Pregenerated sensors for SRRM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039860Ensembl transcript IDs: ENSMUST00000013615.14, ENSMUST00000126232.8, ENSMUST00000144211.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGCGCGGGCTTTGTACGCCGGCGTCCCCTGCGGCGGGGCGCGTTaGCCGAGGACCGCGATCGTCTCCTCCTCCGTCGCCGACGCCGGC | + |
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Preference number: 1 (lower is better) Translates to: AARALYAGVPCGGAR*PRTAIVSSSVADAG Trigger: GCCGGCGTCGGCGACGGAGGAGGAGACGATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTACAAAGCCCGCGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR TCA 90 bp | GCGGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTGCGCGATaGGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: AAGAPGALMGTRAAR*AVALWAAPSAARAR Trigger: CCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR GCA 90 bp | AGGGCGAGCGGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTaGGCGATGAGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCGCG | + |
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Preference number: 1 (lower is better) Translates to: RASGWSSRSPDGDPG*AMSCCPLGRPVGRA Trigger: CGCGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGCCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR TCA 90 bp | GCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTaGCCTGTTTGGTCATCTGACTGCCTTGTTTGGGCCCATGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: AHNPDSSLYLSPSSP*PVWSSDCLVWAHAL Trigger: TAAAGCATGGGCCCAAACAAGGCAGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR GCA 90 bp | CCAGGGTGCTGGGATTACAGGCATGCACTAGCATGCTCGGTTTTATaGTTTGTTTGGGATGGAACCCAGGACTTCACGCATGCTAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: PGCWDYRHALACSVL*FVWDGTQDFTHARQ Trigger: TTGCCTAGCATGCGTGAAGTCCTGGGTTCCATCCCAAACAAAGCATAAAACCGAGCATGCTAGTGCATGCCTGTAATCCCAGCACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR CCA 90 bp | TGGGATTACAGGCATGCACTAGCATGCTCGGTTTTATGCTTTGTTTaGGATGGAACCCAGGACTTCACGCATGCTAGGCAAGCATTCTAC | + |
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Preference number: 1 (lower is better) Translates to: WDYRHALACSVLCFV*DGTQDFTHARQAFY Trigger: GTAGAATGCTTGCCTAGCATGCGTGAAGTCCTGGGTTCCATCCCAAACAAAGCATAAAACCGAGCATGCTAGTGCATGCCTGTAATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGAGGTGCTATTCCCGTGTCCGCCGTaGCCTCGCTCGGAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPSGPPRRPRVPGDGEVLFPCPP*PRSEQG Trigger: GCCCTGCTCCGAGCGAGGTCACGGCGGACACGGGAA...TAGCACCTCGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR GCA 90 bp | GCGCCGCTTTCGGATGGGCGAGTAGCTGCGGGAGCGACGCCGGGTGCGGGCGGCTGCGCGATGAGCTGTTaGCCTCTGGGCCGCCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: APLSDGRVAAGATPGAGGCAMSC*PLGRPV Trigger: GACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCA...GCCGCCCGCACCCGGCGTCGCTCCCGCAGCTACTCGCCCATCCGAAAGCGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGATGGAGTGTGCCCCGCTaGGCGAGCGCGACGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ASASACLARPSLSLSLPRWSVPR*ASATSP Trigger: GGGGCTCGTCGCGCTCGCTCAGCGGGGCACACTCCA...TCTTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR CAA 90 bp | CGGGCGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTaGTCCCTGCCAAGAGGTTTCTTGGGCGACGGTGAGAGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RAASASACLARPSLS*SLPRGFLGDGERLG Trigger: CCCCAGCCTCTCACCGTCGCCCAAGAAACCTCTTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGAGCGGAGCGGGGACTCTaGCTGTCCTTCCCACGCGCG | + |
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Preference number: 2 (lower is better) Translates to: ASASACLARPSLSLSLPRAERGL*LSFPRA Trigger: CGCGCGTGGGAAGGACAGCCAGAGTCCCCGCTCCGC...TCTTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR CAA 90 bp | AGAGGTTTCTTGGGCGACGGTGAGAGGCTGGGGCTGCGGGTCCTTTaGTCTGGGGAGCGCGAGTGGGATTTGGAGGGCGAGCGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RGFLGDGERLGLRVL*SGEREWDLEGERLE Trigger: CTCCAGCCGCTCGCCCTCCAAATCCCACTCGCGCTCCCCAGACAAAAGGACCCGCAGCCCCAGCCTCTCACCGTCGCCCAAGAAACCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTTCTTGGGCGACGGTGAGAGGCTGGGGCTGCGGGTCCTTTTGTCTGGGGAGCGCGAGTGGGATTTaGAGGGCGAGCGGCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: EVSWATVRGWGCGSFCLGSASGI*RASGWS Trigger: GCTCCAGCCGCTCGCCCTCCAAATCCCACTCGCGCT...CCCCAGACAAAAGGACCCGCAGCCCCAGCCTCTCACCGTCGCCCAAGAAACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGCAATGGGCCCCAGGCTGGTAAGCTGGCCTCAAGCAGAAGAGGGGTGTGTTCCCTGGGCATGGTaGGTGGGCAGGGCGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TQAMGPRLVSWPQAEEGCVPWAW*VGRAWG Trigger: TCCCCACGCCCTGCCCACCCACCATGCCCAGGGAAC...ACACCCCTCTTCTGCTTGAGGCCAGCTTACCAGCCTGGGGCCCATTGCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR CAA 90 bp | GGTGGGCAGGGCGTGGGGATGGGCACACCTCAGGGGCAGGACAGTTaGATTCCTCCTCGTGTCGTGGGTGGTTCACCCACCCTAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: GGQGVGMGTPQGQDS*IPPRVVGGSPTLED Trigger: GTCTTCTAGGGTGGGTGAACCACCCACGACACGAGGAGGAATCAAACTGTCCTGCCCCTGAGGTGTGCCCATCCCCACGCCCTGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR GCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTCACTTGCCCACGTGCTaGCCCACCCCCACCCCGGGA | + |
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Preference number: 2 (lower is better) Translates to: IIWPITQTAACTCLPVALHLPTC*PTPTPG Trigger: TCCCGGGGTGGGGGTGGGGCAGCACGTGGGCAAGTG...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTCCTGGGCATGGTGGGTaGGCAGGGCGTGGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: IIWPITQTAACTCLPVALPGHGG*AGRGDG Trigger: CCCATCCCCACGCCCTGCCCACCCACCATGCCCAGG...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTACCTTCCGAGCTGTGTaGGGTGGGGGTGGGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: TAACTCLPVALDLFGHLTTFRAV*GGGGGV Trigger: GACACCCCCACCCCCACCCCACACAGCTCGGAAGGT...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGGCAGGGCGTGGGGATaGGCACACCTCAGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: YYSPNVFPHCGERGKGKLGRAWG*AHLRGR Trigger: CCTGCCCCTGAGGTGTGCCCATCCCCACGCCCTGCC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGTGGGTGGGCAGGGCGTaGGGATGGGCACACCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: YYSPNVFPHCGERGKGKLWVGRA*GWAHLR Trigger: CCTGAGGTGTGCCCATCCCCACGCCCTGCCCACCCA...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTCCTCGACCTCCAGGGTaGTGGGATTACAGGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: TAACTCLPVALDLFGHLTPRPPG*WDYRHA Trigger: TGCATGCCTGTAATCCCAGCACCCTGGAGGTCGAGG...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTCGACCTCCAGGGTGCTaGGATTACAGGCATGCACTA | + |
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Preference number: 2 (lower is better) Translates to: IIWPITQTAACTCLPVALRPPGC*DYRHAL Trigger: TAGTGCATGCCTGTAATCCCAGCACCCTGGAGGTCG...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR TCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGGCGTGGCCTTGATGTaGAGGCGAGGGAGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: YYSPNVFPHCGERGKGKLGVALM*RRGREM Trigger: CATCTCTCTCCCTCGCCTTCACATCAAGGCCACGCC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTAAGCATTCTACCAACTaGGATAGGGCCTCAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TAACTCLPVALDLFGHLTKHSTN*DRASAA Trigger: AGCAGCTGAGGCCCTATCTCAGTTGGTAGAATGCTT...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGGGCATCTGCCCTATTaGGCCAAGGAAGACTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: YYSPNVFPHCGERGKGKLGHLPY*AKEDFE Trigger: CTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTCTTATCTTCTGGCCTaGATTCCCAGTCTCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: TAACTCLPVALDLFGHLTSYLLA*IPSLSL Trigger: AAGTGAGAGACTGGGAATTCAGGCCAGAAGATAAGA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTTTTAGATCCACCCCGTaGGAGATAAAGAAAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: IIWPITQTAACTCLPVALFRSTP*EIKKEE Trigger: CTCCTCTTTCTTTATCTCCCACGGGGTGGATCTAAA...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTGTTTTATGCTTTGTTTaGGATGGAACCCAGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: TAACTCLPVALDLFGHLTVLCFV*DGTQDF Trigger: GAAGTCCTGGGTTCCATCCCAAACAAAGCATAAAAC...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGATGCTTTGTTTGGGATaGAACCCAGGACTTCACGCA | + |
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Preference number: 2 (lower is better) Translates to: YYSPNVFPHCGERGKGKLMLCLG*NPGLHA Trigger: TGCGTGAAGTCCTGGGTTCCATCCCAAACAAAGCAT...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR TCA 72 bp | CGCCGCCACCGGAGTCGCTGCTGGAGTGTGCCCCGCTaGGCGAGCGCGACGAGCCCCGAGGCGGCGCGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RRHRSRCWSVPR*ASATSPEAARA Trigger: AGCCCGCGCCGCCTCGGGGCTCGTCGCGCTCGCTCAGCGGGGCACACTCCAGCAGCGACTCCGGTGGCGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR TCA 72 bp | GCTCCAGGAGCCCTGATGGGGACCCGGGCTGCGCGATaGGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCG | + |
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Preference number: 3 (lower is better) Translates to: APGALMGTRAAR*AVALWAAPSAA Trigger: CGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR GCA 72 bp | TTCGGATGGGCGAGTAGCTGCGGGAGCGACGCCGGGTaGGGGCGGCCTCAGCCTCGGCGTGCCTCGCACGGC | + |
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Preference number: 3 (lower is better) Translates to: FGWASSCGSDAG*GRPQPRRASHG Trigger: GCCGTGCGAGGCACGCCGAGGCTGAGGCCGCCCGCACCCGGCGTCGCTCCCGCAGCTACTCGCCCATCCGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR GCA 72 bp | GCGAGTCCCGGCGCCGCTTTCGGATGGGCGAGTAGCTaGGGGAGCGACGCCGGGTGCGGGCGGCCTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ASPGAAFGWASS*GSDAGCGRPQP Trigger: AGGCTGAGGCCGCCCGCACCCGGCGTCGCTCCCGCAGCTACTCGCCCATCCGAAAGCGGCGCCGGGACTCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR GCA 72 bp | GAGCGACGCCGGGTGCGGGCGGCCTCAGCCTCGGCGTaGCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: ERRRVRAASASA*LARPSLSLSLP Trigger: TGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCCCGCACCCGGCGTCGCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR CCA 72 bp | GCTTTGTACGCCGGCGTCCCCTGCGGCGGGGCGCGTTaGCCGAGGACCGCGATCGTCTCCTCCTCCGTCGCC | + |
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Preference number: 3 (lower is better) Translates to: ALYAGVPCGGAR*PRTAIVSSSVA Trigger: GGCGACGGAGGAGGAGACGATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTACAAAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR GCA 72 bp | GGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTaGGCGATGAGCTGTTGCCCTCTGGGCCGCCCCGTC | + |
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Preference number: 3 (lower is better) Translates to: GWSSRSPDGDPG*AMSCCPLGRPV Trigger: GACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR CCA 72 bp | CTGGGGAGCGCGAGTGGGATTTGGAGGGCGAGCGGCTaGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LGSASGIWRASG*SSRSPDGDPGC Trigger: GCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGCCCTCCAAATCCCACTCGCGCTCCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR CAA 90 bp | CGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAACTGCGCGATGAGCTGTaGCCCTCTGGGCCGCCCCGT | + |
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Preference number: 3 (lower is better) Translates to: RPQPRRASHGLRCPCPCQLRDEL*PSGPPR Trigger: ACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAG...TTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR TCA 72 bp | GATTTGGAGGGCGAGCGGCTGGAGCTCCAGGAGCCCTaGTGGGGACCCGGGCTGCGCGATGAGCTGTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: DLEGERLELQEP*WGPGLRDELLP Trigger: GGGCAACAGCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGCCCTCCAAATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR-3UTR CAA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGGCCCCAGCCTCTCCTaGTTCCAGGGCCTTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: YYSPNVFPHCGERGKGKLGPSLS*FQGLPT Trigger: GGTTGGAAGGCCCTGGAACAAGGAGAGGCTGGGGCC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTAACTCTTGTGGACTCTaGTGCCATACACAGGCAATG | + |
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Preference number: 3 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPNSCGL*CHTQAM Trigger: CATTGCCTGTGTATGGCACAAGAGTCCACAAGAGTT...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CAA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGGGGAAGGTCCCAGCTaGGCACCTTCCGAGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: YYSPNVFPHCGERGKGKLGEGPS*APSELC Trigger: ACACAGCTCGGAAGGTGCCAAGCTGGGACCTTCCCC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CAA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTGGTTTTATGCTTTGTTaGGGATGGAACCCAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPGFMLC*GWNPGL Trigger: AAGTCCTGGGTTCCATCCCAAACAAAGCATAAAACC...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTCCCAGTCTCTCACTTTaGAGACAGATTCTCCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: TAACTCLPVALDLFGHLTPSLSL*RQILLY Trigger: GTACAGGAGAATCTGTCTCAAAAGTGAGAGACTGGG...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR CCA 72 bp | AGGCATGCACTAGCATGCTCGGTTTTATGCTTTGTTTaGGATGGAACCCAGGACTTCACGCATGCTAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RHALACSVLCFV*DGTQDFTHARQ Trigger: TTGCCTAGCATGCGTGAAGTCCTGGGTTCCATCCCAAACAAAGCATAAAACCGAGCATGCTAGTGCATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CCA 90 bp | CCCCCGCGGCCCTGCGACGACGGCGCGGAGCGGGGACTCTGGCTGTCCTTCCCATCCGCTGCCGCCCGATaGGGATGGCGACCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PPRPCDDGAERGLWLSFPSAAAR*GWRPAP Trigger: GGGAGCCGGTCGCCATCCCCATCGGGCGGCAGCGGA...TGGGAAGGACAGCCAGAGTCCCCGCTCCGCGCCGTCGTCGCAGGGCCGCGGGGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| 3UTR CAA 72 bp | GGCTTTGTACGCCGGCGTCCCCTGCGGCGGGGCGCGTaGGCCGAGGACCGCGATCGTCTCCTCCTCCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GFVRRRPLRRGA*AEDRDRLLLRR Trigger: GCGACGGAGGAGGAGACGATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTACAAAGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | CCCGGGGCGCCGCCACCGGAGTCGCTGCTGGAGTGTGCCCCGCTGAGCGAGCGCGACGAGGCGCCGGGCTaGGGGAAGCCATTAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGAPPPESLLECAPLSERDEAPG*GKPLAA Trigger: TGCTGCTAATGGCTTCCCGCAGCCCGGCGCCTCGTC...GCGCTCGCTCAGCGGGGCACACTCCAGCAGCGACTCCGGTGGCGGCGCCCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | ATGAGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGCTCCCGCTGGATCGCTaGCTGCCTGTCTTCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MSCCPLGRPVGRACQAMALPLDR*LPVFRP Trigger: CGGGCGGAAGACAGGCAGCCAGCGATCCAGCGGGAG...CGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | CGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGCGACCCCCATCCGCTaGCGCCCGATGGGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPQPRRASHGLRCPCPCQATPIR*RPMGMA Trigger: CGCCATCCCCATCGGGCGGCAGCGGATGGGGGTCGC...TTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | GGCGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCGCGACCGGCTCCCGCTaGATCGCTGGCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLSLGVPRTAFAVLVPAATGSR*IAGCLS Trigger: AGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGC...GGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR CCA 90 bp | CGGGCACTGGTGATGCGTCTCGGCTCCATGAAACTGGGCGAGTCCCGGCGCCGCGCCGCCCGATGGGGATaGCGACCGGCTCCCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RALVMRLGSMKLGESRRRAARWG*RPAPAG Trigger: TCCAGCGGGAGCCGGTCGCCATCCCCATCGGGCGGC...GCGGCGCCGGGACTCGCCCAGTTTCATGGAGCCGAGACGCATCACCAGTGCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | GCGAGCGGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTGCGCGATGAGCCTGCCTCCGTTCTGCTaGGGCGACCCCCATCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGWSSRSPDGDPGCAMSLPPFC*GDPHPL Trigger: CAGCGGATGGGGGTCGCCCCAGCAGAACGGAGGCAG...GCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR TCA 90 bp | GGCTTTGTACGCCGGCGTCCCCTGCGGCGGGGCGCGTTGGCCGAGGACCGCGATGCAACTCCATGCACTTaGGCTCCACGCGCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFVRRRPLRRGALAEDRDATPCT*APRAAC Trigger: GCAAGCGGCGCGTGGAGCTCAAGTGCATGGAGTTGC...ATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTACAAAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | GGCGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCCTCCGCTTCGCTGCCTaGTGCCTCCGTTCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLSLGVPRTAFAVLVPALRFAA*CLRSAG Trigger: CCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCGGAG...GGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGAGGTGCTATGCTGGACCAGTGCTTaGTCCTGTACCCCCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSGPPRRPRVPGDGEVLCWTSA*SCTPGA Trigger: GGCACCGGGGGTACAGGACCAAGCACTGGTCCAGCA...TAGCACCTCGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR CCA 90 bp | GCGAGCGGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTGCGCGATGAGCAGGGGCTGTGGGAGCTaGCGCTGCTGTGGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASGWSSRSPDGDPGCAMSRGCGS*RCCGGG Trigger: TCCACCACCACAGCAGCGCCAGCTCCCACAGCCCCT...GCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGAGGTGCTAGACATTGAGGGGCTGTaGGAGCTGGCGCTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSGPPRRPRVPGDGEVLDIEGL*ELALLW Trigger: CCACAGCAGCGCCAGCTCCCACAGCCCCTCAATGTC...TAGCACCTCGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR CCA 90 bp | GTACGCCGGCGTCCCCTGCGGCGGGGCGCGTTGGCCGAGGACCGCGATCGTCTCGCGATGCAGAGCTGCTaGACCAGTGCTTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRRRPLRRGALAEDRDRLAMQSC*TSAWSC Trigger: ACAGGACCAAGCACTGGTCCAGCAGCTCTGCATCGC...GAGACGATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR TCA 90 bp | CCCGGGGCGCCGCCACCGGAGTCGCTGCTGGAGTGTGCCCCGCTGAGCGAGCGCTTGCGGCTCCTCCGATaGCTGCCTTTCTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAPPPESLLECAPLSERLRLLR*LPFFFF Trigger: GAAGAAAAAGAAAGGCAGTCATCGGAGGAGCCGCAA...GCGCTCGCTCAGCGGGGCACACTCCAGCAGCGACTCCGGTGGCGGCGCCCCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR GCA 90 bp | ATGAGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGTTCTCCATCAGCATCTaGCGGAAGGTCCCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSCCPLGRPVGRACQAMAFSISI*RKVPTF Trigger: GAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAA...CGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | CGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGTCCTCATCGAAGGGTaGGTACTCCAGGCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPQPRRASHGLRCPCPCQVLIEG*VLQARL Trigger: GAGCCGGGCCTGGAGTACCCACCCTTCGATGAGGAC...TTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR TCA 90 bp | GCGAGCGGCTGGAGCTCCAGGAGCCCTGATGGGGACCCGGGCTGCGCGATGAGCCCTGGAGACTCAGTGTaGGGCCTCTTTCGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGWSSRSPDGDPGCAMSPGDSV*GLFRSL Trigger: CAAAGAGCGAAAGAGGCCTCACACTGAGTCTCCAGG...GCTCATCGCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTCCAGCCGCTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR TCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGAGCTCCAGGAGCCCTaGTGGGGACCCGGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIELQEP*WGPGLR Trigger: GCGCAGCCCGGGTCCCCATCAGGGCTCCTGGAGCTC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGCCAAGAGGTTTCTTGGGCGACGGTGAGAGGCTGGGGCTGCGGGTCCTTCGCTTCGCTGCCTGCTaGCTCCGTTCTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRGFLGDGERLGLRVLRFAAC*LRSAGA Trigger: CGCCCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCG...AAGGACCCGCAGCCCCAGCCTCTCACCGTCGCCCAAGAAACCTCTTGGCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | TCCCTGCCAAGAGGTTTCTTGGGCGACGGTGAGAGGCTGGGGCTGCGGGTCCTTGTCTCTGCCACGATGTaGGCCCCAGGCCGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRGFLGDGERLGLRVLVSATM*APGRSS Trigger: GGAGGACCGGCCTGGGGCCCACATCGTGGCAGAGAC...AAGGACCCGCAGCCCCAGCCTCTCACCGTCGCCCAAGAAACCTCTTGGCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR TCA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTTGGAGTGTGCCCCGCTaGGCGAGCGCGACGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPWSVPR*ASATSP Trigger: GGGGCTCGTCGCGCTCGCTCAGCGGGGCACACTCCA...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | GAGGTTTCTTGGGCGACGGTGAGAGGCTGGGGCTGCGGGTCCTTTTGTCTGGGGTCCAGGATCTCCCGGTaGGCGCGCTTCACCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVSWATVRGWGCGSFCLGSRISR*ARFTKP Trigger: CGGCTTGGTGAAGCGCGCGCACCGGGAGATCCTGGA...CCCCAGACAAAAGGACCCGCAGCCCCAGCCTCTCACCGTCGCCCAAGAAACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | GGCTTTGTACGCCGGCGTCCCCTGCGGCGGGGCGCGTTGGCCGAGGACCGCGATAAGCACTCCCACAGCTaGATTCTGACTCTAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFVRRRPLRRGALAEDRDKHSHS*ILTLVS Trigger: GGAGACTAGAGTCAGAATGCAGCTGTGGGAGTGCTT...ATCGCGGTCCTCGGCCAACGCGCCCCGCCGCAGGGGACGCCGGCGTACAAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTGCGACCCCCATCCGCTaGCGCCCGATGGGGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPATPIR*RPMGMA Trigger: CGCCATCCCCATCGGGCGGCAGCGGATGGGGGTCGC...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTTTATCGGGCGGGCTGTaGGCCGAGCCGGGGCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPLSGGL*AEPGRP Trigger: GGGTCGCCCCGGCTCGGCGCACAGCCCGCCCGATAA...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCTGTTGCCCTCTGGGCCGCCCCGTCGGCCGCGCGTGCCAGGCGATGGCGTTTTCTTCTTCTTCTTaGGAGGGGGCGATGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSCCPLGRPVGRACQAMAFSSSS*EGAMQS Trigger: GCTCTGCATCGCCCCCTCCCAAGAAGAAGAAGAAAA...CGCCATCGCCTGGCACGCGCGGCCGACGGGGCGGCCCAGAGGGCAACAGCTCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR GCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCGCTTCGCTGCCTGCTaGCTCCGTTCTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIRFAAC*LRSAGA Trigger: CGCCCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCG...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGCGACCGGCTCCCGCTaGATCGCTGGCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIATGSR*IAGCLS Trigger: AGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR TCA 90 bp | ACACAGGCAATGGGCCCCAGGCTGGTAAGCTGGCCTCAAGCAGAAGAGGGGTGTTGCGTCTCGGCTCCATaGAACTGGGCGAGTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAMGPRLVSWPQAEEGCCVSAP*NWASPG Trigger: GCCGGGACTCGCCCAGTTTCATGGAGCCGAGACGCA...ACACCCCTCTTCTGCTTGAGGCCAGCTTACCAGCCTGGGGCCCATTGCCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | CGTCTCGGCTCCATGAAACTGGGCGAGTCCCGGCGCCGCTTTCGGATGGGCGAGTCCTCTGAGTACCCCTaGTCCTCCATCATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGSMKLGESRRRFRMGESSEYP*SSIISC Trigger: GCAGGAGATGATGGAGGAGCAGGGGTACTCAGAGGA...CTCGCCCATCCGAAAGCGGCGCCGGGACTCGCCCAGTTTCATGGAGCCGAGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | ACACAGGCAATGGGCCCCAGGCTGGTAAGCTGGCCTCAAGCAGAAGAGGGGTGTAGCGCGAGTGGGATTTaGAGGGCGAGCGGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAMGPRLVSWPQAEEGCSASGI*RASGWS Trigger: GCTCCAGCCGCTCGCCCTCCAAATCCCACTCGCGCT...ACACCCCTCTTCTGCTTGAGGCCAGCTTACCAGCCTGGGGCCCATTGCCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR TCA 90 bp | ACACAGGCAATGGGCCCCAGGCTGGTAAGCTGGCCTCAAGCAGAAGAGGGGTGTGCAACTCCATGCACTTaGGCTCCACGCGCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAMGPRLVSWPQAEEGCATPCT*APRAAC Trigger: GCAAGCGGCGCGTGGAGCTCAAGTGCATGGAGTTGC...ACACCCCTCTTCTGCTTGAGGCCAGCTTACCAGCCTGGGGCCCATTGCCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | GGCGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCGGCTCCTCCGATGACTaGCTTTCTTTTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLSLGVPRTAFAVLVPAGSSDD*LSFSSS Trigger: AGAAGAAGAAAAAGAAAGGCAGTCATCGGAGGAGCC...GGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGACATTGAGGGGCTGTaGGAGCTGGCGCTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIDIEGL*ELALLW Trigger: CCACAGCAGCGCCAGCTCCCACAGCCCCTCAATGTC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGCGACGGTGAGAGGCTaGGGCTGCGGGTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIATVRG*GCGSFC Trigger: ACAAAAGGACCCGCAGCCCCAGCCTCTCACCGTCGC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTTCCCGTGTCCGCCGTaGCCTCGCTCGGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTFPCPP*PRSEQG Trigger: GCCCTGCTCCGAGCGAGGTCACGGCGGACACGGGAA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGGATGGGCGAGTAGCTaGGGGAGCGACGCCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALGWASS*GSDAGC Trigger: GCACCCGGCGTCGCTCCCGCAGCTACTCGCCCATCC...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTGCGGAGCGGGGACTCTaGCTGTCCTTCCCACGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTAERGL*LSFPRA Trigger: CGCGCGTGGGAAGGACAGCCAGAGTCCCCGCTCCGC...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTTGCGCGATGAGCTGTTaGCCTCTGGGCCGCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALCAMSC*PLGRPV Trigger: GACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCA...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGTCTCTGCCACGATGTaGGCCCCAGGCCGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALVSATM*APGRSS Trigger: GGAGGACCGGCCTGGGGCCCACATCGTGGCAGAGAC...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTCTCCCGCTGGATCGCTaGCTGCCTGTCTTCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTLPLDR*LPVFRP Trigger: CGGGCGGAAGACAGGCAGCCAGCGATCCAGCGGGAG...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTCTGCCTCCGTTCTGCTaGGGCGACCCCCATCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTLPPFC*GDPHPL Trigger: CAGCGGATGGGGGTCGCCCCAGCAGAACGGAGGCAG...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGGCGCCGCTTTCGGATaGGCGAGTAGCTGCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALGAAFG*ASSCGS Trigger: GCTCCCGCAGCTACTCGCCCATCCGAAAGCGGCGCC...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTGACGAGGCGCCGGGCTaGGGGAAGCCATTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTDEAPG*GKPLAA Trigger: TGCTGCTAATGGCTTCCCGCAGCCCGGCGCCTCGTC...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTTCCAGGATCTCCCGGTaGGCGCGCTTCACCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALSRISR*ARFTKP Trigger: CGGCTTGGTGAAGCGCGCGCACCGGGAGATCCTGGA...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | CCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGAGGTTTCTTCCTCCATCATCTCCTaGAACTCCATGCACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRRASHGLRCPCPCQEVSSSIIS*NSMHLS Trigger: GCTCAAGTGCATGGAGTTGCAGGAGATGATGGAGGA...AGAAACCTCTTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTCTCCGCTTCGCTGCCTaGTGCCTCCGTTCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTLRFAA*CLRSAG Trigger: CCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCGGAG...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGGCTTGAGTAGTCGGTaGTCAAGCAGCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIGLSSR*SSSWRK Trigger: CTTCCTCCAGCTGCTTGAGCACCGACTACTCAAGCC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTGCGATGCAGAGCTGCTaGACCAGTGCTTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPAMQSC*TSAWSC Trigger: ACAGGACCAAGCACTGGTCCAGCAGCTCTGCATCGC...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTAGGGGCTGTGGGAGCTaGCGCTGCTGTGGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTRGCGS*RCCGGG Trigger: TCCACCACCACAGCAGCGCCAGCTCCCACAGCCCCT...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGCCGCCCGATGGGGATaGCGACCGGCTCCCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YYSPNVFPHCGERGKGKLAARWG*RPAPAG Trigger: TCCAGCGGGAGCCGGTCGCCATCCCCATCGGGCGGC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGTCCGCTGCCGCCCGATaGGGATGGCGACCGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YYSPNVFPHCGERGKGKLSAAAR*GWRPAP Trigger: GGGAGCCGGTCGCCATCCCCATCGGGCGGCAGCGGA...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTTGGAGGGCGAGCGGCTaGAGCTCCAGGAGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALWRASG*SSRSPD Trigger: ATCAGGGCTCCTGGAGCTCCAGCCGCTCGCCCTCCA...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTCTGGGGAGCGCGAGTaGGATTTGGAGGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTSGERE*DLEGER Trigger: CCGCTCGCCCTCCAAATCCCACTCGCGCTCCCCAGA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| 3UTR CAA 72 bp | AGCTCAGGTGAGGTGACAGCCAACTCTTGTGGACTCTaGTGCCATACACAGGCAATGGGCCCCAGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGEVTANSCGL*CHTQAMGPRLV Trigger: TACCAGCCTGGGGCCCATTGCCTGTGTATGGCACAAGAGTCCACAAGAGTTGGCTGTCACCTCACCTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTCGCTGTCCTTGTCCCTaGCAAGAGGTTTCTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IIWPITQTAACTCLPVALRCPCP*QEVSWA Trigger: CGCCCAAGAAACCTCTTGGCAGGGACAAGGACAGCG...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTCCCGTGACTGCGGCTaGTGTAGCTTCCATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTSRDCG*CSFHGC Trigger: ACAGCCATGGAAGCTACAGCAGCCGCAGTCACGGGA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTTTTTCTTCTTCTTCTTaGGAGGGGGCGATGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPFSSSS*EGAMQS Trigger: GCTCTGCATCGCCCCCTCCCAAGAAGAAGAAGAAAA...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTTCTCCATCAGCATCTaGCGGAAGGTCCCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTFSISI*RKVPTF Trigger: GAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCGGCTCCTCCGATGACTaGCTTTCTTTTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQSPGHLPYWAKEDFEIGSSDD*LSFSSS Trigger: AGAAGAAGAAAAAGAAAGGCAGTCATCGGAGGAGCC...GATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGGTCCTCATCGAAGGGTaGGTACTCCAGGCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYSPNVFPHCGERGKGKLVLIEG*VLQARL Trigger: GAGCCGGGCCTGGAGTACCCACCCTTCGATGAGGAC...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTGACCTGTTTGGTCATCTGACTTTGCGGCTCCTCCGATaGCTGCCTTTCTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAACTCLPVALDLFGHLTLRLLR*LPFFFF Trigger: GAAGAAAAAGAAAGGCAGTCATCGGAGGAGCCGCAA...AGTCAGATGACCAAACAGGTCAAGGGCTACTGGGAGACAGGTACAGGCTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS-3UTR GCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGTCCTCTGAGTACCCCTaGTCCTCCATCATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YYSPNVFPHCGERGKGKLSSEYP*SSIISC Trigger: GCAGGAGATGATGGAGGAGCAGGGGTACTCAGAGGA...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| 3UTR CAA 72 bp | GAGAGAGATGGGCCGAGTGTGAACTTCTCATTCTGCTaGTCATTACCCCAGGAGTTAGGTGGTCCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERDGPSVNFSFC*SLPQELGGPSF Trigger: GAAGGAAGGACCACCTAACTCCTGGGGTAATGACAAGCAGAATGAGAAGTTCACACTCGGCCCATCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR GCA 90 bp | TATTACAGTCCAAATGTTTTCCCGCACTGCGGAGAAAGAGGGAAGGGGAAACTGAAGCACTCCCACAGCTaGATTCTGACTCTAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YYSPNVFPHCGERGKGKLKHSHS*ILTLVS Trigger: GGAGACTAGAGTCAGAATGCAGCTGTGGGAGTGCTT...CAGTTTCCCCTTCCCTCTTTCTCCGCAGTGCGGGAAAACATTTGGACTGTAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS CCA 90 bp | GCTGCCTCCGTTCTGCTGGGGCGACCCCCATCCGCTGCCGCCCGATaGGGATGGCGACCGGCTCCCGCTGGATCGCTGGCTGCCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AASVLLGRPPSAAAR*GWRPAPAGSLAACL Trigger: AAGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGCCATCCCCATCGGGCGGCAGCGGATGGGGGTCGCCCCAGCAGAACGGAGGCAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS GCA 90 bp | AGCTCCTCCTCCGCGCGCGGCCAAGACCCGGACGAGGCGCCGGGCTaGGGGAAGCCATTAGCAGCATCCGGTGGAGCTGGCATGCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSARGQDPDEAPG*GKPLAASGGAGMPV Trigger: TACCGGCATGCCAGCTCCACCGGATGCTGCTAATGGCTTCCCGCAGCCCGGCGCCTCGTCCGGGTCTTGGCCGCGCGCGGAGGAGGAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
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| CDS GCA 90 bp | TCCTGGAGGCGCTGCAGGAGCGGCTGCGAGTCCCGTGACTGCGGCTaGTGTAGCTTCCATGGCTGTGGCCAGGGCTGGGGCTCCGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWRRCRSGCESRDCG*CSFHGCGQGWGSGC Trigger: ACAGCCGGAGCCCCAGCCCTGGCCACAGCCATGGAAGCTACAGCAGCCGCAGTCACGGGACTCGCAGCCGCTCCTGCAGCGCCTCCAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS CCA 90 bp | CCGCTGCCGCCCGATGGGGATGGCGACCGGCTCCCGCTGGATCGCTaGCTGCCTGTCTTCCGCCCGTCATCTCGATGCTTGGGGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPPDGDGDRLPLDR*LPVFRPSSRCLGLS Trigger: ACTGAGCCCCAAGCATCGAGATGACGGGCGGAAGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGCCATCCCCATCGGGCGGCAGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS GCA 90 bp | TGCCGCCCGATGGGGATGGCGACCGGCTCCCGCTGGATCGCTGGCTaGCTGTCTTCCGCCCGTCATCTCGATGCTTGGGGCTCAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRPMGMATGSRWIAG*LSSARHLDAWGSVC Trigger: GCAGACTGAGCCCCAAGCATCGAGATGACGGGCGGAAGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGCCATCCCCATCGGGCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS CCA 90 bp | GACCGGGCAGTCGCAATCCACCGGGCCGTCGTCCTCATCGAAGGGTaGGTACTCCAGGCCCGGCTCCAAGCCCTCCATTCGTCGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DRAVAIHRAVVLIEG*VLQARLQALHSSRG Trigger: ACCCCGCGACGAATGGAGGGCTTGGAGCCGGGCCTGGAGTACCCACCCTTCGATGAGGACGACGGCCCGGTGGATTGCGACTGCCCGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | GGCGGCCTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCTGCAACTCCATGCACTaGAGCTCCACGCGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLSLGVPRTAFAVLVPACNSMH*SSTRRL Trigger: CAAGCGGCGCGTGGAGCTCAAGTGCATGGAGTTGCA...GGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAGGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS CCA 90 bp | CCCGGACGAGGCGCCGGGCTGCGGGAAGCCATTAGCAGCATCCGGTaGAGCTGGCATGCCGGTAGCCCCGTTGTTCACGGTGGAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PGRGAGLREAISSIR*SWHAGSPVVHGGGH Trigger: ATGTCCTCCACCGTGAACAACGGGGCTACCGGCATGCCAGCTCCACCGGATGCTGCTAATGGCTTCCCGCAGCCCGGCGCCTCGTCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
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| CDS GCA 90 bp | GGCCGGTCCTCCCGGGTCAGTACGCCTTCCTTCTCCATCAGCATCTaGCGGAAGGTCCCGACCTTCTGCCGGATCTCCTCCTCTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GRSSRVSTPSFSISI*RKVPTFCRISSSEY Trigger: GTACTCAGAGGAGGAGATCCGGCAGAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAAGGAAGGCGTACTGACCCGGGAGGACCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTGAGCGCGAGTGGGATTaGGAGGGCGAGCGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPEREWD*EGERLE Trigger: CTCCAGCCGCTCGCCCTCCAAATCCCACTCGCGCTC...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | ATCATTTGGCCCATAACCCAGACAGCAGCCTGTACCTGTCTCCCAGTAGCCCTTCTGCGCGATGAGCTGTaGCCCTCTGGGCCGCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IIWPITQTAACTCLPVALLRDEL*PSGPPR Trigger: ACGGGGCGGCCCAGAGGGCAACAGCTCATCGCGCAG...AAGGGCTACTGGGAGACAGGTACAGGCTGCTGTCTGGGTTATGGGCCAAATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | ACACAGGCAATGGGCCCCAGGCTGGTAAGCTGGCCTCAAGCAGAAGAGGGGTGTCGGCCTTCGCTGTCCTaGTCCCTGCCAAGAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQAMGPRLVSWPQAEEGCRPSLS*SLPRGF Trigger: GAAACCTCTTGGCAGGGACAAGGACAGCGAAGGCCG...ACACCCCTCTTCTGCTTGAGGCCAGCTTACCAGCCTGGGGCCCATTGCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS GCA 90 bp | ACGCCTTCCTTCTCCATCAGCATCTGCCGGAAGGTCCCGACCTTCTaGCGGATCTCCTCCTCTGAGTACCCCTGCTCCTCCATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSFSISICRKVPTF*RISSSEYPCSSIIS Trigger: GGAGATGATGGAGGAGCAGGGGTACTCAGAGGAGGAGATCCGGCAGAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAAGGAAGGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTTGCAACTCCATGCACTaGAGCTCCACGCGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPCNSMH*SSTRRL Trigger: CAAGCGGCGCGTGGAGCTCAAGTGCATGGAGTTGCA...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS CCA 90 bp | ATCCAGAATCACTGTAGTGTGAGGACATTGAGGGGCTGTGGGAGCTaGCGCTGCTGTGGTGGTGGAACCTTCGGCCTGGAGACTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IQNHCSVRTLRGCGS*RCCGGGTFGLETQC Trigger: ACACTGAGTCTCCAGGCCGAAGGTTCCACCACCACAGCAGCGCCAGCTCCCACAGCCCCTCAATGTCCTCACACTACAGTGATTCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCTCGGCGTGCCTCGCACGGCCTTCGCTGTCCTTGTCCCTGCCAAGAGGTCTTTTCGTTTGCTCTaGAGGCTTCTCGATCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLGVPRTAFAVLVPAKRSFRLL*RLLDLY Trigger: ATACAGATCGAGAAGCCTCAAGAGCAAACGAAAAGA...CCTCTTGGCAGGGACAAGGACAGCGAAGGCCGTGCGAGGCACGCCGAGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013615.14 |
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| CDS-3UTR CAA 90 bp | CACCAGAGCCCAGGGCATCTGCCCTATTGGGCCAAGGAAGACTTCGAGATCCCTTCTTTTCGTTTGCTCTaGAGGCTTCTCGATCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HQSPGHLPYWAKEDFEIPSFRLL*RLLDLY Trigger: ATACAGATCGAGAAGCCTCAAGAGCAAACGAAAAGA...AGGGATCTCGAAGTCTTCCTTGGCCCAATAGGGCAGATGCCCTGGGCTCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
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| CDS GCA 72 bp | TCGGGCGGGCTGTGCGCCGAGCCGGGGCGACCCCCGTaGGCTCCGCTTCGCTGCCTGCTGCCTCCGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGGLCAEPGRPP*APLRCLLPPFC Trigger: GCAGAACGGAGGCAGCAGGCAGCGAAGCGGAGCGCACGGGGGTCGCCCCGGCTCGGCGCACAGCCCGCCCGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS GCA 72 bp | CCGTGCGCTCCGCTTCGCTGCCTGCTGCCTCCGTTCTaGTGGGGCGACCCCCATCCGCTGCCGCCCGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCAPLRCLLPPF*WGDPHPLPPDG Trigger: CCCATCGGGCGGCAGCGGATGGGGGTCGCCCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCGGAGCGCACGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
||
| CDS GCA 72 bp | TCCGCGCGCGGCCAAGACCCGGACGAGGCGCCGGGCTaGGGGAAGCCATTAGCAGCATCCGGTGGAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SARGQDPDEAPG*GKPLAASGGAG Trigger: GCCAGCTCCACCGGATGCTGCTAATGGCTTCCCGCAGCCCGGCGCCTCGTCCGGGTCTTGGCCGCGCGCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
||
| CDS GCA 72 bp | GCCCGGCTCCAAGCCCTCCATTCGTCGCGGGGTCTCTaGCACGATGTGGGCCCCAGGCCGGTCCTCCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARLQALHSSRGL*HDVGPRPVLPG Trigger: ACCCGGGAGGACCGGCCTGGGGCCCACATCGTGGCAGAGACCCCGCGACGAATGGAGGGCTTGGAGCCGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS CCA 72 bp | TGCGCTCCGCTTCGCTGCCTGCTGCCTCCGTTCTGCTaGGGCGACCCCCATCCGCTGCCGCCCGATGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CAPLRCLLPPFC*GDPHPLPPDGD Trigger: ATCCCCATCGGGCGGCAGCGGATGGGGGTCGCCCCAGCAGAACGGAGGCAGCAGGCAGCGAAGCGGAGCGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
||
| CDS GCA 72 bp | TGGAGGCGCTGCAGGAGCGGCTGCGAGTCCCGTGACTaGGGCTGCTGTAGCTTCCATGGCTGTGGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRRCRSGCESRD*GCCSFHGCGQG Trigger: GCCCTGGCCACAGCCATGGAAGCTACAGCAGCCGCAGTCACGGGACTCGCAGCCGCTCCTGCAGCGCCTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144211.2 |
||
| CDS GCA 72 bp | ATGGGGATGGCGACCGGCTCCCGCTGGATCGCTGGCTaGCTGTCTTCCGCCCGTCATCTCGATGCTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MGMATGSRWIAG*LSSARHLDAWG Trigger: GCCCCAAGCATCGAGATGACGGGCGGAAGACAGGCAGCCAGCGATCCAGCGGGAGCCGGTCGCCATCCCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
||
| CDS CCA 72 bp | GGCGCCGGGCTGCGGGAAGCCATTAGCAGCATCCGGTaGAGCTGGCATGCCGGTAGCCCCGTTGTTCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: GAGLREAISSIR*SWHAGSPVVHG Trigger: ACCGTGAACAACGGGGCTACCGGCATGCCAGCTCCACCGGATGCTGCTAATGGCTTCCCGCAGCCCGGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
||
| CDS CCA 72 bp | GGGCTGCGGGAAGCCATTAGCAGCATCCGGTGGAGCTaGCATGCCGGTAGCCCCGTTGTTCACGGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLREAISSIRWS*HAGSPVVHGGG Trigger: TCCTCCACCGTGAACAACGGGGCTACCGGCATGCCAGCTCCACCGGATGCTGCTAATGGCTTCCCGCAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
||
| CDS CCA 72 bp | TCTTCTTCTTCTTGGGAGGGGGCGATGCAGAGCTGCTaGACCAGTGCTTGGTCCTGTACCCCCGGTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSWEGAMQSC*TSAWSCTPGAR Trigger: GCGGGCACCGGGGGTACAGGACCAAGCACTGGTCCAGCAGCTCTGCATCGCCCCCTCCCAAGAAGAAGAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
||
| CDS GCA 72 bp | TCCCGGGTCAGTACGCCTTCCTTCTCCATCAGCATCTaGCGGAAGGTCCCGACCTTCTGCCGGATCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRVSTPSFSISI*RKVPTFCRISS Trigger: GGAGGAGATCCGGCAGAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAAGGAAGGCGTACTGACCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
||
| CDS CCA 72 bp | CACTGTAGTGTGAGGACATTGAGGGGCTGTGGGAGCTaGCGCTGCTGTGGTGGTGGAACCTTCGGCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HCSVRTLRGCGS*RCCGGGTFGLE Trigger: CTCCAGGCCGAAGGTTCCACCACCACAGCAGCGCCAGCTCCCACAGCCCCTCAATGTCCTCACACTACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS GCA 72 bp | TTCTCCATCAGCATCTGCCGGAAGGTCCCGACCTTCTaGCGGATCTCCTCCTCTGAGTACCCCTGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSISICRKVPTF*RISSSEYPCSS Trigger: GGAGGAGCAGGGGTACTCAGAGGAGGAGATCCGGCAGAAGGTCGGGACCTTCCGGCAGATGCTGATGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013615.14 ENSMUST00000126232.8 ENSMUST00000144211.2 |
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| CDS CAA 90 bp | GGCTCAGTCTGCTGGGTGATCCAGAATCACTGTAGTGTGAGGACATaGAGGGGCTGTGGGAGCTGGCGCTGCTGTGGTGGTGGAACCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSVCWVIQNHCSVRT*RGCGSWRCCGGGTF Trigger: GAAGGTTCCACCACCACAGCAGCGCCAGCTCCCACAGCCCCTCAATGTCCTCACACTACAGTGATTCTGGATCACCCAGCAGACTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS CCA 72 bp | TCCTCCGATGACTGCCTTTCTTTTTCTTCTTCTTCTTaGGAGGGGGCGATGCAGAGCTGCTGGACCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSDDCLSFSSSS*EGAMQSCWTSA Trigger: AGCACTGGTCCAGCAGCTCTGCATCGCCCCCTCCCAAGAAGAAGAAGAAAAAGAAAGGCAGTCATCGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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| CDS TCA 72 bp | TCTGACTCTAGTCTCCTCTTTTTGCGGCTCCTCCGATaGCTGCCTTTCTTTTTCTTCTTCTTCTTGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SDSSLLFLRLLR*LPFFFFFFLGG Trigger: CCCTCCCAAGAAGAAGAAGAAAAAGAAAGGCAGTCATCGGAGGAGCCGCAAAAAGAGGAGACTAGAGTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013615.14 ENSMUST00000144211.2 |
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