Pregenerated sensors for SSBP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070003Ensembl transcript IDs: ENSMUST00000049908.11, ENSMUST00000210369.2, ENSMUST00000210580.2, ENSMUST00000211197.2, ENSMUST00000211608.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCGGCCGGCCGGGCTAGCCAGGAGTCCGGATGGCAGGGGTGCTaGCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: LPAGRASQESGWQGC*RDRDLTSRTLGSGR Trigger: CCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCATCCGGACTCCTGGCTAGCCCGGCCGGCCGGCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| 3UTR GCA 90 bp | GCCCTGCCGGCCGGCCGGGCTAGCCAGGAGTCCGGATGGCAGGGGTaGTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ALPAGRASQESGWQG*CRDRDLTSRTLGSG Trigger: GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCATCCGGACTCCTGGCTAGCCCGGCCGGCCGGCAGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACAGCCAGGAGTCCGGATaGCAGGGGTGCTGCCGCGAC | + |
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Preference number: 2 (lower is better) Translates to: PRPRPHQQDPGLRPGLSHSQESG*QGCCRD Trigger: GTCGCGGCAGCACCCCTGCCATCCGGACTCCTGGCT...GTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| 3UTR GCA 72 bp | GCCGGCCGGGCTAGCCAGGAGTCCGGATGGCAGGGGTaGTGCCGCGACCGAGACCTCACCAGCAGGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: AGRASQESGWQG*CRDRDLTSRTL Trigger: CAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCATCCGGACTCCTGGCTAGCCCGGCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| 3UTR GCA 72 bp | CCAACACTGGCCATTCCTCTTGGAGGGGTCACCCTCTaGATCGGGCCTCCCAGGCTGGGGTGTCCCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: PTLAIPLGGVTL*IGPPRLGCPCT Trigger: AGTGCAGGGACACCCCAGCCTGGGAGGCCCGATGCAGAGGGTGACCCCTCCAAGAGGAATGGCCAGTGTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211197.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTTTCTCTGAGGTCCTTTaGAGTTTGTGTGTGTATATG | + |
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Preference number: 3 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSFSEVL*SLCVYM Trigger: CATATACACACACAAACTCAAAAGGACCTCAGAGAA...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | GGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACAGCTTCTCGCGCGCCTaGCCGTCCGAGGGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GCCRDRDLTSRTLGSGRDSFSRA*PSEGAQ Trigger: CTGCGCGCCCTCGGACGGGCAGGCGCGCGAGAAGCT...GTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | GGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACGCTGGGACTGGCCCATaGGCCACGCACTCCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: GCCRDRDLTSRTLGSGRDAGTGP*ATHSWT Trigger: GGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGC...GTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAGTGTCCCTGCACTCGTaGGGAGGGGTCCATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGVSLHS*GGVHGS Trigger: GCTGCCATGGACCCCTCCCCACGAGTGCAGGGACAC...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCTCGGGCCTCCCAGGCTaGGGTGTCCCTGCACTCGTG | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGSGLPG*GVPALV Trigger: CACGAGTGCAGGGACACCCCAGCCTGGGAGGCCCGA...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGCAGGACCTGGCTGGTaGCAAGGGAGTTGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GRGAAATETSPAGPWAQAAGPGW*QGSWVG Trigger: CCCCACCCAACTCCCTTGCCACCAGCCAGGTCCTGC...GGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTGCTGGGACTGGCCCATaGGCCACGCACTCCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: GAAATETSPAGPWAQAGTAGTGP*ATHSWT Trigger: GGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGC...AGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCGGGCTGGAAGAAGCCTaGTGCCACAGGGCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGGLEEA*CHRACC Trigger: GCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCCC...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGATCGAGTTACCGCTaGGACTGGCCCATGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GRGAAATETSPAGPWAQAGSSYR*DWPMGH Trigger: GTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCC...GGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAGTTCACAGGCCTCCCTaGGGTCTGGTGCCGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGVHRPP*GLVPHN Trigger: ATTGTGCGGCACCAGACCGCAGGGAGGCCTGTGAAC...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR GCA 90 bp | GGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCCACAGGGCTGGGAGCTaGTGCTGCGCTATAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GRGAAATETSPAGPWAQAHRAGS*CCAIVL Trigger: CAGGACTATAGCGCAGCAGCAGCTCCCAGCCCTGTG...GGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCACGGCAGGACCTGGCTaGTGGCAAGGGAGTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGTAGPG*WQGSWV Trigger: CACCCAACTCCCTTGCCACCAGCCAGGTCCTGCCGT...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTACGGCAGGACCTGGCTaGTGGCAAGGGAGTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GAAATETSPAGPWAQAGTTAGPG*WQGSWV Trigger: CACCCAACTCCCTTGCCACCAGCCAGGTCCTGCCGT...AGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGATGGGCCACGCACTCCTaGACCCATGTTCATGGACGG | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGWATHS*THVHGR Trigger: CCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCA...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR TCA 90 bp | GGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACGGAACCGTGGTGACATaGAGGGCTGGAAGAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCCRDRDLTSRTLGSGRDGTVVT*RAGRSL Trigger: CAGGCTTCTTCCAGCCCTTCATGTCACCACGGTTCC...GTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAGCTGGGAGCTGCTGCTaGGCTATAGTCCTGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGAGSCC*AIVLED Trigger: GTCTTCCAGGACTATAGCGCAGCAGCAGCTCCCAGC...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | CTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCAGGGCTGGAAGAAGCCTaGTGCCACAGGGCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LPRPRPHQQDPGLRPGLSGLEEA*CHRACC Trigger: GCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCCC...TGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCAGGCCCACAGGAGGCTaGCCTGGCATCCTTAGGATT | + |
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Preference number: 4 (lower is better) Translates to: GRGAAATETSPAGPWAQARPTGG*PGILRI Trigger: AATCCTAAGGATGCCAGGCCAGCCTCCTGTGGGCCT...GGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | CTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCAGCAGGACCTGGCTGGTaGCAAGGGAGTTGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPRPRPHQQDPGLRPGLSAGPGW*QGSWVG Trigger: CCCCACCCAACTCCCTTGCCACCAGCCAGGTCCTGC...TGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAAGGGATCCGTTCACGTaGTGTGGCTCCATCGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGRDPFT*CGSIVL Trigger: GAGCACGATGGAGCCACACCACGTGAACGGATCCCT...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACAGGGATCCGTTCACGTaGTGTGGCTCCATCGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GCCRDRDLTSRTLGSGRDRDPFT*CGSIVL Trigger: GAGCACGATGGAGCCACACCACGTGAACGGATCCCT...GTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCTGGTGCCACAGGGCCTaGTGCCATTGCATCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGWCHRA*CHCIVW Trigger: CCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCA...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAAGACTTTGGCCTCACTaGAGTGTTCACAGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGRLWPH*SVHRPP Trigger: GGGAGGCCTGTGAACACTCCAGTGAGGCCAAAGTCT...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCATCGTTTGGGGTCATaGCACCCATCACAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGHRLGS*HPSQGW Trigger: CCAGCCCTGTGATGGGTGCCATGACCCCAAACGATG...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAGGTGACATGAAGGGCTaGAAGAAGCCTGGTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGGDMKG*KKPGAT Trigger: TGTGGCACCAGGCTTCTTCCAGCCCTTCATGTCACC...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGTGACATGAAGGGCTaGAAGAAGCCTGGTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GRGAAATETSPAGPWAQAGDMKG*KKPGAT Trigger: TGTGGCACCAGGCTTCTTCCAGCCCTTCATGTCACC...GGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | CCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCATTCGGGCCTCCCAGGCTaGGGTGTCCCTGCACTCGTG | + |
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Preference number: 4 (lower is better) Translates to: PRPHQQDPGLRPGLSHAHSGLPG*GVPALV Trigger: CACGAGTGCAGGGACACCCCAGCCTGGGAGGCCCGA...ATGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | ACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCAGGATCGAGTTACCGCTaGGACTGGCCCATGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TETSPAGPWAQAGTITRSGSSYR*DWPMGH Trigger: GTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCC...TGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCGCCCGATGGGATTCATaGTGGTGTACATATTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: WQGCCRDRDLTSRTLGSGARWDS*WCTYSR Trigger: GCGAGAATATGTACACCATCATGAATCCCATCGGGC...GCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | CCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCATGGTCATGCCGGTGGTGCCACAGGGCCTaGTGCCATTGCATCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PAGPWAQAGTITRSWSCRWCHRA*CHCIVW Trigger: CCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCA...CCGGCATGACCATGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | CACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCATGGTCATGCCCTGGAAGAAGCCTGGTaGCACAGGGCCTGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HQQDPGLRPGLSHAHGHALEEAW*HRACCH Trigger: ATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAG...GGCATGACCATGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGATGTACATATTCTCGCTaGAGTTGGTGGAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGCTYSR*SWWSLQ Trigger: CTGGAGACTCCACCAACTCCAGCGAGAATATGTACA...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | ACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCAAGGCCCACAGGAGGCTaGCCTGGCATCCTTAGGATT | + |
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Preference number: 4 (lower is better) Translates to: TETSPAGPWAQAGTITRSRPTGG*PGILRI Trigger: AATCCTAAGGATGCCAGGCCAGCCTCCTGTGGGCCT...TGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGACTTGTACATATTCTCGCTaGAGTTGGTGGAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GAAATETSPAGPWAQAGTCTYSR*SWWSLQ Trigger: CTGGAGACTCCACCAACTCCAGCGAGAATATGTACA...AGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTGTGTCCCTGCACTCGTaGGGAGGGGTCCATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSVSLHS*GGVHGS Trigger: GCTGCCATGGACCCCTCCCCACGAGTGCAGGGACAC...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR TCA 90 bp | CACCAGCAGGACCCTGGGCTCAGGCCGGGACTATCACACGCTCATGGTCATGCCGCCCGATGGGATTCATaGTGGTGTACATATTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: HQQDPGLRPGLSHAHGHAARWDS*WCTYSR Trigger: GCGAGAATATGTACACCATCATGAATCCCATCGGGC...GGCATGACCATGAGCGTGTGATAGTCCCGGCCTGAGCCCAGGGTCCTGCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTCTGGAAGAAGCCTGGTaGCACAGGGCCTGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSLEEAW*HRACCH Trigger: ATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAG...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR CCA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTCACCCATCACAGGGCTaGGAGCTGCTGCTGCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSHPSQG*ELLLRY Trigger: ATAGCGCAGCAGCAGCTCCCAGCCCTGTGATGGGTG...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CCA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTTGGGCCACGCACTCCTaGACCCATGTTCATGGACGG | + |
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Preference number: 4 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSWATHS*THVHGR Trigger: CCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCA...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS-3UTR GCA 90 bp | GCCTTGTGTGCACAGAGGTCCAGAGGCCTGCACTTCTCTGAGGTCCTTTTGAGTAGGGCTGGGAGCTGCTaGTGCGCTATAGTCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ALCAQRSRGLHFSEVLLSRAGSC*CAIVLE Trigger: TTCCAGGACTATAGCGCAGCAGCAGCTCCCAGCCCT...ACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTCTGTGCACACAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049908.11 |
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| CDS-3UTR CAA 90 bp | GGGGTGCTGCCGCGACCGAGACCTCACCAGCAGGACCCTGGGCTCAGGCCGGGAATATTCTCGCTGGAGTaGGTGGAGTCTCCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GVLPRPRPHQQDPGLRPGIFSLE*VESPGL Trigger: CAGCCCTGGAGACTCCACCAACTCCAGCGAGAATAT...TCCCGGCCTGAGCCCAGGGTCCTGCTGGTGAGGTCTCGGTCGCGGCAGCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS TCA 90 bp | AGGGGCTCCGCCTCCTCCTGCGGGTCCCGAGTAGCTGCCAGGAGATaGGGAAGAGTACGGGATCGAGTTACCGCTGGGACTGGCCCATGG | + |
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Preference number: 5 (lower is better) Translates to: RGSASSCGSRVAARR*GRVRDRVTAGTGPW Trigger: CCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCATCTCCTGGCAGCTACTCGGGACCCGCAGGAGGAGGCGGAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 90 bp | CGGGATCGAGTTACCGCTGGGACTGGCCCATGGGCCACGCACTCCTaGACCCATGTTCATGGACGGCAGGACCTGGCTGGTGGCAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RDRVTAGTGPWATHS*THVHGRQDLAGGKG Trigger: TCCCTTGCCACCAGCCAGGTCCTGCCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS GCA 90 bp | CACAGTCAGCTGGCACAGCTGGAAGAAGCCTGGTGCCACAGGGCCTaGTGCCATTGCATCGTTTGGGGTCATGGCACCCATCACAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: HSQLAQLEEAWCHRA*CHCIVWGHGTHHRA Trigger: AGCCCTGTGATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAGCTGACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS CCA 90 bp | TGCCAGGAGATGAGGAAGAGTACGGGATCGAGTTACCGCTGGGACTaGCCCATGGGCCACGCACTCCTGGACCCATGTTCATGGACGGCA | + |
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Preference number: 5 (lower is better) Translates to: CQEMRKSTGSSYRWD*PMGHALLDPCSWTA Trigger: TGCCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCATCTCCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 90 bp | AGTAGCTGCCAGGAGATGAGGAAGAGTACGGGATCGAGTTACCGCTaGGACTGGCCCATGGGCCACGCACTCCTGGACCCATGTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SSCQEMRKSTGSSYR*DWPMGHALLDPCSW Trigger: CCATGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCATCTCCTGGCAGCTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 90 bp | ATCCAGACTGCAGACCACAGTCAGCTGGCACAGCTGGAAGAAGCCTaGTGCCACAGGGCCTGCTGCCATTGCATCGTTTGGGGTCATGGC | + |
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Preference number: 5 (lower is better) Translates to: IQTADHSQLAQLEEA*CHRACCHCIVWGHG Trigger: GCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAGCTGACTGTGGTCTGCAGTCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS CCA 90 bp | TTGCTAGTCCCCTGCTGCAGATCCAGACTGCAGACCACAGTCAGCTaGCACAGCTGGAAGAAGCCTGGTGCCACAGGGCCTGCTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: LLVPCCRSRLQTTVS*HSWKKPGATGPAAI Trigger: AATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAGCTGACTGTGGTCTGCAGTCTGGATCTGCAGCAGGGGACTAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS CCA 90 bp | CTGCTGCCATTGCATCGTTTGGGGTCATGGCACCCATCACAGGGCTaGGAGCTGCTGCTGCGCTATAGTCCTGGAAGACTTTGGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LLPLHRLGSWHPSQG*ELLLRYSPGRLWPH Trigger: GTGAGGCCAAAGTCTTCCAGGACTATAGCGCAGCAGCAGCTCCCAGCCCTGTGATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049908.11 ENSMUST00000210580.2 ENSMUST00000211608.2 |
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| CDS GCA 72 bp | TACTCATATACATACAGCGCGAGCTTCTCGCGCGCCTaGCCGTCCGAGGGCGCGCAGCCCTTGCTCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: YSYTYSASFSRA*PSEGAQPLLAL Trigger: CAAGGCGAGCAAGGGCTGCGCGCCCTCGGACGGGCAGGCGCGCGAGAAGCTCGCGCTGTATGTATATGAGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049908.11 ENSMUST00000210580.2 ENSMUST00000211197.2 ENSMUST00000211608.2 |
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| CDS CCA 72 bp | TGGCCCATGGGCCACGCACTCCTGGACCCATGTTCATaGACGGCAGGACCTGGCTGGTGGCAAGGGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WPMGHALLDPCS*TAGPGWWQGSW Trigger: CCAACTCCCTTGCCACCAGCCAGGTCCTGCCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS GCA 72 bp | CAGGGGCTCCGCCTCCTCCTGCGGGTCCCGAGTAGCTaGCAGGAGATGAGGAAGAGTACGGGATCGAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: QGLRLLLRVPSS*QEMRKSTGSSY Trigger: GTAACTCGATCCCGTACTCTTCCTCATCTCCTGGCAGCTACTCGGGACCCGCAGGAGGAGGCGGAGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CAA 72 bp | AGCCTGGTGCCACAGGGCCTGCTGCCATTGCATCGTTaGGGGTCATGGCACCCATCACAGGGCTGGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLVPQGLLPLHR*GSWHPSQGWEL Trigger: CAGCTCCCAGCCCTGTGATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049908.11 ENSMUST00000210580.2 ENSMUST00000211608.2 |
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| CDS TCA 72 bp | GCCTCCTCCTGCGGGTCCCGAGTAGCTGCCAGGAGATaGGGAAGAGTACGGGATCGAGTTACCGCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: ASSCGSRVAARR*GRVRDRVTAGT Trigger: AGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCATCTCCTGGCAGCTACTCGGGACCCGCAGGAGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 72 bp | AGAGTACGGGATCGAGTTACCGCTGGGACTGGCCCATaGGCCACGCACTCCTGGACCCATGTTCATGGACGG | + |
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Preference number: 6 (lower is better) Translates to: RVRDRVTAGTGP*ATHSWTHVHGR Trigger: CCGTCCATGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 72 bp | CAGGAGATGAGGAAGAGTACGGGATCGAGTTACCGCTaGGACTGGCCCATGGGCCACGCACTCCTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: QEMRKSTGSSYR*DWPMGHALLDP Trigger: TGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCATCTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 72 bp | CCCTGCTGCAGATCCAGACTGCAGACCACAGTCAGCTaGCACAGCTGGAAGAAGCCTGGTGCCACAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PCCRSRLQTTVS*HSWKKPGATGP Trigger: AGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAGCTGACTGTGGTCTGCAGTCTGGATCTGCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS GCA 72 bp | AGGAGGCTGGAAGAAGCCTGGTGCCACAGGGCCTGCTaGCATTGCATCGTTTGGGGTCATGGCACCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RRLEEAWCHRAC*HCIVWGHGTHH Trigger: GTGATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211608.2 |
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| CDS GCA 72 bp | GCACAGCTGGAAGAAGCCTGGTGCCACAGGGCCTGCTaGCATTGCATCGTTTGGGGTCATGGCACCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: AQLEEAWCHRAC*HCIVWGHGTHH Trigger: GTGATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS GCA 72 bp | CTGGCACAGCTGGAAGAAGCCTGGTGCCACAGGGCCTaGTGCCATTGCATCGTTTGGGGTCATGGCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: LAQLEEAWCHRA*CHCIVWGHGTH Trigger: ATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS GCA 72 bp | GTTTGGGGTCATGGCACCCATCACAGGGCTGGGAGCTaGTGCTGCGCTATAGTCCTGGAAGACTTTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VWGHGTHHRAGS*CCAIVLEDFGL Trigger: GAGGCCAAAGTCTTCCAGGACTATAGCGCAGCAGCAGCTCCCAGCCCTGTGATGGGTGCCATGACCCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049908.11 ENSMUST00000210580.2 ENSMUST00000211608.2 |
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| CDS GCA 72 bp | CATGAAGGGCTGGAAGAAGCCTGGTGCCACAGGGCCTaGTGCCATTGCATCGTTTGGGGTCATGGCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: HEGLEEAWCHRA*CHCIVWGHGTH Trigger: ATGGGTGCCATGACCCCAAACGATGCAATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCCCTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS GCA 72 bp | GGGAACCGTGGTGACATGAAGGGCTTGCTAGTCCCCTaGTGCAGATCCAGACTGCAGACCACAGTCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GNRGDMKGLLVP*CRSRLQTTVSW Trigger: CCAGCTGACTGTGGTCTGCAGTCTGGATCTGCAGCAGGGGACTAGCAAGCCCTTCATGTCACCACGGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS CCA 72 bp | ATGAGGAAGAGTACGGGATCGAGTTACCGCTGGGACTaGCCCATGGGCCACGCACTCCTGGACCCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MRKSTGSSYRWD*PMGHALLDPCS Trigger: TGAACATGGGTCCAGGAGTGCGTGGCCCATGGGCCAGTCCCAGCGGTAACTCGATCCCGTACTCTTCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049908.11 ENSMUST00000210369.2 |
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| CDS CCA 72 bp | AGATCCAGACTGCAGACCACAGTCAGCTGGCACAGCTaGAAGAAGCCTGGTGCCACAGGGCCTGCTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: RSRLQTTVSWHS*KKPGATGPAAI Trigger: AATGGCAGCAGGCCCTGTGGCACCAGGCTTCTTCCAGCTGTGCCAGCTGACTGTGGTCTGCAGTCTGGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS GCA 72 bp | AACCGTGGTGACATGAAGGGCTTGCTAGTCCCCTGCTaGAGATCCAGACTGCAGACCACAGTCAGCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: NRGDMKGLLVPC*RSRLQTTVSWH Trigger: GTGCCAGCTGACTGTGGTCTGCAGTCTGGATCTGCAGCAGGGGACTAGCAAGCCCTTCATGTCACCACGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210580.2 |
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| CDS CCA 72 bp | TTGCATCGTTTGGGGTCATGGCACCCATCACAGGGCTaGGAGCTGCTGCTGCGCTATAGTCCTGGAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: LHRLGSWHPSQG*ELLLRYSPGRL Trigger: AAGTCTTCCAGGACTATAGCGCAGCAGCAGCTCCCAGCCCTGTGATGGGTGCCATGACCCCAAACGATGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049908.11 ENSMUST00000210580.2 ENSMUST00000211608.2 |
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