RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRY (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069036

Ensembl transcript IDs: ENSMUST00000091178.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGCTGCTTCTGCTGCTGCTGGTGGTGGTGGTCATGGAACTGCTGTTaGTGCTGGGGGTGGTCATGGAACTGCTGCTTCTGCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: CCFCCCWWWWSWNCC*CWGWSWNCCFCWGW
Trigger: CCACCCCCAGCAGAAGCAGCAGTTCCATGACCACCCCCAGCAGCAACAGCAGTTCCATGACCACCACCACCAGCAGCAGCAGAAGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS TCA 90 bp GGGTGGTCATGGAACTGCTGCTTCTGCTGGGGGTGGTCATGGAACTaGTGCTGCTGCTGCTGGTGGTCATGGAACTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GWSWNCCFCWGWSWN*CCCCWWSWNCCCCC
Trigger: GCAGCAGCAGCAGCAGTTCCATGACCACCAGCAGCAGCAGCATCAGTTCCATGACCACCCCCAGCAGAAGCAGCAGTTCCATGACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp TGGTGGTGGTCATGGAACTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGGTGGTCATGGAACTGCTGTTGCTGCTGGTGGTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: WWWSWNCCCCCCCCC*WWSWNCCCCWWWSW
Trigger: CCATGACCACCACCAGCAGCAACAGCAGTTCCATGACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCATGACCACCACCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp TGCTGGTGGTGGTCATGGAACTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGGTGGTCATGGAACTGCTGTTGCTGCTGGTGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: CWWWSWNCCCCCCCC*CWWSWNCCCCWWWS
Trigger: TGACCACCACCAGCAGCAACAGCAGTTCCATGACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCATGACCACCACCAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp TTCTGCTGGTGGTGGTCATGGAACTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGGTGGTCATGGAACTGCTGTTGCTGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FCWWWSWNCCCCCCC*CCWWSWNCCCCWWW
Trigger: CCACCACCAGCAGCAACAGCAGTTCCATGACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCATGACCACCACCAGCAGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp TGCTTCTGCTGGTGGTGGTCATGGAACTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGGTGGTCATGGAACTGCTGTTGCTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CFCWWWSWNCCCCCC*CCCWWSWNCCCCWW
Trigger: CCACCAGCAGCAACAGCAGTTCCATGACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCATGACCACCACCAGCAGAAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 90 bp TGCTGCTTCTGCTGGTGGTGGTCATGGAACTGCTGCTTCTGCTGGTaGTGGTCATGGAACTGCTGCTTCTGCTGCTGCTGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CCFCWWWSWNCCFCW*WSWNCCFCCCWWWW
Trigger: CCACCACCACCAGCAGCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp TGGTCATGGAACTGCTGTTGCTGCTGGTGGTGGTCATGGAACTGCTaGTCCTGGTGGTGGTGGTGGTGGTCATGGAACTGCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: WSWNCCCCWWWSWNC*SWWWWWWSWNCCCC
Trigger: GCAGCAACAGCAGTTCCATGACCACCACCACCACCACCAGGAGCAGCAGTTCCATGACCACCACCAGCAGCAACAGCAGTTCCATGACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 90 bp TGCTTCTGCTGGTGGTGGTCATGGAACTGCTGCTTCTGCTGGTGGTaGTCATGGAACTGCTGCTTCTGCTGCTGCTGGTGGTGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: CFCWWWSWNCCFCWW*SWNCCFCCCWWWWS
Trigger: TGACCACCACCACCAGCAGCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 90 bp AACTGCTGCTTCTGCTGGTGGTGGTCATGGAACTGCTGCTTCTGCTaGTGGTGGTCATGGAACTGCTGCTTCTGCTGCTGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: NCCFCWWWSWNCCFC*WWSWNCCFCCCWWW
Trigger: CCACCACCAGCAGCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCAGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 90 bp TGCTGGTGGTGGTCATGGAACTGCTGTTGCTGCTGGTGGTGGTCATaGAACTGCTGCTTCTGCTGGTGGTGGTCATGGAACTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CWWWSWNCCCCWWWS*NCCFCWWWSWNCCF
Trigger: GAAGCAGCAGTTCCATGACCACCACCAGCAGAAGCAGCAGTTCCATGACCACCACCAGCAGCAACAGCAGTTCCATGACCACCACCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp CTTTGCTGGTTTTTGGAGTACAGGTGTGCAGCTCTACTCCAGTCTTaGCTGTATGTGATGGCATGTGGGTTCCTGTCCCACTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LCWFLEYRCAALLQS*LYVMACGFLSHCRR
Trigger: CCTTCTGCAGTGGGACAGGAACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAAACCAGCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS TCA 90 bp TTTTGGAGTACAGGTGTGCAGCTCTACTCCAGTCTTGCCTGTATGTaGTGGCATGTGGGTTCCTGTCCCACTGCAGAAGGTTGTACAGTT +
Preference number: 5 (lower is better)
Translates to: FWSTGVQLYSSLACM*WHVGSCPTAEGCTV
Trigger: AACTGTACAACCTTCTGCAGTGGGACAGGAACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 90 bp AACAGGCTGCCAATAAAAGCTTTGCTGGTTTTTGGAGTACAGGTGTaGAGCTCTACTCCAGTCTTGCCTGTATGTGATGGCATGTGGGTT +
Preference number: 5 (lower is better)
Translates to: NRLPIKALLVFGVQV*SSTPVLPVCDGMWV
Trigger: AACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAAACCAGCAAAGCTTTTATTGGCAGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 72 bp AGCTGCTGGTCGTGGAACTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGGTGGTGGTCATGGAAC +
Preference number: 6 (lower is better)
Translates to: SCWSWNCCCCCC*CCCCCWWWSWN
Trigger: GTTCCATGACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCACGACCAGCAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 90 bp CTGCTGCTTCTGCTGCTGCTGGTGGTGGTGGTCATGGAACTGCTGTaGCTGCTGGGGGTGGTCATGGAACTGCTGCTTCTGCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLVVVVMELL*LLGVVMELLLLLGV
Trigger: CACCCCCAGCAGAAGCAGCAGTTCCATGACCACCCCCAGCAGCAACAGCAGTTCCATGACCACCACCACCAGCAGCAGCAGAAGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 72 bp TGGAACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGAGGTGCCCAGTGGGGATATCAACAGGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: WNCCCCCCCCCC*RCPVGISTGCQ
Trigger: TTGGCAGCCTGTTGATATCCCCACTGGGCACCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 72 bp AACTGCTGTTGCTGCTGGTGGTGGTCATGGAACTGCTaGTCCTGGTGGTGGTGGTGGTGGTCATGGAACTGC +
Preference number: 6 (lower is better)
Translates to: NCCCCWWWSWNC*SWWWWWWSWNC
Trigger: GCAGTTCCATGACCACCACCACCACCACCAGGAGCAGCAGTTCCATGACCACCACCAGCAGCAACAGCAGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 72 bp TGGAACTGCTGTTGCTGCTGGTGGTGGTCATGGAACTaGTGCTCCTGGTGGTGGTGGTGGTGGTCATGGAAC +
Preference number: 6 (lower is better)
Translates to: WNCCCCWWWSWN*CSWWWWWWSWN
Trigger: GTTCCATGACCACCACCACCACCACCAGGAGCAGCAGTTCCATGACCACCACCAGCAGCAACAGCAGTTCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 72 bp TGGTCATGGAACTGCTGTTGCTGCTGGGGGTGGTCATaGAACTGCTGCTTCTGCTGGGGGTGGTCATGGAAC +
Preference number: 6 (lower is better)
Translates to: WSWNCCCCWGWS*NCCFCWGWSWN
Trigger: GTTCCATGACCACCCCCAGCAGAAGCAGCAGTTCCATGACCACCCCCAGCAGCAACAGCAGTTCCATGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 72 bp GCTGCTGCTGCTGCTGCTGCTGCTGCAGGTGCCCAGTaGGGATATCAACAGGCTGCCAATAAAAGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAAGAQ*GYQQAANKSFA
Trigger: AGCAAAGCTTTTATTGGCAGCCTGTTGATATCCCCACTGGGCACCTGCAGCAGCAGCAGCAGCAGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 72 bp CTCCTGGTGGTGGTGGTGGTGGTCATGGAACTGCTGTaGCTGCTGGTGGTGGTCATGAAACTGCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLVVVVVVMELL*LLVVVMKLLLL
Trigger: CAGAAGCAGCAGTTTCATGACCACCACCAGCAGCAACAGCAGTTCCATGACCACCACCACCACCACCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 72 bp GAGACTGCCAACCACAGGGCTGTGCTGAGGTGCTCCTaGTATGGTGTATGCTCACCAGTGATGTCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: ETANHRAVLRCS*YGVCSPVMSAV
Trigger: AACAGCTGACATCACTGGTGAGCATACACCATACCAGGAGCACCTCAGCACAGCCCTGTGGTTGGCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS TCA 72 bp ACAGGTGTGCAGCTCTACTCCAGTCTTGCCTGTATGTaGTGGCATGTGGGTTCCTGTCCCACTGCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: TGVQLYSSLACM*WHVGSCPTAEG
Trigger: ACCTTCTGCAGTGGGACAGGAACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 90 bp GCTTTGCTGGTTTTTGGAGTACAGGTGTGCAGCTCTACTCCAGTCTaGCCTGTATGTGATGGCATGTGGGTTCCTGTCCCACTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: ALLVFGVQVCSSTPV*PVCDGMWVPVPLQK
Trigger: CTTCTGCAGTGGGACAGGAACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAAACCAGCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 72 bp GTGGGTTCCTGTCCCACTGCAGAAGGTTGTACAGTTTaGTTGAGGCAACTGCAGGCTGTAAAATGCCACTCC +
Preference number: 6 (lower is better)
Translates to: VGSCPTAEGCTV*LRQLQAVKCHS
Trigger: GGAGTGGCATTTTACAGCCTGCAGTTGCCTCAACAAAACTGTACAACCTTCTGCAGTGGGACAGGAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 72 bp AGCTCTACTCCAGTCTTGCCTGTATGTGATGGCATGTaGGTTCCTGTCCCACTGCAGAAGGTTGTACAGTTT +
Preference number: 6 (lower is better)
Translates to: SSTPVLPVCDGM*VPVPLQKVVQF
Trigger: AAACTGTACAACCTTCTGCAGTGGGACAGGAACCCACATGCCATCACATACAGGCAAGACTGGAGTAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 72 bp GGTTCCTGTCCCACTGCAGAAGGTTGTACAGTTTTGTaGAGGCAACTGCAGGCTGTAAAATGCCACTCCTCT +
Preference number: 6 (lower is better)
Translates to: GSCPTAEGCTVL*RQLQAVKCHSS
Trigger: AGAGGAGTGGCATTTTACAGCCTGCAGTTGCCTCAACAAAACTGTACAACCTTCTGCAGTGGGACAGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CAA 72 bp GTGATGGCATGTGGGTTCCTGTCCCACTGCAGAAGGTaGTACAGTTTTGTTGAGGCAACTGCAGGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: VMACGFLSHCRR*YSFVEATAGCK
Trigger: TTTACAGCCTGCAGTTGCCTCAACAAAACTGTACAACCTTCTGCAGTGGGACAGGAACCCACATGCCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS GCA 72 bp CCAATAAAAGCTTTGCTGGTTTTTGGAGTACAGGTGTaGAGCTCTACTCCAGTCTTGCCTGTATGTGATGGC +
Preference number: 6 (lower is better)
Translates to: PIKALLVFGVQV*SSTPVLPVCDG
Trigger: GCCATCACATACAGGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAAACCAGCAAAGCTTTTATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2
CDS CCA 72 bp TATCAACAGGCTGCCAATAAAAGCTTTGCTGGTTTTTaGAGTACAGGTGTGCAGCTCTACTCCAGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: YQQAANKSFAGF*STGVQLYSSLA
Trigger: GGCAAGACTGGAGTAGAGCTGCACACCTGTACTCCAAAAACCAGCAAAGCTTTTATTGGCAGCCTGTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091178.2