Pregenerated sensors for SRSF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054679Ensembl transcript IDs: ENSMUST00000067864.8, ENSMUST00000108159.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTATTTTACTGATATCTTTCAGAAAGTACCCCTCGCTGCCCGGTaGACCAGGTACAGGCTATGCAATGGCGACATTGCACACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: FYFTDIFQKVPLAAR*TRYRLCNGDIAHTV Trigger: CACTGTGTGTGCAATGTCGCCATTGCATAGCCTGTACCTGGTTCACCGGGCAGCGAGGGGTACTTTCTGAAAGATATCAGTAAAATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR CCA 90 bp | GGCCTGAGCCAACACCCGGCTCTCTTTAAGCAGTTTAAGCAAACATaGATAACAATTTCATGTCAACTGGTCTGTGCTGTTGTGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: GLSQHPALFKQFKQT*ITISCQLVCAVVFK Trigger: TTTGAACACAACAGCACAGACCAGTTGACATGAAATTGTTATCCATGTTTGCTTAAACTGCTTAAAGAGAGCCGGGTGTTGGCTCAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR TCA 90 bp | TCGCCATATAGATTTTACCTTTTCAGATTTCAGAATGCTGTAACTTaGACTAGAATAGACTGGGATACTTCTGTCCTGAGCTTAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: SPYRFYLFRFQNAVT*TRIDWDTSVLSLNR Trigger: TCTGTTTAAGCTCAGGACAGAAGTATCCCAGTCTATTCTAGTTCAAGTTACAGCATTCTGAAATCTGAAAAGGTAAAATCTATATGGCGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR TCA 90 bp | TACTTCAAATATGTAAGGCTTAACATGAGTTTATTTTGTGGAGTCTaGGTGTCCCACACCATAATTTCTAGAGTAGTCTCAAGCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: YFKYVRLNMSLFCGV*VSHTIISRVVSSHS Trigger: TGAATGGCTTGAGACTACTCTAGAAATTATGGTGTGGGACACTCAGACTCCACAAAATAAACTCATGTTAAGCCTTACATATTTGAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACGCGCGCGCGCGTGCGTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCTTTTCTCAAATTCCTaGCTCAGCTTCCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CARARACVHAPECECDGSLFSNS*LSFLSA Trigger: AGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAG...AGACCCATCACACTCACACTCAGGTGCATGCACGCACGCGCGCGCGCGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGACCCCCTCTTTCTCTGTCTCTGTCTCTCTGTCTGTCTCTCTCTCCTGTGCGCGCGCGCGTGCGTaGATGCACCTGAGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: MKTPSFSVSVSLSVSLSCARARA*MHLSVS Trigger: ACTCACACTCAGGTGCATGCACGCACGCGCGCGCGC...ACAGGAGAGAGAGACAGACAGAGAGACAGAGACAGAGAAAGAGGGGGTCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACGCGCGCGCGCGTGCGTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCATGAGTTTATTTTGTaGAGTCTGAGTGTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: CARARACVHAPECECDGSHEFIL*SLSVPH Trigger: GTGTGGGACACTCAGACTCCACAAAATAAACTCATG...AGACCCATCACACTCACACTCAGGTGCATGCACGCACGCGCGCGCGCGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCCTGAGCCAACACCCGGCTCTCTTTAAGCAGTTTAAGCAAACATGGATACTTGGAGCAGAGCTCTaGGGCTCTGCTGGGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TGLSQHPALFKQFKQTWILGAEL*GSAGRS Trigger: GCTCCTCCCAGCAGAGCCGCAGAGCTCTGCTCCAAG...TATCCATGTTTGCTTAAACTGCTTAAAGAGAGCCGGGTGTTGGCTCAGGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR CAA 90 bp | CATACTACAAGTGTGGAAGTCAGAGAGAGTCTGCAGGAGTCACCCTaGTGGGTTCCAGGGTTTGCACTCATTGCCCAGCTAGCTCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: HTTSVEVRESLQESP*WVPGFALIAQLALG Trigger: ACCGAGAGCTAGCTGGGCAATGAGTGCAAACCCTGGAACCCACAAGGGTGACTCCTGCAGACTCTCTCTGACTTCCACACTTGTAGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGGAAGTCAGAGAGAGTCTGCAGGAGTCACCCTTGTGGGTTCCAGGGTTTACCAGGTACAGGCTATaGAATGGCGACATTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SVEVRESLQESPLWVPGFTRYRL*NGDIAH Trigger: GTGTGCAATGTCGCCATTGCATAGCCTGTACCTGGT...AAACCCTGGAACCCACAAGGGTGACTCCTGCAGACTCTCTCTGACTTCCACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTAACCACAGCGAGGTGTaGGAGCTTGGAGCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VHAPECECDGSQNFPSFSNHSEV*ELGAEL Trigger: GAGCTCTGCTCCAAGCTCTCACACCTCGCTGTGGTT...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTAGGGTTTGCACTCATTaGCCAGCTAGCTCTCGGTTG | + |
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Preference number: 2 (lower is better) Translates to: APECECDGSQNFPSFSQIRVCTH*PASSRL Trigger: CAACCGAGAGCTAGCTGGGCAATGAGTGCAAACCCT...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCTGTCTGTCTTCAGGTaGACACGTGCCATACTACAA | + |
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Preference number: 2 (lower is better) Translates to: VHAPECECDGSQNFPSFSLSVFR*TRAILQ Trigger: TTGTAGTATGGCACGTGTGCACCTGAAGACAGACAG...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTCTCGGTTGCCAGGTTTaGATGGTGTGTGGGTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SKFPKLFSNSCLSFLSAALGCQV*MVCGFN Trigger: GTTAAACCCACACACCATCCAAACCTGGCAACCGAG...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCATGTGCTACCTATCTaGCTTGAAGGTGTAGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: VHAPECECDGSQNFPSFSHVLPI*LEGVVS Trigger: CGAAACTACACCTTCAAGCCAGATAGGTAGCACATG...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTCAATTTCATGTCAACTaGTCTGTGCTGTTGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SKFPKLFSNSCLSFLSAAQFHVN*SVLLCS Trigger: TGAACACAACAGCACAGACCAGTTGACATGAAATTG...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCTAGGGCGATTTTATTCCTTCCACATGCCCAAAGTGAAGTGGCTACCATCGGCGAGGTGTGAGAGCTaGGAGCAGAGCTCTGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: KLGRFYSFHMPKVKWLPSARCES*EQSSAA Trigger: AGCCGCAGAGCTCTGCTCCAAGCTCTCACACCTCGC...CGATGGTAGCCACTTCACTTTGGGCATGTGGAAGGAATAAAATCGCCCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR TCA 72 bp | GAAGTGGCTACCATCGGTTCGCATTTCTACGGGCCTTaGAGCACTTTAACCACAGCGAGGTGTGAGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: EVATIGSHFYGP*STLTTARCESL Trigger: CAAGCTCTCACACCTCGCTGTGGTTAAAGTGCTTCAAGGCCCGTAGAAATGCGAACCGATGGTAGCCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR GCA 72 bp | TGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTCCTaGCTCAGCTTCCTGAGTGCTGCTGAGGTGACAGGC | + |
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Preference number: 3 (lower is better) Translates to: WVSKFPKLFSNS*LSFLSAAEVTG Trigger: GCCTGTCACCTCAGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGAGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR CCA 72 bp | GGGCGATTTTATTCCTTCCACATGCCCAAAGTGAAGTaGCTACCATCGGTTCGCATTTCTACGGGCCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: GRFYSFHMPKVK*LPSVRISTGLE Trigger: TTCAAGGCCCGTAGAAATGCGAACCGATGGTAGCCACTTCACTTTGGGCATGTGGAAGGAATAAAATCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTGCATTTCTACGGGCCTaGAAGCACTTTAACCACAGC | + |
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Preference number: 3 (lower is better) Translates to: SKFPKLFSNSCLSFLSAAAFLRA*KHFNHS Trigger: GCTGTGGTTAAAGTGCTTCAAGGCCCGTAGAAATGC...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTAACTGGTCTGTGCTGTaGTGTTCAAAAACAATGAAA | + |
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Preference number: 3 (lower is better) Translates to: SKFPKLFSNSCLSFLSAANWSVL*CSKTMK Trigger: TTTCATTGTTTTTGAACACAACAGCACAGACCAGTT...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR TCA 72 bp | AGATTTTACCTTTTCAGATTTCAGAATGCTGTAACTTaGACTAGAATAGACTGGGATACTTCTGTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RFYLFRFQNAVT*TRIDWDTSVLS Trigger: GCTCAGGACAGAAGTATCCCAGTCTATTCTAGTTCAAGTTACAGCATTCTGAAATCTGAAAAGGTAAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR GCA 90 bp | TGTGCACGCGCGCGCGCGTGCGTGCATGCACCTGAGTGTGAGTGTGATGGGTCTGCTCCAAGGGAGACCTaGCTCTCCCAAACAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: CARARACVHAPECECDGSAPRET*LSQTAP Trigger: TGGGGCTGTTTGGGAGAGGCAGGTCTCCCTTGGAGC...AGACCCATCACACTCACACTCAGGTGCATGCACGCACGCGCGCGCGCGTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR TCA 90 bp | TGTGCACGCGCGCGCGCGTGCGTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAGGTGGCGTTCTTTTaGCTTCATTTGGCCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: CARARACVHAPECECDGSQVAFF*LHLAWC Trigger: GCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTG...AGACCCATCACACTCACACTCAGGTGCATGCACGCACGCGCGCGCGCGTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGGAAGTCAGAGAGAGTCTGCAGGAGTCACCCTTGTGGGTTCCAGGGTTTGGTAACTCCGAGATCTaGAGTGGGACCGGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SVEVRESLQESPLWVPGFGNSEI*SGTGDG Trigger: CCCATCTCCGGTCCCACTCCAGATCTCGGAGTTACC...AAACCCTGGAACCCACAAGGGTGACTCCTGCAGACTCTCTCTGACTTCCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR GCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCCGATCCCCCATCGCTaGAGGCCAGCTAGGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VHAPECECDGSQNFPSFSPIPHR*RPARCS Trigger: GGAGCACCTAGCTGGCCTGCAGCGATGGGGGATCGG...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | AAGCTAGGGCGATTTTATTCCTTCCACATGCCCAAAGTGAAGTGGCTACCATCGCGAACAGGGAGGTGTTaGGGGGCCTGGTGTAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KLGRFYSFHMPKVKWLPSRTGRC*GAWCSE Trigger: CTCGCTACACCAGGCCCCCCAACACCTCCCTGTTCG...CGATGGTAGCCACTTCACTTTGGGCATGTGGAAGGAATAAAATCGCCCTAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR CAA 72 bp | AGTGTGGAAGTCAGAGAGAGTCTGCAGGAGTCACCCTaGTGGGTTCCAGGGTTTGCACTCATTGCCCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: SVEVRESLQESP*WVPGFALIAQL Trigger: TAGCTGGGCAATGAGTGCAAACCCTGGAACCCACAAGGGTGACTCCTGCAGACTCTCTCTGACTTCCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR TCA 90 bp | ACAGGCCTGAGCCAACACCCGGCTCTCTTTAAGCAGTTTAAGCAAACATGGATACGTCTGCGACGTTCCTaGCGAACAGGGAGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGLSQHPALFKQFKQTWIRLRRS*RTGRCW Trigger: CCAACACCTCCCTGTTCGTCAGGAACGTCGCAGACG...TATCCATGTTTGCTTAAACTGCTTAAAGAGAGCCGGGTGTTGGCTCAGGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR TCA 90 bp | ATGAAGACCCCCTCTTTCTCTGTCTCTGTCTCTCTGTCTGTCTCTCTCTCCTGTGAGCCAGTCTGCTTTTaGGGCGAGCGTGACTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: MKTPSFSVSVSLSVSLSCEPVCF*GERDCD Trigger: ATCACAGTCACGCTCGCCTCAAAAGCAGACTGGCTC...ACAGGAGAGAGAGACAGACAGAGAGACAGAGACAGAGAAAGAGGGGGTCTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTGCGATCTCCTCTGGCTaGGGCTTCTGGATCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VHAPECECDGSQNFPSFSAISSG*GFWISC Trigger: ACAGGAGATCCAGAAGCCCCAGCCAGAGGAGATCGC...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTCTTCTGGATCTCCTGTaGTCACTCGGGGAGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SKFPKLFSNSCLSFLSAALLDLL*SLGEHR Trigger: CCTGTGCTCCCCGAGTGACCACAGGAGATCCAGAAG...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR GCA 90 bp | TCAAAATTTCCCAAGCTTTTCTCAAATTCCTGCCTCAGCTTCCTGAGTGCTGCTACGCTCTGGGAGACTTaGATGGGGATCTTGCTATGG | + |
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Preference number: 4 (lower is better) Translates to: SKFPKLFSNSCLSFLSAATLWET*MGILLW Trigger: CCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGT...AGCAGCACTCAGGAAGCTGAGGCAGGAATTTGAGAAAAGCTTGGGAAATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTTCTTTTGACTTCATTTaGCCTGGTGCTGGTGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: VHAPECECDGSQNFPSFSSFDFI*PGAGGV Trigger: GACGCCACCAGCACCAGGCCAAATGAAGTCAAAAGA...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCCTGAGCCAACACCCGGCTCTCTTTAAGCAGTTTAAGCAAACATGGATAATCTTGATCGTCCTCTaGATCCAGAATTCCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TGLSQHPALFKQFKQTWIILIVL*IQNSFS Trigger: CGAGAAGGAATTCTGGATCCAGAGGACGATCAAGAT...TATCCATGTTTGCTTAAACTGCTTAAAGAGAGCCGGGTGTTGGCTCAGGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTATGGGGATCTTGCTATaGAGTCACAGTGTCGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VHAPECECDGSQNFPSFSMGILL*SHSVVH Trigger: ATGGACGACACTGTGACTCCATAGCAAGATCCCCAT...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR GCA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTCTTGCATGGGGATCTTaGTATGGAGTCACAGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: APECECDGSQNFPSFSQILAWGS*YGVTVS Trigger: CGACACTGTGACTCCATAGCAAGATCCCCATGCAAG...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTTCTGGGAGACTTGCATaGGGATCTTGCTATGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: APECECDGSQNFPSFSQISGRLA*GSCYGV Trigger: GACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGA...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CCA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTTCGACTTGGACCTTTTaGGTAAGGACTTGGATCTTG | + |
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Preference number: 4 (lower is better) Translates to: APECECDGSQNFPSFSQISTWTF*VRTWIL Trigger: CAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGA...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| 3UTR CAA 72 bp | ATCTGGCTTGAAGGTGTAGTTTCGACCTTAAATGTTTaGCATACATTTAATGTGCACCTGTGTGTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: IWLEGVVSTLNV*HTFNVHLCVSV Trigger: GACAGACACACACAGGTGCACATTAAATGTATGCAAAACATTTAAGGTCGAAACTACACCTTCAAGCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS GCA 90 bp | GGCTGTCCGAGTGCCTCCGGTCTCTTCCCCATGAAGAACTCCGGCTaGGCGATCTCCTCTGGCTGGGGCTTCTGGATCTCCTGTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: GCPSASGLFPMKNSG*AISSGWGFWISCGH Trigger: GTGACCACAGGAGATCCAGAAGCCCCAGCCAGAGGAGATCGCGCAGCCGGAGTTCTTCATGGGGAAGAGACCGGAGGCACTCGGACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 90 bp | GGTCTCTTCCCCATGAAGAACTCCGGCTGCGCGATCTCCTCTGGCTaGGGCTTCTGGATCTCCTGTGGTCACTCGGGGAGCACAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GLFPMKNSGCAISSG*GFWISCGHSGSTGG Trigger: GCCACCTGTGCTCCCCGAGTGACCACAGGAGATCCAGAAGCCCCAGCCAGAGGAGATCGCGCAGCCGGAGTTCTTCATGGGGAAGAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS TCA 90 bp | CCGAGACTCTTTCAGGCTGTCCGAGTGCCTCCGGTCTCTTCCCCATaGAGAACTCCGGCTGCGCGATCTCCTCTGGCTGGGGCTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PRLFQAVRVPPVSSP*RTPAARSPLAGASG Trigger: TCCAGAAGCCCCAGCCAGAGGAGATCGCGCAGCCGGAGTTCTTCATGGGGAAGAGACCGGAGGCACTCGGACAGCCTGAAAGAGTCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 90 bp | TGGGGCGGCGACTGTAGAAGTCCAATGGGATATAAACGTCTACTATaGGGCCATATCGGCCAAACTCACGGCGCAAGTCCTCGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: WGGDCRSPMGYKRLL*GHIGQTHGASPRAW Trigger: CCAGGCCCGAGGACTTGCGCCGTGAGTTTGGCCGATATGGCCCCATAGTAGACGTTTATATCCCATTGGACTTCTACAGTCGCCGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108159.2 |
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| CDS-3UTR CAA 90 bp | AAGCTAGGGCGATTTTATTCCTTCCACATGCCCAAAGTGAAGTGGCTACCATCGGCGCGAGCACAGACCTaGCCACTGCCCGGGCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: KLGRFYSFHMPKVKWLPSARAQT*PLPGPL Trigger: TAGAGGCCCGGGCAGTGGCAAGGTCTGTGCTCGCGC...CGATGGTAGCCACTTCACTTTGGGCATGTGGAAGGAATAAAATCGCCCTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS CCA 90 bp | TGCATGGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGTCTaGACTTTGCTCCGGAGCCAGTCTGCTTTTGAGGCGAGCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CMGILLWSHSVVHVV*TLLRSQSAFEASVT Trigger: AGTCACGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | AGACTTGCATGGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTaGTCTGGACTTTGCTCCGGAGCCAGTCTGCTTTTGAGGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLAWGSCYGVTVSSM*SGLCSGASLLLRRA Trigger: CGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | CAGAACTGGTGTACGCTCTGGGAGACTTGCATGGGGATCTTGCTATaGAGTCACAGTGTCGTCCATGTGGTCTGGACTTTGCTCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNWCTLWETCMGILL*SHSVVHVVWTLLRS Trigger: GCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS GCA 90 bp | CTTGATCGTCCTCTGGATCCAGAATTCCTTCTCGGTGTCCGTGACTaGCTCAGGGAGGTAGACTGCCTGGGTAGCGATTTGGAACGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LDRPLDPEFLLGVRD*LREVDCLGSDLERD Trigger: ATCTCGTTCCAAATCGCTACCCAGGCAGTCTACCTCCCTGAGGCAGTCACGGACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS TCA 90 bp | TGTCGTCCATGTGGTCTGGACTTTGCTCCGGAGCCAGTCTGCTTTTaGGGCGAGCGTGACTGTGATTTCTCCATCGACTTGGACCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CRPCGLDFAPEPVCF*GERDCDFSIDLDLL Trigger: CAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 90 bp | TCGACTTGGACCTTTTGGGTAAGGACTTGGATCTTGATCGTCCTCTaGATCCAGAATTCCTTCTCGGTGTCCGTGACTGCCTCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STWTFWVRTWILIVL*IQNSFSVSVTASGR Trigger: CCTCCCTGAGGCAGTCACGGACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 90 bp | CTGTGTCTTCGATCCAGAACTGGTGTACGCTCTGGGAGACTTGCATaGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLRSRTGVRSGRLA*GSCYGVTVSSMWSG Trigger: TCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS-3UTR CAA 90 bp | AGTGTGGAAGTCAGAGAGAGTCTGCAGGAGTCACCCTTGTGGGTTCCAGGGTTTTACGCTCTGGGAGACTaGCATGGGGATCTTGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SVEVRESLQESPLWVPGFYALGD*HGDLAM Trigger: CATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTA...AAACCCTGGAACCCACAAGGGTGACTCCTGCAGACTCTCTCTGACTTCCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS GCA 90 bp | TTGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTCTGGGAGACTTaGATGGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVSSIQNWCTLWET*MGILLWSHSVVHVV Trigger: GACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | ACCGGAGATGGGAGTGTTTTGTTGTCTGTGTCTTCGATCCAGAACTaGTGTACGCTCTGGGAGACTTGCATGGGGATCTTGCTATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGDGSVLLSVSSIQN*CTLWETCMGILLWS Trigger: ACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAACAAAACACTCCCATCTCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | CAGTCTGCTTTTGAGGCGAGCGTGACTGTGATTTCTCCATCGACTTaGACCTTTTGGGTAAGGACTTGGATCTTGATCGTCCTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: QSAFEASVTVISPST*TFWVRTWILIVLWI Trigger: GATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCTCGCCTCAAAAGCAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | AGTGTTTTGTTGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTCTaGGAGACTTGCATGGGGATCTTGCTATGGAGTCACAGTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLLSVSSIQNWCTL*ETCMGILLWSHSVV Trigger: GACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAACAAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | GTGACTGTGATTTCTCCATCGACTTGGACCTTTTGGGTAAGGACTTaGATCTTGATCGTCCTCTGGATCCAGAATTCCTTCTCGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTVISPSTWTFWVRT*ILIVLWIQNSFSVS Trigger: GGACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 90 bp | TTTGAGGCGAGCGTGACTGTGATTTCTCCATCGACTTGGACCTTTTaGGTAAGGACTTGGATCTTGATCGTCCTCTGGATCCAGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FEASVTVISPSTWTF*VRTWILIVLWIQNS Trigger: GGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCTCGCCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS-3UTR CAA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTACAGGTGGCGTTCTTTaGACTTCATTTGGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: APECECDGSQNFPSFSQITGGVL*TSFGLV Trigger: CACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGT...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS-3UTR CAA 90 bp | GCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTCAAATTGTAAGGACTTGGATCTaGATCGTCCTCTGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APECECDGSQNFPSFSQIVRTWI*IVLWIQ Trigger: CTGGATCCAGAGGACGATCAAGATCCAAGTCCTTAC...AATTTGAGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGCACCTGAGTGTGAGTGTGATGGGTCTCAAAATTTCCCAAGCTTTTCTATCGACTTGGACCTTTaGGGTAAGGACTTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHAPECECDGSQNFPSFSIDLDL*GKDLDL Trigger: AAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGAT...AGAAAAGCTTGGGAAATTTTGAGACCCATCACACTCACACTCAGGTGCATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS CCA 72 bp | CCCATGAAGAACTCCGGCTGCGCGATCTCCTCTGGCTaGGGCTTCTGGATCTCCTGTGGTCACTCGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PMKNSGCAISSG*GFWISCGHSGS Trigger: GCTCCCCGAGTGACCACAGGAGATCCAGAAGCCCCAGCCAGAGGAGATCGCGCAGCCGGAGTTCTTCATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS GCA 72 bp | AGTGCCTCCGGTCTCTTCCCCATGAAGAACTCCGGCTaGGCGATCTCCTCTGGCTGGGGCTTCTGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SASGLFPMKNSG*AISSGWGFWIS Trigger: GGAGATCCAGAAGCCCCAGCCAGAGGAGATCGCGCAGCCGGAGTTCTTCATGGGGAAGAGACCGGAGGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS GCA 72 bp | GACCGCCTGTGCCGAGACTCTTTCAGGCTGTCCGAGTaGCTCCGGTCTCTTCCCCATGAAGAACTCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DRLCRDSFRLSE*LRSLPHEELRL Trigger: CAGCCGGAGTTCTTCATGGGGAAGAGACCGGAGGCACTCGGACAGCCTGAAAGAGTCTCGGCACAGGCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS TCA 72 bp | CCTGTGGTCACTCGGGGAGCACAGGTGGCGTTCTTTTaGCTTCATTTGGCCTGGTGCTGGTGGCGTCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PVVTRGAQVAFF*LHLAWCWWRLR Trigger: TCGCAGACGCCACCAGCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS CCA 72 bp | CTCGGGGAGCACAGGTGGCGTTCTTTTGACTTCATTTaGCCTGGTGCTGGTGGCGTCTGCGACGTTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGEHRWRSFDFI*PGAGGVCDVPD Trigger: GTCAGGAACGTCGCAGACGCCACCAGCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS CAA 72 bp | TCCTGTGGTCACTCGGGGAGCACAGGTGGCGTTCTTTaGACTTCATTTGGCCTGGTGCTGGTGGCGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SCGHSGSTGGVL*TSFGLVLVASA Trigger: CGCAGACGCCACCAGCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS CAA 90 bp | TTCTGGATCTCCTGTGGTCACTCGGGGAGCACAGGTGGCGTTCTTTaGACTTCATTTGGCCTGGTGCTGGTGGCGTCTGCGACGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FWISCGHSGSTGGVL*TSFGLVLVASATFL Trigger: CAGGAACGTCGCAGACGCCACCAGCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGGAGATCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
||
| CDS CAA 72 bp | CTATGGAGTCACAGTGTCGTCCATGTGGTCTGGACTTaGCTCCGGAGCCAGTCTGCTTTTGAGGCGAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWSHSVVHVVWT*LRSQSAFEASV Trigger: CACGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 72 bp | CTTCTGGATCTCCTGTGGTCACTCGGGGAGCACAGGTaGCGTTCTTTTGACTTCATTTGGCCTGGTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLDLLWSLGEHR*RSFDFIWPGAG Trigger: ACCAGCACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGGAGATCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067864.8 |
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| CDS CAA 90 bp | GGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGTCTGGACTTaGCTCCGGAGCCAGTCTGCTTTTGAGGCGAGCGTGACTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: GILLWSHSVVHVVWT*LRSQSAFEASVTVI Trigger: AATCACAGTCACGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 90 bp | GGTGGTAACTCCGAGATCTGGAGTGGGACCGGAGATGGGAGTGTTTaGTTGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGNSEIWSGTGDGSV*LSVSSIQNWCTLWE Trigger: CTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAACAAAACACTCCCATCTCCGGTCCCACTCCAGATCTCGGAGTTACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS TCA 72 bp | TGTGGTCTGGACTTTGCTCCGGAGCCAGTCTGCTTTTaGGGCGAGCGTGACTGTGATTTCTCCATCGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: CGLDFAPEPVCF*GERDCDFSIDL Trigger: CAAGTCGATGGAGAAATCACAGTCACGCTCGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 72 bp | ATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGTCTaGACTTTGCTCCGGAGCCAGTCTGCTTTTGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ILLWSHSVVHVV*TLLRSQSAFEA Trigger: CGCCTCAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 72 bp | TGGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTaGTCTGGACTTTGCTCCGGAGCCAGTCTGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WGSCYGVTVSSM*SGLCSGASLLL Trigger: CAAAAGCAGACTGGCTCCGGAGCAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CCA 72 bp | CGATCCAGAACTGGTGTACGCTCTGGGAGACTTGCATaGGGATCTTGCTATGGAGTCACAGTGTCGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSRTGVRSGRLA*GSCYGVTVSSM Trigger: CATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS GCA 72 bp | TCTTCGATCCAGAACTGGTGTACGCTCTGGGAGACTTaGATGGGGATCTTGCTATGGAGTCACAGTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSIQNWCTLWET*MGILLWSHSVV Trigger: GACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | TGTACGCTCTGGGAGACTTGCATGGGGATCTTGCTATaGAGTCACAGTGTCGTCCATGTGGTCTGGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CTLWETCMGILL*SHSVVHVVWTL Trigger: CAAAGTCCAGACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 72 bp | GTCTTCGATCCAGAACTGGTGTACGCTCTGGGAGACTaGCATGGGGATCTTGCTATGGAGTCACAGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VFDPELVYALGD*HGDLAMESQCR Trigger: ACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 72 bp | GAGATCTGGAGTGGGACCGGAGATGGGAGTGTTTTGTaGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EIWSGTGDGSVL*SVSSIQNWCTL Trigger: GAGCGTACACCAGTTCTGGATCGAAGACACAGACAACAAAACACTCCCATCTCCGGTCCCACTCCAGATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 72 bp | TCCTGTGGTCACTCGGGGAGCACAGGTGGCGTTCTTTaGACTTCATTTGGCCTGGTGTTTTGCGATCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SCGHSGSTGGVL*TSFGLVFCDHL Trigger: AAGGTGATCGCAAAACACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108159.2 |
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| CDS CAA 90 bp | GTTGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTCTGGGAGACTaGCATGGGGATCTTGCTATGGAGTCACAGTGTCGTCCATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVCVFDPELVYALGD*HGDLAMESQCRPCG Trigger: ACCACATGGACGACACTGTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 90 bp | TTCTGGATCTCCTGTGGTCACTCGGGGAGCACAGGTGGCGTTCTTTaGACTTCATTTGGCCTGGTGTTTTGCGATCACCTTGTGCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: FWISCGHSGSTGGVL*TSFGLVFCDHLVQT Trigger: AGTTTGCACAAGGTGATCGCAAAACACCAGGCCAAATGAAGTCAAAAGAACGCCACCTGTGCTCCCCGAGTGACCACAGGAGATCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | ACCTTTTGGGTAAGGACTTGGATCTTGATCGTCCTCTaGATCCAGAATTCCTTCTCGGTGTCCGTGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFWVRTWILIVL*IQNSFSVSVTA Trigger: GGCAGTCACGGACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | TTGTCTGTGTCTTCGATCCAGAACTGGTGTACGCTCTaGGAGACTTGCATGGGGATCTTGCTATGGAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSVSSIQNWCTL*ETCMGILLWSH Trigger: GTGACTCCATAGCAAGATCCCCATGCAAGTCTCCCAGAGCGTACACCAGTTCTGGATCGAAGACACAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | GACTGTAGAAGTCCAATGGGATATAAACGTCTACTATaGGGCCATATCGGCCAAACTCACGGCGCAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DCRSPMGYKRLL*GHIGQTHGASP Trigger: AGGACTTGCGCCGTGAGTTTGGCCGATATGGCCCCATAGTAGACGTTTATATCCCATTGGACTTCTACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108159.2 |
||
| CDS CAA 90 bp | GTGATTTCTCCATCGACTTGGACCTTTTGGGTAAGGACTTGGATCTaGATCGTCCTCTGGATCCAGAATTCCTTCTCGGTGTCCGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: VISPSTWTFWVRTWI*IVLWIQNSFSVSVT Trigger: AGTCACGGACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CAA 90 bp | CGTGACTGTGATTTCTCCATCGACTTGGACCTTTTGGGTAAGGACTaGGATCTTGATCGTCCTCTGGATCCAGAATTCCTTCTCGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RDCDFSIDLDLLGKD*DLDRPLDPEFLLGV Trigger: GACACCGAGAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | AGCGTGACTGTGATTTCTCCATCGACTTGGACCTTTTaGGTAAGGACTTGGATCTTGATCGTCCTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SVTVISPSTWTF*VRTWILIVLWI Trigger: GATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | TTTGAGGCGAGCGTGACTGTGATTTCTCCATCGACTTaGACCTTTTGGGTAAGGACTTGGATCTTGATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FEASVTVISPST*TFWVRTWILIV Trigger: GACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCTCGCCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CAA 72 bp | GAGCGTGACTGTGATTTCTCCATCGACTTGGACCTTTaGGGTAAGGACTTGGATCTTGATCGTCCTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERDCDFSIDLDL*GKDLDLDRPLD Trigger: ATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATCACAGTCACGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
||
| CDS CCA 72 bp | ATTTCTCCATCGACTTGGACCTTTTGGGTAAGGACTTaGATCTTGATCGTCCTCTGGATCCAGAATTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISPSTWTFWVRT*ILIVLWIQNSF Trigger: GAAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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| CDS CAA 72 bp | GATTTCTCCATCGACTTGGACCTTTTGGGTAAGGACTaGGATCTTGATCGTCCTCTGGATCCAGAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DFSIDLDLLGKD*DLDRPLDPEFL Trigger: AAGGAATTCTGGATCCAGAGGACGATCAAGATCCAAGTCCTTACCCAAAAGGTCCAAGTCGATGGAGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067864.8 ENSMUST00000108159.2 |
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