Pregenerated sensors for SS18L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039086Ensembl transcript IDs: ENSMUST00000041126.9
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGCCCAGCATGAAACCAGCCTGCCTCTCATGCAGACACGGCACTaGGCAGAGAGGGTGACCAACATGTCGCTACTCATCAGAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: HAQHETSLPLMQTRH*AERVTNMSLLIRTA Trigger: GGCAGTTCTGATGAGTAGCGACATGTTGGTCACCCTCTCTGCCCAGTGCCGTGTCTGCATGAGAGGCAGGCTGGTTTCATGCTGGGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 90 bp | AAACCAGCCTGCCTCTCATGCAGACACGGCACTGGGCAGAGAGGGTaGCCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: KPACLSCRHGTGQRG*PTCRYSSELPPACP Trigger: TGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACCCTCTCTGCCCAGTGCCGTGTCTGCATGAGAGGCAGGCTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 90 bp | CTGTGTCTGCCCAGTGCCTCTGCGGACATCTCCCATCTCCCACTGTaGTATATGCTAAGTCTGCAGAGATGTCCATCCACCCATAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LCLPSASADISHLPL*YMLSLQRCPSTHSP Trigger: GGGGCTATGGGTGGATGGACATCTCTGCAGACTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGGCAGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 90 bp | AAAACACCTCCTTTCTGGGCCAGGCCTGTGTCTGCCCAGTGCCTCTaGGGACATCTCCCATCTCCCACTGTGCTATATGCTAAGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: KTPPFWARPVSAQCL*GHLPSPTVLYAKSA Trigger: TGCAGACTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGGCAGACACAGGCCTGGCCCAGAAAGGAGGTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 90 bp | GAAAGGAAAACACCTCCTTTCTGGGCCAGGCCTGTGTCTGCCCAGTaGCTCTGCGGACATCTCCCATCTCCCACTGTGCTATATGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: ERKTPPFWARPVSAQ*LCGHLPSPTVLYAK Trigger: CTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGGCAGACACAGGCCTGGCCCAGAAAGGAGGTGTTTTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 90 bp | GCGCAGCGCGTAGTGGTCAGCACATCTGAAAACCCCAGTCCTCAGTaGTCAAGTTCACCAAGTATTGAACGGATGCTGGGAAACAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: AQRVVVSTSENPSPQ*SSSPSIERMLGNRR Trigger: CCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGTTTTCAGATGTGCTGACCACTACGCGCTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 90 bp | TCCTGGTGGACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATaGTTTTGTATGTTCTTGGTTGTTCTGAGCACTCATCTTCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: SWWTGLMYQALHPWG*FCMFLVVLSTHLQG Trigger: ACCTTGAAGATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGTCCACCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 90 bp | ACCCCAGTCCTCAGTGGTCAAGTTCACCAAGTATTGAACGGATGCTaGGAAACAGGAGGAAGAATGAGCAGCGATTTCCAAATCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: TPVLSGQVHQVLNGC*ETGGRMSSDFQISL Trigger: AAGGGAGATTTGGAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 90 bp | CTTTTTACAAGTTTGAACGGACACTCAGTCACTGAAGCCCACGTCTaGGAACAGGTACAACAGGAAAGGAAAACACCTCCTTTCTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LFTSLNGHSVTEAHV*EQVQQERKTPPFWA Trigger: GGCCCAGAAAGGAGGTGTTTTCCTTTCCTGTTGTACCTGTTCTCAGACGTGGGCTTCAGTGACTGAGTGTCCGTTCAAACTTGTAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 90 bp | AAAACCCCAGTCCTCAGTGGTCAAGTTCACCAAGTATTGAACGGATaGTGGGAAACAGGAGGAAGAATGAGCAGCGATTTCCAAATCTCC | + |
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Preference number: 1 (lower is better) Translates to: KTPVLSGQVHQVLNG*WETGGRMSSDFQIS Trigger: GGAGATTTGGAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 90 bp | TTTGGGATCATGGAAACTGGAGAGACACAGGCAATTGGTAAGTTCTaGAAAGGACAGCTCATGGTCCTTGCACACAAAGCACATCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: FGIMETGETQAIGKF*KGQLMVLAHKAHLP Trigger: AGGAAGATGTGCTTTGTGTGCAAGGACCATGAGCTGTCCTTTCCAGAACTTACCAATTGCCTGTGTCTCTCCAGTTTCCATGATCCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTAGCATCACGCCCAGCATaGAACCAGCCTGCCTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: RFGHTQILEMTPRAKAILASRPA*NQPASH Trigger: ATGAGAGGCAGGCTGGTTTCATGCTGGGCGTGATGC...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTAATGCAGACACGGCACTaGGCAGAGAGGGTGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: RFGHTQILEMTPRAKAILMQTRH*AERVTN Trigger: GTTGGTCACCCTCTCTGCCCAGTGCCGTGTCTGCAT...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTAAGCATGAAACCAGCCTaGCTCTCATGCAGACACGGC | + |
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Preference number: 2 (lower is better) Translates to: RFGHTQILEMTPRAKAILSMKPA*LSCRHG Trigger: GCCGTGTCTGCATGAGAGGCAGGCTGGTTTCATGCT...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 90 bp | GCACATCTGAAAACCCCAGTCCTCAGTGGTCAAGTTCACCAAGTATaGAACGGATGCTGGGAAACAGGAGGAAGAATGAGCAGCGATTTC | + |
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Preference number: 2 (lower is better) Translates to: AHLKTPVLSGQVHQV*NGCWETGGRMSSDF Trigger: GAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGTTTTCAGATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCTGGGATCATGGAAACTaGAGAGACACAGGCAATTGG | + |
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Preference number: 2 (lower is better) Translates to: KLRFGHTQILEMTPRAKAWDHGN*RDTGNW Trigger: CCAATTGCCTGTGTCTCTCCAGTTTCCATGATCCCA...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 90 bp | GTGGACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTaGTATGTTCTTGGTTGTTCTGAGCACTCATCTTCAAGGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VDRSDVPSPASLGMV*YVLGCSEHSSSRLF Trigger: GAACAACCTTGAAGATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTATAAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCCTGTTCACAGCAGCATaGACCATGATGTCTCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LYKLRFGHTQILEMTPRALFTAA*TMMSLR Trigger: TCTAAGAGACATCATGGTCCATGCTGCTGTGAACAG...GGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTTATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 90 bp | GGAGGCTGGGGGATCATTAAGTTCAGCCTCAGCTATGTAGTGAGTTaGAGGCCAGTCTGGGCTACATATAAGACACAAATAAAGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GGWGIIKFSLSYVVS*RPVWATYKTQIKQK Trigger: CTTTTGCTTTATTTGTGTCTTATATGTAGCCCAGACTGGCCTCAAACTCACTACATAGCTGAGGCTGAACTTAATGATCCCCCAGCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGGGGATGGTTTTGTATGTTCTTGGTTGTTCTGAGCACTCATCTTCACAGCAGCATGGACCATaGTGTCTCTTAGACATTGTC | + |
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Preference number: 2 (lower is better) Translates to: ASLGMVLYVLGCSEHSSSQQHGP*CLLDIV Trigger: GACAATGTCTAAGAGACATCATGGTCCATGCTGCTG...TGAAGATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 90 bp | CAGAAACTTGTTTCTGTAAAGTTAAAGCCGTCATGTAGTCAGCCCTaGCCTGTGTGTTTCCTAAACCCTGTGCCTATGAGACACATATGC | + |
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Preference number: 2 (lower is better) Translates to: QKLVSVKLKPSCSQP*PVCFLNPVPMRHIC Trigger: GCATATGTGTCTCATAGGCACAGGGTTTAGGAAACACACAGGCAAGGGCTGACTACATGACGGCTTTAACTTTACAGAAACAAGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 90 bp | CTGGGAAACAGGAGGAAGAATGAGCAGCGATTTCCAAATCTCCCTTaGCATCTTTTCTGGCCTTCAGTAGGAGGAACCATTGAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: LGNRRKNEQRFPNLP*HLFWPSVGGTIENK Trigger: TTTGTTTTCAATGGTTCCTCCTACTGAAGGCCAGAAAAGATGCAAAGGGAGATTTGGAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGGGGATGGTTTTGTATGTTCTTGGTTGTTCTGAGCACTCATCTTCACTTGTTATAGTGACATaGCCCAAGACACAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ASLGMVLYVLGCSEHSSSLVIVT*PKTQKV Trigger: CACCTTCTGTGTCTTGGGTCATGTCACTATAACAAG...TGAAGATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATCATCCTTTGGGATCATaGAAACTGGAGAGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDHPLGS*KLERHR Trigger: CCTGTGTCTCTCCAGTTTCCATGATCCCAAAGGATG...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGTACAAAGACATCCTTTaGGATCATGGAAACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TGLMYQALHPWGWFCMFLYKDIL*DHGNWR Trigger: TCTCCAGTTTCCATGATCCCAAAGGATGTCTTTGTA...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAGTCAACCACACCTGCACGAAGGGTTCATTTCAGCCTAGGACTTTTCAAAGCTGAAAAATATGCCTaGTGCATTATATGCGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TQSTTPARRVHFSLGLFKAEKYA*CIICGV Trigger: AACACCGCATATAATGCAGCAGGCATATTTTTCAGC...TTTGAAAAGTCCTAGGCTGAAATGAACCCTTCGTGCAGGTGTGGTTGACTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATGGAAAGTCTTCCTCTTTTTACAAGTTTGAACGGACACTCAGTCACTGGAAAGGACAGCTCATaGTCCTTGCACACAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MEMESLPLFTSLNGHSVTGKDSS*SLHTKH Trigger: GTGCTTTGTGTGCAAGGACCATGAGCTGTCCTTTCC...AGTGACTGAGTGTCCGTTCAAACTTGTAAAAAGAGGAAGACTTTCCATTTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATGCAATTGGTAAGTTCTaGAAAGGACAGCTCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDAIGKF*KGQLMV Trigger: GACCATGAGCTGTCCTTTCCAGAACTTACCAATTGC...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATGGAAAGTCTTCCTCTTTTTACAAGTTTGAACGGACACTCAGTCACTGTATTGAACGGATGCTaGGAAACAGGAGGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: MEMESLPLFTSLNGHSVTVLNGC*ETGGRM Trigger: CATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATAC...AGTGACTGAGTGTCCGTTCAAACTTGTAAAAAGAGGAAGACTTTCCATTTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAATGGAAAGTCTTCCTCTTTTTACAAGTTTGAACGGACACTCAGTCACTTTAAAAACTATCAGCTaGAAACAGATGTGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: MEMESLPLFTSLNGHSVTLKTIS*KQMWWC Trigger: GCACCACCACATCTGTTTTCAGCTGATAGTTTTTAA...AGTGACTGAGTGTCCGTTCAAACTTGTAAAAAGAGGAAGACTTTCCATTTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGGCTGTCTCTCATGTTTaGACAGAATTAAAACGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SKTVKINSSKLHKGALLLAVSHV*TELKRD Trigger: ATCTCGTTTTAATTCTGTGCAAACATGAGAGACAGC...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 72 bp | TCGCAGTCAGTGGTGCACACAGCATCACGCCCAGCATaGAACCAGCCTGCCTCTCATGCAGACACGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: SQSVVHTASRPA*NQPASHADTAL Trigger: CAGTGCCGTGTCTGCATGAGAGGCAGGCTGGTTTCATGCTGGGCGTGATGCTGTGTGCACCACTGACTGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 72 bp | CCTTTCTGGGCCAGGCCTGTGTCTGCCCAGTGCCTCTaGGGACATCTCCCATCTCCCACTGTGCTATATGCT | + |
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Preference number: 3 (lower is better) Translates to: PFWARPVSAQCL*GHLPSPTVLYA Trigger: AGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGGCAGACACAGGCCTGGCCCAGAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 72 bp | TGCCTCTCATGCAGACACGGCACTGGGCAGAGAGGGTaGCCAACATGTCGCTACTCATCAGAACTGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: CLSCRHGTGQRG*PTCRYSSELPP Trigger: CGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACCCTCTCTGCCCAGTGCCGTGTCTGCATGAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 72 bp | CCCCTGACAAGCGCAGCGCGTAGTGGTCAGCACATCTaGAAACCCCAGTCCTCAGTGGTCAAGTTCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: PLTSAARSGQHI*KPQSSVVKFTK Trigger: CTTGGTGAACTTGACCACTGAGGACTGGGGTTTTCAGATGTGCTGACCACTACGCGCTGCGCTTGTCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 72 bp | CATGAAACCAGCCTGCCTCTCATGCAGACACGGCACTaGGCAGAGAGGGTGACCAACATGTCGCTACTCATC | + |
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Preference number: 3 (lower is better) Translates to: HETSLPLMQTRH*AERVTNMSLLI Trigger: GATGAGTAGCGACATGTTGGTCACCCTCTCTGCCCAGTGCCGTGTCTGCATGAGAGGCAGGCTGGTTTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CAA 90 bp | CCCGTGGTCTCAGTACCCGGGAGTGGAGGCTGGGGGATCATTAAGTTCAGCCTCGCTATGAGCCGCCAGTaGAAGAAACATTTACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: PVVSVPGSGGWGIIKFSLAMSRQ*KKHLQS Trigger: GGACTGTAAATGTTTCTTCAACTGGCGGCTCATAGC...GAGGCTGAACTTAATGATCCCCCAGCCTCCACTCCCGGGTACTGAGACCACGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 72 bp | CTAAGTCTGCAGAGATGTCCATCCACCCATAGCCCCTaGCAAGCGCAGCGCGTAGTGGTCAGCACATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LSLQRCPSTHSP*QAQRVVVSTSE Trigger: TTCAGATGTGCTGACCACTACGCGCTGCGCTTGTCAGGGGCTATGGGTGGATGGACATCTCTGCAGACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 72 bp | CCCAGTGCCTCTGCGGACATCTCCCATCTCCCACTGTaGTATATGCTAAGTCTGCAGAGATGTCCATCCACC | + |
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Preference number: 3 (lower is better) Translates to: PSASADISHLPL*YMLSLQRCPST Trigger: GGTGGATGGACATCTCTGCAGACTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 72 bp | CATACTACACACAAGCAGCTCGGAGACAGCAAGAATTaGTCTTCAGACAGCGCCCTCCTTAGTGAAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: HTTHKQLGDSKN*SSDSALLSESS Trigger: GGAGCTTTCACTAAGGAGGGCGCTGTCTGAAGAGCAATTCTTGCTGTCTCCGAGCTGCTTGTGTGTAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 72 bp | GTAGTGGTCAGCACATCTGAAAACCCCAGTCCTCAGTaGTCAAGTTCACCAAGTATTGAACGGATGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: VVVSTSENPSPQ*SSSPSIERMLG Trigger: TCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGTTTTCAGATGTGCTGACCACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR GCA 72 bp | GTCCTCAGTGGTCAAGTTCACCAAGTATTGAACGGATaGTGGGAAACAGGAGGAAGAATGAGCAGCGATTTC | + |
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Preference number: 3 (lower is better) Translates to: VLSGQVHQVLNG*WETGGRMSSDF Trigger: GAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATCGGAGACAGCAAGAATaGCTCTTCAGACAGCGCCCT | + |
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Preference number: 3 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDRRQQE*LFRQRP Trigger: AGGGCGCTGTCTGAAGAGCAATTCTTGCTGTCTCCG...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR-3UTR CAA 90 bp | ACACAGTCAACCACACCTGCACGAAGGGTTCATTTCAGCCTAGGACTTTTCAAACACATATGCCCATGGTaGTTGATAATGGTCCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: TQSTTPARRVHFSLGLFKHICPW*LIMVPR Trigger: CCTTGGGACCATTATCAACAACCATGGGCATATGTG...TTTGAAAAGTCCTAGGCTGAAATGAACCCTTCGTGCAGGTGTGGTTGACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR TCA 72 bp | ACACAAATAAAGCAAAAGCATCCTGGTGGACAGGTCTaGTGTACCAAGCCCTGCATCCTTGGGGATGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TQIKQKHPGGQV*CTKPCILGDGF Trigger: AAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGTCCACCAGGATGCTTTTGCTTTATTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 72 bp | ATGGAAACTGGAGAGACACAGGCAATTGGTAAGTTCTaGAAAGGACAGCTCATGGTCCTTGCACACAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: METGETQAIGKF*KGQLMVLAHKA Trigger: TGCTTTGTGTGCAAGGACCATGAGCTGTCCTTTCCAGAACTTACCAATTGCCTGTGTCTCTCCAGTTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 72 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATaGTTTTGTATGTTCTTGGTTGTTCTGAGCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: TGLMYQALHPWG*FCMFLVVLSTH Trigger: ATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CCA 72 bp | TTCCTAAACCCTGTGCCTATGAGACACATATGCCCATaGTTGTTGATAATGGTCCCAAGGAGAGGGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: FLNPVPMRHICP*LLIMVPRRGRM Trigger: CATTCTCCCTCTCCTTGGGACCATTATCAACAACCATGGGCATATGTGTCTCATAGGCACAGGGTTTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR CCA 72 bp | CTCAGTGGTCAAGTTCACCAAGTATTGAACGGATGCTaGGAAACAGGAGGAAGAATGAGCAGCGATTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSGQVHQVLNGC*ETGGRMSSDFQ Trigger: TTGGAAATCGCTGCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR CCA 72 bp | CAGTTGAAGAAACATTTACAGTCCACTTTGCAACAATaGTATGAGAGGGGGCAGACTGAGTCTGTTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLKKHLQSTLQQ*YERGQTESVHS Trigger: GCTGTGAACAGACTCAGTCTGCCCCCTCTCATACCATTGTTGCAAAGTGGACTGTAAATGTTTCTTCAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR TCA 72 bp | TTTGCATCTTTTCTGGCCTTCAGTAGGAGGAACCATTaGAAACAAAACACAGTCAACCACACCTGCACGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FASFLAFSRRNH*KQNTVNHTCTK Trigger: CTTCGTGCAGGTGTGGTTGACTGTGTTTTGTTTTCAATGGTTCCTCCTACTGAAGGCCAGAAAAGATGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATATGGCTGGAACCACTCTaGCTCAGTGCTCCGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GDQHVATHQNCHRLVQNIWLEPL*LSAPGP Trigger: CGGGCCCGGAGCACTGAGTCAGAGTGGTTCCAGCCA...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTCTGCGGACATCTCCCATCTCCCACTGTGCTATATGCTAAGTCTGCAGTCTGCTGCTGTGCTGTaGCCTGCTGGTACCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SASADISHLPLCYMLSLQSAAVL*PAGTQP Trigger: AGGCTGGGTACCAGCAGGGCACAGCACAGCAGCAGA...CTGCAGACTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATAGGATGGTCTGCTGAGTaGCCTCCCCTTTGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDQHVATHQNCHRLVQNIGWSAE*PPLCLS Trigger: CGAGAGGCAAAGGGGAGGTCACTCAGCAGACCATCC...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATACGGCGGTCTTGCCCTTaGTCTGGTAGTCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GDQHVATHQNCHRLVQNIRRSCP*SGSPGC Trigger: GCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCG...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTCACGATGCCCACACTCTCACCGACTGTCATTTGGAATAGTCATCGATCCTCTTGGCCCAGGTACTaGTGGGAAGAGCCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLTMPTLSPTVIWNSHRSSWPRY*WEEPCW Trigger: CCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAAGA...GGATCGATGACTATTCCAAATGACAGTCGGTGAGAGTGTGGGCATCGTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCGAGGTAGGCCCCGAGTaGCTGTACCCAGGGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLRFGHTQILEMTPRAKAEVGPE*LYPGPV Trigger: TACTGGCCCTGGGTACAGCCACTCGGGGCCTACCTC...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCGGCTCTGCGGAGCCCTaGCTGTGGCTGTACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLRFGHTQILEMTPRAKAGSAEP*LWLYCS Trigger: CGAACAGTACAGCCACAGCCAGGGCTCCGCAGAGCC...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGAGGGGGCAGACTGAGTCTGTTCACAGCAGCATGGACCATGATGTCTCTTTGGGACGTGGCTGCCTaGTGGTGCATCATGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MRGGRLSLFTAAWTMMSLWDVAA*WCIMET Trigger: AGTCTCCATGATGCACCAGCAGGCAGCCACGTCCCA...AAGAGACATCATGGTCCATGCTGCTGTGAACAGACTCAGTCTGCCCCCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTAGTAGGTCTGCTGCTGTaGTGTGCCCTGCTGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: RFGHTQILEMTPRAKAILVGLLL*CALLVP Trigger: GGGTACCAGCAGGGCACAGCACAGCAGCAGACCTAC...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCGACGTGGCTGCCTGCTaGTGCATCATGGAGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRFGHTQILEMTPRAKADVAAC*CIMETG Trigger: CCCAGTCTCCATGATGCACCAGCAGGCAGCCACGTC...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATAAGTACTGTTGACTCATaGGCTCTGCGGAGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDQHVATHQNCHRLVQNISTVDS*ALRSPG Trigger: GCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACT...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATAACCATGGCCACTGCCTaGCAAGCTCATGGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GDQHVATHQNCHRLVQNITMATA*QAHGGC Trigger: ACAACCTCCATGAGCTTGTCAGGCAGTGGCCATGGT...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTCACGATGCCCACACTCTCACCGACTGTCATTTGGAATAGTCATCGATCCTCTGGTAGTCCAGGATaGACTGGATCAGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLTMPTLSPTVIWNSHRSSGSPG*TGSGGG Trigger: ACCACCACCTGATCCAGTGCATCCTGGACTACCAGA...GGATCGATGACTATTCCAAATGACAGTCGGTGAGAGTGTGGGCATCGTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTATTCCGGTGCAGGATCTaGTGGTACTGCGTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RFGHTQILEMTPRAKAILFRCRI*WYCVHS Trigger: CGAGTGCACGCAGTACCAGCAGATCCTGCACCGGAA...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGTGGCCCAGGTACTGCTaGGAAGAGCCTTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLWPRYC*EEPCWE Trigger: CTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCA...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTATTCTGGATGGTCTGCTaGGTGACCTCCCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFGHTQILEMTPRAKAILFWMVC*VTSPLP Trigger: AGGCAAAGGGGAGGTCACTCAGCAGACCATCCAGAA...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGTGCACTCGGCGGTCTTaGCCTTGCTCTGGTAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLCTRRS*PCSGSP Trigger: TGGACTACCAGAGCAAGGGCAAGACCGCCGAGTGCA...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGAGGTTGTGGGCAGTGTaGTCTGAGCCGTCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLRLWAV*SEPSAA Trigger: TGCAGCAGACGGCTCAGAGCACACTGCCCACAACCT...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCGTGGCTGCCTGCTGGTaGATCATGGAGACTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLRFGHTQILEMTPRAKAVAACW*IMETGL Trigger: TAACCCAGTCTCCATGATGCACCAGCAGGCAGCCAC...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | CTCTATAAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCGTAGTGGGACGTGGCTaGCTGCTGGTGCATCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYKLRFGHTQILEMTPRAVVGRG*LLVHHG Trigger: TCCATGATGCACCAGCAGGCAGCCACGTCCCACTAC...GGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTTATAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGGGCGCCATGGGCCGCTaGCCCATCATGCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLGAMGR*PIMLPP Trigger: AGGAGGCAGCATGATGGGGCAGCGGCCCATGGCGCC...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGGAGCCGTCTGCTGCATaGACACGTGGTTTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLEPSAA*TRGLDR Trigger: ACGGTCCAAACCACGTGTCCATGCAGCAGACGGCTC...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGAGCTCATGGAGGTTGTaGGCAGTGTGCTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLSSWRL*AVCSEP Trigger: CGGCTCAGAGCACACTGCCCACAACCTCCATGAGCT...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGTCAACCACACCTGCACGAAGGGTTCATTTCAGCCTAGGACTTTTCAAACCAGGGCCAGTACCATaGCCACTGCCTGACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQSTTPARRVHFSLGLFKPGPVP*PLPDKL Trigger: GAGCTTGTCAGGCAGTGGCCATGGTACTGGCCCTGG...TTTGAAAAGTCCTAGGCTGAAATGAACCCTTCGTGCAGGTGTGGTTGACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATGTGGGCAGTGTGCTCTaGGCCGTCTGCTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDVGSVL*AVCCMD Trigger: GTCCATGCAGCAGACGGCTCAGAGCACACTGCCCAC...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATGGACCGTTACCGATCTaGCCCTGCATGAGGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDGPLPI*PCMREA Trigger: CGCCTCCCTCATGCAGGGCCAGATCGGTAACGGTCC...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGGTCTGTAGGGCGCCATaGGCCGCTGCCCCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLVCRAP*AAAPSC Trigger: GCATGATGGGGCAGCGGCCCATGGCGCCCTACAGAC...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCATACTACGTAGTAGTGCTGTGTaGGATCCTCAAAGGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RFGHTQILEMTPRAKAILRSSAV*DPQRSG Trigger: ACCGCTCCTTTGAGGATCCCACACAGCACTACTACG...TAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCAAAGCCGATTGGAGTCTGCTATaGTGGCTAGGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRFGHTQILEMTPRAKADWSLL*WLGRPG Trigger: ACCTGGTCTACCTAGCCACCATAGCAGACTCCAATC...GGCTTTGGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGAGGGACTGCATGTTCTaGTTGGAGTCTGCTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLRDCMF*LESAMV Trigger: CACCATAGCAGACTCCAATCAGAACATGCAGTCCCT...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATTACCCAGCCTGCTGCTaGCTGTACTGGGAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDYPACC*LYWEFP Trigger: GGGAAACTCCCAGTACAGTCAGCAGCAGGCTGGGTA...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGCACTGGATCAGGTGGTaGTTCTCATCCAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLHWIRW*FSSSIF Trigger: GAAGATGCTGGATGAGAACCACCACCTGATCCAGTG...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGATGCACTGGATCAGGTaGTGGTTCTCATCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TGLMYQALHPWGWFCMFLMHWIR*WFSSSI Trigger: GATGCTGGATGAGAACCACCACCTGATCCAGTGCAT...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGGGTGCAGGCCCTGGCTaGAACCACTCTGACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLGAGPG*NHSDSV Trigger: CACTGAGTCAGAGTGGTTCCAGCCAGGGCCTGCACC...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR CAA 72 bp | CTAAACCCTGTGCCTATGAGACACATATGCCCATGGTaGTTGATAATGGTCCCAAGGAGAGGGAGAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNPVPMRHICPW*LIMVPRRGRMS Trigger: GGACATTCTCCCTCTCCTTGGGACCATTATCAACAACCATGGGCATATGTGTCTCATAGGCACAGGGTTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR CAA 72 bp | AAAACCCCAGTCCTCAGTGGTCAAGTTCACCAAGTATaGAACGGATGCTGGGAAACAGGAGGAAGAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTPVLSGQVHQV*NGCWETGGRMS Trigger: GCTCATTCTTCCTCCTGTTTCCCAGCATCCGTTCAATACTTGGTGAACTTGACCACTGAGGACTGGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR TCA 90 bp | ATGGAAATGGAAAGTCTTCCTCTTTTTACAAGTTTGAACGGACACTCAGTCACTGCTTCCACCCTGTGCTaGGTTGTAGTGGGACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MEMESLPLFTSLNGHSVTASTLC*VVVGRG Trigger: GCCACGTCCCACTACAACTCAGCACAGGGTGGAAGC...AGTGACTGAGTGTCCGTTCAAACTTGTAAAAAGAGGAAGACTTTCCATTTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAAATGGAAAGTCTTCCTCTTTTTACAAGTTTGAACGGACACTCAGTCACTCCTCCTTGGCCACCCTaGCCCATCATGGCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MEMESLPLFTSLNGHSVTPPWPP*PIMAMG Trigger: ACCCATTGCCATGATGGGCCAGGGTGGCCAAGGAGG...AGTGACTGAGTGTCCGTTCAAACTTGTAAAAAGAGGAAGACTTTCCATTTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGATCATGCTGCCTCCTTaGCCACCCTGGCCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLIMLPP*PPWPIM Trigger: CATGATGGGCCAGGGTGGCCAAGGAGGCAGCATGAT...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGCAGTACCATGGCCACTaGCTGACAAGCTCATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLQYHGH*LTSSWR Trigger: CCTCCATGAGCTTGTCAGGCAGTGGCCATGGTACTG...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGTCAACCACACCTGCACGAAGGGTTCATTTCAGCCTAGGACTTTTCAAAGAGACTGGGTTAGACTaGATGTTGATGTTGGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQSTTPARRVHFSLGLFKETGLD*MLMLVR Trigger: TCGGACCAACATCAACATGCAGTCTAACCCAGTCTC...TTTGAAAAGTCCTAGGCTGAAATGAACCCTTCGTGCAGGTGTGGTTGACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGTAAGTAAATGGAGCTTGCACTGTAAGTTCCAGCAAGACTGTCAAGATGGTAGCTCTGCTGGTTaGGATACTGTTGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVSKWSLHCKFQQDCQDGSSAG*DTVAGS Trigger: ACTCCCAGCAACAGTATCCCAACCAGCAGAGCTACC...ATCTTGACAGTCTTGCTGGAACTTACAGTGCAAGCTCCATTTACTTACAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
||
| 3UTR CAA 72 bp | CAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTaGGTTGTTCTGAGCACTCATCTTCAAGGTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QALHPWGWFCMF*VVLSTHLQGCS Trigger: AGAACAACCTTGAAGATGAGTGCTCAGAACAACCAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 72 bp | GTTTCTGTAAAGTTAAAGCCGTCATGTAGTCAGCCCTaGCCTGTGTGTTTCCTAAACCCTGTGCCTATGAGA | + |
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Preference number: 4 (lower is better) Translates to: VSVKLKPSCSQP*PVCFLNPVPMR Trigger: TCTCATAGGCACAGGGTTTAGGAAACACACAGGCAAGGGCTGACTACATGACGGCTTTAACTTTACAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| 3UTR CAA 72 bp | CAATTGGTAAGTTCTGGAAAGGACAGCTCATGGTCCTaGCACACAAAGCACATCTTCCTTGTTATAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: QLVSSGKDSSWS*HTKHIFLVIVT Trigger: TGTCACTATAACAAGGAAGATGTGCTTTGTGTGCAAGGACCATGAGCTGTCCTTTCCAGAACTTACCAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CCA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGACTGCATGTTCTGATTaGAGTCTGCTATGGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SKTVKINSSKLHKGALLLTACSD*SLLWWL Trigger: TAGCCACCATAGCAGACTCCAATCAGAACATGCAGT...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 90 bp | GCTGCCCTGGGGGTGCAGGCCCTGGCTGGAACCACTCTGACTCAGTaGTCCGGGCCCGAGGTTCATGTTCTGTGTTGGAGGCGCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AALGVQALAGTTLTQ*SGPEVHVLCWRRGK Trigger: CTTCCCGCGCCTCCAACACAGAACATGAACCTCGGGCCCGGAGCACTGAGTCAGAGTGGTTCCAGCCAGGGCCTGCACCCCCAGGGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 90 bp | CTCTGCGAGGTAGGCCCCGAGTGGCTGTACCCAGGGCCAGTACCATaGCCACTGCCTGACAAGCTCATGGAGGTTGTGGGCAGTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LCEVGPEWLYPGPVP*PLPDKLMEVVGSVL Trigger: GAGCACACTGCCCACAACCTCCATGAGCTTGTCAGGCAGTGGCCATGGTACTGGCCCTGGGTACAGCCACTCGGGGCCTACCTCGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 90 bp | GGTGCAGGATCTGCTGGTACTGCGTGCACTCGGCGGTCTTGCCCTTaGTCTGGTAGTCCAGGATGCACTGGATCAGGTGGTGGTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: GAGSAGTACTRRSCP*SGSPGCTGSGGGSH Trigger: ATGAGAACCACCACCTGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCGAGTGCACGCAGTACCAGCAGATCCTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 90 bp | GTAGTCACCGTGGCCATCCGGGTAGTACTGTTGACTCATGGGCTCTaGGGAGCCCTGGCTGTGGCTGTACTGTTCGCTGTAGTACTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VVTVAIRVVLLTHGL*GALAVAVLFAVVLL Trigger: GAGGAGTACTACAGCGAACAGTACAGCCACAGCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACTACCCGGATGGCCACGGTGACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 90 bp | GCGCGGGAAGCAGGGACTGCATGTTCTGATTGGAGTCTGCTATGGTaGCTAGGTAGACCAGGTTCCGGTGCAGGATCTGCTGGTACTGCG | + |
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Preference number: 5 (lower is better) Translates to: AREAGTACSDWSLLW*LGRPGSGAGSAGTA Trigger: CGCAGTACCAGCAGATCCTGCACCGGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGCTTCCCGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 90 bp | GATAGGCGTAGTCACCGTGGCCATCCGGGTAGTACTGTTGACTCATaGGCTCTGCGGAGCCCTGGCTGTGGCTGTACTGTTCGCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: DRRSHRGHPGSTVDS*ALRSPGCGCTVRCS Trigger: ACTACAGCGAACAGTACAGCCACAGCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACTACCCGGATGGCCACGGTGACTACGCCTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 90 bp | ACTGCGTGCACTCGGCGGTCTTGCCCTTGCTCTGGTAGTCCAGGATaGACTGGATCAGGTGGTGGTTCTCATCCAGCATCTTCTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: TACTRRSCPCSGSPG*TGSGGGSHPASSGW Trigger: CCATCCAGAAGATGCTGGATGAGAACCACCACCTGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCGAGTGCACGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 90 bp | GAGGCGCGGGAAGCAGGGACTGCATGTTCTGATTGGAGTCTGCTATaGTGGCTAGGTAGACCAGGTTCCGGTGCAGGATCTGCTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: EAREAGTACSDWSLL*WLGRPGSGAGSAGT Trigger: AGTACCAGCAGATCCTGCACCGGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGCTTCCCGCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 90 bp | TGTTCTGTGTTGGAGGCGCGGGAAGCAGGGACTGCATGTTCTGATTaGAGTCTGCTATGGTGGCTAGGTAGACCAGGTTCCGGTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CSVLEAREAGTACSD*SLLWWLGRPGSGAG Trigger: TCCTGCACCGGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGCTTCCCGCGCCTCCAACACAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CAA 90 bp | GGTGACCAACATGTCGCTACTCATCAGAACTGCCACCGGCTTGTCCAGAACATACATCATGCTGCCTCCTaGGCCACCCTGGCCCATCAT | + |
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Preference number: 5 (lower is better) Translates to: GDQHVATHQNCHRLVQNIHHAAS*ATLAHH Trigger: ATGATGGGCCAGGGTGGCCAAGGAGGCAGCATGATG...TATGTTCTGGACAAGCCGGTGGCAGTTCTGATGAGTAGCGACATGTTGGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTCTGATGTACCAAGCCCTGCATCCTTGGGGATGGTTTTGTATGTTCTTGCTGCTGGGAAGAGCCTaGCTGGGAGGGTCTGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: TGLMYQALHPWGWFCMFLLLGRA*LGGSVG Trigger: CCCTACAGACCCTCCCAGCAAGGCTCTTCCCAGCAG...CAAGAACATACAAAACCATCCCCAAGGATGCAGGGCTTGGTACATCAGACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CAA 90 bp | CTCTATAAACTTAGGTTTGGGCACACTCAAATCCTAGAGATGACGCCAAGGGCCGCTGTAGTACTCCTCTaGGCCCAGGTACTGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LYKLRFGHTQILEMTPRAAVVLL*AQVLLG Trigger: TCCCAGCAGTACCTGGGCCAAGAGGAGTACTACAGC...GGCCCTTGGCGTCATCTCTAGGATTTGAGTGTGCCCAAACCTAAGTTTATAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CAA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGGTCCTTGCTGGTAGCTaGAGTACTGTGAGGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SKTVKINSSKLHKGALLLVLAGS*STVRGL Trigger: GAGCCCCCTCACAGTACTCAAGCTACCAGCAAGGAC...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS-3UTR CAA 90 bp | AGCAAGACTGTCAAGATTAATTCAAGCAAACTCCACAAAGGTGCCTTACTACTGATCCGGGTAGTACTGTaGACTCATGGGCTCTGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SKTVKINSSKLHKGALLLIRVVL*THGLCG Trigger: TCCGCAGAGCCCATGAGTCAACAGTACTACCCGGAT...CAGTAGTAAGGCACCTTTGTGGAGTTTGCTTGAATTAATCTTGACAGTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | GTCTGTAGGGCGCCATGGGCCGCTGCCCCATCATGCTaGCTCCTTGGCCACCCTGGCCCATCATGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VCRAPWAAAPSC*LLGHPGPSWQW Trigger: CCATTGCCATGATGGGCCAGGGTGGCCAAGGAGGCAGCATGATGGGGCAGCGGCCCATGGCGCCCTACAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | AGGGTCTGTAGGGCGCCATGGGCCGCTGCCCCATCATaGTGCCTCCTTGGCCACCCTGGCCCATCATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RVCRAPWAAAPS*CLLGHPGPSWQ Trigger: TTGCCATGATGGGCCAGGGTGGCCAAGGAGGCAGCATGATGGGGCAGCGGCCCATGGCGCCCTACAGACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS TCA 72 bp | GGTTCTCATCCAGCATCTTCTGGATGGTCTGCTGAGTaGCCTCCCCTTTGCCTCTCGGCCGCGCCGACGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSHPASSGWSAE*PPLCLSAAPTR Trigger: TCGCGTCGGCGCGGCCGAGAGGCAAAGGGGAGGTCACTCAGCAGACCATCCAGAAGATGCTGGATGAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | CCGAGTGGCTGTACCCAGGGCCAGTACCATGGCCACTaGCTGACAAGCTCATGGAGGTTGTGGGCAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PSGCTQGQYHGH*LTSSWRLWAVC Trigger: GCACACTGCCCACAACCTCCATGAGCTTGTCAGGCAGTGGCCATGGTACTGGCCCTGGGTACAGCCACTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS TCA 72 bp | TGGTGGTTCTCATCCAGCATCTTCTGGATGGTCTGCTaGGTGACCTCCCCTTTGCCTCTCGGCCGCGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: WWFSSSIFWMVC*VTSPLPLGRAD Trigger: GTCGGCGCGGCCGAGAGGCAAAGGGGAGGTCACTCAGCAGACCATCCAGAAGATGCTGGATGAGAACCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CAA 72 bp | ATAGGCGTAGTCACCGTGGCCATCCGGGTAGTACTGTaGACTCATGGGCTCTGCGGAGCCCTGGCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: IGVVTVAIRVVL*THGLCGALAVA Trigger: AGCCACAGCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACTACCCGGATGGCCACGGTGACTACGCCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CAA 90 bp | CGACTGCTGATAGGCGTAGTCACCGTGGCCATCCGGGTAGTACTGTaGACTCATGGGCTCTGCGGAGCCCTGGCTGTGGCTGTACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RLLIGVVTVAIRVVL*THGLCGALAVAVLF Trigger: GAACAGTACAGCCACAGCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACTACCCGGATGGCCACGGTGACTACGCCTATCAGCAGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | TCTGCTGGTACTGCGTGCACTCGGCGGTCTTGCCCTTaGTCTGGTAGTCCAGGATGCACTGGATCAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SAGTACTRRSCP*SGSPGCTGSGG Trigger: ACCACCTGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCGAGTGCACGCAGTACCAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | GCAGGATCTGCTGGTACTGCGTGCACTCGGCGGTCTTaGCCTTGCTCTGGTAGTCCAGGATGCACTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: AGSAGTACTRRS*PCSGSPGCTGS Trigger: TGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCGAGTGCACGCAGTACCAGCAGATCCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 72 bp | AGTCACCGTGGCCATCCGGGTAGTACTGTTGACTCATaGGCTCTGCGGAGCCCTGGCTGTGGCTGTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: SHRGHPGSTVDS*ALRSPGCGCTV Trigger: AACAGTACAGCCACAGCCAGGGCTCCGCAGAGCCCATGAGTCAACAGTACTACCCGGATGGCCACGGTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CAA 72 bp | CTGGCTGTGGCTGTACTGTTCGCTGTAGTACTCCTCTaGGCCCAGGTACTGCTGGGAAGAGCCTTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LAVAVLFAVVLL*AQVLLGRALLG Trigger: TCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAAGAGGAGTACTACAGCGAACAGTACAGCCACAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS GCA 72 bp | ACTCGGCGGTCTTGCCCTTGCTCTGGTAGTCCAGGATaGACTGGATCAGGTGGTGGTTCTCATCCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: TRRSCPCSGSPG*TGSGGGSHPAS Trigger: AGATGCTGGATGAGAACCACCACCTGATCCAGTGCATCCTGGACTACCAGAGCAAGGGCAAGACCGCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 72 bp | TTGGAGGCGCGGGAAGCAGGGACTGCATGTTCTGATTaGAGTCTGCTATGGTGGCTAGGTAGACCAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LEAREAGTACSD*SLLWWLGRPGS Trigger: GGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGCTTCCCGCGCCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 72 bp | GCAGGGACTGCATGTTCTGATTGGAGTCTGCTATGGTaGCTAGGTAGACCAGGTTCCGGTGCAGGATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGTACSDWSLLW*LGRPGSGAGSA Trigger: AGCAGATCCTGCACCGGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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| CDS CCA 72 bp | GAAGCAGGGACTGCATGTTCTGATTGGAGTCTGCTATaGTGGCTAGGTAGACCAGGTTCCGGTGCAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: EAGTACSDWSLL*WLGRPGSGAGS Trigger: AGATCCTGCACCGGAACCTGGTCTACCTAGCCACCATAGCAGACTCCAATCAGAACATGCAGTCCCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041126.9 |
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