Pregenerated sensors for SRSF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055436Ensembl transcript IDs: ENSMUST00000069025.14, ENSMUST00000072875.15, ENSMUST00000121326.8, ENSMUST00000126716.9, ENSMUST00000137444.8, ENSMUST00000140491.8, ENSMUST00000147304.3, ENSMUST00000198705.5
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTaGTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: DACSCSSVLKQQLHS*LITQMDVTMAMLVT Trigger: GGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR GCA 90 bp | ACTGAGGATCATAGACAGAGACAATCCATGCCTGCTGGAGATGCATaGAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TEDHRQRQSMPAGDA*SCSSVLKQQLHSCL Trigger: CAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATGATCCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR CAA 90 bp | CCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTaGCACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATG | + |
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Preference number: 2 (lower is better) Translates to: PAGDACSCSSVLKQQ*HSCLITQMDVTMAM Trigger: CATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACCAGCTGCTACATGATTCAATTTGGGATCAACAGTACTCATAAGTTTCAAGGAACAGCGCCAATCTaGGTAAGTGGGTTGGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: KTSCYMIQFGINSTHKFQGTAPI*VSGLGV Trigger: TACCCCCAACCCACTTACCCAGATTGGCGCTGTTCC...TTGAAACTTATGAGTACTGTTGATCCCAAATTGAATCATGTAGCAGCTGGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
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| 3UTR-3UTR TCA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATCTGTATACACCTAGGTaGGATGAACACACACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHLYTPR*DEHTQH Trigger: ATGCTGTGTGTGTTCATCTCACCTAGGTGTATACAG...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGGACAGAGACAATCCATaGCTGCTGGAGATGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: KAHEGQFKMHHHFLFNSEDRDNP*LLEMHA Trigger: TGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTC...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCTAGAAATATTCTAAGTGAACGCACTGAGGATCATAGACAGAGACAACATGCCTGCTGGAGATaGATGCAGCTGTTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SNSRNILSERTEDHRQRQHACWR*MQLFIC Trigger: ACAGATGAACAGCTGCATGCATCTCCAGCAGGCATG...TTGTCTCTGTCTATGATCCTCAGTGCGTTCACTTAGAATATTTCTAGAGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGCTGTATACACCTAGGTaGGATGAACACACACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KAHEGQFKMHHHFLFNSELYTPR*DEHTQH Trigger: ATGCTGTGTGTGTTCATCTCACCTAGGTGTATACAG...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGGACAGAGACAATCCATaGCTGCTGGAGATGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: KCDQRHAILERQISVISVDRDNP*LLEMHA Trigger: TGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTC...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTAGTCTCATCAGGAATAACTCAATATGTACAGGGCACTTAAGAGAAACTAAGAAAACTGTTGGGTaGTATTTTCAGCAGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLSLIRNNSICTGHLRETKKTVG*YFQQGL Trigger: CAGGCCCTGCTGAAAATACCACCCAACAGTTTTCTT...AGTTTCTCTTAAGTGCCCTGTACATATTGAGTTATTCCTGATGAGACTAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140491.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTAGTCTCATCAGGAATAACTCAATATGTACAGGGCACTTAAGAGAAACTGCAGAAGAAAACTGTTaGGTGGTATTTTCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLSLIRNNSICTGHLRETAEENC*VVFSAG Trigger: CCCTGCTGAAAATACCACCCAACAGTTTTCTTCTGC...AGTTTCTCTTAAGTGCCCTGTACATATTGAGTTATTCCTGATGAGACTAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140491.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGACGTTTGGGGTAACATaGAATCAGTGCATTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: KCDQRHAILERQISVISVTFGVT*NQCIPY Trigger: GTAGGGAATGCACTGATTGCATGTTACCCCAAACGT...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| 3UTR GCA 72 bp | GTGAACGCACTGAGGATCATAGACAGAGACAATCCATaGCTGCTGGAGATGCATGCAGCTGTTCATCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VNALRIIDRDNP*LLEMHAAVHLC Trigger: ACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATGATCCTCAGTGCGTTCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR GCA 72 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATaGAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: HRQRQSMPAGDA*SCSSVLKQQLH Trigger: GTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGGTGTTCTGAAGCCATaGGTAATGTGCAGCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: IHACWRCMQLFICVKAAVGVLKP*VMCSCI Trigger: TATACAGCTGCACATTACCAATGGCTTCAGAACACC...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| 3UTR CCA 72 bp | GCTGCTTCAAATATGTACAGGGCACTTAAGAGAAACTaGATAAGCTGCAGAAGAAAACTGTTGGGTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: AASNMYRALKRN*ISCRRKLLGGI Trigger: AATACCACCCAACAGTTTTCTTCTGCAGCTTATCCAGTTTCTCTTAAGTGCCCTGTACATATTTGAAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGGGTGTTCTGAAGCCATaGGTAATGTGCAGCTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: KAHEGQFKMHHHFLFNSEGVLKP*VMCSCI Trigger: TATACAGCTGCACATTACCAATGGCTTCAGAACACC...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGCGCGCTGGGGACCACTaGCGTGCTGCTCATGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: HSCLITQMDVTMAMLVTRRAGDH*RAAHGA Trigger: CGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCG...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGGTGACCGCCTGTGTCTaGAGGATGAGGGGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSCLITQMDVTMAMLVTRVTACV*RMRGSS Trigger: GGAGGACCCCCTCATCCTCCAGACACAGGCGGTCAC...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGGGAGACTGGCAAAGGTaGGTCATCCGGCGGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: HSCLITQMDVTMAMLVTRGDWQR*VIRREE Trigger: CTCTTCCCGCCGGATGACTCACCTTTGCCAGTCTCC...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAAGGGCTCGTCGGTCCTaGGGTCCCGGGAGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTRARRS*GPGSWR Trigger: CCGCCAGCTCCCGGGACCGCAGGACCGACGAGCCCT...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACGCGCTGGGGACCACTaGCGTGCTGCTCATGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTRAGDH*RAAHGA Trigger: CGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | TTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGTGCTCGGAGACTGGCAAAGGTaGGTCATCCGGCGGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LSHEPNVSKHSRFSRGVLGDWQR*VIRREE Trigger: CTCTTCCCGCCGGATGACTCACCTTTGCCAGTCTCC...GAGCACACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
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| CDS-3UTR CCA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGGGAACAGCGCCAATCTaGGTAAGTGGGTTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HSCLITQMDVTMAMLVTRGTAPI*VSGLGV Trigger: TACCCCCAACCCACTTACCCAGATTGGCGCTGTTCC...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGTGACCGCCTGTGTCTaGAGGATGAGGGGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVVTACV*RMRGSS Trigger: GGAGGACCCCCTCATCCTCCAGACACAGGCGGTCAC...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCGGAGACTGGCAAAGGTaGGTCATCCGGCGGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSGDWQR*VIRREE Trigger: CTCTTCCCGCCGGATGACTCACCTTTGCCAGTCTCC...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACCGCTCGGAGACACGTTaGTCACCTGGATCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNRSETR*SPGSPR Trigger: CCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCG...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTCGCTCGGAGACACGTTaGTCACCTGGATCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGRSETR*SPGSPR Trigger: CCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCG...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
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| CDS-3UTR CCA 90 bp | AGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATGCATCTGCTCTGAGCTaGCGCTCGGAGACACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RCMQLFICVKAAVAQLLDASALS*RSETRW Trigger: CCAACGTGTCTCCGAGCGCCAGCTCAGAGCAGATGC...ATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACGGCAGGATCAAGAGCTaGAGCTCCCAACGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNGRIKS*SSQRSQ Trigger: CTGGCTGCGTTGGGAGCTCCAGCTCTTGATCCTGCC...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATGGCAGGATCAAGAGCTaGAGCTCCCAACGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RCMQLFICVKAAVAQLLDGRIKS*SSQRSQ Trigger: CTGGCTGCGTTGGGAGCTCCAGCTCTTGATCCTGCC...ATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAGTGACCGCCTGTGTCTaGAGGATGAGGGGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTVTACV*RMRGSS Trigger: GGAGGACCCCCTCATCCTCCAGACACAGGCGGTCAC...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGCTCTGGCTTTGGATGTaGTCCTTGACCTTCTACCCC | + |
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Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVLWLWM*SLTFYP Trigger: GGGGTAGAAGGTCAAGGAGCACATCCAAAGCCAGAG...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTTCTTCTCTCTCTGCTTaGACTCCGAGAGCGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVSSLSA*TPRASG Trigger: GCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGA...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAGCATCTGCTCTGAGCTaGCGCTCGGAGACACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTASALS*RSETRW Trigger: CCAACGTGTCTCCGAGCGCCAGCTCAGAGCAGATGC...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | ACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGCATCTGCTCTGAGCTaGCGCTCGGAGACACGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TRFLSHEPNVSKHSRFSRASALS*RSETRW Trigger: CCAACGTGTCTCCGAGCGCCAGCTCAGAGCAGATGC...CCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
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| CDS-3UTR CCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGGAACAGCGCCAATCTaGGTAAGTGGGTTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVGTAPI*VSGLGV Trigger: TACCCCCAACCCACTTACCCAGATTGGCGCTGTTCC...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTCCCGAGTCACCTGTTTaGCGTCTTTGTCACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVPESPV*RLCHSQ Trigger: CTGAGAGTGACAAAGACGTCAAACAGGTGACTCGGG...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGAGAGCGTCTGGCTGTaGTGTAGCTTTTTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVESVWL*CSFLVE Trigger: CTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTC...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACGGAACAGCGCCAATCTaGGTAAGTGGGTTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNGTAPI*VSGLGV Trigger: TACCCCCAACCCACTTACCCAGATTGGCGCTGTTCC...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATCCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DACSCSSVLKQQLHSCLIHSESV*LCCSFL Trigger: CAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTG...GATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGCCTCGAGCGAGATCTTaGTCTCGAATGTCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVPRARS*SRMSSL Trigger: AAGAGAAGACATTCGAGATCAAGATCTCGCTCGAGG...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACCCCGAGTCACCTGTTTaGCGTCTTTGTCACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNPESPV*RLCHSQ Trigger: CTGAGAGTGACAAAGACGTCAAACAGGTGACTCGGG...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACGAGAGCGTCTGGCTGTaGTGTAGCTTTTTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNESVWL*CSFLVE Trigger: CTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTC...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSHSESV*LCCSFL Trigger: CAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTG...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTATGTCTTCTTCGTGGTaGTCATCCCCGTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHACWRCMQLFICVKAAVMSSSW*SSPFTL Trigger: CAAAGTGAACGGGGATGATCACCACGAAGAAGACAT...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACTCTGGCTTTGGATGTaGTCCTTGACCTTCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTLWLWM*SLTFYP Trigger: GGGGTAGAAGGTCAAGGAGCACATCCAAAGCCAGAG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAGAGAGCGTCTGGCTGTaGTGTAGCTTTTTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTESVWL*CSFLVE Trigger: CTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTC...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAAACGTGCAAACTaGTTGCACTCCGAGAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTHKRAN*LHSESV Trigger: GACGCTCTCGGAGTGCAAGCAGTTTGCACGTTTGTG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069025.14 |
||
| CDS-3UTR CCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGCGCTCGGAGACACGTTaGTCACCTGGATCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KAHEGQFKMHHHFLFNSERSETR*SPGSPR Trigger: CCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCG...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTCAAAAGCTGTTTTATGAACAACGACTCGTGTCGGCTGCTTCAAATATGCGCTCGGAGACACGTTaGTCACCTGGATCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NFQKLFYEQRLVSAASNMRSETR*SPGSPR Trigger: CCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCG...CATATTTGAAGCAGCCGACACGAGTCGTTGTTCATAAAACAGCTTTTGAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
||
| CDS-3UTR CCA 90 bp | CTCATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCGCATCTGCTCTGAGCTaGCGCTCGGAGACACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIRNNSCTRFLSHEPNVSASALS*RSETRW Trigger: CCAACGTGTCTCCGAGCGCCAGCTCAGAGCAGATGC...GCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
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| CDS-3UTR CCA 90 bp | CATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGTGCTCTCAACTGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HEPNVSKHSRFSRGVLSTAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...AGTTGAGAGCACACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGAACTCCTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLITQMDVTMAMLVTRNSFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGGAGTT...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGGGCAGGATCAAGAGCTaGAGCTCCCAACGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAHEGQFKMHHHFLFNSEGRIKS*SSQRSQ Trigger: CTGGCTGCGTTGGGAGCTCCAGCTCTTGATCCTGCC...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACTTCTACTCCTGGATTTaGAGTGTGACCGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNFYSWI*SVTASL Trigger: CAAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAA...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACATCTCCTTCTACTCCTaGATTTGGAGTGTGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNISFYS*IWSVTA Trigger: GGCGGTCACACTCCAAATCCAGGAGTAGAAGGAGAT...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGAGATCGTCTCCGTCTTaGACTTTTGGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVRSSPS*TFGSPS Trigger: AGAAGGAGATCCAAAAGTCCAAGACGGAGACGATCT...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | ATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGGGAGACTGGCAAAGGTaGGTCATCCGGCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRNNSCTRFLSHEPNVSKGDWQR*VIRREE Trigger: CTCTTCCCGCCGGATGACTCACCTTTGCCAGTCTCC...CTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
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| CDS-3UTR TCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGAGACCAGCTGCTACATaGTTCAATTTGGGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVRPAAT*FNLGST Trigger: TGTTGATCCCAAATTGAATCATGTAGCAGCTGGTCT...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCCCTCGAGCGAGATCTTaGTCTCGAATGTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSPRARS*SRMSSL Trigger: AAGAGAAGACATTCGAGATCAAGATCTCGCTCGAGG...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACATCTCCTTGGGGATGGTaGGCGAGACAGCTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTSPWGW*ARQLSF Trigger: AAAAGAAAGCTGTCTCGCTCACCATCCCCAAGGAGA...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAATCTCCTTGGGGATGGTaGGCGAGACAGCTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKSPWGW*ARQLSF Trigger: AAAAGAAAGCTGTCTCGCTCACCATCCCCAAGGAGA...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATCCCGAGTCACCTGTTTaGCGTCTTTGTCACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHPESPV*RLCHSQ Trigger: CTGAGAGTGACAAAGACGTCAAACAGGTGACTCGGG...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | TCAAACTCTAGAAATATTCTAAGTGAACGCACTGAGGATCATAGACAGAGACAACGCTCGGAGACACGTTaGTCACCTGGATCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSRNILSERTEDHRQRQRSETR*SPGSPR Trigger: CCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCG...TTGTCTCTGTCTATGATCCTCAGTGCGTTCACTTAGAATATTTCTAGAGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAATTCTACTCCTGGATTTaGAGTGTGACCGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKFYSWI*SVTASL Trigger: CAAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAA...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAATCTCCTTCTACTCCTaGATTTGGAGTGTGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTISFYS*IWSVTA Trigger: GGCGGTCACACTCCAAATCCAGGAGTAGAAGGAGAT...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCTCCGTCTTGGACTTTTaGATCTCCTTCTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSSVLDF*ISFYSW Trigger: CCAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGA...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACTCCGTCTTGGACTTTTaGATCTCCTTCTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNSVLDF*ISFYSW Trigger: CCAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGA...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACATCTGCAGCAAGGGACTaGGAGTTCAAGTTTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTSAARD*EFKFVP Trigger: AGGAACAAACTTGAACTCTCAGTCCCTTGCTGCAGA...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR TCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAATGTCTTCTTCGTGGTaGTCATCCCCGTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTMSSSW*SSPFTL Trigger: CAAAGTGAACGGGGATGATCACCACGAAGAAGACAT...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGTCTTCTCTCTCTGCTTaGACTCCGAGAGCGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAHEGQFKMHHHFLFNSESSLSA*TPRASG Trigger: GCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGA...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGCCTTCTCCTTGTCTTTaGTCCTCTTCTTTTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRQRQSMPAGDACSCSSVPSPCL*SSSFYL Trigger: CAAGTAAAAAGAAGAGGAGCAAAGACAAGGAGAAGG...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACTGTTTTAGGGGACACTaGTTCTGTTGGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNCFRGH*FCWSLL Trigger: GAGAAGAGACCAACAGAAGCAGTGTCCCCTAAAACA...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR GCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCCTAGAATCACAAACGTaGAAACTGCTTGCACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSLESQT*KLLALR Trigger: TCGGAGTGCAAGCAGTTTGCACGTTTGTGATTCTAG...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069025.14 |
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| CDS-3UTR CCA 90 bp | AGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATTTTTGTCTCTGGCTTTaGATGTGCTCCTTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCMQLFICVKAAVAQLLDFCLWL*MCSLTF Trigger: GAAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAA...ATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCTTTTGTCTCTGGCTTTaGATGTGCTCCTTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSFCLWL*MCSLTF Trigger: GAAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAA...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTGTGCTCCTTCACTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHEPNVSKHSRFSRGVLLHFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGTGAAG...GAGCACACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147304.3 |
||
| CDS-3UTR TCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCAGACCAGCTGCTACATaGTTCAATTTGGGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSRPAAT*FNLGST Trigger: TGTTGATCCCAAATTGAATCATGTAGCAGCTGGTCT...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR GCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAATGTTTTAGGGGACACTaGTTCTGTTGGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKCFRGH*FCWSLL Trigger: GAGAAGAGACCAACAGAAGCAGTGTCCCCTAAAACA...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACAAGATCGTCTCCGTCTTaGACTTTTGGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTRSSPS*TFGSPS Trigger: AGAAGGAGATCCAAAAGTCCAAGACGGAGACGATCT...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAAAGATCGTCTCCGTCTTaGACTTTTGGATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKRSSPS*TFGSPS Trigger: AGAAGGAGATCCAAAAGTCCAAGACGGAGACGATCT...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACATTTTGTCTCTGGCTTTaGATGTGCTCCTTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTFCLWL*MCSLTF Trigger: GAAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAA...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAAAGACCAGCTGCTACATaGTTCAATTTGGGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKRPAAT*FNLGST Trigger: TGTTGATCCCAAATTGAATCATGTAGCAGCTGGTCT...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | TATAGCTTTTGCTATAAAGCACTAGAGGTCACAATCAGGTGTTCTGAAGCCATTTCTCCTTGGGGATGGTaGGCGAGACAGCTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSFCYKALEVTIRCSEAISPWGW*ARQLSF Trigger: AAAAGAAAGCTGTCTCGCTCACCATCCCCAAGGAGA...AATGGCTTCAGAACACCTGATTGTGACCTCTAGTGCTTTATAGCAAAAGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATTGTTTTAGGGGACACTaGTTCTGTTGGTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHCFRGH*FCWSLL Trigger: GAGAAGAGACCAACAGAAGCAGTGTCCCCTAAAACA...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCAACTCCTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSNSFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGGAGTT...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACGCACTCTCTTCATaGCTTCCTCTATTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTHALSS*LPLFLY Trigger: GTAAAGAAATAGAGGAAGCCATGAAGAGAGTGCGTG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACATTCTTCCTTCTTGTCTaGCTCAATAGCGGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTFFLLV*LNSGRN Trigger: ATTTCTGCCGCTATTGAGCCAGACAAGAAGGAAGAA...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | TATAGCTTTTGCTATAAAGCACTAGAGGTCACAATCAGGTGTTCTGAAGCCATTATCTCCTTCTACTCCTaGATTTGGAGTGTGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSFCYKALEVTIRCSEAIISFYS*IWSVTA Trigger: GGCGGTCACACTCCAAATCCAGGAGTAGAAGGAGAT...AATGGCTTCAGAACACCTGATTGTGACCTCTAGTGCTTTATAGCAAAAGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGCCTCGAGCGAGATCTTaGTCTCGAATGTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAHEGQFKMHHHFLFNSEPRARS*SRMSSL Trigger: AAGAGAAGACATTCGAGATCAAGATCTCGCTCGAGG...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACCTTCTCCTTGTCTTTaGTCCTCTTCTTTTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTPSPCL*SSSFYL Trigger: CAAGTAAAAAGAAGAGGAGCAAAGACAAGGAGAAGG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGACGACTCGTGTCGGCTaGTTCACTTCAGCATATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRNNSCTRFLSHEPNVSKTTRVG*FTSAYG Trigger: ACCATATGCTGAAGTGAAGCAGCCGACACGAGTCGT...CTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147304.3 |
||
| CDS-3UTR CCA 90 bp | AACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSCTRFLSHEPNVSKHSRAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...CCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS-3UTR CCA 90 bp | GTAACCATGGCAATGCTGGTCACCCGGGTACCACTTTATAGCTTTTGCTATAAAAACTCCTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTMAMLVTRVPLYSFCYKNSFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGGAGTT...TTTATAGCAAAAGCTATAAAGTGGTACCCGGGTGACCAGCATTGCCATGGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCDQRHAILERQISVISVHSESV*LCCSFL Trigger: CAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTG...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACTTCTTTTTACTTGTTaGTCGTTCCCTTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTLLFTC*SFPFIS Trigger: AGAGATGAAAGGGAACGATCAACAAGTAAAAAGAAG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCTAGAAATATTCTAAGTGAACGCACTGAGGATCATAGACAGAGACAAATGTCTTCTTCGTGGTaGTCATCCCCGTTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNSRNILSERTEDHRQRQMSSSW*SSPFTL Trigger: CAAAGTGAACGGGGATGATCACCACGAAGAAGACAT...TTGTCTCTGTCTATGATCCTCAGTGCGTTCACTTAGAATATTTCTAGAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCTAGAAATATTCTAAGTGAACGCACTGAGGATCATAGACAGAGACAATCCGTCTTGGACTTTTaGATCTCCTTCTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSRNILSERTEDHRQRQSVLDF*ISFYSW Trigger: CCAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGA...TTGTCTCTGTCTATGATCCTCAGTGCGTTCACTTAGAATATTTCTAGAGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGTCAAAAGCTGTTTTATaGACAACGACTCGTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRNNSCTRFLSHEPNVSKSKAVL*TTTRVG Trigger: GCCGACACGAGTCGTTGTTCATAAAACAGCTTTTGA...CTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147304.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTTAGTCTCATCAGGAATAACTCAATATGTACAGGGCACTTAAGAGAAACTGCTGAGTCTGGATCATaGAACTTAACAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIRNNSICTGHLRETAESGS*NLTKQT Trigger: TGTCTGCTTTGTTAAGTTCCATGATCCAGACTCAGC...AGTTTCTCTTAAGTGCCCTGTACATATTGAGTTATTCCTGATGAGACTAAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140491.8 |
||
| CDS-3UTR CCA 90 bp | TATAGCTTTTGCTATAAAGCACTAGAGGTCACAATCAGGTGTTCTGAAGCCATTCACGCACTCTCTTCATaGCTTCCTCTATTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YSFCYKALEVTIRCSEAIHALSS*LPLFLY Trigger: GTAAAGAAATAGAGGAAGCCATGAAGAGAGTGCGTG...AATGGCTTCAGAACACCTGATTGTGACCTCTAGTGCTTTATAGCAAAAGCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCTAGAAATATTCTAAGTGAACGCACTGAGGATCATAGACAGAGACAATTCTTCCTTCTTGTCTaGCTCAATAGCGGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNSRNILSERTEDHRQRQFFLLV*LNSGRN Trigger: ATTTCTGCCGCTATTGAGCCAGACAAGAAGGAAGAA...TTGTCTCTGTCTATGATCCTCAGTGCGTTCACTTAGAATATTTCTAGAGTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGCACGCACTCTCTTCATaGCTTCCTCTATTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KCDQRHAILERQISVISVHALSS*LPLFLY Trigger: GTAAAGAAATAGAGGAAGCCATGAAGAGAGTGCGTG...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| CDS-3UTR CCA 90 bp | AGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAAGAACTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNNSCTRFLSHEPNVSKHKNFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGTTCTT...GTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTTAGTCTCATCAGGAATAACTCAATATGTACAGGGCACTTAAGAGAAACTAAGAACTTCAGCATATaGTACGACTATCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLIRNNSICTGHLRETKNFSI*YDYQSS Trigger: AGAGCTTTGATAGTCGTACCATATGCTGAAGTTCTT...AGTTTCTCTTAAGTGCCCTGTACATATTGAGTTATTCCTGATGAGACTAAGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140491.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGCCTTCTCCTTGTCTTTaGTCCTCTTCTTTTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCDQRHAILERQISVISVPSPCL*SSSFYL Trigger: CAAGTAAAAAGAAGAGGAGCAAAGACAAGGAGAAGG...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
||
| CDS-3UTR TCA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGCTTCTTTTTACTTGTTaGTCGTTCCCTTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCDQRHAILERQISVISVLLFTC*SFPFIS Trigger: AGAGATGAAAGGGAACGATCAACAAGTAAAAAGAAG...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
||
| 3UTR CAA 72 bp | GGTATAGGTGAGATCATATTTATTCCTAAGACACTGTaGGATGAACTTAGTTCTGTACTAAAACACAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GIGEIIFIPKTL*DELSSVLKHRL Trigger: TAACCTGTGTTTTAGTACAGAACTAAGTTCATCCAACAGTGTCTTAGGAATAAATATGATCTCACCTATACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
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| CDS CCA 90 bp | CGCCGCCTGGCCCGCCACTGGGGCCTGGGCCCGGGCCTGGCGCGCTaGGGACCACTGCCGTGCTGCTCATGGCGCGGGCTGCCTCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLARHWGLGPGLAR*GPLPCCSWRGLPPE Trigger: TTCGGGAGGCAGCCCGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGGCCAGGCGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
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| CDS CCA 90 bp | CGTTGGTCACCTGGATCACCTCGGTGCCGCCGCCTGGCCCGCCACTaGGGCCTGGGCCCGGGCCTGGCGCGCTGGGGACCACTGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RWSPGSPRCRRLARH*GLGPGLARWGPLPC Trigger: GCACGGCAGTGGTCCCCAGCGCGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGGCCAGGCGGCGGCACCGAGGTGATCCAGGTGACCAACG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000126716.9 ENSMUST00000137444.8 |
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| CDS CCA 90 bp | GCTCGGAGACACGTTGGTCACCTGGATCACCTCGGTGCCGCCGCCTaGCCCGCCACTGGGGCCTGGGCCCGGGCCTGGCGCGCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRHVGHLDHLGAAA*PATGAWARAWRAGD Trigger: GTCCCCAGCGCGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGGCCAGGCGGCGGCACCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000126716.9 ENSMUST00000137444.8 |
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| CDS GCA 90 bp | CTGAGCTGGCGCTCGGAGACACGTTGGTCACCTGGATCACCTCGGTaGCGCCGCCTGGCCCGCCACTGGGGCCTGGGCCCGGGCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSWRSETRWSPGSPR*RRLARHWGLGPGLA Trigger: CGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGGCCAGGCGGCGGCACCGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGCCAGCTCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000126716.9 ENSMUST00000137444.8 |
||
| CDS GCA 90 bp | CCCGCCACTGGGGCCTGGGCCCGGGCCTGGCGCGCTGGGGACCACTaGCGTGCTGCTCATGGCGCGGGCTGCCTCCCGAAAGAAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PATGAWARAWRAGDH*RAAHGAGCLPKEVS Trigger: AGAAACTTCTTTCGGGAGGCAGCCCGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
||
| CDS CCA 90 bp | ATCGTCTCCGTCTTGGACTTTTGGATCTCCTTCTACTCCTGGATTTaGAGTGTGACCGCCTCCTTGACCGGCTTCGTGACCGCCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSVLDFWISFYSWI*SVTASLTGFVTACV Trigger: GACACAGGCGGTCACGAAGCCGGTCAAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGAGACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000198705.5 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGGCGCTCGGAGACACGTaGGTCACCTGGATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HRQRQSMPAGDACSCSSVALGDT*VTWITS Trigger: CGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGC...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGCGCAGCTCGTCGATCTaGCCCAGGAAGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRQRQSMPAGDACSCSSVRSSSI*PRKPKS Trigger: GCTCTTCGGCTTCCTGGGCAAGATCGACGAGCTGCG...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS GCA 90 bp | GGATCTTGTACCACTCCTACTTCGCCGTCGTCTTCTCTCTCTGCTTaGACTCCGAGAGCGTCTGGCTGTGCTGTAGCTTTTTGGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSCTTPTSPSSSLSA*TPRASGCAVAFWWS Trigger: ACTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGACGGCGAAGTAGGAGTGGTACAAGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATCGCGCTCGGAGACACGTaGGTCACCTGGATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DACSCSSVLKQQLHSCLIALGDT*VTWITS Trigger: CGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGC...GATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTCGCAGCTCGTCGATCTaGCCCAGGAAGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHACWRCMQLFICVKAAVRSSSI*PRKPKS Trigger: GCTCTTCGGCTTCCTGGGCAAGATCGACGAGCTGCG...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACGCGCTCGGAGACACGTaGGTCACCTGGATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNALGDT*VTWITS Trigger: CGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGC...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTTTTATGAACAACGACTCGTGTCGGCTGCTTCAAATATGTACAGGGCAGCGCTCGGAGACACGTaGGTCACCTGGATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KLFYEQRLVSAASNMYRAALGDT*VTWITS Trigger: CGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGC...TGCCCTGTACATATTTGAAGCAGCCGACACGAGTCGTTGTTCATAAAACAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126716.9 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACGCAGCTCGTCGATCTaGCCCAGGAAGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTRSSSI*PRKPKS Trigger: GCTCTTCGGCTTCCTGGGCAAGATCGACGAGCTGCG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCCGCAGCTCGTCGATCTaGCCCAGGAAGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCTRFLSHEPNVSKHSRFRSSSI*PRKPKS Trigger: GCTCTTCGGCTTCCTGGGCAAGATCGACGAGCTGCG...GAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS CCA 90 bp | TACTTCGCCGTCGTCTTCTCTCTCTGCTTGCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTGGTGGAGTTTTGGAACGTTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YFAVVFSLCLHSESV*LCCSFLVEFWNVSF Trigger: AAAAGAAACGTTCCAAAACTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGACGGCGAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGTTTTTGTCTCTGGCTTaGGATGTGCTCCTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSCLITQMDVTMAMLVTRFLSLA*DVLLDL Trigger: AAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAAA...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACGCGCTCGGAGACACGTaGGTCACCTGGATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RNNSCTRFLSHEPNVSKHALGDT*VTWITS Trigger: CGAGGTGATCCAGGTGACCAACGTGTCTCCGAGCGC...GTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS-3UTR CAA 90 bp | CATAGACAGAGACAATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGCAACGAACACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HRQRQSMPAGDACSCSSVQRTQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTGTTCGTTG...CACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGATTGTCTCTGTCTATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACCTTCTACTCCTGGATTaGGAGTGTGACCGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNLLLLD*ECDRLL Trigger: AAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAAG...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTGCACAGCTGCTTGATCCTCCGTCTTGGACTTTaGGATCTCCTTCTACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DACSCSSVLKQQLHSCLILRLGL*DLLLLL Trigger: CAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGAG...GATCAAGCAGCTGTGCAACTGCTGCTTTAACACAGATGAACAGCTGCATGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTCATCAGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTACGCAGCTCGTCGATCTaGCCCAGGAAGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLIRNNSCTRFLSHEPNVRSSSI*PRKPKS Trigger: GCTCTTCGGCTTCCTGGGCAAGATCGACGAGCTGCG...TACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCTGATGAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS-3UTR CAA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTTGTCTGACTTCAGACTaGGTGAAACAAGACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHACWRCMQLFICVKAAVCLTSD*VKQDQL Trigger: CAGCTGGTCTTGTTTCACCAAGTCTGAAGTCAGACA...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | ATCCATGCCTGCTGGAGATGCATGCAGCTGTTCATCTGTGTTAAAGCAGCAGTTCTCTTTTCTTCCTTCTaGTCTGGCTCAATAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHACWRCMQLFICVKAAVLFSSF*SGSIAA Trigger: TGCCGCTATTGAGCCAGACAAGAAGGAAGAAAAGAG...AACTGCTGCTTTAACACAGATGAACAGCTGCATGCATCTCCAGCAGGCATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACTTCTACTCCTGGATTaGGAGTGTGACCGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTLLLLD*ECDRLL Trigger: AAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAAG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCCTCCGTCTTGGACTTTaGGATCTCCTTCTACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSLRLGL*DLLLLL Trigger: CAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGAG...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTGACCAACGACATGCGATTTTAGAAAGGCAAATTTCTGTAATTTCAGTGCTCCTGAGGGCGAGGTaGGTGAGGGCAACGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KCDQRHAILERQISVISVLLRAR*VRATEG Trigger: CCCTTCCGTTGCCCTCACCAACCTCGCCCTCAGGAG...CACTGAAATTACAGAAATTTGCCTTTCTAAAATCGCATGTCGTTGGTCACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | CGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACAGTCGGTTCTCCAGGGGTCAACGAACACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RFLSHEPNVSKHSRFSRGQRTQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTGTTCGTTG...ACCCCTGGAGAACCGACTGTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACTGTCTGACTTCAGACTaGGTGAAACAAGACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNCLTSD*VKQDQL Trigger: CAGCTGGTCTTGTTTCACCAAGTCTGAAGTCAGACA...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACACAGCCTCTTTTCTTCCTTCTaGTCTGGCTCAATAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPLVMCSCIHLGEMNTHSLFSSF*SGSIAA Trigger: TGCCGCTATTGAGCCAGACAAGAAGGAAGAAAAGAG...GCTGTGTGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACTCCGTCTTGGACTTTaGGATCTCCTTCTACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTLRLGL*DLLLLL Trigger: CAGGAGTAGAAGGAGATCCAAAAGTCCAAGACGGAG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | CACAGCTGCTTGATCACGCAAATGGATGTAACCATGGCAATGCTGGTCACCCGGTCCTCTTCTTTTTACTaGTTGATCGTTCCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSCLITQMDVTMAMLVTRSSSFY*LIVPFH Trigger: ATGAAAGGGAACGATCAACAAGTAAAAAGAAGAGGA...CCGGGTGACCAGCATTGCCATGGTTACATCCATTTGCGTGATCAAGCAGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS CCA 90 bp | TTTTCTTCCTTCTTGTCTGGCTCAATAGCGGCAGAAATCAGGGACTaGGCTTCACGCACTCTCTTCATGGCTTCCTCTATTTCTTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: FSSFLSGSIAAEIRD*ASRTLFMASSISLL Trigger: TAGTAAAGAAATAGAGGAAGCCATGAAGAGAGTGCGTGAAGCCCAGTCCCTGATTTCTGCCGCTATTGAGCCAGACAAGAAGGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000198705.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACAACGAACACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTQRTQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTGTTCGTTG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACTTTTTGTCTCTGGCTTaGGATGTGCTCCTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNFLSLA*DVLLDL Trigger: AAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAAA...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACCTGTGCTGTAGCTTTTaGGTGGAGTTTTGGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVLKPLVMCSCIHLGEMNLCCSF*VEFWNV Trigger: AACGTTCCAAAACTCCACCAAAAAGCTACAGCACAG...GTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATTGTCTGACTTCAGACTaGGTGAAACAAGACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHCLTSD*VKQDQL Trigger: CAGCTGGTCTTGTTTCACCAAGTCTGAAGTCAGACA...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATCTCTTTTCTTCCTTCTaGTCTGGCTCAATAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHLFSSF*SGSIAA Trigger: TGCCGCTATTGAGCCAGACAAGAAGGAAGAAAAGAG...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACACTGTGCTGTAGCTTTTaGGTGGAGTTTTGGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTLCCSF*VEFWNV Trigger: AACGTTCCAAAACTCCACCAAAAAGCTACAGCACAG...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAAGTTTCATGACGTTTGGGGTAACATGCAATCAGTGCATTCCCTACATCTGTGCTGTAGCTTTTaGGTGGAGTTTTGGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRKFHDVWGNMQSVHSLHLCCSF*VEFWNV Trigger: AACGTTCCAAAACTCCACCAAAAAGCTACAGCACAG...ATGTAGGGAATGCACTGATTGCATGTTACCCCAAACGTCATGAAACTTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | AGGAATAACTCCTGTACTCGATTTTTAAGTCATGAACCAAACGTAAGCAAGCACCAACGAACACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RNNSCTRFLSHEPNVSKHQRTQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTGTTCGTTG...GTGCTTGCTTACGTTTGGTTCATGACTTAAAAATCGAGTACAGGAGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126716.9 ENSMUST00000147304.3 |
||
| CDS-3UTR CAA 90 bp | AGCCTTAGTCTCATCAGGAATAACTCAATATGTACAGGGCACTTAAGAGAAACTCAACGAACACAGTGTTaGTCAGATGCTGTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLIRNNSICTGHLRETQRTQC*SDAVPQ Trigger: TTGTGGCACAGCATCTGACAAACACTGTGTTCGTTG...AGTTTCTCTTAAGTGCCCTGTACATATTGAGTTATTCCTGATGAGACTAAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140491.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACATGAAGGTCAATTTAAAATGCACCACCACTTCTTGTTCAACAGTGAGTTTTTGTCTCTGGCTTaGGATGTGCTCCTTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: KAHEGQFKMHHHFLFNSEFLSLA*DVLLDL Trigger: AAGGTCAAGGAGCACATCCAAAGCCAGAGACAAAAA...CTCACTGTTGAACAAGAAGTGGTGGTGCATTTTAAATTGACCTTCATGTGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAGCCATTGGTAATGTGCAGCTGTATACACCTAGGTGAGATGAACACATCCTCTTCTTTTTACTaGTTGATCGTTCCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLKPLVMCSCIHLGEMNTSSSFY*LIVPFH Trigger: ATGAAAGGGAACGATCAACAAGTAAAAAGAAGAGGA...TGTGTTCATCTCACCTAGGTGTATACAGCTGCACATTACCAATGGCTTCAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS GCA 72 bp | GGGGCCTGGGCCCGGGCCTGGCGCGCTGGGGACCACTaGCGTGCTGCTCATGGCGCGGGCTGCCTCCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GAWARAWRAGDH*RAAHGAGCLPK Trigger: TTTCGGGAGGCAGCCCGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCGCCAGGCCCGGGCCCAGGCCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
||
| CDS CCA 72 bp | CACGTTGGTCACCTGGATCACCTCGGTGCCGCCGCCTaGCCCGCCACTGGGGCCTGGGCCCGGGCCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HVGHLDHLGAAA*PATGAWARAWR Trigger: GCGCCAGGCCCGGGCCCAGGCCCCAGTGGCGGGCCAGGCGGCGGCACCGAGGTGATCCAGGTGACCAACGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000126716.9 ENSMUST00000137444.8 |
||
| CDS GCA 72 bp | GGCCCGGGCCTGGCGCGCTGGGGACCACTGCCGTGCTaGTCATGGCGCGGGCTGCCTCCCGAAAGAAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGLARWGPLPC*SWRGLPPERSF Trigger: GAAACTTCTTTCGGGAGGCAGCCCGCGCCATGAGCAGCACGGCAGTGGTCCCCAGCGCGCCAGGCCCGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
||
| CDS GCA 72 bp | GCTGGGGACCACTGCCGTGCTGCTCATGGCGCGGGCTaGCTCCCGAAAGAAGTTTCTCCTGAGGGCGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGDHCRAAHGAG*LPKEVSPEGEV Trigger: AACCTCGCCCTCAGGAGAAACTTCTTTCGGGAGGCAGCCCGCGCCATGAGCAGCACGGCAGTGGTCCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069025.14 ENSMUST00000121326.8 |
||
| CDS CAA 72 bp | GCTGCCTCCCGAAAGAAGTTTCTCCTGAGGGCGAGGTaGGTGAGGGCAACGGAAGGGCTCGTCGGTCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AASRKKFLLRAR*VRATEGLVGPA Trigger: CGCAGGACCGACGAGCCCTTCCGTTGCCCTCACCAACCTCGCCCTCAGGAGAAACTTCTTTCGGGAGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121326.8 |
||
| CDS CAA 72 bp | TCCTTCTACTCCTGGATTTGGAGTGTGACCGCCTCCTaGACCGGCTTCGTGACCGCCTGTGTCTGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SFYSWIWSVTAS*TGFVTACVWRM Trigger: CATCCTCCAGACACAGGCGGTCACGAAGCCGGTCAAGGAGGCGGTCACACTCCAAATCCAGGAGTAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000198705.5 |
||
| CDS CAA 90 bp | GGGATCTTGTACCACTCCTACTTCGCCGTCGTCTTCTCTCTCTGCTaGCACTCCGAGAGCGTCTGGCTGTGCTGTAGCTTTTTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GILYHSYFAVVFSLC*HSESVWLCCSFLVE Trigger: CTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGACGGCGAAGTAGGAGTGGTACAAGATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS GCA 72 bp | ACCACTCCTACTTCGCCGTCGTCTTCTCTCTCTGCTTaGACTCCGAGAGCGTCTGGCTGTGCTGTAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TTPTSPSSSLSA*TPRASGCAVAF Trigger: AAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGACGGCGAAGTAGGAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS CAA 72 bp | TACCACTCCTACTTCGCCGTCGTCTTCTCTCTCTGCTaGCACTCCGAGAGCGTCTGGCTGTGCTGTAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YHSYFAVVFSLC*HSESVWLCCSF Trigger: AAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGACGGCGAAGTAGGAGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS CCA 72 bp | GTCGTCTTCTCTCTCTGCTTGCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTGGTGGAGTTTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VVFSLCLHSESV*LCCSFLVEFWN Trigger: GTTCCAAAACTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGAGAGAGAAGACGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072875.15 ENSMUST00000121326.8 |
||
| CDS CCA 72 bp | CACAAACGTGCAAACTGCTTGCACTCCGAGAGCGTCTaGCTGTGCTGTAGCTTTTTGGTGGAGTTTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HKRANCLHSESV*LCCSFLVEFWN Trigger: GTTCCAAAACTCCACCAAAAAGCTACAGCACAGCCAGACGCTCTCGGAGTGCAAGCAGTTTGCACGTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069025.14 |
||
| CDS CCA 72 bp | TTCTTGTCTGGCTCAATAGCGGCAGAAATCAGGGACTaGGCTTCACGCACTCTCTTCATGGCTTCCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: FLSGSIAAEIRD*ASRTLFMASSI Trigger: AATAGAGGAAGCCATGAAGAGAGTGCGTGAAGCCCAGTCCCTGATTTCTGCCGCTATTGAGCCAGACAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 ENSMUST00000198705.5 |
||
| CDS GCA 72 bp | TCTTCTTTTTACTTGTTGATCGTTCCCTTTCATCTCTaGTTCTTTCTTTGTCCTTATCTTTCTTCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSFYLLIVPFHL*FFLCPYLSSSL Trigger: AAGAGAAGAAGAAAGATAAGGACAAAGAAAGAAGCAGAGATGAAAGGGAACGATCAACAAGTAAAAAGAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069025.14 ENSMUST00000072875.15 ENSMUST00000121326.8 |
||