Pregenerated sensors for SRRT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037364Ensembl transcript IDs: ENSMUST00000040873.12, ENSMUST00000196109.5, ENSMUST00000197466.5, ENSMUST00000197484.2, ENSMUST00000198526.5, ENSMUST00000199243.5, ENSMUST00000199365.5, ENSMUST00000199605.2, ENSMUST00000199756.3, ENSMUST00000223263.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCAGGGCCCATGCTGGCTGGCGGGCTGCCCGCTGGCTCCTGGCTaGGGTGACCGGCCTAGATGCCCCGCCCCCGCGGGCCTCCGCGGT | + |
|
Preference number: 1 (lower is better) Translates to: AQGPCWLAGCPLAPG*GDRPRCPAPAGLRG Trigger: ACCGCGGAGGCCCGCGGGGGCGGGGCATCTAGGCCGGTCACCCCAGCCAGGAGCCAGCGGGCAGCCCGCCAGCCAGCATGGGCCCTGGGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR GCA 90 bp | ATTCAGCTAGACCACTGCATTGTGCACAGCGGTGCCCTGCCTGTCTaGCTGGCCGGCCCCGCCGCTCAGCCCGGGGGCTCATGTATGGGC | + |
|
Preference number: 1 (lower is better) Translates to: IQLDHCIVHSGALPV*LAGPAAQPGGSCMG Trigger: GCCCATACATGAGCCCCCGGGCTGAGCGGCGGGGCCGGCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATGCAGTGGTCTAGCTGAAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR CCA 90 bp | TCAAACAGAGCTCAAGATTTAACTAGTGGCGCCCAGGGCCCATGCTaGCTGGCGGGCTGCCCGCTGGCTCCTGGCTGGGGTGACCGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: SNRAQDLTSGAQGPC*LAGCPLAPGWGDRP Trigger: AGGCCGGTCACCCCAGCCAGGAGCCAGCGGGCAGCCCGCCAGCCAGCATGGGCCCTGGGCGCCACTAGTTAAATCTTGAGCTCTGTTTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR GCA 90 bp | GGCACCATATGGAGCATGGGGGTATGGAGGCCCTCCTGTTGGGACTaGAGGGCGGACAGCACCAGCTCCATAGCCCAAGATGGGAGGCCG | + |
|
Preference number: 1 (lower is better) Translates to: GTIWSMGVWRPSCWD*RADSTSSIAQDGRP Trigger: CGGCCTCCCATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | ACGGCCGGCACCATATGGAGCATGGGGGTATGGAGGCCCTCCTGTTaGGACTGCAGGGCGGACAGCACCAGCTCCATAGCCCAAGATGGG | + |
|
Preference number: 1 (lower is better) Translates to: TAGTIWSMGVWRPSC*DCRADSTSSIAQDG Trigger: CCCATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | AGCATCATAGTTCCCACGGCCGGCACCATATGGAGCATGGGGGTATaGAGGCCCTCCTGTTGGGACTGCAGGGCGGACAGCACCAGCTCC | + |
|
Preference number: 1 (lower is better) Translates to: SIIVPTAGTIWSMGV*RPSCWDCRADSTSS Trigger: GGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | GCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATaGAGCATGGGGGTATGGAGGCCCTCCTGTTGGGACTGCAGGGCG | + |
|
Preference number: 1 (lower is better) Translates to: ALASKSIIVPTAGTI*SMGVWRPSCWDCRA Trigger: CGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | AGGCTTGTGGGCACAGGAGGCGTCCCAGGCTCAGAGGCCCAGAGCTaGGTCCTGTCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTTG | + |
|
Preference number: 1 (lower is better) Translates to: RLVGTGGVPGSEAQS*VLSSSVWISLAANL Trigger: CAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTGGGCCTCTGAGCCTGGGACGCCTCCTGTGCCCACAAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | AGCACCAGCTCCATAGCCCAAGATGGGAGGCCGGGGCTGACCATATaGCATCAAGCCCTGTGGCGTCTGATGTGGGTAGGGAAGTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: STSSIAQDGRPGLTI*HQALWRLMWVGKSW Trigger: CCAGGACTTCCCTACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGAGCTGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 90 bp | AGAAGTCAACATCATCCGGGGCATCCAGGTCCCGATACTCCACTATaGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: RSQHHPGHPGPDTPL*PLGLLEPSCSEVSQ Trigger: CTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGGATGATGTTGACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 90 bp | GAGAGAGCAAGTCTTATGCAAGGGCCGGGGCTTACACTCCAACCCTaGAGCATCCTTAGGCTTCTCCTTCTCCTCCTCTTTGGGCTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ERASLMQGPGLTLQP*SILRLLLLLLFGLL Trigger: GAGAAGCCCAAAGAGGAGGAGAAGGAGAAGCCTAAGGATGCTGCAGGGTTGGAGTGTAAGCCCCGGCCCTTGCATAAGACTTGCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR GCA 90 bp | GAAATGTTGGGTGCGATGTTGCGCATGAAGAGAGAGCAAGTCTTATaGAAGGGCCGGGGCTTACACTCCAACCCTGCAGCATCCTTAGGC | + |
|
Preference number: 1 (lower is better) Translates to: EMLGAMLRMKREQVL*KGRGLHSNPAASLG Trigger: GCCTAAGGATGCTGCAGGGTTGGAGTGTAAGCCCCGGCCCTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR CCA 90 bp | CAGTTCCTGCGTGTTGGAGGTGACAAACTTCTCCACTTCCTGCTCTaGGTCTTTTCGACCCATCTTCTGGGCCTCTTCCTCAGAAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: QFLRVGGDKLLHFLL*VFSTHLLGLFLRKG Trigger: TCCCTTTCTGAGGAAGAGGCCCAGAAGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR TCA 90 bp | GAGGACATAGCCACTTATCCTTGCCCAGTTCCTGCGTGTTGGAGGTaGCAAACTTCTCCACTTCCTGCTCTGGGTCTTTTCGACCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: EDIATYPCPVPACWR*QTSPLPALGLFDPS Trigger: AGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 90 bp | TTCTTGCCACTGAGAGGACATAGCCACTTATCCTTGCCCAGTTCCTaGGTGTTGGAGGTGACAAACTTCTCCACTTCCTGCTCTGGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: FLPLRGHSHLSLPSS*VLEVTNFSTSCSGS Trigger: AGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTCTCAGTGGCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 90 bp | ATTAGCTTGGCTGCCAACTTGATGTCATTGCGCACTATCTGCTTGTaGTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: ISLAANLMSLRTICL*CVMPFMLRTRRVRS Trigger: AGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR GCA 90 bp | TCCTTCTTCACCTCCTCGATCTTCTCGGCATGCTTATTGAAGATATaGTTGCGCACAAACTCCGGGCCCTTGAATTTCTTGCCACTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: SFFTSSIFSACLLKI*LRTNSGPLNFLPLR Trigger: TCTCAGTGGCAAGAAATTCAAGGGCCCGGAGTTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGAGGTGAAGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | CACGGCCGGCACCATATGGAGCATGGGGGTATGGAGGCCCTCCTGTaGGGACTGCAGGGCGGACAGCACCAGCTCCATAGCCCAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: HGRHHMEHGGMEALL*GLQGGQHQLHSPRW Trigger: CCATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAGACCACTGCATTGTGCACAGCGGTGCCCTGCCTGTCTGCCTGGCCGGCTGGGTATGGTGGGGGTaGAGGTGGGTTTGCTCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: QLDHCIVHSGALPVCLAGWVWWG*RWVCSE Trigger: CTCGGAGCAAACCCACCTCCACCCCCACCATACCCA...GCCGGCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATGCAGTGGTCTAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGCTTTCCCACCTCATCAGGGTGGTACTTAGATCGGAACCTTGGCTGCTTGGTTGGCGGGCTGCCCGCTaGCTCCTGGCTGGGGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: TLSHLIRVVLRSEPWLLGWRAAR*LLAGVT Trigger: GGTCACCCCAGCCAGGAGCCAGCGGGCAGCCCGCCA...ACCAAGCAGCCAAGGTTCCGATCTAAGTACCACCCTGATGAGGTGGGAAAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTATGGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATAGCAGGGCCAGGTGGCTaGGCTGGCTTGATCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HYGPWVSSNHPVPRFPRIAGPGG*AGLISG Trigger: GCCTGAGATCAAGCCAGCTCAGCCACCTGGCCCTGC...TATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | GCATGGGCCCCCGAACGTGGATTATGCCACAGCGGTTGGGCATCTCGTCTTCATCACGTTGATCTCGGCTaGGTTGCCCTCCTTGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AWAPERGLCHSGWASRLHHVDLG*VALLGR Trigger: CCTCCCAAGGAGGGCAACCCAGCCGAGATCAACGTG...ATGAAGACGAGATGCCCAACCGCTGTGGCATAATCCACGTTCGGGGGCCCATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCTATGTCCAAGAGAAGGTTATCAAACCAGCCACTCTCCATGAGGGACAGGTGCTGGCTGGCGGGCTaGCCGCTGGCTCCTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSMSKRRLSNQPLSMRDRCWLAG*PLAPGW Trigger: CCAGCCAGGAGCCAGCGGGCAGCCCGCCAGCCAGCA...CCTGTCCCTCATGGAGAGTGGCTGGTTTGATAACCTTCTCTTGGACATAGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACTCCTGGGGTCAGGCCTaGGGGGAGTATCTGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SEVSQDNRLGLEKHHSSHSWGQA*GEYLGR Trigger: CCTGCCCAGATACTCCCCCCAGGCCTGACCCCAGGA...GTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR TCA 90 bp | TCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATGGAGCATGGGGGTATGGGTGGCTGAGCTGGCTTaGTCTCAGGCAAAGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SKSIIVPTAGTIWSMGVWVAELA*SQAKLG Trigger: GCCCAGCTTTGCCTGAGATCAAGCCAGCTCAGCCAC...CCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | CCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATCTGGGCAGGGCCAGGTaGCTGAGCTGGCTTGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: PSCSEVSQDNRLGLEKHHLGRAR*LSWLDL Trigger: GAGATCAAGCCAGCTCAGCCACCTGGCCCTGCCCAG...ATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | GTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTaGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATGG | + |
|
Preference number: 2 (lower is better) Translates to: VSSNHPVPRFPRITA*ASKSIIVPTAGTIW Trigger: CCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCATCAGGGTGGTACTTAGATCGGAACCTTGGCTGCTTGGTCAAACAGAGCATTGTGCACAGCGGTaGCCTGCCTGTCTGCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVVLRSEPWLLGQTEHCAQR*PACLPG Trigger: GCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATG...CTCTGTTTGACCAAGCAGCCAAGGTTCCGATCTAAGTACCACCCTGATGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTATGGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATATTCGGTTGGGAGGCATaGGCCCCCGAACGTGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: HYGPWVSSNHPVPRFPRIFGWEA*APERGL Trigger: TAATCCACGTTCGGGGGCCCATGCCTCCCAACCGAA...TATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | CACTATGGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATACTGTGGCGTCTGATGTaGGTAGGGAAGTCCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HYGPWVSSNHPVPRFPRILWRLM*VGKSWG Trigger: ACCCCAGGACTTCCCTACCCACATCAGACGCCACAG...TATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACCTCATCAGGGTGGTACTTAGATCGGAACCTTGGCTGCTTGGTCAAACAGGCTCATGTATGGGCTaGGTATGGTGGGGGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SHLIRVVLRSEPWLLGQTGSCMG*VWWGWR Trigger: CCTCCACCCCCACCATACCCAGCCCATACATGAGCC...TGTTTGACCAAGCAGCCAAGGTTCCGATCTAAGTACCACCCTGATGAGGTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGGCGAGGGGAGGCTTGTaGGCACAGGAGGCGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LMSLRTICLCCVMPFMLRARGGL*AQEASQ Trigger: CTGGGACGCCTCCTGTGCCCACAAGCCTCCCCTCGC...CCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | TCAGAGGCCCAGAGCTGGGTCCTGTCATCCAGTGTGTGGATTAGCTaGGCTGCCAACTTGATGTCATTGCGCACTATCTGCTTGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SEAQSWVLSSSVWIS*AANLMSLRTICLCC Trigger: ACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTGGGCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR GCA 90 bp | CCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATTCCTTGCCCAGTTCCTaGGTGTTGGAGGTGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSCSEVSQDNRLGLEKHHSLPSS*VLEVTN Trigger: GTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGA...ATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | CCACTGAGAGGACATAGCCACTTATCCTTGCCCAGTTCCTGCGTGTaGGAGGTGACAAACTTCTCCACTTCCTGCTCTGGGTCTTTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: PLRGHSHLSLPSSCV*EVTNFSTSCSGSFR Trigger: TCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTCTCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | GGGCCCTTGAATTTCTTGCCACTGAGAGGACATAGCCACTTATCCTaGCCCAGTTCCTGCGTGTTGGAGGTGACAAACTTCTCCACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GPLNFLPLRGHSHLS*PSSCVLEVTNFSTS Trigger: GGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTCTCAGTGGCAAGAAATTCAAGGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | TTGATCTCAGGCAAAGCTGGGCGCTTGGCGTCTGTGAGAAAGTTATaGAAGAACGCCACCTCCTTCTTCACCTCCTCGATCTTCTCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LISGKAGRLASVRKL*KNATSFFTSSIFSA Trigger: TGCCGAGAAGATCGAGGAGGTGAAGAAGGAGGTGGCGTTCTTCAATAACTTTCTCACAGACGCCAAGCGCCCAGCTTTGCCTGAGATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATACAATCAGGTAGTCAGTaGTGTTCTTCAGGATGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RITALASKSIIVPTAGTIQSGSQ*CSSGWG Trigger: ACCCCATCCTGAAGAACATCACTGACTACCTGATTG...TATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTCGGAGCCGAATGTTCTaGAGGTTCCAACAGATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLVLCNAIYVADTTGQVSRSRMF*RFQQIS Trigger: GGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCG...AGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCATCAGGGTGGTACTTAGATCGGAACCTTGGCTGCTTGGTCAAACAGAGATTCAGCTAGACCACTaGATTGTGCACAGCGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HLIRVVLRSEPWLLGQTEIQLDH*IVHSGA Trigger: GGCACCGCTGTGCACAATGCAGTGGTCTAGCTGAAT...CTCTGTTTGACCAAGCAGCCAAGGTTCCGATCTAAGTACCACCCTGATGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR CAA 90 bp | ATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTaGCGGACACGACGGGTCAGGTCTCTGTTCACACCGGGACTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: MSLRTICLCCVMPFM*RTRRVRSLFTPGLS Trigger: ACTGAGTCCCGGTGTGAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAGTGCGATGTTGCGCATaGAGAGAGAGCAAGTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LSSHSRSRMFCRFQQISLVRCCA*RESKSY Trigger: ATAAGACTTGCTCTCTCTTCATGCGCAACATCGCAC...TAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR CAA 90 bp | AGCTGGGTCCTGTCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTaGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: SWVLSSSVWISLAAN*MSLRTICLCCVMPF Trigger: AAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR CAA 90 bp | TTACAAAGAGAAATGATCTCTGCCCTTGAAATGTTGGGTGCGATGTaGCGCATGAAGAGAGAGCAAGTCTTATGCAAGGGCCGGGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LQREMISALEMLGAM*RMKREQVLCKGRGL Trigger: TAAGCCCCGGCCCTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTCTTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACCTCCTCGATCTTCTCGGCATGCTTATTGAAGATATGCTTGCGCACAAAGCTTGGCTGCCAACTTaGTGTCATTGCGCACTATCT | + |
|
Preference number: 2 (lower is better) Translates to: LHLLDLLGMLIEDMLAHKAWLPT*CHCALS Trigger: AGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGC...TTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGAGGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACCTCCTCGATCTTCTCGGCATGCTTATTGAAGATATGCTTGCGCACAAACTCCACTTCCTGCTCTaGGTCTTTTCGACCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHLLDLLGMLIEDMLAHKLHFLL*VFSTHL Trigger: AAGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAG...TTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGAGGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 90 bp | CCTGGGTATCGTTTACAAAGAGAAATGATCTCTGCCCTTGAAATGTaGGGTGCGATGTTGCGCATGAAGAGAGAGCAAGTCTTATGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PGYRLQREMISALEM*GAMLRMKREQVLCK Trigger: CTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTCTTTGTAAACGATACCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR-3UTR GCA 90 bp | CAACTTGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTCGGAGCCGAATGTTCTaGAGGTTCCAACAGATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QLDVIAHYLLVLCNAIYVRSRMF*RFQQIS Trigger: GGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCG...AACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCAACAGATCTCCTTAATGTTAACACTGCGGTCAAAAGTCACCCAGCCACGCACTCGCATAAAGCCTaGGTATCGTTTACAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VPTDLLNVNTAVKSHPATHSHKA*VSFTKR Trigger: TCTCTTTGTAAACGATACCCAGGCTTTATGCGAGTG...CGTGGCTGGGTGACTTTTGACCGCAGTGTTAACATTAAGGAGATCTGTTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR GCA 72 bp | GACCACTGCATTGTGCACAGCGGTGCCCTGCCTGTCTaGCTGGCCGGCCCCGCCGCTCAGCCCGGGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DHCIVHSGALPV*LAGPAAQPGGS Trigger: TGAGCCCCCGGGCTGAGCGGCGGGGCCGGCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATGCAGTGGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTCTGCCTGGCCGGCCCCGCCGCTCAGCCCGGGGGCTCATGTATGGGCTGGGGTGGAGGTGGGTTaGCTCCGAGCTCCGTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSAWPAPPLSPGAHVWAGVEVG*LRAPSM Trigger: CATCGACGGAGCTCGGAGCAAACCCACCTCCACCCC...AGCCCATACATGAGCCCCCGGGCTGAGCGGCGGGGCCGGCCAGGCAGACAGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR CCA 72 bp | GTTCCCACGGCCGGCACCATATGGAGCATGGGGGTATaGAGGCCCTCCTGTTGGGACTGCAGGGCGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VPTAGTIWSMGV*RPSCWDCRADS Trigger: GCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 72 bp | ATACATTCAGCTAGACCACTGCATTGTGCACAGCGGTaGCCTGCCTGTCTGCCTGGCCGGCCCCGCCGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IHSARPLHCAQR*PACLPGRPRRS Trigger: TGAGCGGCGGGGCCGGCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATGCAGTGGTCTAGCTGAATGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| 3UTR CCA 72 bp | GGGAGGCCGGGGCTGACCATATGGCATCAAGCCCTGTaGCGTCTGATGTGGGTAGGGAAGTCCTGGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRPGLTIWHQAL*RLMWVGKSWGQ Trigger: CTGACCCCAGGACTTCCCTACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | CTGCAGGGCGGACAGCACCAGCTCCATAGCCCAAGATaGGAGGCCGGGGCTGACCATATGGCATCAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQGGQHQLHSPR*EAGADHMASSP Trigger: AGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 72 bp | TGGAGCATGGGGGTATGGAGGCCCTCCTGTTGGGACTaGAGGGCGGACAGCACCAGCTCCATAGCCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WSMGVWRPSCWD*RADSTSSIAQD Trigger: ATCTTGGGCTATGGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | GGCACAGGAGGCGTCCCAGGCTCAGAGGCCCAGAGCTaGGTCCTGTCATCCAGTGTGTGGATTAGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTGGVPGSEAQS*VLSSSVWISLA Trigger: AGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTGGGCCTCTGAGCCTGGGACGCCTCCTGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | ACCATATGGAGCATGGGGGTATGGAGGCCCTCCTGTTaGGACTGCAGGGCGGACAGCACCAGCTCCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TIWSMGVWRPSC*DCRADSTSSIA Trigger: GGCTATGGAGCTGGTGCTGTCCGCCCTGCAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | GATCAGCTTCTCATCTCTCTCCACGTTGATCTCGGCTaGGTTGCCCTCCTTGGGAGGCTCCTCAGGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DQLLISLHVDLG*VALLGRLLRRG Trigger: CCCCCTCCTGAGGAGCCTCCCAAGGAGGGCAACCCAGCCGAGATCAACGTGGAGAGAGATGAGAAGCTGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | TCCATAGCCCAAGATGGGAGGCCGGGGCTGACCATATaGCATCAAGCCCTGTGGCGTCTGATGTGGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIAQDGRPGLTI*HQALWRLMWVG Trigger: CCCTACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | CGGGGCATCCAGGTCCCGATACTCCACTATGGCCCTTaGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RGIQVPILHYGP*VSSNHPVPRFP Trigger: GGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | CATCATCCGGGGCATCCAGGTCCCGATACTCCACTATaGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: HHPGHPGPDTPL*PLGLLEPSCSE Trigger: CTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGGATGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CAA 90 bp | TCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATGGAGCATGGGGGTATGGCTTCAGGATGGGGTTTaGCGAGGGGAGGCTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKSIIVPTAGTIWSMGVWLQDGV*RGEACG Trigger: CCCACAAGCCTCCCCTCGCAAAACCCCATCCTGAAG...CCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | TCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATaGAGCATGGGGGTATGGAGGCCCTCCTGTTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSIIVPTAGTI*SMGVWRPSCWD Trigger: GTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | GCTCATCCCCAAGGGATAAAAGGGACAAAGGAACGCTaGGTGTGTGGGATACTGAGGCAAGGAAGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHPQGIKGTKER*VCGILRQGSSQ Trigger: CTGGCTGCTTCCTTGCCTCAGTATCCCACACACCCAGCGTTCCTTTGTCCCTTTTATCCCTTGGGGATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197484.2 |
||
| 3UTR TCA 72 bp | TCTCTGCCCTTGAAATGTTGGGTGCGATGTTGCGCATaGAGAGAGAGCAAGTCTTATGCAAGGGCCGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLPLKCWVRCCA*RESKSYARAGA Trigger: AGCCCCGGCCCTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR CCA 72 bp | CGTGTTGGAGGTGACAAACTTCTCCACTTCCTGCTCTaGGTCTTTTCGACCCATCTTCTGGGCCTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVGGDKLLHFLL*VFSTHLLGLFL Trigger: GAGGAAGAGGCCCAGAAGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CCA 72 bp | GCCAGGTGGCTGAGCTGGCTTGATCTCAGGCAAAGCTaGGCGCTTGGCGTCTGTGAGAAAGTTATTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ARWLSWLDLRQS*ALGVCEKVIEE Trigger: TTCTTCAATAACTTTCTCACAGACGCCAAGCGCCCAGCTTTGCCTGAGATCAAGCCAGCTCAGCCACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR TCA 72 bp | GCCACTTATCCTTGCCCAGTTCCTGCGTGTTGGAGGTaGCAAACTTCTCCACTTCCTGCTCTGGGTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ATYPCPVPACWR*QTSPLPALGLF Trigger: GAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 72 bp | CTGAGAGGACATAGCCACTTATCCTTGCCCAGTTCCTaGGTGTTGGAGGTGACAAACTTCTCCACTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRGHSHLSLPSS*VLEVTNFSTSC Trigger: GCAGGAAGTGGAGAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 72 bp | CCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTaGAGGTTCCAACAGATCTCCTTAATGTTAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLSSHSRSRMF*RFQQISLMLTL Trigger: CAGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGTGGATTAGCTTGGCTGCCAACTTGATGTCATTGCGCACTATCTGCTTGGCCAACTTGATGTCATaGCGCACTATCTGCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SVWISLAANLMSLRTICLANLMS*RTICLC Trigger: GCACAAGCAGATAGTGCGCAATGACATCAAGTTGGC...CAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAAACTTCTCCACTTCCTGCTCTGGGTCTTTTCGACCCATCTTCTGGGCCTCAGTTTATCCAAGACCTaGATCAGCTTCTCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DKLLHFLLWVFSTHLLGLSLSKT*ISFSSL Trigger: GAGAGATGAGAAGCTGATCAAGGTCTTGGATAAACT...GAGGCCCAGAAGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR GCA 72 bp | ACCTCCTCGATCTTCTCGGCATGCTTATTGAAGATATaGTTGCGCACAAACTCCGGGCCCTTGAATTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TSSIFSACLLKI*LRTNSGPLNFL Trigger: CAAGAAATTCAAGGGCCCGGAGTTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCGTCTGTGAGAAAGTTATTGAAGAACGCCACCTCCTTCTTCACCTCCTCGATTTGCGCACTATCTGCTaGTGCTGTGTAATGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVCEKVIEERHLLLHLLDLRTIC*CCVMPF Trigger: AAATGGCATTACACAGCACAAGCAGATAGTGCGCAA...ATCGAGGAGGTGAAGAAGGAGGTGGCGTTCTTCAATAACTTTCTCACAGACGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGTTGCGCACTATCTGCTaGTGCTGTGTAATGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LRTICLCCVMPFMLRTRRLRTIC*CCVMPF Trigger: AAATGGCATTACACAGCACAAGCAGATAGTGCGCAA...CCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTGTCTGCCTGGCCGGCCCCGCCGCTCAGCCCGGGGGCTCATGTATGGGCTCACTCCTCGTCTTTGTaGGCCAGGAAAAAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSAWPAPPLSPGAHVWAHSSSL*ARKKSC Trigger: GCAGGACTTTTTCCTGGCTCACAAAGACGAGGAGTG...AGCCCATACATGAGCCCCCGGGCTGAGCGGCGGGGCCGGCCAGGCAGACAGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTGTCTGCCTGGCCGGCCCCGCCGCTCAGCCCGGGGGCTCATGTATGGGCTAAGTCCTGCATCTGCTaGCTTCGGAAGTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSAWPAPPLSPGAHVWAKSCIC*LRKSSL Trigger: CAAGCTGGACTTCCGAAGGCAGCAGATGCAGGACTT...AGCCCATACATGAGCCCCCGGGCTGAGCGGCGGGGCCGGCCAGGCAGACAGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| CDS-3UTR GCA 90 bp | CGGGGCATCCAGGTCCCGATACTCCACTATGGCCCTTGGGTCTCCTCGAACCATGATATTCACCCCGACTaGGGCGCTCCCGGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGIQVPILHYGPWVSSNHDIHPD*GAPGHG Trigger: ACCGTGGCCGGGAGCGCCGCAGTCGGGGTGAATATC...ATGGTTCGAGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | AGCTTCTCATCTCTCTCCACGTTGATCTCGGCTGGGTaGCCCTCCTTGGGAGGCTCCTCAGGAGGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSSLSTLISAG*PSLGGSSGGGP Trigger: GGGACCCCCTCCTGAGGAGCCTCCCAAGGAGGGCAACCCAGCCGAGATCAACGTGGAGAGAGATGAGAAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | CCGGGGCATCCAGGTCCCGATACTCCACTATGGCCCTaGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGHPGPDTPLWP*GLLEPSCSEVS Trigger: GGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR TCA 90 bp | ACATCATCCGGGGCATCCAGGTCCCGATACTCCACTATGGCCCTTGGGTCTCCTGGACATGGTGCTGCATaGTGTGGACGTCTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSSGASRSRYSTMALGSPGHGAA*CGRLGG Trigger: GCCACCCAGACGTCCACATCATGCAGCACCATGTCC...AGGAGACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGGATGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCCATGATGTGGACGTCTaGGTGGCCCCAGGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTPGLSSHSRSRMFCRFHDVDV*VAPGLR Trigger: CCTCAGCCCTGGGGCCACCCAGACGTCCACATCATG...GAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCATAGCCCAAGATGGGAGGCCGGGGCTGACCATATGGCATCAAGCCCTCCTCCTCTTTCTTGCTaGCCTCCCCAGTCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHSPRWEAGADHMASSPPPLSC*PPQSCL Trigger: CAGGCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGG...AGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGCAATCTCTGCGATGCTaGCCAGCCTGGCCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFTPGLSSHSRSRMFCRQSLRC*PAWPGW Trigger: CCATCCAGGCCAGGCTGGGCAGCATCGCAGAGATTG...CCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGGGGTGGAGGTGGGTTTGCTCCGAGCTCCGTCGATGAGCGGGTGTAGTGCCAGGAAAAAGTCCTaGATCTGCTGCCTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGVEVGLLRAPSMSGCSARKKS*ICCLRK Trigger: CTTCCGAAGGCAGCAGATGCAGGACTTTTTCCTGGC...ACTACACCCGCTCATCGACGGAGCTCGGAGCAAACCCACCTCCACCCCCACCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGCCGGGGCTGACCATATGGCATCAAGCCCTGTGGCGTCTGATGTGGGTAGAGAGCAAGTCTTATaGAAGGGCCGGGGCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: WEAGADHMASSPVASDVGREQVL*KGRGLH Trigger: GTGTAAGCCCCGGCCCTTGCATAAGACTTGCTCTCT...ACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | AGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATTCTCCTCCTCGGCCTaGCCACCCTCAGACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RITALASKSIIVPTAGTIFSSSA*PPSDSD Trigger: GTCCGAGTCTGAGGGTGGCCAGGCCGAGGAGGAGAA...TATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | ACGGGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATTATGGGTCAGAGCTGTaGTCATCCCAGTCTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVSVHTGTQFTLPEPNYGSEL*SSQSLR Trigger: GCGGAGAGACTGGGATGAGCACAGCTCTGACCCATA...ATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | CACTATGGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATAGGGCCTCCTCTTTCTTaGTGGCCTCCCCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HYGPWVSSNHPVPRFPRIGPPLS*WPPQSC Trigger: GCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCC...TATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTTCCTCAGAAAGGGATTCACGCACACTCAACAGTGGAGTCAGTTTCTCTGCCCAGCCTGGCCTaGATGGGCAGGACATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLPQKGIHAHSTVESVSLPSLA*MGRTWC Trigger: GCACCATGTCCTGCCCATCCAGGCCAGGCTGGGCAG...AGAAACTGACTCCACTGTTGAGTGTGCGTGAATCCCTTTCTGAGGAAGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | GGCATGGGCCCCCGAACGTGGATTATGCCACAGCGGTaGGGCATCTCGTCTTCATTAGGGTACTCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMGPRTWIMPQR*GISSSLGYSQV Trigger: CACCTGTGAGTACCCTAATGAAGACGAGATGCCCAACCGCTGTGGCATAATCCACGTTCGGGGGCCCATGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGGGGTGGAGGTGGGTTTGCTCCGAGCTCCGTCGATGAGCGGGTGTAGTACAGGAGGAACTCTTTaGAGGACTTCATTATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MVGVEVGLLRAPSMSGCSTGGTL*RTSLWA Trigger: CGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTGT...ACTACACCCGCTCATCGACGGAGCTCGGAGCAAACCCACCTCCACCCCCACCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTAGACCACTGCATTGTGCACAGCGGTGCCCTGCCTGTCTGCCTGGCCGGCATTGTAGCGTTTAACTaGCTCTGTCTCATCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLDHCIVHSGALPVCLAGIVAFN*LCLIHR Trigger: TCTGTGGATGAGACAGAGGCAGTTAAACGCTACAAT...GCCGGCCAGGCAGACAGGCAGGGCACCGCTGTGCACAATGCAGTGGTCTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223263.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGGTCCTGTCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTTGATGGGGCCTCCTCTTTCTTaGTGGCCTCCCCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWVLSSSVWISLAANLMGPPLS*WPPQSC Trigger: GCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCC...CATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CCA 90 bp | TCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACTGGTGCTGCATGATGTaGACGTCTGGGTGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSQDNRLGLEKHHSSHWCCMM*TSGWPQ Trigger: CTGGGGCCACCCAGACGTCCACATCATGCAGCACCA...GTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTGTTCACACCGCGATGCTGCCCAGCCTaGCCTGGATGGGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CVMPFMLRTRRVRSLFTPRCCPA*PGWAGH Trigger: ATGTCCTGCCCATCCAGGCCAGGCTGGGCAGCATCG...CGGTGTGAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | TCCAAGACCTTGATCAGCTTCTCATCTCTCTCCACGTaGATCTCGGCTGGGTTGCCCTCCTTGGGAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKTLISFSSLST*ISAGLPSLGGS Trigger: GGAGCCTCCCAAGGAGGGCAACCCAGCCGAGATCAACGTGGAGAGAGATGAGAAGCTGATCAAGGTCTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | AACCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTaGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHPVPRFPRITA*ASKSIIVPTAG Trigger: GCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | TCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCAGGACATGGTGCTaGATGATGTGGACGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSQDNRLGLEKHHSSHGRTWC*MMWTSG Trigger: CCCAGACGTCCACATCATGCAGCACCATGTCCTGCC...GTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | CGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTGCGGTTCTCCTCCTCGGCCTaGCCACCCTCAGACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSRMFCRFQQISLMLTLRFSSSA*PPSDSD Trigger: GTCCGAGTCTGAGGGTGGCCAGGCCGAGGAGGAGAA...CCGCAGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCGATCTTCTCGGCATGCTTATTGAAGATATGCTTGCGCACAAACTCCGGGCCCCAAGTCAATCTCTaGGATGCTGCCCAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFSACLLKICLRTNSGPQVNL*DAAQPG Trigger: GCCAGGCTGGGCAGCATCGCAGAGATTGACTTGGGG...CCCGGAGTTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | CACTATGGCCCTTGGGTCTCCTCGAACCATCCTGTTCCGAGGTTTCCCAGGATATCCTCCTCCTCCTCCTaGTCCAAAATTCGGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: HYGPWVSSNHPVPRFPRISSSSS*SKIRRS Trigger: CGATCTCCGAATTTTGGAGCAGGAGGAGGAGGAGGA...TATCCTGGGAAACCTCGGAACAGGATGGTTCGAGGAGACCCAAGGGCCATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | CGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTAGAGAGCAAGTCTTATaGAAGGGCCGGGGCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSVHTPGAECSAGSNRSREQVL*KGRGLH Trigger: GTGTAAGCCCCGGCCCTTGCATAAGACTTGCTCTCT...AGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTTCCTCAGAAAGGGATTCACGCACACTCAACAGTGGAGTCAGTTTCTAACCTCCTCTCTGGCTaGGGCTCTGACAGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GPLPQKGIHAHSTVESVSNLLSG*GSDSAT Trigger: AGTGGCACTGTCAGAGCCCCAGCCAGAGAGGAGGTT...AGAAACTGACTCCACTGTTGAGTGTGCGTGAATCCCTTTCTGAGGAAGAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | GGCAAAGCTGGGCGCTTGGCGTCTGTGAGAAAGTTATaGAAGAACGCCACCTCCTTCTTCACCTCCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGRLASVRKL*KNATSFFTSSI Trigger: GATCGAGGAGGTGAAGAAGGAGGTGGCGTTCTTCAATAACTTTCTCACAGACGCCAAGCGCCCAGCTTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR TCA 90 bp | ACGGGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATCTGCATCTAGCATCTTaGCAATGGCATCAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGQVSVHTGTQFTLPEPNLHLAS*QWHQLC Trigger: ACAAAGCTGATGCCATTGTCAAGATGCTAGATGCAG...ATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTAATGATCTCTGCCCTTaGAATGTTGGGTGCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGLCSHRDSVHTPGAECNDLCP*NVGCDV Trigger: AACATCGCACCCAACATTTCAAGGGCAGAGATCATT...ACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | ACGGGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATAATGATCTCTGCCCTTaGAATGTTGGGTGCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGQVSVHTGTQFTLPEPNNDLCP*NVGCDV Trigger: AACATCGCACCCAACATTTCAAGGGCAGAGATCATT...ATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATCTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCSEVSQDNRLGLEKHHLSSPL*FLFRFL Trigger: CAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAG...ATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | TCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACCAGCCTGGCCTGGATaGGCAGGACATGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRTICLCCVMPFMLRTRPAWPG*AGHGAA Trigger: TGCAGCACCATGTCCTGCCCATCCAGGCCAGGCTGG...TCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | CGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTaGCGGACACGACGGGTCAGGTCTCTGTTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: RTICLCCVMPFM*RTRRVRSLFTP Trigger: CGGTGTGAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| 3UTR CAA 72 bp | CAGAGCTGGGTCCTGTCATCCAGTGTGTGGATTAGCTaGGCTGCCAACTTGATGTCATTGCGCACTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWVLSSSVWIS*AANLMSLRTIC Trigger: GCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTCACTCCTCGTCTTTGTaGGCCAGGAAAAAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLCNAIYVADTTGQVSHSSSL*ARKKSC Trigger: GCAGGACTTTTTCCTGGCTCACAAAGACGAGGAGTG...AGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR TCA 90 bp | TCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTTGATGTCATTGCGCACTATCCTCTGGCTGGGGCTCTaGCAGTGCCACTCGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSVWISLAANLMSLRTILWLGL*QCHSHK Trigger: TTTATGCGAGTGGCACTGTCAGAGCCCCAGCCAGAG...GATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATCACTCGCATAAAGCCTaGGTATCGTTTACAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGQVSVHTGTQFTLPEPNHSHKA*VSFTKR Trigger: TCTCTTTGTAAACGATACCCAGGCTTTATGCGAGTG...ATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CCA 90 bp | TCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTTGATGTCATTGCGCACTATCAACCTCCTCTCTGGCTaGGGCTCTGACAGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSSVWISLAANLMSLRTINLLSG*GSDSAT Trigger: AGTGGCACTGTCAGAGCCCCAGCCAGAGAGGAGGTT...GATAGTGCGCAATGACATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | GACAAACTTCTCCACTTCCTGCTCTGGGTCTTTTCGACCCATCTTCTGGGCCTCACAGGAGGAACTCTTTaGAGGACTTCATTATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DKLLHFLLWVFSTHLLGLTGGTL*RTSLWA Trigger: CGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTGT...GAGGCCCAGAAGATGGGTCGAAAAGACCCAGAGCAGGAAGTGGAGAAGTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTGTTCCCTTATCATTGGCTTTaGGCTCTCCTTCTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCVMPFMLRTRRVRSLFPYHWL*ALLLPG Trigger: CCCTGGGAGAAGGAGAGCGCAAAGCCAATGATAAGG...GAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACTGGATGGGCAGGACATaGTGCTGCATGATGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPNVLQVPTDLLNVNWMGRT*CCMMWT Trigger: CGTCCACATCATGCAGCACCATGTCCTGCCCATCCA...GTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | GGCGTCTGTGAGAAAGTTATTGAAGAACGCCACCTCCTTCTTCACCTCCTCGATCCCACCTCATCAGGGTaGTACTTAGATCGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVCEKVIEERHLLLHLLDPTSSG*YLDRNH Trigger: GTGGTTCCGATCTAAGTACCACCCTGATGAGGTGGG...ATCGAGGAGGTGAAGAAGGAGGTGGCGTTCTTCAATAACTTTCTCACAGACGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGCACTCGCATAAAGCCTaGGTATCGTTTACAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFTPGLSSHSRSRMFCRHSHKA*VSFTKR Trigger: TCTCTTTGTAAACGATACCCAGGCTTTATGCGAGTG...CCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| 3UTR CAA 72 bp | TCCTTCTTCACCTCCTCGATCTTCTCGGCATGCTTATaGAAGATATGCTTGCGCACAAACTCCGGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFFTSSIFSACL*KICLRTNSGPL Trigger: CAAGGGCCCGGAGTTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGAGGTGAAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR TCA 90 bp | GTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTGTTCACGTGCGATGTTGCGCATaGAGAGAGAGCAAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLCNAIYVADTTGQVSVHVRCCA*RESKSY Trigger: ATAAGACTTGCTCTCTCTTCATGCGCAACATCGCAC...GTGAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTGTTCACACCGTGCGATGTTGCGCATaGAGAGAGAGCAAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LCNAIYVADTTGQVSVHTVRCCA*RESKSY Trigger: ATAAGACTTGCTCTCTCTTCATGCGCAACATCGCAC...GGTGTGAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGCTCTGGCTGGGGCTCTaGCAGTGCCACTCGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSLRTICLCCVMPFMLRLWLGL*QCHSHK Trigger: TTTATGCGAGTGGCACTGTCAGAGCCCCAGCCAGAG...CCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTGCGGTCATGGGCAGGACATGGTaGTGCATGATGTGGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPNVLQVPTDLLNVNTAVMGRTW*CMMWTS Trigger: AGACGTCCACATCATGCAGCACCATGTCCTGCCCAT...GACCGCAGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | TTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAAGTCCTGCATCTGCTaGCTTCGGAAGTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLPEPNVLQVPTDLLNVKSCIC*LRKSSL Trigger: CAAGCTGGACTTCCGAAGGCAGCAGATGCAGGACTT...AACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAGTTATTGAAGAACGCCACCTCCTTCTTCACCTCCTCGATCTTCTCGGCAGCCAGGAAAAAGTCCTaGATCTGCTGCCTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLLKNATSFFTSSIFSAARKKS*ICCLRK Trigger: CTTCCGAAGGCAGCAGATGCAGGACTTTTTCCTGGC...TGCCGAGAAGATCGAGGAGGTGAAGAAGGAGGTGGCGTTCTTCAATAACTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | GAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTGCGGTCTCCTCCTCCTCCTCCTaGTCCAAAATTCGGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: EPNVLQVPTDLLNVNTAVSSSSS*SKIRRS Trigger: CGATCTCCGAATTTTGGAGCAGGAGGAGGAGGAGGA...GACCGCAGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCTGCCAACTTGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCACCTTATCATTGGCTTTaGGCTCTCCTTCTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAANLMSLRTICLCCVMPPYHWL*ALLLPG Trigger: CCCTGGGAGAAGGAGAGCGCAAAGCCAATGATAAGG...TGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCTGTTCCGAGGTTTCCCAGGATAACCGCCTTGGCCTCGAAAAGCATCATTCCTGTTCCGCTTCTTaGTCTTACCTTTTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSCSEVSQDNRLGLEKHHSCSAS*SYLFGF Trigger: GAAGCCAAAAAGGTAAGAGCAAGAAGCGGAACAGGA...ATGATGCTTTTCGAGGCCAAGGCGGTTATCCTGGGAAACCTCGGAACAGGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CCA 90 bp | CTTGATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGCCTCCTCTTTCTTGCTaGCCTCCCCAGTCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDVIAHYLLVLCNAIYVAPPLSC*PPQSCL Trigger: CAGGCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGG...CGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGGTCCTGTCATCCAGTGTGTGGATTAGCTTGGCTGCCAACTTGATGATTGTAGCGTTTAACTaGCTCTGTCTCATCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSWVLSSSVWISLAANLMIVAFN*LCLIHR Trigger: TCTGTGGATGAGACAGAGGCAGTTAAACGCTACAAT...CATCAAGTTGGCAGCCAAGCTAATCCACACACTGGATGACAGGACCCAGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | GAAATGATCTCTGCCCTTGAAATGTTGGGTGCGATGTaGCGCATGAAGAGAGAGCAAGTCTTATGCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMISALEMLGAM*RMKREQVLCKG Trigger: GCCCTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199365.5 |
||
| 3UTR CAA 72 bp | AATTTCTTGCCACTGAGAGGACATAGCCACTTATCCTaGCCCAGTTCCTGCGTGTTGGAGGTGACAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFLPLRGHSHLS*PSSCVLEVTNF Trigger: GAAGTTTGTCACCTCCAACACGCAGGAACTGGGCAAGGATAAGTGGCTATGTCCTCTCAGTGGCAAGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| 3UTR CAA 72 bp | TCCTCGATCTTCTCGGCATGCTTATTGAAGATATGCTaGCGCACAAACTCCGGGCCCTTGAATTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSIFSACLLKIC*RTNSGPLNFLP Trigger: TGGCAAGAAATTCAAGGGCCCGGAGTTTGTGCGCAAGCATATCTTCAATAAGCATGCCGAGAAGATCGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | TGCTCATCCCCAAGGGATAAAAGGGACAAAGGAACGCTGGGTGTGTGGGATACTAACGGTCATAATCGCTaGGCTCTCTTCGAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSPRDKRDKGTLGVWDTNGHNR*ALFEIC Trigger: ACAAATTTCGAAGAGAGCGCAGCGATTATGACCGTT...AGTATCCCACACACCCAGCGTTCCTTTGTCCCTTTTATCCCTTGGGGATGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197484.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTTCCTGTTCCGCTTCTTaGTCTTACCTTTTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICLCCVMPFMLRTRRVRSSCSAS*SYLFGF Trigger: GAAGCCAAAAAGGTAAGAGCAAGAAGCGGAACAGGA...AGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR TCA 90 bp | ACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACCTGCATCTAGCATCTTaGCAATGGCATCAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPNVLQVPTDLLNVNLHLAS*QWHQLC Trigger: ACAAAGCTGATGCCATTGTCAAGATGCTAGATGCAG...GTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR GCA 90 bp | ACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGAACGGTCATAATCGCTaGGCTCTCTTCGAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TICLCCVMPFMLRTRRVRNGHNR*ALFEIC Trigger: ACAAATTTCGAAGAGAGCGCAGCGATTATGACCGTT...CCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR GCA 90 bp | CGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTGCGGTCAAAACTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RMFCRFQQISLMLTLRSKLSSPL*FLFRFL Trigger: CAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAG...TTTTGACCGCAGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| 3UTR CAA 72 bp | TTGGCTGCCAACTTGATGTCATTGCGCACTATCTGCTaGTGCTGTGTAATGCCATTTATGTTGCGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: LAANLMSLRTIC*CCVMPFMLRTR Trigger: TCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACATCAAGTTGGCAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198526.5 ENSMUST00000199365.5 ENSMUST00000199605.2 |
||
| CDS GCA 90 bp | AGCGCTCCCTTCGGTTCCTGTCGTAGTCTCGATATTCACCCCGACTaGGGCGCTCCCGGCCACGGTCCCACTCTCGGTCATTCCAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPFGSCRSLDIHPD*GAPGHGPTLGHSNR Trigger: ACGATTGGAATGACCGAGAGTGGGACCGTGGCCGGGAGCGCCGCAGTCGGGGTGAATATCGAGACTACGACAGGAACCGAAGGGAGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS CCA 90 bp | TGTTGGGACTCCATAGCCCAAGATGGGAGGCCGGGGCTGACCATATaGCATCAAGCCCTGTGGCGTCTGATGTGGGTAGGGAAGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWDSIAQDGRPGLTI*HQALWRLMWVGKSW Trigger: CCAGGACTTCCCTACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGAGTCCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197466.5 ENSMUST00000199243.5 |
||
| CDS CCA 90 bp | GCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATaGAGCATGGGGGTATGGAGGCCCTCCTGTTGGGACTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALASKSIIVPTAGTI*SMGVWRPSCWDSIA Trigger: GGCTATGGAGTCCCAACAGGAGGGCCTCCATACCCCCATGCTCCATATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197466.5 ENSMUST00000199243.5 |
||
| CDS CCA 90 bp | TCCTTTTCTTTAAGTGCTTCGGCCTCCTCCTTCTCCTCCTCGGCCTaGCCACCCTCAGACTCGGACTCAGACTCGGACACACTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSLSASASSFSSSA*PPSDSDSDSDTLPS Trigger: TGAGGGCAGTGTGTCCGAGTCTGAGTCCGAGTCTGAGGGTGGCCAGGCCGAGGAGGAGAAGGAGGAGGCCGAAGCACTTAAAGAAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199605.2 |
||
| CDS CCA 90 bp | CTTCTCATCCTTATCATTGGCTTTGCGCTCTCCTTCTCCCAGGGCTaGTCCAGCACGGGCCTCCTCTTTCTTGCTGGCCTCCCCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLILIIGFALSFSQG*SSTGLLFLAGLPSL Trigger: AAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCCGTGCTGGACCAGCCCTGGGAGAAGGAGAGCGCAAAGCCAATGATAAGGATGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000199605.2 |
||
| CDS CCA 90 bp | ATCCAGAGACAGGAGGAACTCTTTGAAGGACTTCATTATGGGCGGTaGCACCCCCAAGTCAATCTCTGCGATGCTGCCCAGCCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQRQEELFEGLHYGR*HPQVNLCDAAQPGL Trigger: CAGGCCAGGCTGGGCAGCATCGCAGAGATTGACTTGGGGGTGCCACCGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTGTCTCTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCTCTGCCCTTGAAATGTaGGGTGCGATGTTGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LFTPGLSSHSRSRMFCRFSALEM*GAMLRM Trigger: CATGCGCAACATCGCACCCAACATTTCAAGGGCAGA...GAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS GCA 90 bp | CCCCTCGCCGTCTTTCATCCCTTTCCCGGGAACGGTCATAATCGCTaGGCTCTCTTCGAAATTTGTCCCTGCGTCTTCGGTCGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLAVFHPFPGNGHNR*ALFEICPCVFGRIH Trigger: ATGAATACGACCGAAGACGCAGGGACAAATTTCGAAGAGAGCGCAGCGATTATGACCGTTCCCGGGAAAGGGATGAAAGACGGCGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000197484.2 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS GCA 90 bp | TCAGACTCGGACACACTGCCCTCATCGAAGCTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTGCTCTTTTTGGCTTCCTTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SDSDTLPSSKLSSPL*FLFRFLLFLASFSA Trigger: GGCTGAGAAGGAAGCCAAAAAGAGCAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAGCTTCGATGAGGGCAGTGTGTCCGAGTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000199243.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCATAGCCCAAGATGGGAGGCCGGGGCTGACCATATGGCATCAAGCCCTACAATGGCATCAGCTTaGTCTATGTCCAAGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLHSPRWEAGADHMASSPTMASA*SMSKRR Trigger: CCTTCTCTTGGACATAGACAAAGCTGATGCCATTGT...AGGGCTTGATGCCATATGGTCAGCCCCGGCCTCCCATCTTGGGCTATGGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTCGGGCCTCCTCTTTCTaGCTGGCCTCCCCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPEPNVLQVPTDLLNVNTRASSF*LASPVL Trigger: CAAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCCG...AGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS TCA 90 bp | CCTCTGTCTCATCCACAGAGTCATCCAGAGACAGGAGGAACTCTTTaGAGGACTTCATTATGGGCGGTGGCACCCCCAAGTCAATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSHPQSHPETGGTL*RTSLWAVAPPSQSL Trigger: CAGAGATTGACTTGGGGGTGCCACCGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTGTCTCTGGATGACTCTGTGGATGAGACAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000223263.2 |
||
| CDS GCA 90 bp | TCAGACTCGGACACACTGCCCTCATCGAAGCTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTGCTCTTACCTTTTTGGCTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDSDTLPSSKLSSPL*FLFRFLLLPFWLPS Trigger: AGAAGGAAGCCAAAAAGGTAAGAGCAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAGCTTCGATGAGGGCAGTGTGTCCGAGTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGTCTCTGTTCACACCGGGACTCAGTTCACACTCCCGGAGCCGAATGTTTTCCTGTTCCGCTTCTaGCTCTTACCTTTTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQVSVHTGTQFTLPEPNVFLFRF*LLPFWL Trigger: AAGCCAAAAAGGTAAGAGCAAGAAGCGGAACAGGAA...AACATTCGGCTCCGGGAGTGTGAACTGAGTCCCGGTGTGAACAGAGACCTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS TCA 90 bp | GCCCCTAAGACCGATGTCCCCACTCACAGAAATGATCTCTGCCCTTaGAATGTTGGGTGCGATGTTGCGCATGAAGAGAGAGCAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: APKTDVPTHRNDLCP*NVGCDVAHEERASL Trigger: AAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTGTGAGTGGGGACATCGGTCTTAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196109.5 |
||
| CDS GCA 90 bp | CTGCTGCCTTCGGAAGTCCAGCTTGTAGTCATTGTAGCGTTTAACTaGCTCTGTCTCATCCACAGAGTCATCCAGAGACAGGAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSEVQLVVIVAFN*LCLIHRVIQRQEEL Trigger: GAGTTCCTCCTGTCTCTGGATGACTCTGTGGATGAGACAGAGGCAGTTAAACGCTACAATGACTACAAGCTGGACTTCCGAAGGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000223263.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTTCACACTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTGGGTGCGATGTaGCGCATGAAGAGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSHSRSRMFCRFQQISLMLGAM*RMKREQ Trigger: TTGCTCTCTCTTCATGCGCAACATCGCACCCAACAT...TAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAGTGTGAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | GCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTATGTTGGGTGCGATGTaGCGCATGAAGAGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AHYLLVLCNAIYVADTTGMLGAM*RMKREQ Trigger: TTGCTCTCTCTTCATGCGCAACATCGCACCCAACAT...ACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | ACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTGCCCTTGAAATGTaGGGTGCGATGTTGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TICLCCVMPFMLRTRRVRSALEM*GAMLRM Trigger: CATGCGCAACATCGCACCCAACATTTCAAGGGCAGA...CCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | AGGATAACCGCCTTGGCCTCGAAAAGCATCATAGTTCCCACGGCCGGCACCATATTCCTGTTCCGCTTCTaGCTCTTACCTTTTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RITALASKSIIVPTAGTIFLFRF*LLPFWL Trigger: AAGCCAAAAAGGTAAGAGCAAGAAGCGGAACAGGAA...TATGGTGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CAA 90 bp | ATGGCTCAAAAGAAGTCAACATCATCCGGGGCATCCAGGTCCCGATACTCCACTGCTGCATCTAGCATCTaGACAATGGCATCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MAQKKSTSSGASRSRYSTAASSI*TMASAL Trigger: CAAAGCTGATGCCATTGTCAAGATGCTAGATGCAGC...AGTGGAGTATCGGGACCTGGATGCCCCGGATGATGTTGACTTCTTTTGAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198526.5 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTCTGTTCGCTGCATCTAGCATCTaGACAATGGCATCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCCVMPFMLRTRRVRSLFAASSI*TMASAL Trigger: CAAAGCTGATGCCATTGTCAAGATGCTAGATGCAGC...GAACAGAGACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | TATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACACGACGGGTCAGGTCTTCTCATCCTTATCATaGGCTTTGCGCTCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLLVLCNAIYVADTTGQVFSSLS*ALRSPS Trigger: AGAAGGAGAGCGCAAAGCCAATGATAAGGATGAGAA...GACCTGACCCGTCGTGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCGGAGCCGAATGTTCTGCAGGTTCCAACAGATCTCCTTAATGTTAACACTTTCTCATCCTTATCATaGGCTTTGCGCTCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPEPNVLQVPTDLLNVNTFSSLS*ALRSPS Trigger: AGAAGGAGAGCGCAAAGCCAATGATAAGGATGAGAA...AGTGTTAACATTAAGGAGATCTGTTGGAACCTGCAGAACATTCGGCTCCGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATTGCGCACTATCTGCTTGTGCTGTGTAATGCCATTTATGTTGCGGACAACAATGGCATCAGCTTaGTCTATGTCCAAGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSLRTICLCCVMPFMLRTTMASA*SMSKRR Trigger: CCTTCTCTTGGACATAGACAAAGCTGATGCCATTGT...TGTCCGCAACATAAATGGCATTACACAGCACAAGCAGATAGTGCGCAATGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS TCA 72 bp | CCAGCCTGGCCTGGATGGGCAGGACATGGTGCTGCATaGTGTGGACGTCTGGGTGGCCCCAGGGCTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAWPGWAGHGAA*CGRLGGPRAEG Trigger: CCCCTCAGCCCTGGGGCCACCCAGACGTCCACATCATGCAGCACCATGTCCTGCCCATCCAGGCCAGGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS CCA 72 bp | GCGATGCTGCCCAGCCTGGCCTGGATGGGCAGGACATaGTGCTGCATGATGTGGACGTCTGGGTGGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AMLPSLAWMGRT*CCMMWTSGWPQ Trigger: CTGGGGCCACCCAGACGTCCACATCATGCAGCACCATGTCCTGCCCATCCAGGCCAGGCTGGGCAGCATCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS GCA 72 bp | CTCCCAGGGCTGGTCCAGCACGGGCCTCCTCTTTCTTaGTGGCCTCCCCAGTCTTGCCTGCCTGTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPGLVQHGPPLS*WPPQSCLPVPP Trigger: AGGAGGAACAGGCAGGCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCCGTGCTGGACCAGCCCTGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000199605.2 |
||
| CDS CAA 72 bp | TCTCCCAGGGCTGGTCCAGCACGGGCCTCCTCTTTCTaGCTGGCCTCCCCAGTCTTGCCTGCCTGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPRAGPARASSF*LASPVLPACSS Trigger: GGAGGAACAGGCAGGCAAGACTGGGGAGGCCAGCAAGAAAGAGGAGGCCCGTGCTGGACCAGCCCTGGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000199605.2 |
||
| CDS GCA 72 bp | TTCGGTTCCTGTCGTAGTCTCGATATTCACCCCGACTaGGGCGCTCCCGGCCACGGTCCCACTCTCGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FGSCRSLDIHPD*GAPGHGPTLGH Trigger: ATGACCGAGAGTGGGACCGTGGCCGGGAGCGCCGCAGTCGGGGTGAATATCGAGACTACGACAGGAACCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS CCA 72 bp | CTGACCATATGGCATCAAGCCCTGTGGCGTCTGATGTaGGTAGGGAAGTCCTGGGGTCAGGCTCTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTIWHQALWRLM*VGKSWGQALGR Trigger: CCTGCCCAGAGCCTGACCCCAGGACTTCCCTACCCACATCAGACGCCACAGGGCTTGATGCCATATGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197466.5 ENSMUST00000199756.3 |
||
| CDS CCA 72 bp | CAGGAGGAACTCTTTGAAGGACTTCATTATGGGCGGTaGCACCCCCAAGTCAATCTCTGCGATGCTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QEELFEGLHYGR*HPQVNLCDAAQ Trigger: CTGGGCAGCATCGCAGAGATTGACTTGGGGGTGCCACCGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000223263.2 |
||
| CDS TCA 72 bp | GGGTGGTACTTAGATCGGAACCACTCCTCGTCTTTGTaGGCCAGGAAAAAGTCCTGCATCTGCTGCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GWYLDRNHSSSL*ARKKSCICCLR Trigger: CCGAAGGCAGCAGATGCAGGACTTTTTCCTGGCTCACAAAGACGAGGAGTGGTTCCGATCTAAGTACCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS GCA 72 bp | GACACACTGCCCTCATCGAAGCTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTGCTCTTTTTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DTLPSSKLSSPL*FLFRFLLFLAS Trigger: GGAAGCCAAAAAGAGCAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAGCTTCGATGAGGGCAGTGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000199243.5 |
||
| CDS GCA 72 bp | GTCTTTCATCCCTTTCCCGGGAACGGTCATAATCGCTaGGCTCTCTTCGAAATTTGTCCCTGCGTCTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFHPFPGNGHNR*ALFEICPCVFG Trigger: ACCGAAGACGCAGGGACAAATTTCGAAGAGAGCGCAGCGATTATGACCGTTCCCGGGAAAGGGATGAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000197484.2 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS GCA 72 bp | GACACACTGCCCTCATCGAAGCTGTCATCGCCACTCTaGTTCCTGTTCCGCTTCTTGCTCTTACCTTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DTLPSSKLSSPL*FLFRFLLLPFW Trigger: CCAAAAAGGTAAGAGCAAGAAGCGGAACAGGAAGCAGAGTGGCGATGACAGCTTCGATGAGGGCAGTGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198526.5 ENSMUST00000199605.2 |
||
| CDS CAA 90 bp | GCCTCTGTCTCATCCACAGAGTCATCCAGAGACAGGAGGAACTCTTaGAAGGACTTCATTATGGGCGGTGGCACCCCCAAGTCAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASVSSTESSRDRRNS*KDFIMGGGTPKSIS Trigger: AGAGATTGACTTGGGGGTGCCACCGCCCATAATGAAGTCCTTCAAAGAGTTCCTCCTGTCTCTGGATGACTCTGTGGATGAGACAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000223263.2 |
||
| CDS CAA 90 bp | CCACTCACAGAAATGATCTCTGCCCTTGAAATGTTGGGTGCGATGTaGCGCATGAAGAGAGAGCAAGTCTTATGCAAGGGCCGGGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PLTEMISALEMLGAM*RMKREQVLCKGRGL Trigger: TAAGCCCCGGCCCTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTGTGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196109.5 |
||
| CDS TCA 72 bp | ACCGATGTCCCCACTCACAGAAATGATCTCTGCCCTTaGAATGTTGGGTGCGATGTTGCGCATGAAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TDVPTHRNDLCP*NVGCDVAHEER Trigger: TCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTGTGAGTGGGGACATCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196109.5 |
||
| CDS GCA 72 bp | GGTCATAATCGCTGCGCTCTCTTCGAAATTTGTCCCTaGGTCTTCGGTCGTATTCATCATCACTGTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHNRCALFEICP*VFGRIHHHCHP Trigger: TGGGTGACAGTGATGATGAATACGACCGAAGACGCAGGGACAAATTTCGAAGAGAGCGCAGCGATTATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000197484.2 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||
| CDS CAA 72 bp | TCCCCACTCACAGAAATGATCTCTGCCCTTGAAATGTaGGGTGCGATGTTGCGCATGAAGAGAGAGCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPLTEMISALEM*GAMLRMKREQV Trigger: GACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTGTGAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196109.5 |
||
| CDS CAA 90 bp | AGACCGATGTCCCCACTCACAGAAATGATCTCTGCCCTTGAAATGTaGGGTGCGATGTTGCGCATGAAGAGAGAGCAAGTCTTATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RPMSPLTEMISALEM*GAMLRMKREQVLCK Trigger: CTTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCACCCAACATTTCAAGGGCAGAGATCATTTCTGTGAGTGGGGACATCGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196109.5 |
||
| CDS CAA 72 bp | ACAGCTGCATCTAGCATCTTGACAATGGCATCAGCTTaGTCTATGTCCAAGAGAAGGTTATCAAACCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAASSILTMASA*SMSKRRLSNQP Trigger: TGGCTGGTTTGATAACCTTCTCTTGGACATAGACAAAGCTGATGCCATTGTCAAGATGCTAGATGCAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000199605.2 |
||
| CDS CAA 72 bp | CCACCTTCCATCTTAATGACAGCTGCATCTAGCATCTaGACAATGGCATCAGCTTTGTCTATGTCCAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPSILMTAASSI*TMASALSMSKR Trigger: TCTCTTGGACATAGACAAAGCTGATGCCATTGTCAAGATGCTAGATGCAGCTGTCATTAAGATGGAAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 ENSMUST00000199605.2 |
||
| CDS CAA 90 bp | ATCTTAATGACAGCTGCATCTAGCATCTTGACAATGGCATCAGCTTaGTCTATGTCCAAGAGAAGGTTATCAAACCAGCCACTCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ILMTAASSILTMASA*SMSKRRLSNQPLSM Trigger: CATGGAGAGTGGCTGGTTTGATAACCTTCTCTTGGACATAGACAAAGCTGATGCCATTGTCAAGATGCTAGATGCAGCTGTCATTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040873.12 ENSMUST00000197466.5 ENSMUST00000198526.5 ENSMUST00000199243.5 |
||