Pregenerated sensors for SS18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037013Ensembl transcript IDs: ENSMUST00000040924.9, ENSMUST00000040964.13, ENSMUST00000092041.11, ENSMUST00000234120.2, ENSMUST00000234224.2, ENSMUST00000234524.2, ENSMUST00000235011.2
Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGTCCCGGGTACTGCTGCTGCTGGGGTGGGTATCCTTGCTGTaGAGGTGGTCCCTGGTAAGCGTCTTGCTGTTGGCCATACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLSRVLLLLGWVSLL*RWSLVSVLLLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR GCA 90 bp | TTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATTGTACTGCTGAGAAGGAGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LAHQPHGRLLSLVML*PSRWHIVLLRRRLL Trigger: CAGCAGCCTCCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CCA 90 bp | CCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTGCCCCTCCAGGTaGCATATTGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGG | + |
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Preference number: 1 (lower is better) Translates to: PHGRLLSLVMLCPSR*HIVLLRRRLLVHHR Trigger: CCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR GCA 90 bp | CCATTGGCTGCCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATaGTCTGGGATGACGGCACAGAATGGTTGTAACCTCCCATGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PLAAPDSLSSGSARA*SGMTAQNGCNLPWS Trigger: GCTCCATGGGAGGTTACAACCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGCAGCCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR TCA 90 bp | CCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATGCTCTGGGATaGCGGCACAGAATGGTTGTAACCTCCCATGGAGCCATGGCTACT | + |
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Preference number: 1 (lower is better) Translates to: PLTHCHLVLHGHALG*RHRMVVTSHGAMAT Trigger: AGTAGCCATGGCTCCATGGGAGGTTACAACCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR GCA 90 bp | GTAGCTGCACGTGGGGCACATGTCCCCACTCTCTGCAGGTCACTGTaGCACCAGGCAAAGCTGCAGAATGACGCTAATAGTCACACACAA | + |
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Preference number: 1 (lower is better) Translates to: VAARGAHVPTLCRSL*HQAKLQNDANSHTQ Trigger: TTGTGTGTGACTATTAGCGTCATTCTGCAGCTTTGCCTGGTGGCACAGTGACCTGCAGAGAGTGGGGACATGTGCCCCACGTGCAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
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| 3UTR CCA 90 bp | ATACTGCTGACCTTGACCCTGAGGATAATTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACCATAGCTCTGCTGCTGCCCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: ILLTLTLRIIRILRT*TALRRTIALLLPWV Trigger: TACCCAGGGCAGCAGCAGAGCTATGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGTCAGCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR TCA 90 bp | GAAGCTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTaGCAGTCCATTTGCAGCACAGTTCTGAAACCGCTGCAAACTCCT | + |
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Preference number: 1 (lower is better) Translates to: EAPRTHTQLLTPFRL*QSICSTVLKPLQTP Trigger: AGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR GCA 90 bp | CACATGTCCCCACTCTCTGCAGGTCACTGTGCCACCAGGCAAAGCTaGAGAATGACGCTAATAGTCACACACAATGGCACCAGCACACTT | + |
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Preference number: 1 (lower is better) Translates to: HMSPLSAGHCATRQS*RMTLIVTHNGTSTL Trigger: AAGTGTGCTGGTGCCATTGTGTGTGACTATTAGCGTCATTCTGCAGCTTTGCCTGGTGGCACAGTGACCTGCAGAGAGTGGGGACATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
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| 3UTR CCA 90 bp | CGGGCATGCTCTGGGATGACGGCACAGAATGGTTGTAACCTCCCATaGAGCCATGGCTACTTGAAGGCATATTCATGGAGCTGTTTGTCA | + |
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Preference number: 1 (lower is better) Translates to: RACSGMTAQNGCNLP*SHGYLKAYSWSCLS Trigger: TGACAAACAGCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCATGGGAGGTTACAACCATTCTGTGCCGTCATCCCAGAGCATGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CCA 90 bp | ATTTGGTTGCATATTCATGTTTGGTCTGGGACCATAGTTTCCCATTaGCTGCCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: IWLHIHVWSGTIVSH*LPLTHCHLVLHGHA Trigger: AGCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CCA 90 bp | GGTGCATCATCGGCCCTTGATTTGGTTGCATATTCATGTTTGGTCTaGGACCATAGTTTCCCATTGGCTGCCCCTGACTCATTGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: GASSALDLVAYSCLV*DHSFPLAAPDSLSS Trigger: AGATGACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAATCAAGGGCCGATGATGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR TCA 90 bp | TGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTCACGTCAATGCATTTTCTGTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: CSHLSGCDSPFAAQF*NRCKLLTSMHFLSN Trigger: ATTGGACAGAAAATGCATTGACGTGAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR CCA 90 bp | GTAATCATTATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATGACTGTATTGGTCCCCATAATAGTC | + |
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Preference number: 1 (lower is better) Translates to: VIIMTIRVILLVHAF*RTLSTMTVLVPIIV Trigger: GACTATTATGGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR TCA 90 bp | ACTGAACAGTTAATTCTAATTAACGTGGGCATGGCAAGAGAATATTaGTCAAGTCCTAGAATGCAAATACCGTCTACTCGTACCGGACTA | + |
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Preference number: 1 (lower is better) Translates to: TEQLILINVGMAREY*SSPRMQIPSTRTGL Trigger: TAGTCCGGTACGAGTAGACGGTATTTGCATTCTAGGACTTGATCAATATTCTCTTGCCATGCCCACGTTAATTAGAATTAACTGTTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
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| 3UTR GCA 90 bp | ACTTTTACGAAACAGGACCGTTATAAAACAATTAAACCTTGCAAATaGACCAGTCTCCAGGAAGACAGTCCTGGAGGAAATTCTGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: TFTKQDRYKTIKPCK*TSLQEDSPGGNSAY Trigger: ATAAGCAGAATTTCCTCCAGGACTGTCTTCCTGGAGACTGGTGCATTTGCAAGGTTTAATTGTTTTATAACGGTCCTGTTTCGTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCCATCATGTGACTGCCTTGGTTAACTTGGCCCATCAGCCCCATGGGCGCGTTCTGCATGTGTGGTaGAGGAGGGCCCCCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: LAHHVTALVNLAHQPHGRVLHVW*RRAPTH Trigger: GTGGGTGGGGGCCCTCCTGCACCACACATGCAGAAC...GCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTGCCCCTCTGCACGGGCATGCTCTaGGATGACGGCACAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: LGPSAPWAPAVLGNAVPLCTGML*DDGTEW Trigger: CCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCA...GAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTGCCCCTCAGCTGTTTGTCATGCTaGGCTGACTGGGTCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LGPSAPWAPAVLGNAVPLSCLSC*ADWVQV Trigger: GACCTGGACCCAGTCAGCTCAGCATGACAAACAGCT...GAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTGCCCCTCGGGCATGCTCTGGGATaGCGGCACAGAATGGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LGPSAPWAPAVLGNAVPLGHALG*RHRMVV Trigger: TACAACCATTCTGTGCCGTCATCCCAGAGCATGCCC...GAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | GGGAGGCATCTGTCGCTGGCCCATCATGTGACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRHLSLAHHVTALVN*AHQPHGRLLSLVML Trigger: CAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCGACAGATGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | AGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCATGTGACTGCCTaGGTTAACTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: RSVGRHLSLAHHVTA*VNLAHQPHGRLLSL Trigger: CAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCGACAGATGCCTCCCTACAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | GTATCCCTGCTGTCCCGGGTACTGCTGCTGCTGGGGTGGGTATCCTaGCTGTGGAGGTGGTCCCTGGTAAGCGTCTTGCTGTTGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: VSLLSRVLLLLGWVS*LWRWSLVSVLLLAI Trigger: TATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCAGGGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAACACCTTTCAGGCTGTaGCAGTCCATTTGCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: VVGFCLPSPVFRAPQHRATPFRL*QSICST Trigger: TGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGT...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCCATCATGTGACTGCCTTGGTTAACTTGGCCCATCAGCCCCATGGGCGCGGCATATTGTACTGCTaGGAAGGAGGCTGCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LAHHVTALVNLAHQPHGRGILYC*EGGCWC Trigger: GCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCC...GCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | GCCTTGGTTAACTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCCAGGTGGCATATTGTACTGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALVNLAHQPHGRLLS*VMLCPSRWHIVLLR Trigger: TCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCCTGTTGCGGAGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCATGTGTTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: WALLRRSVGRHLSLAHHVFAAQF*NRCKLL Trigger: GAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAA...CACATGATGGGCCAGCGACAGATGCCTCCCTACAGACCTCCGCAACAGGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTGCTGTCCCGGGTACTGCTGCTGCTGGGGTGGGTATCCTTGCTGTGGAGAGTGCTGTGACAACGTaGCTGCTAATAGGTACTGGC | + |
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Preference number: 2 (lower is better) Translates to: IPAVPGTAAAGVGILAVESAVTT*LLIGTG Trigger: GCCAGTACCTATTAGCAGGCACGTTGTCACAGCACT...CTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGCCCCTCCAGGTGGCATATTGTACTGCTGAGAAGGAGGCTGCTGGTGCACCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AVPLQVAYCTAEKEAAGAPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...TGCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCCAAAAACCTAGCTaGAATGGAAGGAGTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: VVGFCLPSPVFRAPQHRASQKPS*NGRSLP Trigger: GGGAAGACTCCTTCCATTCCAGCTAGGTTTTTGGGA...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR-3UTR CCA 90 bp | TGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCACTGGTTCTGCATGTGTaGTGCAGGAGGGCCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: CTAEKEAAGASSALDLVALVLHV*CRRAPT Trigger: GGTGGGGGCCCTCCTGCACCACACATGCAGAACCAG...TGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | GGGTGGTCCTGGCTGTGTTGGTCTATAGCCCCCATACTGCTGACCTaGACCCTGAGGATAATTAGGATACTGAGGACCTGGACCGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GWSWLCWSIAPILLT*TLRIIRILRTWTAL Trigger: CAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGGGGCTATAGACCAACACAGCCAGGACCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | TGTTTGGTCTGGGACCATAGTTTCCCATTGGCTGCCCCTGACTCATaGTCATCTGGTTCTGCACGGGCATGCTCTGGGATGACGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: CLVWDHSFPLAAPDS*SSGSARACSGMTAQ Trigger: CTGTGCCGTCATCCCAGAGCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCCTGCTAATAGGTACTaGCTATTGGAATGTAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GGLLPPLACLQSTTAPSIPANRY*LLECKD Trigger: GTCCTTACATTCCAATAGCCAGTACCTATTAGCAGG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTGCTGGGGTGGGTATCCTTGCTGTGGAGGTGGTCCCTGGTAAGCGTTCCCAAAAACCTAGCTaGAATGGAAGGAGTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: TAAAGVGILAVEVVPGKRSQKPS*NGRSLP Trigger: GGGAAGACTCCTTCCATTCCAGCTAGGTTTTTGGGA...ACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTACAGCGGGCCTGTGGTaGGCTTCTGCCTCCCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPTAGLW*ASASPR Trigger: GCGAGGGGAGGCAGAAGCCCACCACAGGCCCGCTGT...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGTTAACTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: ALVNLAHQPHGRLLSLVMIWPFI*FCMCGA Trigger: TGCACCACACATGCAGAACCAGATGAACGGCCAGAT...CATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR CAA 90 bp | CTGGGGTGGGTATCCTTGCTGTGGAGGTGGTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGAGTTTCCTCCTTCGTAGTAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGWVSLLWRWSLVSV*LLAILGVSSFVVML Trigger: CAACATTACTACGAAGGAGGAAACTCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCACCCATTGGCTGCCCCTaGCTCATTGTCATCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CTAEKEAAGASSALDLVAPIGCP*LIVIWF Trigger: GAACCAGATGACAATGAGTCAGGGGCAGCCAATGGG...TGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCAACTCCTCACGTCAATaGATTTTCTGTCCAATGTTG | + |
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Preference number: 2 (lower is better) Translates to: GGLLPPLACLQSTTAPSINSSRQ*IFCPML Trigger: CAACATTGGACAGAAAATGCATTGACGTGAGGAGTT...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAGTTCTGCATGTGTGGTaGAGGAGGGCCCCCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVVLHVW*RRAPTH Trigger: GTGGGTGGGGGCCCTCCTGCACCACACATGCAGAAC...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR GCA 90 bp | TGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCACCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: CTAEKEAAGASSALDLVAPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...TGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACCCGGGTACTGCTGCTaGTGGGGTGGGTATCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVPGYCC*WGGYPC Trigger: GCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCGTTCATCTGGTTCTGCATGTGTGGTGCAGGAGGGCCCCCACCCACCATCCTGCTAATAGGTACTaGCTATTGGAATGTAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LAVHLVLHVWCRRAPTHHPANRY*LLECKD Trigger: GTCCTTACATTCCAATAGCCAGTACCTATTAGCAGG...ATGGTGGGTGGGGGCCCTCCTGCACCACACATGCAGAACCAGATGAACGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFFAAQF*NRCKLL Trigger: GAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTAGTGCTGTGACAACGTaGCTGCTAATAGGTACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFSAVTT*LLIGTG Trigger: GCCAGTACCTATTAGCAGGCACGTTGTCACAGCACT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACACAGCGGGCCTGTGGTaGGCTTCTGCCTCCCCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDTAGLW*ASASPR Trigger: GCGAGGGGAGGCAGAAGCCCACCACAGGCCCGCTGT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGACTAACAGCGGGCCTGTaGTGGGCTTCTGCCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRLTAGL*WASASP Trigger: AGGGGAGGCAGAAGCCCACCACAGGCCCGCTGTTAG...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCATATTCACCCTGCATTGGCATATaGTTAGGCCCAGGCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AEKEAAGASSALDLVAYSPCIGI*LGPGIW Trigger: CCAGATGCCTGGGCCTAACCATATGCCAATGCAGGG...TGAATATGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACGGCACAGAATGGTTGTAACCTCCCATGGAGCCATGGCTACTTGAAGGCATCCAGGTCCCTGCATTaGCATATGGTTAGGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: MTAQNGCNLPWSHGYLKASRSLH*HMVRPR Trigger: CCTGGGCCTAACCATATGCCAATGCAGGGACCTGGA...TGCCTTCAAGTAGCCATGGCTCCATGGGAGGTTACAACCATTCTGTGCCGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVRILRT*TALRRT Trigger: GGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCT...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCTCCTCCCTGCTCCATaGACCAATCATGGTAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFLLPAP*TNHGNV Trigger: TACATTACCATGATTGGTTCATGGAGCAGGGAGGAG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTTTCCCATTGGCTGCCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATACCCACCATTCCATCTaGAGGCATGTTGTGAGAGCG | + |
|
Preference number: 2 (lower is better) Translates to: IVSHWLPLTHCHLVLHGHTHHSI*RHVVRA Trigger: CGCTCTCACAACATGCCTTCAGATGGAATGGTGGGT...ATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGCAGCCAATGGGAAACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCAGGAGCCATGGCTACTTaGAGGCATATTCATGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CTAEKEAAGASSALDLVAGAMAT*RHIHGA Trigger: AGCTCCATGAATATGCCTTCAAGTAGCCATGGCTCC...TGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCAGTGCTGTGACAACGTaGCTGCTAATAGGTACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFSAVTT*LLIGTG Trigger: GCCAGTACCTATTAGCAGGCACGTTGTCACAGCACT...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCACCTCCCATGGAGCCATaGCTACTTGAAGGCATATTC | + |
|
Preference number: 2 (lower is better) Translates to: CTAEKEAAGASSALDLVAPPMEP*LLEGIF Trigger: GAATATGCCTTCAAGTAGCCATGGCTCCATGGGAGG...TGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CAA 90 bp | GCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCATATTCATGTTaGGTCTGGGACCATAGTTTCCCATTGGCTGCCCCTGACTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: AAGASSALDLVAYSC*VWDHSFPLAAPDSL Trigger: CAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAATCAAGGGCCGATGATGCACCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCTGCTAATAGGTACTGGCTATTGGAATGTAAGGACATTTTCACTGCTGGTTCTGAAGGCATGTTGTaGGAGCGGGGAGGGGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VPANRYWLLECKDIFTAGSEGML*ERGGGG Trigger: TCCACCCCCTCCCCGCTCTCACAACATGCCTTCAGA...ACCAGCAGTGAAAATGTCCTTACATTCCAATAGCCAGTACCTATTAGCAGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAAGCTGTTTGTCATGCTaGGCTGACTGGGTCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVSCLSC*ADWVQV Trigger: GACCTGGACCCAGTCAGCTCAGCATGACAAACAGCT...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTAGTGCTGTGACAACGTaGCTGCTAATAGGTACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: APQHRASTTLHINRGSDSSAVTT*LLIGTG Trigger: GCCAGTACCTATTAGCAGGCACGTTGTCACAGCACT...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGGCGCCCTTTGCTTGTaGCCAGTTAAGAAAGTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFGALCL*PVKKVK Trigger: TTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTATCCAGGTCCCTGCATTaGCATATGGTTAGGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVSRSLH*HMVRPR Trigger: CCTGGGCCTAACCATATGCCAATGCAGGGACCTGGA...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTTGCTGATAACCGTAATTGCACGGGCATGCTCTaGGATGACGGCACAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: HKAYRSLVQDTTVADNRNCTGML*DDGTEW Trigger: CCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCA...ATTACGGTTATCAGCAACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CAA 90 bp | GATTTGGTTGCATATTCATGTTTGGTCTGGGACCATAGTTTCCCATaGGCTGCCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATGC | + |
|
Preference number: 2 (lower is better) Translates to: DLVAYSCLVWDHSFP*AAPDSLSSGSARAC Trigger: GCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGTCCTCTCTGACGTGGTaGGAGCTCCCTGATTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKSSLTW*ELPDYK Trigger: CTTGTAATCAGGGAGCTCTCACCACGTCAGAGAGGA...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACATGCTGCCTCCTCTCTaGCGTGGTGAGAGCTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDMLPPL*RGESSL Trigger: CAGGGAGCTCTCACCACGTCAGAGAGGAGGCAGCAT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGGAACACACACCCAGCTaGTCACACCTTTCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKEHTPS*SHLSGC Trigger: ACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTC...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAGAACACACACCCAGCTaGTCACACCTTTCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVEHTPS*SHLSGC Trigger: ACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTC...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTTGCTGATAACCGTAATCTGGGTCCAGGTCCCTaGATTGGCATATGGTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HKAYRSLVQDTTVADNRNLGPGP*IGIWLG Trigger: GCCTAACCATATGCCAATGCAGGGACCTGGACCCAG...ATTACGGTTATCAGCAACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCCTGCTAATAGGTACTaGCTATTGGAATGTAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFPANRY*LLECKD Trigger: GTCCTTACATTCCAATAGCCAGTACCTATTAGCAGG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTGGAGGACCTTGTCCCCTGCATTGGCATATaGTTAGGCCCAGGCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HYDHQGNIAGSCLLEDLVPCIGI*LGPGIW Trigger: CCAGATGCCTGGGCCTAACCATATGCCAATGCAGGG...GACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTTCAGGATACGACGGTTGCTGATAACCGTAATCATTATGACCATCAGGGTCTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LVQDTTVADNRNHYDHQGLPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...ACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCTGAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CAA 90 bp | ATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTGGTCCCCATAATAGTCTTCCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTIRVILLVHAFWRT*STMTVLVPIIVFLA Trigger: GGCCAGGAAGACTATTATGGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTATTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVFAAQF*NRCKLL Trigger: GAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAA...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTCCTCTCTGACGTGGTaGGAGCTCCCTGATTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPSSLTW*ELPDYK Trigger: CTTGTAATCAGGGAGCTCTCACCACGTCAGAGAGGA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGTGAGGAATCCTCATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTTGGAGCCATGGCTACTTaGAGGCATATTCATGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVRNPHKAYRSLVQDTTVGAMAT*RHIHGA Trigger: AGCTCCATGAATATGCCTTCAAGTAGCCATGGCTCC...AACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATGAGGATTCCTCACAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGAGTGCTGTGACAACGTaGCTGCTAATAGGTACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKSAVTT*LLIGTG Trigger: GCCAGTACCTATTAGCAGGCACGTTGTCACAGCACT...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTAACTCCTCACGTCAATaGATTTTCTGTCCAATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFNSSRQ*IFCPML Trigger: CAACATTGGACAGAAAATGCATTGACGTGAGGAGTT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGAACACACACCCAGCTaGTCACACCTTTCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPEHTPS*SHLSGC Trigger: ACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCCTGCTAATAGGTACTaGCTATTGGAATGTAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFPANRY*LLECKD Trigger: GTCCTTACATTCCAATAGCCAGTACCTATTAGCAGG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPFAAQF*NRCKLL Trigger: GAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCCAAAGTTCACAGATaGAACATAATTATTGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LREHTPSCSHLSGCDSPFAKVHR*NIIIAL Trigger: CAAGGCAATAATTATGTTGCATCTGTGAACTTTGGC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGTCCCAAAAACCTAGCTaGAATGGAAGGAGTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKSQKPS*NGRSLP Trigger: GGGAAGACTCCTTCCATTCCAGCTAGGTTTTTGGGA...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGGCTTTCAGTGCGAATaGGAAATGGCCATCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPGFQCE*EMAIKA Trigger: TGCTTTGATGGCCATTTCTCATTCGCACTGAAAGCC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGAACACACACCCAGCTaGTCACACCTTTCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDEHTPS*SHLSGC Trigger: ACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTCCCAAAAACCTAGCTaGAATGGAAGGAGTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPSQKPS*NGRSLP Trigger: GGGAAGACTCCTTCCATTCCAGCTAGGTTTTTGGGA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDFAAQF*NRCKLL Trigger: GAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACACACCTTTCAGGCTGTaGCAGTCCATTTGCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDTPFRL*QSICST Trigger: TGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGATCACCGGTTCACACTTaGTGCCTATTTTCTACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRSPVHT*CLFSTV Trigger: GACAGTAGAAAATAGGCATCAAGTGTGAACCGGTGA...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGAACACACACCCAGCTaGTCACACCTTTCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLITRQGKNIPLPPFLLLEHTPS*SHLSGC Trigger: ACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCCTGCTAATAGGTACTaGCTATTGGAATGTAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKPANRY*LLECKD Trigger: GTCCTTACATTCCAATAGCCAGTACCTATTAGCAGG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGATACGACGGTTGCTGATAACCGTAATCATTATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATG | + |
|
Preference number: 2 (lower is better) Translates to: RIRRLLITVIIMTIRVILLVHAF*RTLSTM Trigger: CATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAG...CAATATTACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CAA 90 bp | GGAATCCTCATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTaGCTGATAACCGTAATCATTATGACCATCAGGGTAATATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GILIRPIVALFRIRR*LITVIIMTIRVILL Trigger: CAGCAATATTACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATGAGGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGATACGACGGTTGCTGATAACCGTAATCATTATGACCATCAGGGTAATATTGACACCTTTCAGGCTGTaGCAGTCCATTTGCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: RIRRLLITVIIMTIRVILTPFRL*QSICST Trigger: TGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGT...CAATATTACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCTCCTCCCTGCTCCATaGACCAATCATGGTAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDLLPAP*TNHGNV Trigger: TACATTACCATGATTGGTTCATGGAGCAGGGAGGAG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGGCTTTCAGTGCGAATaGGAAATGGCCATCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDGFQCE*EMAIKA Trigger: TGCTTTGATGGCCATTTCTCATTCGCACTGAAAGCC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGATTCTACTGTCCAAGTTaGAGAACACCCTATACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRFYCPS*RTPYTL Trigger: CAGAGTATAGGGTGTTCTTCAACTTGGACAGTAGAA...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTGAGGAATCCTCATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTTAACTCCTCACGTCAATaGATTTTCTGTCCAATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VVRNPHKAYRSLVQDTTVNSSRQ*IFCPML Trigger: CAACATTGGACAGAAAATGCATTGACGTGAGGAGTT...AACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATGAGGATTCCTCACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCCTTTTACACAAACCTaGCAAAGTTCACAGATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KAPFACAQLRKLKHKRVKPFTQT*QSSQMQ Trigger: TTGCATCTGTGAACTTTGGCAGGTTTGTGTAAAAGG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATCCCAAAAACCTAGCTaGAATGGAAGGAGTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ANSSRQCIFCPMLPSRVESQKPS*NGRSLP Trigger: GGGAAGACTCCTTCCATTCCAGCTAGGTTTTTGGGA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTATTGCATATTCATGTTTaGTCTGGGACCATAGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLHIHV*SGTIVS Trigger: GGAAACTATGGTCCCAGACCAAACATGAATATGCAA...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTAACTCCTCACGTCAATaGATTTTCTGTCCAATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPNSSRQ*IFCPML Trigger: CAACATTGGACAGAAAATGCATTGACGTGAGGAGTT...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGACCTTTTACACAAACCTaGCAAAGTTCACAGATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRPFTQT*QSSQMQ Trigger: TTGCATCTGTGAACTTTGGCAGGTTTGTGTAAAAGG...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACTCCTTTTCTGTTATTaGTGTTTTAAGAGAGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLLFCY*CFKRGF Trigger: GAAGCCTCTCTTAAAACAGCAATAACAGAAAAGGAG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTTCAGTCATATTCCCTaGATGCAGACAACTGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDFSHIP*MQTTVR Trigger: CCTCACAGTTGTCTGCATCCAGGGAATATGACTGAA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACTCCTCTCTGACGTGGTaGGAGCTCCCTGATTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDSSLTW*ELPDYK Trigger: CTTGTAATCAGGGAGCTCTCACCACGTCAGAGAGGA...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGAGCCAAAGTTCACAGATaGAACATAATTATTGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRAKVHR*NIIIAL Trigger: CAAGGCAATAATTATGTTGCATCTGTGAACTTTGGC...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGATACACTTTGCTTCTTTaGATTTATGGCACTCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TGLETQSAVSRQNSKSQRYTLLL*IYGTPS Trigger: AGAAGGAGTGCCATAAATGCAAAGAAGCAAAGTGTA...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCCTTTTACACAAACCTaGCAAAGTTCACAGATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDPFTQT*QSSQMQ Trigger: TTGCATCTGTGAACTTTGGCAGGTTTGTGTAAAAGG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACAGTGCGAATGAGAAATaGCCATCAAAGCATTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDSANEK*PSKHFP Trigger: AGGAAAATGCTTTGATGGCCATTTCTCATTCGCACT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCTGATTACAGTATGTTaGCAACAGTACACTTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDLITVC*QQYTLL Trigger: AAGCAAAGTGTACTGTTGTCAACATACTGTAATCAG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGCCTTTTACACAAACCTaGCAAAGTTCACAGATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLITRQGKNIPLPPFLLLPFTQT*QSSQMQ Trigger: TTGCATCTGTGAACTTTGGCAGGTTTGTGTAAAAGG...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTACACTTTGCTTCTTTaGATTTATGGCACTCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDYTLLL*IYGTPS Trigger: AGAAGGAGTGCCATAAATGCAAAGAAGCAAAGTGTA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGACAACAGTACACTTTaGTTCTTTGCATTTATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDDNSTL*FFAFMA Trigger: TGCCATAAATGCAAAGAAGCAAAGTGTACTGTTGTC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACTTCAGTCATATTCCCTaGATGCAGACAACTGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDFSHIP*MQTTVR Trigger: CCTCACAGTTGTCTGCATCCAGGGAATATGACTGAA...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR GCA 72 bp | TGCTGCCCTGGGTATCCCTGCTGTCCCGGGTACTGCTaGTGCTGGGGTGGGTATCCTTGCTGTGGAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CCPGYPCCPGYC*CWGGYPCCGGG Trigger: ACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCAGGGATACCCAGGGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | GGCATATGGTTAGGCCCAGGCATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCAGGAGGGCCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GIWLGPGIWPFI*FCMCGAGGPPP Trigger: GGGTGGGGGCCCTCCTGCACCACACATGCAGAACCAGATGAACGGCCAGATGCCTGGGCCTAACCATATGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | CGGGTACTGCTGCTGCTGGGGTGGGTATCCTTGCTGTaGAGGTGGTCCCTGGTAAGCGTCTTGCTGTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RVLLLLGWVSLL*RWSLVSVLLLA Trigger: GGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGGCCCTGTTGCGGAGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCAGACCATAGTTTCCCATaGGCTGCCCCTGACTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: VVGPVAEVCREASVAGPSDHSFP*AAPDSL Trigger: CAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTC...TGATGGGCCAGCGACAGATGCCTCCCTACAGACCTCCGCAACAGGGCCCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR GCA 72 bp | CAGCCCCATGGGCGCCTGCTGTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATTGTACTGCTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPHGRLLSLVML*PSRWHIVLLRR Trigger: CCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | CTGCTGCTGCTGGGGTGGGTATCCTTGCTGTGGAGGTaGTCCCTGGTAAGCGTCTTGCTGTTGGCCATACTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLLGWVSLLWR*SLVSVLLLAIL Trigger: CAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCCTGTTGCGGAGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCATGTGGACCATAGTTTCCCATaGGCTGCCCCTGACTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: WALLRRSVGRHLSLAHHVDHSFP*AAPDSL Trigger: CAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTC...CACATGATGGGCCAGCGACAGATGCCTCCCTACAGACCTCCGCAACAGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR TCA 72 bp | GAGGACAAACAACAGAAGATCGGCCCGTGTGCTGAGTaGGTGGGGTGTGTAGCTGCACGTGGGGCACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: EDKQQKIGPCAE*VGCVAARGAHV Trigger: GACATGTGCCCCACGTGCAGCTACACACCCCACTCACTCAGCACACGGGCCGATCTTCTGTTGTTTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR TCA 72 bp | GAAGGAGGACAAACAACAGAAGATCGGCCCGTGTGCTaGGTGAGTGGGGTGTGTAGCTGCACGTGGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: EGGQTTEDRPVC*VSGVCSCTWGT Trigger: TGTGCCCCACGTGCAGCTACACACCCCACTCACTCAGCACACGGGCCGATCTTCTGTTGTTTGTCCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR GCA 72 bp | TGTGTAGCTGCACGTGGGGCACATGTCCCCACTCTCTaGAGGTCACTGTGCCACCAGGCAAAGCTGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CVAARGAHVPTL*RSLCHQAKLQN Trigger: ATTCTGCAGCTTTGCCTGGTGGCACAGTGACCTGCAGAGAGTGGGGACATGTGCCCCACGTGCAGCTACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR CCA 72 bp | CGCCTGCTGTCCTTGGTAATGCTGTGCCCCTCCAGGTaGCATATTGTACTGCTGAGAAGGAGGCTGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLLSLVMLCPSR*HIVLLRRRLLV Trigger: CACCAGCAGCCTCCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGAGGAATCCTCATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTTGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVRNPHKAYRSLVQDTTVGRLLS*VMLCPS Trigger: GGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCC...AACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATGAGGATTCCTCACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR TCA 72 bp | CATTGTCATCTGGTTCTGCACGGGCATGCTCTGGGATaGCGGCACAGAATGGTTGTAACCTCCCATGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HCHLVLHGHALG*RHRMVVTSHGA Trigger: GGCTCCATGGGAGGTTACAACCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCAGAACCAGATGACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR GCA 72 bp | GCCCCTGACTCATTGTCATCTGGTTCTGCACGGGCATaGTCTGGGATGACGGCACAGAATGGTTGTAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: APDSLSSGSARA*SGMTAQNGCNL Trigger: GAGGTTACAACCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCAGAACCAGATGACAATGAGTCAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | ACCTTGACCCTGAGGATAATTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACCATAGCTCTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLTLRIIRILRT*TALRRTIALLL Trigger: CAGCAGCAGAGCTATGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAATTTTCTGTCCAATGTaGCCATCTAGAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAIFCPM*PSRVET Trigger: CGTTTCTACTCTAGATGGCAACATTGGACAGAAAAT...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR TCA 72 bp | CGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTaGCAGTCCATTTGCAGCACAGTTCTGAAACCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTHTQLLTPFRL*QSICSTVLKPL Trigger: CAGCGGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR GCA 72 bp | CCACTCTCTGCAGGTCACTGTGCCACCAGGCAAAGCTaGAGAATGACGCTAATAGTCACACACAATGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PLSAGHCATRQS*RMTLIVTHNGT Trigger: GGTGCCATTGTGTGTGACTATTAGCGTCATTCTGCAGCTTTGCCTGGTGGCACAGTGACCTGCAGAGAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCTGTGACAGTCCATTaGCAGCACAGTTCTGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LREHTPSCSHLSGCDSPFAVTVH*QHSSET Trigger: GGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGTGGGTATCCTTGCTGTGGAGGTGGTCCCTGGTAAGCGTCTTGCTGTTGCGGCCCTTGATTTGGTaGCATATTCATGTTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGWVSLLWRWSLVSVLLLRPLIW*HIHVWS Trigger: AGACCAAACATGAATATGCAACCAAATCAAGGGCCG...CAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGTGTTGGTCTATAGCCCCCATACTGCTGACCTTGACCCTGAGGATAATTTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WLCWSIAPILLTLTLRIISLVSV*LLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGA...AATTATCCTCAGGGTCAAGGTCAGCAGTATGGGGGCTATAGACCAACACAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCATATTCATGGAGCCATGGCTACTaGAAGGCATATTCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AEKEAAGASSALDLVAYSWSHGY*KAYSWS Trigger: GCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCA...TGAATATGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR TCA 72 bp | CAATGCTGCCTCCTCTCTGACGTGGTGAGAGCTCCCTaGTTACAAGACAAGGTAAAAACATCCCGCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QCCLLSDVVRAP*LQDKVKTSRFL Trigger: GAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGAGCTCTCACCACGTCAGAGAGGAGGCAGCATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR CCA 72 bp | TCTGGGATGACGGCACAGAATGGTTGTAACCTCCCATaGAGCCATGGCTACTTGAAGGCATATTCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGMTAQNGCNLP*SHGYLKAYSWS Trigger: GCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCATGGGAGGTTACAACCATTCTGTGCCGTCATCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | CATCATCGGCCCTTGATTTGGTTGCATATTCATGTTTaGTCTGGGACCATAGTTTCCCATTGGCTGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HHRPLIWLHIHV*SGTIVSHWLPL Trigger: CAGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAATCAAGGGCCGATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CCA 72 bp | ATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATGACTGTATTGGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: MTIRVILLVHAF*RTLSTMTVLVP Trigger: GGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR TCA 72 bp | TACTTGAAGGCATATTCATGGAGCTGTTTGTCATGCTaGGCTGACTGGGTCCAGGTCCCTGCATTGGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: YLKAYSWSCLSC*ADWVQVPALAY Trigger: ATATGCCAATGCAGGGACCTGGACCCAGTCAGCTCAGCATGACAAACAGCTCCATGAATATGCCTTCAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATAATTAGGATACTGAGGACCTGGACCGCCCTGCGAAGGACCATAGCTCTGATTTTCTGTCCAATGTaGCCATCTAGAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: RIIRILRTWTALRRTIALIFCPM*PSRVET Trigger: CGTTTCTACTCTAGATGGCAACATTGGACAGAAAAT...CAGAGCTATGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGCTGTGACAGTCCATTaGCAGCACAGTTCTGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPAVTVH*QHSSET Trigger: GGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGAAGGCGCCCTTTGCTaGTGCCCAGTTAAGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPEGALC*CPVKKV Trigger: AACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTTC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR TCA 72 bp | CTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTaGAACCGCTGCAAACTCCTCACGTCAATGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSGCDSPFAAQF*NRCKLLTSMHF Trigger: AAAATGCATTGACGTGAGGAGTTTGCAGCGGTTTCAGAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR TCA 72 bp | GCCATACTGGGAGTTTCCTCCTTCGTAGTAATGTTGTaGGGAATCCTCATAAGGCCTATCGTAGCCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: AILGVSSFVVML*GILIRPIVALF Trigger: GAACAAGGCTACGATAGGCCTTATGAGGATTCCTCACAACATTACTACGAAGGAGGAAACTCCCAGTATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGAAGGCGCCCTTTGCTaGTGCCCAGTTAAGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDEGALC*CPVKKV Trigger: AACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTTC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTGGAGGACCTTGTCCGGCCCTTGATTTGGTaGCATATTCATGTTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HYDHQGNIAGSCLLEDLVRPLIW*HIHVWS Trigger: AGACCAAACATGAATATGCAACCAAATCAAGGGCCG...GACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR TCA 72 bp | AACCGTAAAATGTCACCTCTCGGCTTTCAGTGCGAATaGGAAATGGCCATCAAAGCATTTTCCTCGCGCATT | + |
|
Preference number: 3 (lower is better) Translates to: NRKMSPLGFQCE*EMAIKAFSSRI Trigger: AATGCGCGAGGAAAATGCTTTGATGGCCATTTCTCATTCGCACTGAAAGCCGAGAGGTGACATTTTACGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATAACCGTAATCATTATGACCATCAGGGTAATATTGCTGGTTCATGCCTTCTGGAGCCATGGCTACTaGAAGGCATATTCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LITVIIMTIRVILLVHAFWSHGY*KAYSWS Trigger: GCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCA...GAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATGATTACGGTTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTTCAGGATACGACGGTaGCTGATAACCGTAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPFRIRR*LITVII Trigger: AATGATTACGGTTATCAGCAACCGTCGTATCCTGAA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| 3UTR GCA 72 bp | CACAGTTCTGAAACCGCTGCAAACTCCTCACGTCAATaGATTTTCTGTCCAATGTTGCCATCTAGAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HSSETAANSSRQ*IFCPMLPSRVE Trigger: TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGCAGCGGTTTCAGAACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTATTTTCTGTCCAATGTaGCCATCTAGAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPIFCPM*PSRVET Trigger: CGTTTCTACTCTAGATGGCAACATTGGACAGAAAAT...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGAATTTTCTGTCCAATGTaGCCATCTAGAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: TGLETQSAVSRQNSKSQRIFCPM*PSRVET Trigger: CGTTTCTACTCTAGATGGCAACATTGGACAGAAAAT...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR GCA 72 bp | AAACAGGACCGTTATAAAACAATTAAACCTTGCAAATaGACCAGTCTCCAGGAAGACAGTCCTGGAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KQDRYKTIKPCK*TSLQEDSPGGN Trigger: ATTTCCTCCAGGACTGTCTTCCTGGAGACTGGTGCATTTGCAAGGTTTAATTGTTTTATAACGGTCCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR GCA 72 bp | TTTACGAAACAGGACCGTTATAAAACAATTAAACCTTaGAAATGCACCAGTCTCCAGGAAGACAGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FTKQDRYKTIKP*KCTSLQEDSPG Trigger: TCCAGGACTGTCTTCCTGGAGACTGGTGCATTTGCAAGGTTTAATTGTTTTATAACGGTCCTGTTTCGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGATTTTCTGTCCAATGTaGCCATCTAGAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: SLITRQGKNIPLPPFLLLIFCPM*PSRVET Trigger: CGTTTCTACTCTAGATGGCAACATTGGACAGAAAAT...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR TCA 72 bp | TTAATTCTAATTAACGTGGGCATGGCAAGAGAATATTaGTCAAGTCCTAGAATGCAAATACCGTCTACTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LILINVGMAREY*SSPRMQIPSTR Trigger: ACGAGTAGACGGTATTTGCATTCTAGGACTTGATCAATATTCTCTTGCCATGCCCACGTTAATTAGAATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR CCA 72 bp | CAATTACAAAGATATGTTATATTCAGTCATATTCCCTaGATGCAGACAACTGTGAGGATACAGCAACTTACC | + |
|
Preference number: 3 (lower is better) Translates to: QLQRYVIFSHIP*MQTTVRIQQLT Trigger: GGTAAGTTGCTGTATCCTCACAGTTGTCTGCATCCAGGGAATATGACTGAATATAACATATCTTTGTAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR TCA 72 bp | CAGTCTGAATGTAAAGCCTGTAAGATGATGCTGAACTaGATATTATTACTGAAAATACAGAATCTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QSECKACKMMLN*ILLLKIQNLRA Trigger: TGCTCTGAGATTCTGTATTTTCAGTAATAATATTCAGTTCAGCATCATCTTACAGGCTTTACATTCAGACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| 3UTR CCA 72 bp | CACACTTGGCAATTCGGAAACAGCCATGCTATTTCATaGGATACTACAAAACTTATTTATAATTCATTCGAT | + |
|
Preference number: 3 (lower is better) Translates to: HTWQFGNSHAIS*DTTKLIYNSFD Trigger: ATCGAATGAATTATAAATAAGTTTTGTAGTATCCCATGAAATAGCATGGCTGTTTCCGAATTGCCAAGTGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCGCCCTTGCCCCGCTaGCTCGGGGCTGCGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRASPLPR*LGAANA Trigger: GGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGA...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAAGGCCTCTGCTGGGGTaGCTGGGGTGGTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRARPLLG*LGWSWL Trigger: CAGCCAGGACCACCCCAGCCACCCCAGCAGAGGCCT...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAGGTGGAGGGCCACTCTaGCTCATCCCTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAGGGPL*LIPPGP Trigger: GGGTCCTGGAGGGATGAGTCAGAGTGGCCCTCCACC...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCGGTGGAGGGCCACTCTaGCTCATCCCTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIGGGPL*LIPPGP Trigger: GGGTCCTGGAGGGATGAGTCAGAGTGGCCCTCCACC...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCATGTGTGGTGCAGGAGGGCCCCCACCCACCATTCCATCTGAAGGCATGTCGCCCTTGCCCCGCTaGCTCGGGGCTGCGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCMCGAGGPPPTIPSEGMSPLPR*LGAANA Trigger: GGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGA...CATGCCTTCAGATGGAATGGTGGGTGGGGGCCCTCCTGCACCACACATGCAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTCGCCCTTGCCCCGCTaGCTCGGGGCTGCGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFSPLPR*LGAANA Trigger: GGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCTGGGGTGGGTATCCTTaGTGTGGAGGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIWGGYP*CGGGPW Trigger: CCAGGGACCACCTCCACAGCAAGGATACCCACCCCA...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCTGCTGTCCCGGGTACTaGTGCTGCTGGGGTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSICCPGY*CCWGGY Trigger: ATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCA...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATGCTGTCCCGGGTACTaGTGCTGCTGGGGTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRACCPGY*CCWGGY Trigger: ATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCA...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | AGGATAATTAGGATACTGAGGACCTGGACCGCCCTGCGAAGGACCATAGCTCTGTCGCCCTTGCCCCGCTaGCTCGGGGCTGCGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIIRILRTWTALRRTIALSPLPR*LGAANA Trigger: GGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGA...CAGAGCTATGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSILPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAGGGTACTGCTGCTGCTaGGGTGGGTATCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAGYCCC*GGYPCC Trigger: ACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCC...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCGGGTACTGCTGCTGCTaGGGTGGGTATCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIGYCCC*GGYPCC Trigger: ACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCC...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| 3UTR CAA 72 bp | CTGTCCCGGGTACTGCTGCTGCTGGGGTGGGTATCCTaGCTGTGGAGGTGGTCCCTGGTAAGCGTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRVLLLLGWVS*LWRWSLVSVLL Trigger: CAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAAGCTGTTTGTCATGCTaGGCTGACTGGGTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRASCLSC*ADWVQV Trigger: GACCTGGACCCAGTCAGCTCAGCATGACAAACAGCT...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCCCATTGGCTGCCCCTaGCTCATTGTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIPIGCP*LIVIWF Trigger: GAACCAGATGACAATGAGTCAGGGGCAGCCAATGGG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAGGCATATTGTACTGCTaGGAAGGAGGCTGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAGILYC*EGGCWC Trigger: GCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCC...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCACGCTGGCCCATCATGTaGCTGCCTTGGTTAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRARWPIM*LPWLTW Trigger: CCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCG...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| 3UTR CAA 72 bp | CTGTCGCTGGCCCATCATGTGACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAHHVTALVN*AHQPHGRLLSL Trigger: CAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSILVHAF*RTLSTM Trigger: CATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCGGAGCCATGGCTACTTaGAGGCATATTCATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIGAMAT*RHIHGA Trigger: AGCTCCATGAATATGCCTTCAAGTAGCCATGGCTCC...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAIWPFI*FCMCGA Trigger: TGCACCACACATGCAGAACCAGATGAACGGCCAGAT...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIIWPFI*FCMCGA Trigger: TGCACCACACATGCAGAACCAGATGAACGGCCAGAT...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCAGGTTGTAACCTCCCATaGAGCCATGGCTACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAGCNLP*SHGYLK Trigger: CTTCAAGTAGCCATGGCTCCATGGGAGGTTACAACC...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
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| CDS-3UTR CCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTAGGCCTCTGCTGGGGTaGCTGGGGTGGTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSRPLLG*LGWSWL Trigger: CAGCCAGGACCACCCCAGCCACCCCAGCAGAGGCCT...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCCATCATGTGACTGCCTTGGTTAACTTGGCCCATCAGCCCCATGGGCGCTCTGCTGATACCTTCTaGATGGCGGCGGGCGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LAHHVTALVNLAHQPHGRSADTF*MAAGVI Trigger: AATCACGCCCGCCGCCATCCAGAAGGTATCAGCAGA...GCGCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGTCACATGATGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234120.2 |
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| CDS-3UTR GCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCGTTCTGCATGTGTGGTaGAGGAGGGCCCCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFVLHVW*RRAPTH Trigger: GTGGGTGGGGGCCCTCCTGCACCACACATGCAGAAC...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTGGGGTGGGTATCCTTaGTGTGGAGGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFWGGYP*CGGGPW Trigger: CCAGGGACCACCTCCACAGCAAGGATACCCACCCCA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR GCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCCCGGGTACTGCTGCTaGTGGGGTGGGTATCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFPGYCC*WGGYPC Trigger: GCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCCCTCCAGGACCCATTaGCATAGTCTGTGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFPSRTH*HSLCGR Trigger: CCGCCCACACAGACTATGCCAATGGGTCCTGGAGGG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTGCTCTGCTGCTGCCCTaGGTATCCCTGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSALLLP*VSLLSR Trigger: CCGGGACAGCAGGGATACCCAGGGCAGCAGCAGAGC...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFRILRT*TALRRT Trigger: GGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCTGGGGTGGCTGGGGTaGTCCTGGCTGTGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFLGWLG*SWLCWS Trigger: AGACCAACACAGCCAGGACCACCCCAGCCACCCCAG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| 3UTR CAA 72 bp | AACTTGGCCCATCAGCCCCATGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCCAGGTGGCATATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLAHQPHGRLLS*VMLCPSRWHIV Trigger: TACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCCATGGGGCTGATGGGCCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR GCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTCCCGGGTACTGCTGCTaGTGGGGTGGGTATCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSPGYCC*WGGYPC Trigger: GCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGG...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCCCTCCAGGACCCATTaGCATAGTCTGTGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFPSRTH*HSLCGR Trigger: CCGCCCACACAGACTATGCCAATGGGTCCTGGAGGG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGGGTACTGCTGCTGCTaGGGTGGGTATCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFGYCCC*GGYPCC Trigger: ACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFRILRT*TALRRT Trigger: GGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCT...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGAGGCCTCTGCTGGGGTaGCTGGGGTGGTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKRPLLG*LGWSWL Trigger: CAGCCAGGACCACCCCAGCCACCCCAGCAGAGGCCT...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTTCTGAAGGCATGTTGTaGGAGCGGGGAGGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSSEGML*ERGGGG Trigger: TCCACCCCCTCCCCGCTCTCACAACATGCCTTCAGA...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGCATGTGTGGTGCAGGAGGGCCCCCACCCACCATTCCATCTGAAGGCATGGTATGCAATATCTGCTaGTACCTTCTGGATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCMCGAGGPPPTIPSEGMVCNIC*YLLDGG Trigger: GCCGCCATCCAGAAGGTATCAGCAGATATTGCATAC...CATGCCTTCAGATGGAATGGTGGGTGGGGGCCCTCCTGCACCACACATGCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234120.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATCGCCCTTGCCCCGCTaGCTCGGGGCTGCGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVESPLPR*LGAANA Trigger: GGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAAGTTCTGCATGTGTGGTaGAGGAGGGCCCCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLEVLHVW*RRAPTH Trigger: GTGGGTGGGGGCCCTCCTGCACCACACATGCAGAAC...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCTGGGTCCAGGTCCCTaGATTGGCATATGGTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFLGPGP*IGIWLG Trigger: GCCTAACCATATGCCAATGCAGGGACCTGGACCCAG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGCCCTGGGTATCCCTaGTGTCCCGGGTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLECPGYP*CPGYCC Trigger: GCAGCAGTACCCGGGACAGCAGGGATACCCAGGGCA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGAAGGAGGCTGCTGGTGCATCATCGGCCCTTGATTTGGTTGCATATTCCCTCCAGGACCCATTaGCATAGTCTGTGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRRRLLVHHRPLIWLHIPSRTH*HSLCGR Trigger: CCGCCCACACAGACTATGCCAATGGGTCCTGGAGGG...AATATGCAACCAAATCAAGGGCCGATGATGCACCAGCAGCCTCCTTCTCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAACTGGTTCTGCATGTGTaGTGCAGGAGGGCCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLELVLHV*CRRAPT Trigger: GGTGGGGGCCCTCCTGCACCACACATGCAGAACCAG...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTCCAGGTCCCTGCATTaGCATATGGTTAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFSRSLH*HMVRPR Trigger: CCTGGGCCTAACCATATGCCAATGCAGGGACCTGGA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCACATCGGCCCTTGATTTaGTTGCATATTCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGFCLPSPVFRAPQHRAHRPLI*LHIHVW Trigger: CCAAACATGAATATGCAACCAAATCAAGGGCCGATG...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCATCGGCCCTTGATTTaGTTGCATATTCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIHRPLI*LHIHVW Trigger: CCAAACATGAATATGCAACCAAATCAAGGGCCGATG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAACTGGGGTGGCTGGGGTaGTCCTGGCTGTGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLELGWLG*SWLCWS Trigger: AGACCAACACAGCCAGGACCACCCCAGCCACCCCAG...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTACCCACCATTCCATCTaGAGGCATGTTGTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFTHHSI*RHVVRA Trigger: CGCTCTCACAACATGCCTTCAGATGGAATGGTGGGT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGGTTCTGCATGTGTGGTaGAGGAGGGCCCCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKVLHVW*RRAPTH Trigger: GTGGGTGGGGGCCCTCCTGCACCACACATGCAGAAC...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGGGGTGGGTATCCTTaGTGTGGAGGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLEWGGYP*CGGGPW Trigger: CCAGGGACCACCTCCACAGCAAGGATACCCACCCCA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTCCCGGGTACTGCTaGTGCTGGGGTGGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLECPGYC*CWGGYP Trigger: AGGATACCCACCCCAGCAGCAGCAGTACCCGGGACA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTATGCCCTGGGTATCCCTaGTGTCCCGGGTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVCPGYP*CPGYCC Trigger: GCAGCAGTACCCGGGACAGCAGGGATACCCAGGGCA...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTCCAGGTCCCTGCATTaGCATATGGTTAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFSRSLH*HMVRPR Trigger: CCTGGGCCTAACCATATGCCAATGCAGGGACCTGGA...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCTATTCATGTTTGGTCTaGGACCATAGTTTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLPPLACLQSTTAPSIYSCLV*DHSFPL Trigger: CAATGGGAAACTATGGTCCCAGACCAAACATGAATA...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGCTCTGCTGCTGCCCTaGGTATCCCTGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPALLLP*VSLLSR Trigger: CCGGGACAGCAGGGATACCCAGGGCAGCAGCAGAGC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACTGGGGTGGCTGGGGTaGTCCTGGCTGTGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLGWLG*SWLCWS Trigger: AGACCAACACAGCCAGGACCACCCCAGCCACCCCAG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCTGGGGTGGCTGGGGTaGTCCTGGCTGTGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKLGWLG*SWLCWS Trigger: AGACCAACACAGCCAGGACCACCCCAGCCACCCCAG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGGAGCCATGGCTACTTaGAGGCATATTCATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFGAMAT*RHIHGA Trigger: AGCTCCATGAATATGCCTTCAAGTAGCCATGGCTCC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR TCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTGGCATATTGTACTGCTaGGAAGGAGGCTGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSGILYC*EGGCWC Trigger: GCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCC...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFSLVML*PSRWHI Trigger: AATATGCCACCTGGAGGGGCACAGCATTACCAAGGA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFLVHAF*RTLSTM Trigger: CATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCTGCTGCTGCTGGGGTaGGTATCCTTGCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKLLLLG*VSLLWR Trigger: CCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR TCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAAAGCTGTTTGTCATGCTaGGCTGACTGGGTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLESCLSC*ADWVQV Trigger: GACCTGGACCCAGTCAGCTCAGCATGACAAACAGCT...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
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| CDS-3UTR GCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFSLVML*PSRWHI Trigger: AATATGCCACCTGGAGGGGCACAGCATTACCAAGGA...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR GCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTGCTGTCCCGGGTACTaGTGCTGCTGGGGTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPCCPGY*CCWGGY Trigger: ATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCCTCCCATGGAGCCATaGCTACTTGAAGGCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFPPMEP*LLEGIF Trigger: GAATATGCCTTCAAGTAGCCATGGCTCCATGGGAGG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
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| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTACCATAGTTTCCCATTaGCTGCCCCTGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFTIVSH*LPLTHC Trigger: ACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSLVHAF*RTLSTM Trigger: CATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAG...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGCTCTGCTGCTGCCCTaGGTATCCCTGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDALLLP*VSLLSR Trigger: CCGGGACAGCAGGGATACCCAGGGCAGCAGCAGAGC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPRILRT*TALRRT Trigger: GGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCT...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGGTGGAGGGCCACTCTaGCTCATCCCTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLGGGPL*LIPPGP Trigger: GGGTCCTGGAGGGATGAGTCAGAGTGGCCCTCCACC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACGCTGGCCCATCATGTaGCTGCCTTGGTTAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVRWPIM*LPWLTW Trigger: CCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACCGTTCATCTGGTTCTaGATGTGTGGTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVPFIWF*MCGAGG Trigger: CCCTCCTGCACCACACATGCAGAACCAGATGAACGG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATGCCCTGGGTATCCCTaGTGTCCCGGGTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVECPGYP*CPGYCC Trigger: GCAGCAGTACCCGGGACAGCAGGGATACCCAGGGCA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTGCCCTGGGTATCCCTaGTGTCCCGGGTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDCPGYP*CPGYCC Trigger: GCAGCAGTACCCGGGACAGCAGGGATACCCAGGGCA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APQHRASTTLHINRGSDSIWPFI*FCMCGA Trigger: TGCACCACACATGCAGAACCAGATGAACGGCCAGAT...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCCCTGCATTGGCATATaGTTAGGCCCAGGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKPCIGI*LGPGIW Trigger: CCAGATGCCTGGGCCTAACCATATGCCAATGCAGGG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTGCACGGGCATGCTCTaGGATGACGGCACAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPCTGML*DDGTEW Trigger: CCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCACCATAGTTTCCCATTaGCTGCCCCTGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFTIVSH*LPLTHC Trigger: ACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGT...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGACTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLETQSAVSRQNSKSQRLPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR CCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTCTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPLPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGAGGGTACTGCTGCTGCTaGGGTGGGTATCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLETQSAVSRQNSKSQRGYCCC*GGYPCC Trigger: ACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCC...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGCTCTGCTGCTGCCCTaGGTATCCCTGCTGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLALLLP*VSLLSR Trigger: CCGGGACAGCAGGGATACCCAGGGCAGCAGCAGAGC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| 3UTR CAA 72 bp | TGGCTGTGTTGGTCTATAGCCCCCATACTGCTGACCTaGACCCTGAGGATAATTAGGATACTGAGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLCWSIAPILLT*TLRIIRILRTW Trigger: CCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGGGGCTATAGACCAACACAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS-3UTR TCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATCTGAAGGCATGTTGTaGGAGCGGGGAGGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVESEGML*ERGGGG Trigger: TCCACCCCCTCCCCGCTCTCACAACATGCCTTCAGA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAACCCACCATTCCATCTaGAGGCATGTTGTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVTHHSI*RHVVRA Trigger: CGCTCTCACAACATGCCTTCAGATGGAATGGTGGGT...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGGGCATGCTCTGGGATaGCGGCACAGAATGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPGHALG*RHRMVV Trigger: TACAACCATTCTGTGCCGTCATCCCAGAGCATGCCC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR TCA 90 bp | ACCGGACTAGAAACCCAGAGTGCAGTCTCCAGACAAAACAGTAAGAGTCAAAGAGGCATATTGTACTGCTaGGAAGGAGGCTGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLETQSAVSRQNSKSQRGILYC*EGGCWC Trigger: GCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCC...TCTTTGACTCTTACTGTTTTGTCTGGAGACTGCACTCTGGGTTTCTAGTCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR GCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLESLVML*PSRWHI Trigger: AATATGCCACCTGGAGGGGCACAGCATTACCAAGGA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATGGGGTGGGTATCCTTaGTGTGGAGGTGGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEWGGYP*CGGGPW Trigger: CCAGGGACCACCTCCACAGCAAGGATACCCACCCCA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATGTCCCGGGTACTGCTaGTGCTGGGGTGGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVECPGYC*CWGGYP Trigger: AGGATACCCACCCCAGCAGCAGCAGTACCCGGGACA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAAATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLEIWPFI*FCMCGA Trigger: TGCACCACACATGCAGAACCAGATGAACGGCCAGAT...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAAGGTTGTAACCTCCCATaGAGCCATGGCTACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLEGCNLP*SHGYLK Trigger: CTTCAAGTAGCCATGGCTCCATGGGAGGTTACAACC...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCATCGGCCCTTGATTTaGTTGCATATTCATGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFHRPLI*LHIHVW Trigger: CCAAACATGAATATGCAACCAAATCAAGGGCCGATG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLVHAF*RTLSTM Trigger: CATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACTGCTGCTGCTGGGGTaGGTATCCTTGCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVELLLLG*VSLLWR Trigger: CCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| 3UTR CAA 72 bp | GCATCATCGGCCCTTGATTTGGTTGCATATTCATGTTaGGTCTGGGACCATAGTTTCCCATTGGCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSALDLVAYSC*VWDHSFPLAAP Trigger: AGGGGCAGCCAATGGGAAACTATGGTCCCAGACCAAACATGAATATGCAACCAAATCAAGGGCCGATGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
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| CDS-3UTR TCA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTTCGTAGTAATGTTGTaGGGAATCCTCATAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFFVVML*GILIRP Trigger: AGGCCTTATGAGGATTCCTCACAACATTACTACGAA...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
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| CDS-3UTR GCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGTGTCCCGGGTACTGCTaGTGCTGGGGTGGGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLCPGYC*CWGGYP Trigger: AGGATACCCACCCCAGCAGCAGCAGTACCCGGGACA...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCCTCCCATGGAGCCATaGCTACTTGAAGGCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFACAQLRKLKHKRVKPPMEP*LLEGIF Trigger: GAATATGCCTTCAAGTAGCCATGGCTCCATGGGAGG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
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| CDS-3UTR CCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATGCACGGGCATGCTCTaGGATGACGGCACAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVECTGML*DDGTEW Trigger: CCATTCTGTGCCGTCATCCCAGAGCATGCCCGTGCA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
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| CDS-3UTR CCA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTATTCATGTTTGGTCTaGGACCATAGTTTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LREHTPSCSHLSGCDSPFYSCLV*DHSFPL Trigger: CAATGGGAAACTATGGTCCCAGACCAAACATGAATA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDLPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR CCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACTGCCTTGGTTAACTTaGCCCATCAGCCCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVELPWLT*PISPMG Trigger: GCCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGCTGCTGCTGCTGGGGTaGGTATCCTTGCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLLLLLG*VSLLWR Trigger: CCTCCACAGCAAGGATACCCACCCCAGCAGCAGCAG...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLRILRT*TALRRT Trigger: GGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCT...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR CCA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACAGGCCTCTGCTGGGGTaGCTGGGGTGGTCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDRPLLG*LGWSWL Trigger: CAGCCAGGACCACCCCAGCCACCCCAGCAGAGGCCT...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR TCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACCCATTGGCTGCCCCTaGCTCATTGTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEPIGCP*LIVIWF Trigger: GAACCAGATGACAATGAGTCAGGGGCAGCCAATGGG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCCCATTGGCTGCCCCTaGCTCATTGTCATCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDPIGCP*LIVIWF Trigger: GAACCAGATGACAATGAGTCAGGGGCAGCCAATGGG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
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| CDS-3UTR TCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACGCTGGCCCATCATGTaGCTGCCTTGGTTAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVERWPIM*LPWLTW Trigger: CCAAGTTAACCAAGGCAGTCACATGATGGGCCAGCG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACCCTGCATTGGCATATaGTTAGGCCCAGGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEPCIGI*LGPGIW Trigger: CCAGATGCCTGGGCCTAACCATATGCCAATGCAGGG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACACCCACCATTCCATCTaGAGGCATGTTGTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDTHHSI*RHVVRA Trigger: CGCTCTCACAACATGCCTTCAGATGGAATGGTGGGT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGGCATATTGTACTGCTaGGAAGGAGGCTGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLGILYC*EGGCWC Trigger: GCACCAGCAGCCTCCTTCTCAGCAGTACAATATGCC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAAATATTGCTGGTTCATaGCTTCTGGAGGACCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVNIAGS*LLEDLV Trigger: GACAAGGTCCTCCAGAAGGCATGAACCAGCAATATT...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| 3UTR CAA 72 bp | AGGGTAATATTGCTGGTTCATGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTGGTCCCCATAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVILLVHAFWRT*STMTVLVPIIV Trigger: GACTATTATGGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDSLVML*PSRWHI Trigger: AATATGCCACCTGGAGGGGCACAGCATTACCAAGGA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACCCCTCCAGGACCCATTaGCATAGTCTGTGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDPSRTH*HSLCGR Trigger: CCGCCCACACAGACTATGCCAATGGGTCCTGGAGGG...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR CCA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATTGCATATTCATGTTTaGTCTGGGACCATAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMVQCCDNVPANRYWLLELHIHV*SGTIVS Trigger: GGAAACTATGGTCCCAGACCAAACATGAATATGCAA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| 3UTR CAA 72 bp | CTGATAACCGTAATCATTATGACCATCAGGGTAATATaGCTGGTTCATGCCTTCTGGAGGACCTTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LITVIIMTIRVI*LVHAFWRTLST Trigger: GGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATGATTACGGTTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGTCCTTGGTAATGCTGTaGCCCTCCAGGTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLSLVML*PSRWHI Trigger: AATATGCCACCTGGAGGGGCACAGCATTACCAAGGA...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACACCATAGTTTCCCATTaGCTGCCCCTGACTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDTIVSH*LPLTHC Trigger: ACAATGAGTCAGGGGCAGCCAATGGGAAACTATGGT...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| 3UTR CAA 72 bp | ATAAGGCCTATCGTAGCCTTGTTCAGGATACGACGGTaGCTGATAACCGTAATCATTATGACCATCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRPIVALFRIRR*LITVIIMTIRV Trigger: TACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| 3UTR CAA 72 bp | TGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATaGGAATGTAAGGACATTTTCACTGCTGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCDNVPANRYWL*ECKDIFTAGNF Trigger: GAAATTACCAGCAGTGAAAATGTCCTTACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGAATATTGCTGGTTCATaGCTTCTGGAGGACCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLNIAGS*LLEDLV Trigger: GACAAGGTCCTCCAGAAGGCATGAACCAGCAATATT...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGTTCGTAGTAATGTTGTaGGGAATCCTCATAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLITRQGKNIPLPPFLLLFVVML*GILIRP Trigger: AGGCCTTATGAGGATTCCTCACAACATTACTACGAA...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTATTCATGTTTGGTCTaGGACCATAGTTTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDYSCLV*DHSFPL Trigger: CAATGGGAAACTATGGTCCCAGACCAAACATGAATA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTTGCATATTCATGTTTaGTCTGGGACCATAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDLHIHV*SGTIVS Trigger: GGAAACTATGGTCCCAGACCAAACATGAATATGCAA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCTGCTGTCCCGGGTACTGCTGCTGCTGGGGTGGGTATCCTTGCTGTGGAGGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPAVPGTAAAGVGILAVEGVISP*PRCLGA Trigger: AGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCC...CTCCACAGCAAGGATACCCACCCCAGCAGCAGCAGTACCCGGGACAGCAGGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234224.2 |
||
| CDS CCA 90 bp | GGAGGCTGCTGGTGCATCATCGGCCCAGGCATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCAGGAGGGCCCCCACCCACCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGCWCIIGPGIWPFI*FCMCGAGGPPPTIP Trigger: TGGAATGGTGGGTGGGGGCCCTCCTGCACCACACATGCAGAACCAGATGAACGGCCAGATGCCTGGGCCGATGATGCACCAGCAGCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040964.13 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFGVISP*PRCLGA Trigger: AGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLLPPLACLQSTTAPSITALVN*AHQPHG Trigger: CCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGT...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCTTGGTAATGCTGTGCCCCTCCAGGTGGCATATTGTACTGCTGAGAAGGGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLVMLCPSRWHIVLLRRGVISP*PRCLGA Trigger: AGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCC...CCTTCTCAGCAGTACAATATGCCACCTGGAGGGGCACAGCATTACCAAGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000234120.2 ENSMUST00000234224.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVGFCLPSPVFRAPQHRASLVSV*LLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGA...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFGRLLS*VMLCPS Trigger: GGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCC...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCCTGTGGTGGGCCCTGTaGCGGAGGTCTGTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFLWWAL*RRSVGR Trigger: CCTCCCTACAGACCTCCGCAACAGGGCCCACCACAG...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS CCA 90 bp | ATACTGCTGACCTTGACCCTGAGGATAATTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACCCTGTTGCGGAGGTCTGTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLTLTLRIIRILRT*TALRRTLLRRSVGR Trigger: CCTCCCTACAGACCTCCGCAACAGGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGTCAGCAGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPGVISP*PRCLGA Trigger: AGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAAGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMVQCCDNVPANRYWLLEGRLLS*VMLCPS Trigger: GGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCC...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFTALVN*AHQPHG Trigger: CCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGT...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCTCCACCATGACTGTATaGGTCCCCATAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLPPLACLQSTTAPSISTMTV*VPIIVF Trigger: GAAGACTATTATGGGGACCAATACAGTCATGGTGGA...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CAA 90 bp | GTGGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCATCGGCCCTTGATTaGGTTGCATATTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVGFCLPSPVFRAPQHRASSALD*VAYSCL Trigger: CAAACATGAATATGCAACCAAATCAAGGGCCGATGA...TGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACTGTGGTGGGCCCTGTaGCGGAGGTCTGTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLWWAL*RRSVGR Trigger: CCTCCCTACAGACCTCCGCAACAGGGCCCACCACAG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCCAAGGTATACCAGGTTaGTATGCAATATCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGLLPPLACLQSTTAPSIQGIPG*YAISAD Trigger: ATCAGCAGATATTGCATACAAACCTGGTATACCTTG...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPGRLLS*VMLCPS Trigger: GGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
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| CDS-3UTR CAA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: APQHRASTTLHINRGSDSTALVN*AHQPHG Trigger: CCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGT...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTACTGGGGTGGGTATCCTaGCTGTGGAGGTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVLGWVS*LWRWSL Trigger: CAGGGACCACCTCCACAGCAAGGATACCCACCCCAG...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CAA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGCTGGGGTGGGTATCCTaGCTGTGGAGGTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAPFACAQLRKLKHKRVKLGWVS*LWRWSL Trigger: CAGGGACCACCTCCACAGCAAGGATACCCACCCCAG...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLGVISP*PRCLGA Trigger: AGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS-3UTR CAA 90 bp | GGTGGGCTTCTGCCTCCCCTCGCCTGTCTTCAGAGCACCACAGCACCGAGCATCGAGAGACTGCATATTTaGATTAGAGTCTGCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGLLPPLACLQSTTAPSIERLHI*IRVCYC Trigger: ACAATAGCAGACTCTAATCAAAATATGCAGTCTCTC...GATGCTCGGTGCTGTGGTGCTCTGAAGACAGGCGAGGGGAGGCAGAAGCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCGACCATAGTTTCCCATaGGCTGCCCCTGACTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFDHSFP*AAPDSL Trigger: CAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTC...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCCCATACTGCTGACCTaGACCCTGAGGATAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFPILLT*TLRIIR Trigger: CCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAAGGGCGCCTGCTGTCCTaGGTAATGCTGTGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEGRLLS*VMLCPS Trigger: GGAGGGGCACAGCATTACCAAGGACAGCAGGCGCCC...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCTGTGGTGGGCCCTGTaGCGGAGGTCTGTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDLWWAL*RRSVGR Trigger: CCTCCCTACAGACCTCCGCAACAGGGCCCACCACAG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTTCCATCAGGGTAATATaGCTGGTTCATGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFSIRVI*LVHAFW Trigger: CCAGAAGGCATGAACCAGCAATATTACCCTGATGGA...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTTGGAGCCATGGCTACTaGAAGGCATATTCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: APQHRASTTLHINRGSDSWSHGY*KAYSWS Trigger: GCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCA...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAACACACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTCGGCCCTTGATTTGGTaGCATATTCATGTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LREHTPSCSHLSGCDSPFRPLIW*HIHVWS Trigger: AGACCAAACATGAATATGCAACCAAATCAAGGGCCG...AAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGTGTGTTCGCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGCTGTGGTGGGCCCTGTaGCGGAGGTCTGTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLLWWAL*RRSVGR Trigger: CCTCCCTACAGACCTCCGCAACAGGGCCCACCACAG...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCGCCCTTTGCTTGTGCCCAGTTAAGAAAGTTAAAGCACAAGCGTGTGAAGTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAPFACAQLRKLKHKRVKSLVSV*LLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGA...CTTCACACGCTTGTGCTTTAACTTTCTTAACTGGGCACAAGCAAAGGGCGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACTGGGGTGGGTATCCTaGCTGTGGAGGTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVELGWVS*LWRWSL Trigger: CAGGGACCACCTCCACAGCAAGGATACCCACCCCAG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGGAGCCATGGCTACTaGAAGGCATATTCATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SMVQCCDNVPANRYWLLEWSHGY*KAYSWS Trigger: GCTCCATGAATATGCCTTCAAGTAGCCATGGCTCCA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTCCACCATGACTGTATaGGTCCCCATAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFSTMTV*VPIIVF Trigger: GAAGACTATTATGGGGACCAATACAGTCATGGTGGA...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATGTAGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: WCSAVTTCLLIGTGYWNVAFWRT*STMTVL Trigger: CAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGC...TACATTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GCACCACAGCACCGAGCATCTACCACACTCCACATTAACAGGGGTTCTGATTCTACCATCAGGGTAATATaGCTGGTTCATGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: APQHRASTTLHINRGSDSTIRVI*LVHAFW Trigger: CCAGAAGGCATGAACCAGCAATATTACCCTGATGGT...AGAATCAGAACCCCTGTTAATGTGGAGTGTGGTAGATGCTCGGTGCTGTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAACCCATACTGCTGACCTaGACCCTGAGGATAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVQCCDNVPANRYWLLEPILLT*TLRIIR Trigger: CCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGG...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCATGTGACTGCCTTGGTTAACCAAGGTATACCAGGTTaGTATGCAATATCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSVGRHLSLAHHVTALVNQGIPG*YAISAD Trigger: ATCAGCAGATATTGCATACAAACCTGGTATACCTTG...GTTAACCAAGGCAGTCACATGATGGGCCAGCGACAGATGCCTCCCTACAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234120.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAAACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVETALVN*AHQPHG Trigger: CCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGT...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGCTGCTCACACCTTTCAGGCTGTGACAGTCCATTTGCAGCACAGTTCTTCAGGATACGACGGTaGCTGATAACCGTAATCATT | + |
|
Preference number: 5 (lower is better) Translates to: TPSCSHLSGCDSPFAAQFFRIRR*LITVII Trigger: AATGATTACGGTTATCAGCAACCGTCGTATCCTGAA...GAACTGTGCTGCAAATGGACTGTCACAGCCTGAAAGGTGTGAGCAGCTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTAGGCCTATCGTAGCCTaGTTCAGGATACGACGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPRPIVA*FRIRRL Trigger: CAACCGTCGTATCCTGAACAAGGCTACGATAGGCCT...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAACGGCCCTTGATTTGGTaGCATATTCATGTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMVQCCDNVPANRYWLLERPLIW*HIHVWS Trigger: AGACCAAACATGAATATGCAACCAAATCAAGGGCCG...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGACTGCCTTGGTTAACTaGGCCCATCAGCCCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLTALVN*AHQPHG Trigger: CCCATGGGGCTGATGGGCCAAGTTAACCAAGGCAGT...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDSLVSV*LLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVESLVSV*LLAILG Trigger: TCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTCCCATACTGCTGACCTaGACCCTGAGGATAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPPILLT*TLRIIR Trigger: CCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGG...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS CCA 90 bp | ATACTGGGAGTTTCCATCAGGGTAATATTGCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATGACTGTATTGGTCCCCATAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGVSIRVILLVHAF*RTLSTMTVLVPIIV Trigger: GACTATTATGGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGAAACTCCCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACGACCATAGTTTCCCATaGGCTGCCCCTGACTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDDHSFP*AAPDSL Trigger: CAATGAGTCAGGGGCAGCCAATGGGAAACTATGGTC...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAAGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEAFWRT*STMTVL Trigger: CAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGC...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGTGCAGTGCTGTGACAACGTGCCTGCTAATAGGTACTGGCTATTGGAATTCAGGATACGACGGTaGCTGATAACCGTAATCATT | + |
|
Preference number: 5 (lower is better) Translates to: SMVQCCDNVPANRYWLLEFRIRR*LITVII Trigger: AATGATTACGGTTATCAGCAACCGTCGTATCCTGAA...TTCCAATAGCCAGTACCTATTAGCAGGCACGTTGTCACAGCACTGCACCATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTCCACCATGACTGTATaGGTCCCCATAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPSTMTV*VPIIVF Trigger: GAAGACTATTATGGGGACCAATACAGTCATGGTGGA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLAFWRT*STMTVL Trigger: CAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACCCATACTGCTGACCTaGACCCTGAGGATAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEPILLT*TLRIIR Trigger: CCTAATTATCCTCAGGGTCAAGGTCAGCAGTATGGG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTTCATCGGCCCTTGATTaGGTTGCATATTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPSSALD*VAYSCL Trigger: CAAACATGAATATGCAACCAAATCAAGGGCCGATGA...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAATCCATCAGGGTAATATaGCTGGTTCATGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVESIRVI*LVHAFW Trigger: CCAGAAGGCATGAACCAGCAATATTACCCTGATGGA...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTCAAGGTATACCAGGTTaGTATGCAATATCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPQGIPG*YAISAD Trigger: ATCAGCAGATATTGCATACAAACCTGGTATACCTTG...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACCGGCCCTTGATTTGGTaGCATATTCATGTTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDRPLIW*HIHVWS Trigger: AGACCAAACATGAATATGCAACCAAATCAAGGGCCG...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAAGAACACCCTATACTCTGACCTTAAACACACACACTCTCATCCAGACTCCACCATGACTGTATaGGTCCCCATAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLKNTLYSDLKHTHSHPDSTMTV*VPIIVF Trigger: GAAGACTATTATGGGGACCAATACAGTCATGGTGGA...GTCTGGATGAGAGTGTGTGTGTTTAAGGTCAGAGTATAGGGTGTTCTTCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCTACTTGCTGACGAAGCAGCCACTTAGCCAAAGGTTTTCCCAAAAACCTGAGAGACTGCATATTTaGATTAGAGTCTGCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSYLLTKQPLSQRFSQKPERLHI*IRVCYC Trigger: ACAATAGCAGACTCTAATCAAAATATGCAGTCTCTC...AGGTTTTTGGGAAAACCTTTGGCTAAGTGGCTGCTTCGTCAGCAAGTAGCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDAFWRT*STMTVL Trigger: CAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGC...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | GCAAACTCCTCACGTCAATGCATTTTCTGTCCAATGTTGCCATCTAGAGTAGAACAAGGTATACCAGGTTaGTATGCAATATCTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ANSSRQCIFCPMLPSRVEQGIPG*YAISAD Trigger: ATCAGCAGATATTGCATACAAACCTGGTATACCTTG...TTCTACTCTAGATGGCAACATTGGACAGAAAATGCATTGACGTGAGGAGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGTCATCGGCCCTTGATTaGGTTGCATATTCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLSSALD*VAYSCL Trigger: CAAACATGAATATGCAACCAAATCAAGGGCCGATGA...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040924.9 ENSMUST00000092041.11 ENSMUST00000235011.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACACCATCAGGGTAATATaGCTGGTTCATGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDTIRVI*LVHAFW Trigger: CCAGAAGGCATGAACCAGCAATATTACCCTGATGGT...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATTACAAGACAAGGTAAAAACATCCCGCTTCCTCCTTTTCTGTTATTGGAGAGACTGCATATTTaGATTAGAGTCTGCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLITRQGKNIPLPPFLLLERLHI*IRVCYC Trigger: ACAATAGCAGACTCTAATCAAAATATGCAGTCTCTC...CAATAACAGAAAAGGAGGAAGCGGGATGTTTTTACCTTGTCTTGTAATCAGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATTACGGTAATCTTTGTCACCACCAATTAAAAACTTTTACGAAACAGGACGAGAGACTGCATATTTaGATTAGAGTCTGCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: KDYGNLCHHQLKTFTKQDERLHI*IRVCYC Trigger: ACAATAGCAGACTCTAATCAAAATATGCAGTCTCTC...GTCCTGTTTCGTAAAAGTTTTTAATTGGTGGTGACAAAGATTACCGTAATCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040964.13 |
||
| CDS CAA 72 bp | AGCATCTTCTGGATGGCGGCGGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCTGCGAACGCCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SIFWMAAGVISP*PRCLGAANATD Trigger: GTCTGTGGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCCCGCCGCCATCCAGAAGATGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234224.2 ENSMUST00000234524.2 |
||
| CDS CAA 72 bp | GATACCTTCTGGATGGCGGCGGGCGTGATTTCGCCCTaGCCCCGCTGCCTCGGGGCTGCGAACGCCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DTFWMAAGVISP*PRCLGAANATD Trigger: GTCTGTGGCGTTCGCAGCCCCGAGGCAGCGGGGCAAGGGCGAAATCACGCCCGCCGCCATCCAGAAGGTATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234120.2 |
||
| CDS CCA 72 bp | TGGTGCATCATCGGCCCAGGCATCTGGCCGTTCATCTaGTTCTGCATGTGTGGTGCAGGAGGGCCCCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WCIIGPGIWPFI*FCMCGAGGPPP Trigger: GGGTGGGGGCCCTCCTGCACCACACATGCAGAACCAGATGAACGGCCAGATGCCTGGGCCGATGATGCACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040964.13 ENSMUST00000234524.2 |
||
| CDS CAA 72 bp | ATACTGAGGACCTGGACCGCCCTGCGAAGGACCCTGTaGCGGAGGTCTGTAGGGAGGCATCTGTCGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILRTWTALRRTL*RRSVGRHLSLA Trigger: GGCCAGCGACAGATGCCTCCCTACAGACCTCCGCAACAGGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235011.2 |
||
| CDS CAA 90 bp | ATAATTAGGATACTGAGGACCTGGACCGCCCTGCGAAGGACCCTGTaGCGGAGGTCTGTAGGGAGGCATCTGTCGCTGGCCCATCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: IIRILRTWTALRRTL*RRSVGRHLSLAHHV Trigger: CACATGATGGGCCAGCGACAGATGCCTCCCTACAGACCTCCGCAACAGGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235011.2 |
||
| CDS CCA 72 bp | ACCTTGACCCTGAGGATAATTAGGATACTGAGGACCTaGACCGCCCTGCGAAGGACCCTGTTGCGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLTLRIIRILRT*TALRRTLLRRS Trigger: AGACCTCCGCAACAGGGTCCTTCGCAGGGCGGTCCAGGTCCTCAGTATCCTAATTATCCTCAGGGTCAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235011.2 |
||
| CDS CCA 72 bp | ATACCAGGTTTGTATGCAATATCTGCTGATACCTTCTaGATGGCGGCGGGCGTGATTTCGCCCTTGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: IPGLYAISADTF*MAAGVISPLPR Trigger: GCGGGGCAAGGGCGAAATCACGCCCGCCGCCATCCAGAAGGTATCAGCAGATATTGCATACAAACCTGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234120.2 |
||
| CDS CAA 90 bp | CTGGGGTGGGTATCCTTGCTGTGGAGGTGGTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGAGTTTCCATCAGGGTAATATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGWVSLLWRWSLVSV*LLAILGVSIRVILL Trigger: CAGCAATATTACCCTGATGGAAACTCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATACCCACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS CAA 72 bp | GTATCCTTGCTGTGGAGGTGGTCCCTGGTAAGCGTCTaGCTGTTGGCCATACTGGGAGTTTCCATCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VSLLWRWSLVSV*LLAILGVSIRV Trigger: TACCCTGATGGAAACTCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAAGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
||
| CDS CAA 72 bp | TTGCTGTGGAGGTGGTCCCTGGTAAGCGTCTTGCTGTaGGCCATACTGGGAGTTTCCATCAGGGTAATATTG | + |
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Preference number: 6 (lower is better) Translates to: LLWRWSLVSVLL*AILGVSIRVIL Trigger: CAATATTACCCTGATGGAAACTCCCAGTATGGCCAACAGCAAGACGCTTACCAGGGACCACCTCCACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS CCA 72 bp | GTTTCCATCAGGGTAATATTGCTGGTTCATGCCTTCTaGAGGACCTTGTCCACCATGACTGTATTGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VSIRVILLVHAF*RTLSTMTVLVP Trigger: GGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS CAA 90 bp | GTTTCCATCAGGGTAATATTGCTGGTTCATGCCTTCTGGAGGACCTaGTCCACCATGACTGTATTGGTCCCCATAATAGTCTTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSIRVILLVHAFWRT*STMTVLVPIIVFLA Trigger: GGCCAGGAAGACTATTATGGGGACCAATACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092041.11 ENSMUST00000234524.2 |
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| CDS TCA 72 bp | GTAGCAAGGTATACCAGGTTTGTATGCAATATCTGCTaGTACTGCGAGCACTCCGAGGCCTTCCCTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VARYTRFVCNIC*YCEHSEAFPLF Trigger: GAACAAAGGGAAGGCCTCGGAGTGCTCGCAGTATCAGCAGATATTGCATACAAACCTGGTATACCTTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040924.9 ENSMUST00000040964.13 ENSMUST00000092041.11 ENSMUST00000234524.2 |
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