTCTCGGGACACACAGTAAGAGGACTCGGAATGACCAAGGCCCGTaGCGCCTAGCGCGGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: IGPSAGDNSLGTHSKRTRNDQGP*RLARAR Trigger: GCGGGCCCGCGCTAGGCGCCACGGGCCTTGGTCATT...CCGAGTCCTCTTACTGTGTGTCCCGAGACTGTTATCACCTGCGGAAGGCCCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | GGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCTATAGAAAAGAGATCTCCACTCGGCCTTaGCACGGGCTGGCGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKVMAWFFCSPLPVYRKEISTRP*HGLAPP Trigger: GGGCGGCGCCAGCCCGTGTCAAGGCCGAGTGGAGAT...CTCTTTTCTATAGACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | ATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTCCGTGGCACCGGCAATaGCAGGCCACAGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MHGEKGVPGTRAIIGRHPPWHRQ*QATAQL Trigger: CAGCTGGGCTGTGGCCTGGCATTGCCGGTGCCACGG...AGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | CACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGCACCCCAGCCCCTGCTaGCACACTCGCTCAGAGACG | + |
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Preference number: 4 (lower is better) Translates to: HSKRTRAGTASLPCTGRKHPSPC*HTRSET Trigger: CGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTG...CTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | TGGCCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACTCAGAACCAGCCTGCTaGACTTGGAGTCCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: WPLQPPCSAEHHLSPGPHSEPAC*TWSPSS Trigger: GGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGA...GTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGCAGAGGGCACTGGCCAGTaGGAACAGAAGGAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LQPPCSAEHHLSPGPHPAEGTGQ*EQKEEG Trigger: TCCTTCCTCCTTCTGTTCCCACTGGCCAGTGCCCTC...TGCTGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ACACACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAGAAAGGGCAGCGGAGTaGGCTGGAGGGCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: THSKRTRAGTASLPCTGRERAAE*AGGHWP Trigger: TGGCCAGTGCCCTCCAGCCCACTCCGCTGCCCTTTC...TCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | ATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTCATCGTCGCACACGGTaGCCCAACCCCCGGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MHGEKGVPGTRAIIGRHPHRRTR*PNPRRT Trigger: TGTACGCCGGGGGTTGGGGCACCGTGTGCGACGATG...AGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ACACACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGACTCTGGGCCGAGGACTaGGCATTCGGGTGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: THSKRTRAGTASLPCTGRLWAED*AFGWSQ Trigger: CTGAGACCACCCGAATGCCCAGTCCTCGGCCCAGAG...TCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | GGAACCCGAGCTATCATAGGAAGGCATCCTGGGAAAGGACAGGCAGTTCCTCATGATGGAAGCAGTCGCTaGGGCGGGCCTCAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRAIIGRHPGKGQAVPHDGSSR*GGPQYR Trigger: CCGGTACTGAGGCCCGCCTCAGCGACTGCTTCCATC...ATGAGGAACTGCCTGTCCTTTCCCAGGATGCCTTCCTATGATAGCTCGGGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | AGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGCTCAGAGACGCTTCCTaGCCGCGGCACTCCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: SKRTRAGTASLPCTGRKGLRDAS*PRHSTL Trigger: TAATGTGGAGTGCCGCGGGCAGGAAGCGTCTCTGAG...CCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTGGGAAACTCTGGGCCGAGGACTaGGCATTCGGGTGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEKGVPGTRAIIGRHPGKLWAED*AFGWSQ Trigger: CTGAGACCACCCGAATGCCCAGTCCTCGGCCCAGAG...TTTCCCAGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTGACGGCACAGGACAATaGCTGCCCGTAGGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MHGEKGVPGTRAIIGRHPDGTGQ*LPVGPR Trigger: CCTGGGACCTACGGGCAGCCATTGTCCTGTGCCGTC...AGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTGGGAGGGCACTGGCCAGTaGGAACAGAAGGAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARGERGTRNPSYHRKASWEGTGQ*EQKEEG Trigger: TCCTTCCTCCTTCTGTTCCCACTGGCCAGTGCCCTC...CCAGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | TTACAGACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTTGTCCCCAGCCCAGATaGAAGCAGTCGCTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTAQASWMWVQKGRIGGCPQPR*KQSLRR Trigger: CCGCCTCAGCGACTGCTTCCATCTGGGCTGGGGACA...ACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCATCTGGCCTCTCCCGGGGCTaGGAGAGCCTGGCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DRQFLIGSFDMVWSTEPSGLSRG*ESLATS Trigger: GGATGTGGCCAGGCTCTCGCAGCCCCGGGAGAGGCC...AGATGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | GGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGGGCCTCTCCCGGGGCTaGGAGAGCCTGGCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: GKDRQFLIGSFDMVWSTEGLSRG*ESLATS Trigger: GGATGTGGCCAGGCTCTCGCAGCCCCGGGAGAGGCC...CTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | GTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCTCAGAGACGCTTCCTaGCCGCGGCACTCCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: VLHLSHARGERGTRNPSYLRDAS*PRHSTL Trigger: TAATGTGGAGTGCCGCGGGCAGGAAGCGTCTCTGAG...ATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGCTGGCACAAGACACTaGCATCCTCGCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSKRTRAGTASLPCTGRKAGTRH*HPRCGH Trigger: GTGACCACAGCGAGGATGCCAGTGTCTTGTGCCAGC...CTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CCGCAGGTGATAACAGTCTCGGGACACACAGTAAGAGGACTCGGGCAGGTACTGGCTGGCACAAGACACTaGCATCCTCGCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQVITVSGHTVRGLGQVLAGTRH*HPRCGH Trigger: GTGACCACAGCGAGGATGCCAGTGTCTTGTGCCAGC...CAGTACCTGCCCGAGTCCTCTTACTGTGTGTCCCGAGACTGTTATCACCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTGGCAGCGGAGTGGGCTaGAGGGCACTGGCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDRQFLIGSFDMVWSGSGVG*RALASG Trigger: CCCACTGGCCAGTGCCCTCCAGCCCACTCCGCTGCC...ACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | ACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATGGCCACATCCCAGCTaGCGGCACAGGACAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAQASWMWVQKGRIGGTIWPHPS*RHRTMA Trigger: AGCCATTGTCCTGTGCCGTCAGCTGGGATGTGGCCA...TATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | CAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATTGGCCACATCCCAGCTaGCGGCACAGGACAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKPHGCGCRREGLGVLYWPHPS*RHRTMA Trigger: AGCCATTGTCCTGTGCCGTCAGCTGGGATGTGGCCA...ATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | GTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATGGCTGGGGGCCAATTTaGATCTCTGCTTCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLHLSHARGERGTRNPSYGWGPI*ISASLG Trigger: ACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCC...ATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCTATAGAAAAGAGCCAGCCTGCTGGACTTaGAGTCCCAGTTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVMAWFFCSPLPVYRKEPACWT*SPSSSG Trigger: CCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGG...CTCTTTTCTATAGACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | CAAAACATTGCTATGTTCACTGTATTGGGCCTTCCGCAGGTGATAACAGTCTCGAATGACCAAGGCCCGTaGCGCCTAGCGCGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QNIAMFTVLGLPQVITVSNDQGP*RLARAR Trigger: GCGGGCCCGCGCTAGGCGCCACGGGCCTTGGTCATT...CGAGACTGTTATCACCTGCGGAAGGCCCAATACAGTGAACATAGCAATGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGTCGCCACCTTCGCAGTaGACATTGTCCAGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LSHARGERGTRNPSYHRKSPPSQ*TLSSRI Trigger: TATCCTGCTGGACAATGTTCACTGCGAAGGTGGCGA...CTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | CACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGCCAATTTGCATCTCTaGTTCCTTGGGTGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSKRTRAGTASLPCTGRKANLHL*FLGCPA Trigger: GGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGC...CTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | CAAAACATTGCTATGTTCACTGTATTGGGCCTTCCGCAGGTGATAACAGTCTCGCCGTGGCACCGGCAATaGCAGGCCACAGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNIAMFTVLGLPQVITVSPWHRQ*QATAQL Trigger: CAGCTGGGCTGTGGCCTGGCATTGCCGGTGCCACGG...CGAGACTGTTATCACCTGCGGAAGGCCCAATACAGTGAACATAGCAATGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCCAGGGTTCTTTGTTCACCCCAGCCCCTGCTaGCACACTCGCTCAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: FIDLAPKDSGYGPPGFFVHPSPC*HTRSET Trigger: CGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTG...AACAAAGAACCCTGGAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCCAGGGTTCTTTGTTGGACACCCCAGCCCCTaGTGCCACACTCGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIDLAPKDSGYGPPGFFVGHPSP*CHTRSE Trigger: CTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCC...AACAAAGAACCCTGGAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | TTACAGACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACGGAGGCAGAGCTGTaGAAGTCGGAGGGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQTAQASWMWVQKGRIGGTEAEL*KSEGLE Trigger: TTCTAAGCCCTCCGACTTCCACAGCTCTGCCTCCGT...ACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | GGTAAGGGTTTGAAGGCATTTACAGACAGCCCAAGCCTCATGGATGTGGGTGCAAGTGTCCCTGGAAGGTaGGGCACCAACTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGLKAFTDSPSLMDVGASVPGR*GTNSCS Trigger: GCTACAGGAGTTGGTGCCTCACCTTCCAGGGACACT...TGCACCCACATCCATGAGGCTTGGGCTGTCTGTAAATGCCTTCAAACCCTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | ACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATAGTCTCAGAACCAGCCTaGTGGACTTGGAGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAQASWMWVQKGRIGGTIVSEPA*WTWSPS Trigger: ACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGAC...TATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | ACACACAGTAAGAGGACTCGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAGTTGGGGGCTGTGTGTaGAAGAATTCATCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: THSKRTRAGTASLPCTGRVGGCV*KNSSHR Trigger: CCTGTGTGATGAATTCTTGCACACACAGCCCCCAAC...TCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCGAGTCCTCTTACTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GGAACCCGAGCTATCATAGGAAGGCATCCTGGGAAAGGACAGGCAGTTCCTCATTCAGAACCAGCCTGCTaGACTTGGAGTCCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTRAIIGRHPGKGQAVPHSEPAC*TWSPSS Trigger: GGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGA...ATGAGGAACTGCCTGTCCTTTCCCAGGATGCCTTCCTATGATAGCTCGGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GGGGGAGATAATGCTTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCGACTGGGCATTCGGGTaGTCTCAGAACCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGDNALLTWHLRTVAMGLDWAFG*SQNQPA Trigger: AGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTC...GAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAAGCATTATCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCATCTCTCTGGGCCGAGGACTaGGCATTCGGGTGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRQFLIGSFDMVWSTEPSLWAED*AFGWSQ Trigger: CTGAGACCACCCGAATGCCCAGTCCTCGGCCCAGAG...AGATGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | ATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTGACGGCACAGGACAATaGCTGCCCGTAGGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDRQFLIGSFDMVWSDGTGQ*LPVGPR Trigger: CCTGGGACCTACGGGCAGCCATTGTCCTGTGCCGTC...ACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | AAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCATGGCCACATCCCAGCTaGCGGCACAGGACAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDRQFLIGSFDMVWSTEPWPHPS*RHRTMA Trigger: AGCCATTGTCCTGTGCCGTCAGCTGGGATGTGGCCA...TGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR TCA 90 bp | ACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATCGCCACCTTCGCAGTaGACATTGTCCAGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TAQASWMWVQKGRIGGTISPPSQ*TLSSRI Trigger: TATCCTGCTGGACAATGTTCACTGCGAAGGTGGCGA...TATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | AAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCACAGGCTTCCATCCCCTaGTCCATCCATCAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDRQFLIGSFDMVWSTEPQASIP*SIHQAG Trigger: CCCAGCCTGATGGATGGAGCAGGGGATGGAAGCCTG...TGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR GCA 90 bp | GAAGGCATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTAACAACAGCAGCATCCTaGAGCCCCCAGTCATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGILGKDRQFLIGSFDMVTTAAS*SPQSSS Trigger: CGACGATGACTGGGGGCTGCAGGATGCTGCTGTTGT...TACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGATGCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | AAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCACCAGCCTGCTGGACTTaGAGTCCCAGTTCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDRQFLIGSFDMVWSTEPPACWT*SPSSSG Trigger: CCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGG...TGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTAGACTGGGCATTCGGGTaGTCTCAGAACCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGILGKDRQFLIGSFDMVDWAFG*SQNQPA Trigger: AGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTC...TACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGATGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| 3UTR CAA 72 bp | CCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATaGGGGGTACTATATGAGTTCCCCCAAAGAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKPHGCGCRREG*GVLYEFPQREV Trigger: CACTTCTCTTTGGGGGAACTCATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTAGTCTCAGAACCAGCCTaGTGGACTTGGAGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGILGKDRQFLIGSFDMVVSEPA*WTWSPS Trigger: ACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGAC...TACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGATGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | GAGACCAAGAGAGGTCACGGTAAGGGTTTGAAGGCATTTACAGACAGCCCAAGCGCCAATTTGCATCTCTaGTTCCTTGGGTGTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETKRGHGKGLKAFTDSPSANLHL*FLGCPA Trigger: GGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGC...GCTTGGGCTGTCTGTAAATGCCTTCAAACCCTTACCGTGACCTCTCTTGGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAACAGCAGCATCCTaGAGCCCCCAGTCATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDRQFLIGSFDMVWSTTAAS*SPQSSS Trigger: CGACGATGACTGGGGGCTGCAGGATGCTGCTGTTGT...ACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTGACTGGGCATTCGGGTaGTCTCAGAACCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKDRQFLIGSFDMVWSDWAFG*SQNQPA Trigger: AGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTC...ACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGCTGGCACAAGACACTaGCATCCTCGCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKDRQFLIGSFDMVWSTAGTRH*HPRCGH Trigger: GTGACCACAGCGAGGATGCCAGTGTCTTGTGCCAGC...TGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCCAGGGTTCTTTGTTGCTGGCACAAGACACTaGCATCCTCGCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIDLAPKDSGYGPPGFFVAGTRH*HPRCGH Trigger: GTGACCACAGCGAGGATGCCAGTGTCTTGTGCCAGC...AACAAAGAACCCTGGAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGCTATGTTCACTGTACCCCAGCCTAGGCTCTaGCAGGCTGCCAGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLTFSDLAEQNIAMFTVPQPRL*QAARRG Trigger: GCCCCGCCTGGCAGCCTGCCAGAGCCTAGGCTGGGG...TACAGTGAACATAGCAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACAGAGCCAACGGAGGCAGAGCTGTaGAAGTCGGAGGGCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDRQFLIGSFDMVWSTEPTEAEL*KSEGLE Trigger: TTCTAAGCCCTCCGACTTCCACAGCTCTGCCTCCGT...TGGCTCTGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCCCAAAGAGAAGTGGGTTATTCTCTCACATTTTCTGATTTGGCTGAGCAGTGTCCCTGGAAGGTaGGGCACCAACTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPKEKWVILSHFLIWLSSVPGR*GTNSCS Trigger: GCTACAGGAGTTGGTGCCTCACCTTCCAGGGACACT...GCTCAGCCAAATCAGAAAATGTGAGAGAATAACCCACTTCTCTTTGGGGGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAGTGGGTTATTCTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGGATGGAAGCAGTCGCTaGGGCGGGCCTCAGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVILSHFLIWLSKTLDGSSR*GGPQYR Trigger: CCGGTACTGAGGCCCGCCTCAGCGACTGCTTCCATC...CAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAGAATAACCCACTTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGCTATGTTCACTGTATTGGGTCTCAGAACCAGCCTaGTGGACTTGGAGTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLIWLSKTLLCSLYWVSEPA*WTWSPS Trigger: ACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGAC...CCAATACAGTGAACATAGCAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAGTGGGTTATTCTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGGGCTGGGGGCCAATTTaGATCTCTGCTTCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVILSHFLIWLSKTLGWGPI*ISASLG Trigger: ACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCC...CAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAGAATAACCCACTTCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAGTGGGTTATTCTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGGTTGGGGGCTGTGTGTaGAAGAATTCATCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWVILSHFLIWLSKTLVGGCV*KNSSHR Trigger: CCTGTGTGATGAATTCTTGCACACACAGCCCCCAAC...CAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAGAATAACCCACTTCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS CCA 90 bp | CTAGCAGCACAGGGCCTCGGCCATAGCCAAAATGACCAAGGCCCGTaGCGCCTAGCGCGGGCCCGCAACCCGCCTCGCGACAGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LAAQGLGHSQNDQGP*RLARARNPPRDRPP Trigger: GGGTGGCCTGTCGCGAGGCGGGTTGCGGGCCCGCGCTAGGCGCCACGGGCCTTGGTCATTTTGGCTATGGCCGAGGCCCTGTGCTGCTAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS TCA 90 bp | CGGGCTCGGGCCCCCGACCAGCCTCAGCCTTCCGCTTTTCTTCCCTaGGGCCCGGGCTGCTGTCGTCAGCCACACAGTGTCCCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RARAPDQPQPSAFLP*GPGCCRQPHSVPGR Trigger: CCTTCCAGGGACACTGTGTGGCTGACGACAGCAGCCCGGGCCTCAGGGAAGAAAAGCGGAAGGCTGAGGCTGGTCGGGGGCCCGAGCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS GCA 90 bp | CTTCCTGCCCGCGGCACTCCACATTATCCAGGAAAATGGGCCCTCTaGCCTGGCCAAAGGCGAGGGGCCGTGGCACCGGCAATGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPARGTPHYPGKWAL*PGQRRGAVAPAMPG Trigger: GCCTGGCATTGCCGGTGCCACGGCCCCTCGCCTTTGGCCAGGGCAGAGGGCCCATTTTCCTGGATAATGTGGAGTGCCGCGGGCAGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
||
| CDS CCA 90 bp | TGCCCGCGGCACTCCACATTATCCAGGAAAATGGGCCCTCTGCCCTaGCCAAAGGCGAGGGGCCGTGGCACCGGCAATGCCAGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CPRHSTLSRKMGPLP*PKARGRGTGNARPQ Trigger: CTGTGGCCTGGCATTGCCGGTGCCACGGCCCCTCGCCTTTGGCCAGGGCAGAGGGCCCATTTTCCTGGATAATGTGGAGTGCCGCGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCAATCTCCACTCGGCCTaGACACGGGCTGGCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGTASLPCTGRKGYQEPNLHSA*TRAGAA Trigger: GGCGGCGCCAGCCCGTGTCAAGGCCGAGTGGAGATT...GGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS CCA 90 bp | GGGCCCCCTACCAGCCTCAGTTCTGGAAAGGGCAGCGGAGTGGGCTaGAGGGCACTGGCCAGTGGGAACAGAAGGAGGAAGGACAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPPTSLSSGKGSGVG*RALASGNRRRKDSA Trigger: AGCACTGTCCTTCCTCCTTCTGTTCCCACTGGCCAGTGCCCTCCAGCCCACTCCGCTGCCCTTTCCAGAACTGAGGCTGGTAGGGGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
||
| CDS CCA 90 bp | CTGGGCCGAGGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTGCTaGACTTGGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGRGLGIRVVSEPAC*TWSPSSSGPAQSAP Trigger: CGGAGCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCCTCGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS CCA 90 bp | CGAGGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTGCTGGACTTaGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGCTCCGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGLGIRVVSEPACWT*SPSSSGPAQSAPAS Trigger: AGACGCCGGAGCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS GCA 90 bp | TCTACGCGCCCCTCACATCGGTGTGTTCCACTAGCCAGACGGAGGTaGCCATCTCTGGGCCGAGGACTGGGCATTCGGGTGGTCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: STRPSHRCVPLARRR*PSLGRGLGIRVVSE Trigger: TTCTGAGACCACCCGAATGCCCAGTCCTCGGCCCAGAGATGGGCACCTCCGTCTGGCTAGTGGAACACACCGATGTGAGGGGCGCGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS GCA 90 bp | TCTCTGGGCCGAGGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTaGTGGACTTGGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGRGLGIRVVSEPA*WTWSPSSSGPAQSA Trigger: AGCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCCTCGGCCCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS GCA 90 bp | CTGCCACATCTTCATAGTGAAAGCAGTTGTGGACACCCCAGCCCCTaGTGCCACACTCGCTCAGAGACGCTTCCTGCCCGCGGCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPHLHSESSCGHPSP*CHTRSETLPARGTP Trigger: TGGAGTGCCGCGGGCAGGAAGCGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCCACAACTGCTTTCACTATGAAGATGTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
||
| CDS GCA 90 bp | CCAACTCCTGTAGCTGCGGAGACAAGGGAGCCTGCTGGCCCAGTGTaGCGTGCCCAGTCTTCTTTTGTGACAGACGGAGGCAGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPVAAETREPAGPV*RAQSSFVTDGGRAV Trigger: CACAGCTCTGCCTCCGTCTGTCACAAAAGAAGACTGGGCACGGCACACTGGGCCAGCAGGCTCCCTTGTCTCCGCAGCTACAGGAGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153823.8 |
||
| CDS GCA 90 bp | CCACATCTTCATAGTGAAAGCAGTTGTGGACACCCCAGCCCCTGCTaGCACACTCGCTCAGAGACGCTTCCTGCCCGCGGCACTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PHLHSESSCGHPSPC*HTRSETLPARGTPH Trigger: ATGTGGAGTGCCGCGGGCAGGAAGCGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCCACAACTGCTTTCACTATGAAGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGGTACTGCATCTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCTCGCTGTGGTCACAGTaGTGGACATCCCAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RAGTASLPCTGRKGYQEPSLWSQ*WTSQRI Trigger: TATCCGCTGGGATGTCCACAACTGTGACCACAGCGA...GGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAGATGCAGTACCTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATAATCTCCACTCGGCCTaGACACGGGCTGGCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPKPHGCGCRREGLGVLYNLHSA*TRAGAA Trigger: GGCGGCGCCAGCCCGTGTCAAGGCCGAGTGGAGATT...ATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS GCA 90 bp | CCAGGCTTCCATCCCCTGCTCCATCCATCAGGCTGGGGGCCAATTTaGATCTCTGCTTCCTTGGGTGTCCAGCCAATGGATGGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFHPLLHPSGWGPI*ISASLGVQPMDGLS Trigger: GGAAAGGCCATCCATTGGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCTGATGGATGGAGCAGGGGATGGAAGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGACCAGCCTGCTGGACTaGGAGTCCCAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHARGERGTRNPSYHRKTSLLD*ESQFLW Trigger: CCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGT...CTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCATTAACACCTTCCTTGTaGGGGGCTGTGTGTGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLQPPCSAEHHLSPGPHPLTPSL*GAVCAR Trigger: TCTTGCACACACAGCCCCCAACAAGGAAGGTGTTAA...TGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCCCCCTTGTTCAGCGGAGCACCATCTGAGTCCAGGTCCTCACCCAGCATGGTTAACACCTTCCTaGTTGGGGGCTGTGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQPPCSAEHHLSPGPHPAWLTPS*LGAVCA Trigger: TGCACACACAGCCCCCAACAAGGAAGGTGTTAACCA...TGCTGGGTGAGGACCTGGACTCAGATGGTGCTCCGCTGAACAAGGGGGCTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATACCAGCCTGCTGGACTaGGAGTCCCAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPKPHGCGCRREGLGVLYTSLLD*ESQFLW Trigger: CCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGT...ATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGTCGCTGTGGTCACAGTaGTGGACATCCCAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LSHARGERGTRNPSYHRKSLWSQ*WTSQRI Trigger: TATCCGCTGGGATGTCCACAACTGTGACCACAGCGA...CTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCATGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACGGGGAGAAAGGGGTACCAGGAACCCGAGCTATCATAGGAAGGCATCCTAGGCTGGGGGCCAATTaGCATCTCTGCTTCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MHGEKGVPGTRAIIGRHPRLGAN*HLCFLG Trigger: CCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCT...AGGATGCCTTCCTATGATAGCTCGGGTTCCTGGTACCCCTTTCTCCCCGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAGACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTCTCACCTTTTCCATTTaGGAGGGCTGTAGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTAQASWMWVQKGRIGGTLTFSI*EGCSGC Trigger: GCACCCGCTACAGCCCTCCAAAATGGAAAAGGTGAG...AGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGATAATGCTTTATTGACTTGGCACCTAAGGACAGTGGCTATGGGCCTCACCAGCCTGCTGGACTaGGAGTCCCAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGDNALLTWHLRTVAMGLTSLLD*ESQFLW Trigger: CCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGT...GAGGCCCATAGCCACTGTCCTTAGGTGCCAAGTCAATAAAGCATTATCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAGACAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTCCTCGGCATTTGACATaGTCCAAGAGGATTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTAQASWMWVQKGRIGGTPRHLT*SKRIGP Trigger: AGGCCCAATCCTCTTGGACAATGTCAAATGCCGAGG...AGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGCCTCATGGATGTGGGTGCAGAAGGGAAGGATTGGGGGTACTATATTCGCTGTGGTCACAGTaGTGGACATCCCAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QPKPHGCGCRREGLGVLYSLWSQ*WTSQRI Trigger: TATCCGCTGGGATGTCCACAACTGTGACCACAGCGA...ATATAGTACCCCCAATCCTTCCCTTCTGCACCCACATCCATGAGGCTTGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054895.4 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTGATGGCCTGGTTCTTCTGCAGTCCCCTGCCAGTCTATAGAAAAGAGCTCACCTTTTCCATTTaGGAGGGCTGTAGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKVMAWFFCSPLPVYRKELTFSI*EGCSGC Trigger: GCACCCGCTACAGCCCTCCAAAATGGAAAAGGTGAG...CTCTTTTCTATAGACTGGCAGGGGACTGCAGAAGAACCAGGCCATCACCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS CCA 90 bp | GGAGGCAGAGCTGTGGAAGTCGGAGGGCTTAGAACTTTTCCATTTTaGAGGGCTGTAGCGGGTGCCATACTGGTTAACACCTTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGRAVEVGGLRTFPF*RAVAGAILVNTFLV Trigger: AACAAGGAAGGTGTTAACCAGTATGGCACCCGCTACAGCCCTCCAAAATGGAAAAGTTCTAAGCCCTCCGACTTCCACAGCTCTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154696.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACATCGCTGTGGTCACAGTaGTGGACATCCCAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LGKDRQFLIGSFDMVWSTSLWSQ*WTSQRI Trigger: TATCCGCTGGGATGTCCACAACTGTGACCACAGCGA...TGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CAAAACATTGCTATGTTCACTGTATTGGGCCTTCCGCAGGTGATAACAGTCTCGAGGCTGGGGGCCAATTaGCATCTCTGCTTCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QNIAMFTVLGLPQVITVSRLGAN*HLCFLG Trigger: CCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCT...CGAGACTGTTATCACCTGCGGAAGGCCCAATACAGTGAACATAGCAATGTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACACCTCGGCATTTGACATaGTCCAAGAGGATTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGKDRQFLIGSFDMVWSTPRHLT*SKRIGP Trigger: AGGCCCAATCCTCTTGGACAATGTCAAATGCCGAGG...TGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAAGGACAGGCAGTTCCTCATAGGCTCCTTTGATATGGTATGGAGTACATGGTTAACACCTTCCTaGTTGGGGGCTGTGTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGKDRQFLIGSFDMVWSTWLTPS*LGAVCA Trigger: TGCACACACAGCCCCCAACAAGGAAGGTGTTAACCA...TGTACTCCATACCATATCAAAGGAGCCTATGAGGAACTGCCTGTCCTTTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACATTTTCTGATTTGGCTGAGCAAAACATTGCTATGTTCACTGTATTGGTTAACACCTTCCTTGTaGGGGGCTGTGTGTGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LSHFLIWLSKTLLCSLYWLTPSL*GAVCAR Trigger: TCTTGCACACACAGCCCCCAACAAGGAAGGTGTTAA...CCAATACAGTGAACATAGCAATGTTTTGCTCAGCCAAATCAGAAAATGTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CCA 72 bp | CAGGGCCTCGGCCATAGCCAAAATGACCAAGGCCCGTaGCGCCTAGCGCGGGCCCGCAACCCGCCTCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: QGLGHSQNDQGP*RLARARNPPRD Trigger: GTCGCGAGGCGGGTTGCGGGCCCGCGCTAGGCGCCACGGGCCTTGGTCATTTTGGCTATGGCCGAGGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CCA 72 bp | AATGGGCCCTCTGCCCTGGCCAAAGGCGAGGGGCCGTaGCACCGGCAATGCCAGGCCACAGCCCAGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: NGPSALAKGEGP*HRQCQATAQLT Trigger: CGTCAGCTGGGCTGTGGCCTGGCATTGCCGGTGCCACGGCCCCTCGCCTTTGGCCAGGGCAGAGGGCCCATT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
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| CDS TCA 72 bp | GCCCCCGACCAGCCTCAGCCTTCCGCTTTTCTTCCCTaGGGCCCGGGCTGCTGTCGTCAGCCACACAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: APDQPQPSAFLP*GPGCCRQPHSV Trigger: GACACTGTGTGGCTGACGACAGCAGCCCGGGCCTCAGGGAAGAAAAGCGGAAGGCTGAGGCTGGTCGGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CAA 90 bp | CCGAGGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTGCTGGACTaGGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGCTCCGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PRTGHSGGLRTSLLD*ESQFLWACTKRSGV Trigger: GACGCCGGAGCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS GCA 72 bp | CATAGTGAAAGCAGTTGTGGACACCCCAGCCCCTGCTaGCACACTCGCTCAGAGACGCTTCCTGCCCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: HSESSCGHPSPC*HTRSETLPARG Trigger: GCCGCGGGCAGGAAGCGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCCACAACTGCTTTCACTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
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| CDS CCA 72 bp | CACTCCACATTATCCAGGAAAATGGGCCCTCTGCCCTaGCCAAAGGCGAGGGGCCGTGGCACCGGCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: HSTLSRKMGPLP*PKARGRGTGNA Trigger: GGCATTGCCGGTGCCACGGCCCCTCGCCTTTGGCCAGGGCAGAGGGCCCATTTTCCTGGATAATGTGGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
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| CDS GCA 72 bp | CAGCCCCTGCTGCCACACTCGCTCAGAGACGCTTCCTaGCCGCGGCACTCCACATTATCCAGGAAAATGGGC | + |
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Preference number: 6 (lower is better) Translates to: QPLLPHSLRDAS*PRHSTLSRKMG Trigger: GCCCATTTTCCTGGATAATGTGGAGTGCCGCGGGCAGGAAGCGTCTCTGAGCGAGTGTGGCAGCAGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
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| CDS GCA 72 bp | TGCGGAGACAAGGGAGCCTGCTGGCCCAGTGTGCCGTaGCCAGTCTTCTTTTGTGACAGACGGAGGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CGDKGACWPSVP*PVFFCDRRRQS Trigger: GCTCTGCCTCCGTCTGTCACAAAAGAAGACTGGGCACGGCACACTGGGCCAGCAGGCTCCCTTGTCTCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153823.8 |
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| CDS CAA 72 bp | GGGCATTCGGGTGGTCTCAGAACCAGCCTGCTGGACTaGGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GHSGGLRTSLLD*ESQFLWACTKR Trigger: GCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS GCA 72 bp | CTTCATAGTGAAAGCAGTTGTGGACACCCCAGCCCCTaGTGCCACACTCGCTCAGAGACGCTTCCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LHSESSCGHPSP*CHTRSETLPAR Trigger: GCGGGCAGGAAGCGTCTCTGAGCGAGTGTGGCAGCAGGGGCTGGGGTGTCCACAACTGCTTTCACTATGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 ENSMUST00000154696.2 |
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| CDS GCA 72 bp | GGCACCAACTCCTGTAGCTGCGGAGACAAGGGAGCCTaGTGGCCCAGTGTGCCGTGCCCAGTCTTCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GTNSCSCGDKGA*WPSVPCPVFFC Trigger: ACAAAAGAAGACTGGGCACGGCACACTGGGCCAGCAGGCTCCCTTGTCTCCGCAGCTACAGGAGTTGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153823.8 |
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| CDS CCA 72 bp | GGCATTCGGGTGGTCTCAGAACCAGCCTGCTGGACTTaGAGTCCCAGTTCCTCTGGGCCTGCACAAAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GIRVVSEPACWT*SPSSSGPAQSA Trigger: AGCGCTTTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CCA 72 bp | GGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTGCTaGACTTGGAGTCCCAGTTCCTCTGGGCCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: GLGIRVVSEPAC*TWSPSSSGPAQ Trigger: TTGTGCAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CCA 72 bp | GGACTGGGCATTCGGGTGGTCTCAGAACCAGCCTGCTaGACTTGGAGTCCCAGTTCCTCTGGGCCTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GLGIRVVSEPAC*TWSPSSSGPVF Trigger: GAAAACAGGCCCAGAGGAACTGGGACTCCAAGTCCAGCAGGCTGGTTCTGAGACCACCCGAATGCCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054895.4 |
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| CDS CCA 72 bp | ACCAACTCCTGTAGCTGCGGAGACAAGGGAGCCTGCTaGCCCAGTGTGCCGTGCCCAGTCTTCTTTTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: TNSCSCGDKGAC*PSVPCPVFFCD Trigger: GTCACAAAAGAAGACTGGGCACGGCACACTGGGCCAGCAGGCTCCCTTGTCTCCGCAGCTACAGGAGTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153823.8 |
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| CDS CAA 90 bp | CCCAGGCTTCCATCCCCTGCTCCATCCATCAGGCTGGGGGCCAATTaGCATCTCTGCTTCCTTGGGTGTCCAGCCAATGGATGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PRLPSPAPSIRLGAN*HLCFLGCPANGWPF Trigger: GAAAGGCCATCCATTGGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCTGATGGATGGAGCAGGGGATGGAAGCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
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| CDS CCA 72 bp | CATCAGGCTGGGGGCCAATTTGCATCTCTGCTTCCTTaGGTGTCCAGCCAATGGATGGCCTTTCCGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: HQAGGQFASLLP*VSSQWMAFPTV Trigger: GACCGTCGGAAAGGCCATCCATTGGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
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| CDS GCA 72 bp | CATCCCCTGCTCCATCCATCAGGCTGGGGGCCAATTTaGATCTCTGCTTCCTTGGGTGTCCAGCCAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: HPLLHPSGWGPI*ISASLGVQPMD Trigger: ATCCATTGGCTGGACACCCAAGGAAGCAGAGATGCAAATTGGCCCCCAGCCTGATGGATGGAGCAGGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111152.8 ENSMUST00000111153.8 ENSMUST00000154181.2 |
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| CDS TCA 72 bp | TCGCTGTGGTCACAGTTGTGGACATCCCAGCGGATATaGGAGCACAGTAGCAAGGTGCTCTCATCTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SLWSQLWTSQRI*EHSSKVLSSPR Trigger: CCGAGGAGATGAGAGCACCTTGCTACTGTGCTCTCATATCCGCTGGGATGTCCACAACTGTGACCACAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054895.4 ENSMUST00000111150.2 ENSMUST00000111152.8 ENSMUST00000111153.8 |
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| CDS CCA 72 bp | GCTGTGGAAGTCGGAGGGCTTAGAACTTTTCCATTTTaGAGGGCTGTAGCGGGTGCCATACTGGTTAACACC | + |
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Preference number: 6 (lower is better) Translates to: AVEVGGLRTFPF*RAVAGAILVNT Trigger: GGTGTTAACCAGTATGGCACCCGCTACAGCCCTCCAAAATGGAAAAGTTCTAAGCCCTCCGACTTCCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154696.2 |
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