Pregenerated sensors for SRRM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028809Ensembl transcript IDs: ENSMUST00000030613.11, ENSMUST00000084846.12, ENSMUST00000105861.8, ENSMUST00000131301.2, ENSMUST00000131373.8, ENSMUST00000136342.9, ENSMUST00000136409.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTaGAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGA | + |
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Preference number: 1 (lower is better) Translates to: PDPNQLRLRCPTGQP*SSRAGILPHSRLHR Trigger: TCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR CCA 90 bp | TTTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTaGAGGAGAAACCCAGATCCAAATCAGCTTAGGCTGCGCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FTQRRKGRRKQNNPT*RRNPDPNQLRLRCP Trigger: GGGACAGCGCAGCCTAAGCTGATTTGGATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR TCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCCCACAGACAAAAGAGTaGACACTCACTCGTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: RCPTGQPCSSRAGILPHSPQTKE*TLTRSF Trigger: GAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGG...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCCTAGGGCTGGGATCCTaGCACACAGCAGACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: TEKKRAKETKQPYLEEKPLGLGS*HTADST Trigger: TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAG...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCCCACAGACAAAAGAGTaGACACTCACTCGTTCATTC | + |
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Preference number: 2 (lower is better) Translates to: TEKKRAKETKQPYLEEKPPQTKE*TLTRSF Trigger: GAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGG...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACTCATTCAAACTTTTGTaGTACTTCAACAGTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNSFKLL*YFNSGL Trigger: GAGACCACTGTTGAAGTACCACAAAAGTTTGAATGA...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR GCA 72 bp | AATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTaGAGCTCTAGGGCTGGGATCCTGCCACACAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: NQLRLRCPTGQP*SSRAGILPHSR Trigger: TCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAAAACAAAACAACCTCTaGGGAGAGGTAAGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: QGSPAALGLGSCHTADSTKQNNL*GEVRAF Trigger: AAATGCCCTTACCTCTCCCAAGAGGTTGTTTTGTTT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR CCA 72 bp | GCCAAATACACGAGCTCTTCAGTTGTGGGTACCAATTaGATGAGTAAGGAGAAACATGACGGGAGCCACCGG | + |
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Preference number: 3 (lower is better) Translates to: AKYTSSSVVGTN*MSKEKHDGSHR Trigger: CCGGTGGCTCCCGTCATGTTTCTCCTTACTCATCCAATTGGTACCCACAACTGAAGAGCTCGTGTATTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR TCA 72 bp | GATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTaGACACTCACTCGTTCATTCAAACTTTTGTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: DPATQQTPQTKE*TLTRSFKLLWY Trigger: GTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| 3UTR-3UTR CAA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAAAACAAAACAACCTCTaGGGAGAGGTAAGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: LHREEKGEGNKTTLPGGEKQNNL*GEVRAF Trigger: AAATGCCCTTACCTCTCCCAAGAGGTTGTTTTGTTT...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCGGGCCGCTCATCTTCTaGGGTGGAAGAGGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSGPLIF*GGRGAR Trigger: TCTGGCTCCTCTTCCACCTCAGAAGATGAGCGGCCC...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACACCTTCGTCGTGGTGGTaGGGTGGGAGATCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTPSSWW*GGRSAP Trigger: CGGCGCAGATCTCCCACCCCACCACCACGACGAAGG...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGGGGTCCTTCGTCGTaGTGGTGGGGTGGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSRGPSS*WWGGRS Trigger: AGATCTCCCACCCCACCACCACGACGAAGGACCCCT...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTTCTTCTTGGAGACGGTaGGCGGCGGCGTGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSSSWRR*AAAWGR Trigger: CCTCCCCCACGCCGCCGCTCACCGTCTCCAAGAAGA...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACGGTCCTTCGTCGTGGTaGTGGGGTGGGAGATCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TGQPCSSRAGILPHSRLHGPSSW*WGGRSA Trigger: CGCAGATCTCCCACCCCACCACCACGACGAAGGACC...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAACCCTTCTTACGGACTaGGGGCTTGGTGAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTTLLTD*GLGEAA Trigger: GGCTGCCTCACCAAGCCCTCAGTCCGTAAGAAGGGT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACACTTCCTGGGCTCTGGTaGTGCTGCAGGCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTLPGLW*CCRLFL Trigger: CAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAG...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCTCGTCGTCTTGGGCTTaGCCGCCTTCTAGGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSSSSWA*PPSRRV Trigger: TACTCTCCTAGAAGGCGGCCAAGCCCAAGACGACGA...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAAGGGGTCCTTCGTCGTaGTGGTGGGGTGGGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTRGPSS*WWGGRS Trigger: AGATCTCCCACCCCACCACCACGACGAAGGACCCCT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCGTGCTGATGTGGTGGTaGCAGCAGAAACAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSVLMWW*QQKQLQ Trigger: CTGCAGCTGTTTCTGCTGCCACCACCACATCAGCAC...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCCCTGTGCTGATGTGGTaGTGGCAGCAGAAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSPVLMW*WQQKQL Trigger: CAGCTGTTTCTGCTGCCACCACCACATCAGCACAGG...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCCTGGGCTCTGGTGCTaGTGCAGGCTCTTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: IQISLGCAVPQGSPAALGPGLWC*CRLFLC Trigger: GCACAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGG...CCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCCTGGGCTCTGGTGCTaGTGCAGGCTCTTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: TQIQISLGCAVPQGSPAAPGLWC*CRLFLC Trigger: GCACAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGG...AGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAAGGGCTCCGGCTCTTaGTTCTGTGACGGGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: TGQPCSSRAGILPHSRLHKGSGS*FCDGEI Trigger: GATCTCCCCGTCACAGAACCAAGAGCCGGAGCCCTT...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTGAGACCTTCGCCTTCTaGCAGGAGGGGGAGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSETFAF*QEGERD Trigger: GTCCCTCTCCCCCTCCTGCCAGAAGGCGAAGGTCTC...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTGGTCCTTCGTCGTGGTaGTGGGGTGGGAGATCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSGPSSW*WGGRSA Trigger: CGCAGATCTCCCACCCCACCACCACGACGAAGGACC...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACATCTCAGTCTCCTTCCTaGGCTCTGGTGCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTSQSPS*ALVLLQ Trigger: CTGCAGCAGCACCAGAGCCCAGGAAGGAGACTGAGA...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACTCTCAGTCTCCTTCCTaGGCTCTGGTGCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TGQPCSSRAGILPHSRLHSQSPS*ALVLLQ Trigger: CTGCAGCAGCACCAGAGCCCAGGAAGGAGACTGAGA...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACATTTGTGGAGGGTGACTaGGACTGCACAGGAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTFVEGD*DCTGEG Trigger: TCCCTCTCCTGTGCAGTCTCAGTCACCCTCCACAAA...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACACTGAACCGATTATCCTaGTCCGCACTTGTTCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTLNRLS*SALVPR Trigger: CCGCGGAACAAGTGCGGAGCAGGATAATCGGTTCAG...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTTCCTGGGCTCTGGTaGTGCTGCAGGCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQISLGCAVPQGSPAALGLPGLW*CCRLFL Trigger: CAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAG...CCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCGACAGATCTGGAAGATaGAACCCTTCTTACGGACTG | + |
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Preference number: 4 (lower is better) Translates to: RCPTGQPCSSRAGILPHSDRSGR*NPSYGL Trigger: CAGTCCGTAAGAAGGGTTTCATCTTCCAGATCTGTC...GCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGGGATTTGCGTCTTCTTaGGCTGCGAGACCGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IQISLGCAVPQGSPAALGGFASS*AARPLP Trigger: AGGGAGCGGTCTCGCAGCCCAAGAAGACGCAAATCC...CCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTCGGTTCTTTGGGCTCTaGTACAGGCTCAGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSRFFGL*YRLRLG Trigger: CCCAAGCCTGAGCCTGTACCAGAGCCCAAAGAACCG...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGGACAGGCTTGGTGTTaGGCTCTTAGCCTTTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTGQAWC*ALSLFG Trigger: GCCAAAAAGGCTAAGAGCCCAACACCAAGCCTGTCC...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGGGTGGCCTCCTGTACTaGGGAGTCCTTCATCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKGGLLY*GVLHPH Trigger: GTGAGGATGAAGGACTCCTCAGTACAGGAGGCCACC...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACTGGTGGTGGAGATGGTaGTGCCCTTCGCTTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ALGLGSCHTADSTDKRVNWWWRW*CPSLGR Trigger: CCGCCCAAGCGAAGGGCATCACCATCTCCACCACCA...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | ACCCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCCAGTTTGTGGAGGGTaGCTGAGACTGCACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TQIQISLGCAVPQGSPAAPVCGG*LRLHRR Trigger: TCTCCTGTGCAGTCTCAGTCACCCTCCACAAACTGG...AGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAAAGGAGATCTGGATTTaGGTCTTCTTGGGCTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTKEIWI*VFLGCE Trigger: CTCGCAGCCCAAGAAGACGCAAATCCAGATCTCCTT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGCACAGGAGAGGGAGGTaGTGGCGGCTTTTTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKHRRGR*WRLFSC Trigger: GCAGCTAAAAAGCCGCCAGCACCTCCCTCTCCTGTG...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGCCAGTTTGTGGAGGGTaGCTGAGACTGCACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKPVCGG*LRLHRR Trigger: TCTCCTGTGCAGTCTCAGTCACCCTCCACAAACTGG...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGCTGAACCGATTATCCTaGTCCGCACTTGTTCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKLNRLS*SALVPR Trigger: CCGCGGAACAAGTGCGGAGCAGGATAATCGGTTCAG...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACCAGCTGCAGCCATTTTaGTGCCTTTGTCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQPCSSRAGILPHSRLHQLQPF*CLCLLQ Trigger: CTGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTG...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACATATTGTCTTCTCTGCTaGACAGAATCAGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTYCLLC*TESAAA Trigger: GGCTGCAGCTGATTCTGTGCAGCAGAGAAGACAATA...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGCCTGTGCTGATGTGGTaGTGGCAGCAGAAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKPVLMW*WQQKQL Trigger: CAGCTGTTTCTGCTGCCACCACCACATCAGCACAGG...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTCTTCCTGTGCTGATGTaGTGGTGGCAGCAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSLPVLM*WWQQKQ Trigger: CTGTTTCTGCTGCCACCACCACATCAGCACAGGAAG...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGTTAGTCACTGGTGACTaGCATCGCTTTCCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQISLGCAVPQGSPAALGLVTGD*HRFPIC Trigger: GCAGATGGGAAAGCGATGGCAGTCACCAGTGACTAA...CCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084846.12 |
||
| CDS-3UTR CCA 90 bp | ACCCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTGTACAGGCTCAGGCTTaGGAGCTTTCAAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQIQISLGCAVPQGSPAAVQAQA*ELSRCH Trigger: GTGACATCTTGAAAGCTCCCAAGCCTGAGCCTGTAC...AGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACTTAGGAGGTGGAGAGTaGGAGACCCGGCGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGLGSCHTADSTDKRVNLGGGE*ETRRFG Trigger: ACCAAAGCGCCGGGTCTCCCACTCTCCACCTCCTAA...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGCTTCCTGTGCTGATGTaGTGGTGGCAGCAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PCSSRAGILPHSRLHRQKLPVLM*WWQQKQ Trigger: CTGTTTCTGCTGCCACCACCACATCAGCACAGGAAG...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTAGGGACTTTTAGTCACTGGTaGCTGCCATCGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQISLGCAVPQGSPAALGTFSHW*LPSLSH Trigger: ATGGGAAAGCGATGGCAGTCACCAGTGACTAAAAGT...CCCTAGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084846.12 |
||
| CDS-3UTR TCA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTGACAGATCTGGAAGATaGAACCCTTCTTACGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSDRSGR*NPSYGL Trigger: CAGTCCGTAAGAAGGGTTTCATCTTCCAGATCTGTC...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR GCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCCCTGGGCTCTGGTGCTaGTGCAGGCTCTTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPPGLWC*CRLFLC Trigger: GCACAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGG...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCGGTCCTTCGTCGTGGTaGTGGGGTGGGAGATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPGPSSW*WGGRSA Trigger: CGCAGATCTCCCACCCCACCACCACGACGAAGGACC...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCACCCTTCTTACGGACTaGGGGCTTGGTGAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPTLLTD*GLGEAA Trigger: GGCTGCCTCACCAAGCCCTCAGTCCGTAAGAAGGGT...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCCTTCCTGGGCTCTGGTaGTGCTGCAGGCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPLPGLW*CCRLFL Trigger: CAGGAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAG...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCGAGACCTTCGCCTTCTaGCAGGAGGGGGAGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETETFAF*QEGERD Trigger: GTCCCTCTCCCCCTCCTGCCAGAAGGCGAAGGTCTC...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAATCCAGAGACAGATCTaGAAGATGAAACCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGSPAALGLGSCHTADSTIQRQI*KMKPFL Trigger: TAAGAAGGGTTTCATCTTCCAGATCTGTCTCTGGAT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACGTACAGGCTCAGGCTTaGGAGCTTTCAAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGLGSCHTADSTDKRVNVQAQA*ELSRCH Trigger: GTGACATCTTGAAAGCTCCCAAGCCTGAGCCTGTAC...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCAGATGGTCGTCGTCTTaGGCTTGGCCGCCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPRWSSS*AWPPSR Trigger: CCTAGAAGGCGGCCAAGCCCAAGACGACGACCATCT...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGCCTCCTTCGTCTCCCTaGAGACCTACTCCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MWLSGSIHCPIYIQQKALPPSSP*RPTPPV Trigger: CACCGGAGGAGTAGGTCTCCAGGGAGACGAAGGAGG...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCCCTCCTTCGTCTCCCTaGAGACCTACTCCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKKRAKETKQPYLEEKPPPSSP*RPTPPV Trigger: CACCGGAGGAGTAGGTCTCCAGGGAGACGAAGGAGG...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACCCTTCGTCGTGGTGGTaGGGTGGGAGATCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHPSSWW*GGRSAP Trigger: CGGCGCAGATCTCCCACCCCACCACCACGACGAAGG...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
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| CDS-3UTR CCA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAACCTTCGTCGTGGTGGTaGGGTGGGAGATCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHREEKGEGNKTTLPGGEPSSWW*GGRSAP Trigger: CGGCGCAGATCTCCCACCCCACCACCACGACGAAGG...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGAGGGGTCCTTCGTCGTaGTGGTGGGGTGGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MWLSGSIHCPIYIQQKALRGPSS*WWGGRS Trigger: AGATCTCCCACCCCACCACCACGACGAAGGACCCCT...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGGGGCTGCAGTAGCTaGGGTGGCTATGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEKKRAKETKQPYLEEKPRGCSS*GGYGHS Trigger: GCTGTGACCATAGCCACCCCAGCTACTGCAGCCCCT...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCCTCCTTCCTGGGCTCTaGTGCTGCTGCAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEKKRAKETKQPYLEEKPLLPGL*CCCRLF Trigger: GAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAGGAG...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR TCA 90 bp | GCCATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGTCTTCTTGGAGACGGTaGGCGGCGGCGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AICTLDSGRSPRNIKILQSSWRR*AAAWGR Trigger: CCTCCCCCACGCCGCCGCTCACCGTCTCCAAGAAGA...CTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAATGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
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| CDS-3UTR TCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTTTGTGGAGGGTGACTaGGACTGCACAGGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPFVEGD*DCTGEG Trigger: TCCCTCTCCTGTGCAGTCTCAGTCACCCTCCACAAA...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCCCAGTTTGTGGAGGGTaGCTGAGACTGCACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPPVCGG*LRLHRR Trigger: TCTCCTGTGCAGTCTCAGTCACCCTCCACAAACTGG...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCACAGGAGAGGGAGGTaGTGGCGGCTTTTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETHRRGR*WRLFSC Trigger: GCAGCTAAAAAGCCGCCAGCACCTCCCTCTCCTGTG...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR GCA 90 bp | GAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGATCAACAGCTGCAGGGGCTaGAGTAGCTGGGGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EEKGEGNKTTLPGGETQINSCRG*SSWGGY Trigger: ATAGCCACCCCAGCTACTGCAGCCCCTGCAGCTGTT...GATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
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| CDS-3UTR CCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCGGATTTGCGTCTTCTTaGGCTGCGAGACCGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETGFASS*AARPLP Trigger: AGGGAGCGGTCTCGCAGCCCAAGAAGACGCAAATCC...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGAAGGGCTCCGGCTCTTaGTTCTGTGACGGGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MWLSGSIHCPIYIQQKALKGSGS*FCDGEI Trigger: GATCTCCCCGTCACAGAACCAAGAGCCGGAGCCCTT...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCGGTTCTTTGGGCTCTaGTACAGGCTCAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETRFFGL*YRLRLG Trigger: CCCAAGCCTGAGCCTGTACCAGAGCCCAAAGAACCG...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACGAGACCTTCGCCTTCTaGCAGGAGGGGGAGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHETFAF*QEGERD Trigger: GTCCCTCTCCCCCTCCTGCCAGAAGGCGAAGGTCTC...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
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| CDS-3UTR CCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCTTAGGAGGTGGAGAGTaGGAGACCCGGCGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETLGGGE*ETRRFG Trigger: ACCAAAGCGCCGGGTCTCCCACTCTCCACCTCCTAA...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTCTTTGTTTAGGAGGTaGAGAGTGGGAGACCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPSLFRR*RVGDPA Trigger: CGCCGGGTCTCCCACTCTCCACCTCCTAAACAAAGA...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAGGGCCGCTCATCTTCTaGGGTGGAAGAGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHREEKGEGNKTTLPGGEGPLIF*GGRGAR Trigger: TCTGGCTCCTCTTCCACCTCAGAAGATGAGCGGCCC...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCTTTGTGGAGGGTGACTaGGACTGCACAGGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETFVEGD*DCTGEG Trigger: TCCCTCTCCTGTGCAGTCTCAGTCACCCTCCACAAA...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCCTTCATCCTCACGGATaGCTCTGGGAGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEKKRAKETKQPYLEEKPLHPHG*LWELWR Trigger: TCTCCAGAGCTCCCAGAGCCATCCGTGAGGATGAAG...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAACCTCCTTCGTCTCCCTaGAGACCTACTCCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHREEKGEGNKTTLPGGEPPSSP*RPTPPV Trigger: CACCGGAGGAGTAGGTCTCCAGGGAGACGAAGGAGG...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCTCTTTGTTTAGGAGGTaGAGAGTGGGAGACCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEKKRAKETKQPYLEEKPSLFRR*RVGDPA Trigger: CGCCGGGTCTCCCACTCTCCACCTCCTAAACAAAGA...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCTCTTTGTTTAGGAGGTaGAGAGTGGGAGACCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HREEKGEGNKTTLPGGETSLFRR*RVGDPA Trigger: CGCCGGGTCTCCCACTCTCCACCTCCTAAACAAAGA...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACAGGGGCTGCAGTAGCTaGGGTGGCTATGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHRGCSS*GGYGHS Trigger: GCTGTGACCATAGCCACCCCAGCTACTGCAGCCCCT...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | GCCATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGTGGTGGTGGAGATGGTaGTGCCCTTCGCTTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AICTLDSGRSPRNIKILQWWWRW*CPSLGR Trigger: CCGCCCAAGCGAAGGGCATCACCATCTCCACCACCA...CTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTTGGTGGTGGAGATGGTaGTGCCCTTCGCTTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTWWWRW*CPSLGR Trigger: CCGCCCAAGCGAAGGGCATCACCATCTCCACCACCA...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR GCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCAAGGAGATCTGGATTTaGGTCTTCTTGGGCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPKEIWI*VFLGCE Trigger: CTCGCAGCCCAAGAAGACGCAAATCCAGATCTCCTT...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAAACAGCTGCAGGGGCTaGAGTAGCTGGGGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHREEKGEGNKTTLPGGENSCRG*SSWGGY Trigger: ATAGCCACCCCAGCTACTGCAGCCCCTGCAGCTGTT...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCTTCATCCTCACGGATaGCTCTGGGAGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNLHPHG*LWELWR Trigger: TCTCCAGAGCTCCCAGAGCCATCCGTGAGGATGAAG...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACTTAGGAGGTGGAGAGTaGGAGACCCGGCGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHLGGGE*ETRRFG Trigger: ACCAAAGCGCCGGGTCTCCCACTCTCCACCTCCTAA...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCACTTTTAGTCACTGGTaGCTGCCATCGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPTFSHW*LPSLSH Trigger: ATGGGAAAGCGATGGCAGTCACCAGTGACTAAAAGT...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR TCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTACCCTTCTTACGGACTaGGGGCTTGGTGAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTTLLTD*GLGEAA Trigger: GGCTGCCTCACCAAGCCCTCAGTCCGTAAGAAGGGT...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTGGATTTGCGTCTTCTTaGGCTGCGAGACCGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHIGFASS*AARPLP Trigger: AGGGAGCGGTCTCGCAGCCCAAGAAGACGCAAATCC...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACTCGTCGTCTTGGGCTTaGCCGCCTTCTAGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHSSSWA*PPSRRV Trigger: TACTCTCCTAGAAGGCGGCCAAGCCCAAGACGACGA...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGATCACCGGAGGTTCTTCCTaGAGACACAGAAACACGACT | + |
|
Preference number: 4 (lower is better) Translates to: EEKGEGNKTTLPGGETQITGGSS*RHRNTT Trigger: AGTCGTGTTTCTGTGTCTCCAGGAAGAACCTCCGGT...GATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTAGGGGCTGCAGTAGCTaGGGTGGCTATGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTRGCSS*GGYGHS Trigger: GCTGTGACCATAGCCACCCCAGCTACTGCAGCCCCT...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTTACCTTCCTGGGCTCTaGTGCTGCTGCAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHIYLPGL*CCCRLF Trigger: GAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAGGTA...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTCTCCTTCCTGGGCTCTaGTGCTGCTGCAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTLLPGL*CCCRLF Trigger: GAAGAGCCTGCAGCAGCACCAGAGCCCAGGAAGGAG...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR GCA 90 bp | GCCATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGCACAGGAGAGGGAGGTaGTGGCGGCTTTTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AICTLDSGRSPRNIKILQHRRGR*WRLFSC Trigger: GCAGCTAAAAAGCCGCCAGCACCTCCCTCTCCTGTG...CTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTCTTCATCCTCACGGATaGCTCTGGGAGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHILHPHG*LWELWR Trigger: TCTCCAGAGCTCCCAGAGCCATCCGTGAGGATGAAG...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTAGATGGTCGTCGTCTTaGGCTTGGCCGCCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTRWSSS*AWPPSR Trigger: CCTAGAAGGCGGCCAAGCCCAAGACGACGACCATCT...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACACCGGAGGTTCTTCCTaGAGACACAGAAACACGACT | + |
|
Preference number: 4 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNTGGSS*RHRNTT Trigger: AGTCGTGTTTCTGTGTCTCCAGGAAGAACCTCCGGT...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAGGGCCGCTCATCTTCTaGGGTGGAAGAGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRGPLIF*GGRGAR Trigger: TCTGGCTCCTCTTCCACCTCAGAAGATGAGCGGCCC...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | GCCATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGCTGAACCGATTATCCTaGTCCGCACTTGTTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AICTLDSGRSPRNIKILQLNRLS*SALVPR Trigger: CCGCGGAACAAGTGCGGAGCAGGATAATCGGTTCAG...CTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCAGCTGCAGCCATTTTaGTGCCTTTGTCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNQLQPF*CLCLLQ Trigger: CTGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTG...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTGTGCTGATGTGGTGGTaGCAGCAGAAACAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTVLMWW*QQKQLQ Trigger: CTGCAGCTGTTTCTGCTGCCACCACCACATCAGCAC...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTAGGAACCTTGGGGGTTTaGAATCGCCAAGTCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HHFGIWVNATDAQLSTKLGTLGV*NRQVPC Trigger: ACAGGGGACTTGGCGATTCCAAACCCCCAAGGTTCC...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAGGTGGCCTCCTGTACTaGGGAGTCCTTCATCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRGGLLY*GVLHPH Trigger: GTGAGGATGAAGGACTCCTCAGTACAGGAGGCCACC...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACCAGCTGCAGCCATTTTaGTGCCTTTGTCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TAKGPVLSLERSCKKLKHQLQPF*CLCLLQ Trigger: CTGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTG...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTTTAGTCACTGGTGACTaGCATCGCTTTCCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHILVTGD*HRFPIC Trigger: GCAGATGGGAAAGCGATGGCAGTCACCAGTGACTAA...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAAACAGCTGCAGGGGCTaGAGTAGCTGGGGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRNSCRG*SSWGGY Trigger: ATAGCCACCCCAGCTACTGCAGCCCCTGCAGCTGTT...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTGTACAGGCTCAGGCTTaGGAGCTTTCAAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHIVQAQA*ELSRCH Trigger: GTGACATCTTGAAAGCTCCCAAGCCTGAGCCTGTAC...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGACGGTTCTTTGGGCTCTaGTACAGGCTCAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRRFFGL*YRLRLG Trigger: CCCAAGCCTGAGCCTGTACCAGAGCCCAAAGAACCG...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCATCCAGAGACAGATCTaGAAGATGAAACCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPIQRQI*KMKPFL Trigger: TAAGAAGGGTTTCATCTTCCAGATCTGTCTCTGGAT...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGACAAAAGAGTGAACACTCACTCGTTCATTCAAACTTTTGTGGTACTGGACAGGCTTGGTGTTaGGCTCTTAGCCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRQKSEHSLVHSNFCGTGQAWC*ALSLFG Trigger: GCCAAAAAGGCTAAGAGCCCAACACCAAGCCTGTCC...AGTACCACAAAAGTTTGAATGAACGAGTGAGTGTTCACTCTTTTGTCTGTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTGACAGATCTGGAAGATaGAACCCTTCTTACGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: AKGPVLSLERSCKKLKHIDRSGR*NPSYGL Trigger: CAGTCCGTAAGAAGGGTTTCATCTTCCAGATCTGTC...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR GCA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTACTTCCGACTCCCTACTaGAACTCAACCACCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHFGIWVNATDAQLSTKLLPTPY*NSTTLS Trigger: ACTCAAGGTGGTTGAGTTGCAGTAGGGAGTCGGAAG...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAGTGCTGATGTGGTGGTaGCAGCAGAAACAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRVLMWW*QQKQLQ Trigger: CTGCAGCTGTTTCTGCTGCCACCACCACATCAGCAC...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGACCTGTGCTGATGTGGTaGTGGCAGCAGAAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRPVLMW*WQQKQL Trigger: CAGCTGTTTCTGCTGCCACCACCACATCAGCACAGG...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTAGTCTTCTTGGAACCTTaGGGGTTTGGAATCGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHFGIWVNATDAQLSTKLVFLEP*GFGIAK Trigger: CTTGGCGATTCCAAACCCCCAAGGTTCCAAGAAGAC...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAGGACAGGCTTGGTGTTaGGCTCTTAGCCTTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRGQAWC*ALSLFG Trigger: GCCAAAAAGGCTAAGAGCCCAACACCAAGCCTGTCC...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGACTTCCTGTGCTGATGTaGTGGTGGCAGCAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRLPVLM*WWQQKQ Trigger: CTGTTTCTGCTGCCACCACCACATCAGCACAGGAAG...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTAAGAAAGATGTTCCCTTaGCTTGCTTCCGACTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: HHFGIWVNATDAQLSTKLRKMFP*LASDSL Trigger: TAGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTCT...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAACCGGAGGTTCTTCCTaGAGACACAGAAACACGACT | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRTGGSS*RHRNTT Trigger: AGTCGTGTTTCTGTGTCTCCAGGAAGAACCTCCGGT...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CCA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAATCCAGAGACAGATCTaGAAGATGAAACCCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHREEKGEGNKTTLPGGEIQRQI*KMKPFL Trigger: TAAGAAGGGTTTCATCTTCCAGATCTGTCTCTGGAT...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTATCTTCAGTGTCTTCTTaGAACCTTGGGGGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHFGIWVNATDAQLSTKLSSVSS*NLGGLE Trigger: TTCCAAACCCCCAAGGTTCCAAGAAGACACTGAAGA...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGATATTGTCTTCTCTGCTaGACAGAATCAGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICTLDSGRSPRNIKILQRYCLLC*TESAAA Trigger: GGCTGCAGCTGATTCTGTGCAGCAGAGAAGACAATA...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACTGGATTTGCGTCTTCTaGGGCTGCGAGACCGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGQPCSSRAGILPHSRLHWICVF*GCETAP Trigger: GGGAGCGGTCTCGCAGCCCAAGAAGACGCAAATCCA...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACCTTCCCACCTCCTTCTaGATCAGAATTCCGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGQPCSSRAGILPHSRLHLPTSF*IRIPGR Trigger: CCTGCCCGGAATTCTGATCAAGAAGGAGGTGGGAAG...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTGAGATGGTCGTCGTCTaGGGCTTGGCCGCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSEMVVV*GLAAFL Trigger: CAAGAAGGCGGCCAAGCCCAAGACGACGACCATCTC...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084846.12 |
||
| CDS-3UTR CAA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTTCTGGAGACGGTTCTTaGGGCTCTGGTACAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSSGDGS*GSGTGS Trigger: TGAGCCTGTACCAGAGCCCAAAGAACCGTCTCCAGA...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTGGGCTCTTAGCCTTTTaGGCTGGTACTGCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSGLLAF*AGTAGD Trigger: GTCACCTGCAGTACCAGCCAAAAAGGCTAAGAGCCC...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTTCCCACCTCCTTCTaGATCAGAATTCCGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQIQISLGCAVPQGSPAALPTSF*IRIPGR Trigger: CCTGCCCGGAATTCTGATCAAGAAGGAGGTGGGAAG...AGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACGCCATTTTGCTGCCTTaGTCTTCTTCAGACTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGQPCSSRAGILPHSRLHAILLP*SSSDSD Trigger: GTCTGAGTCTGAAGAAGACAAAGGCAGCAAAATGGC...GTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACGAGGGCGAGCGTCTCTaGGTGACTGTGGGGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALGLGSCHTADSTDKRVNEGERL*VTVGLL Trigger: AAGAAGCCCCACAGTCACCAAGAGACGCTCGCCCTC...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGGAAGGAGATCTGGATTaGCGTCTTCTTGGGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PCSSRAGILPHSRLHRQKEGDLD*RLLGLR Trigger: TCGCAGCCCAAGAAGACGCAAATCCAGATCTCCTTC...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGGTTCTGCCGTCGGTATaGTCTTCTCTGCTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PCSSRAGILPHSRLHRQKVLPSV*SSLLHR Trigger: TCTGTGCAGCAGAGAAGACAATACCGACGGCAGAAC...CTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACGGGCTCTTAGCCTTTTaGGCTGGTACTGCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALGLGSCHTADSTDKRVNGLLAF*AGTAGD Trigger: GTCACCTGCAGTACCAGCCAAAAAGGCTAAGAGCCC...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGGATTTGCGTCTTCTaGGGCTGCGAGACCGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPWICVF*GCETAP Trigger: GGGAGCGGTCTCGCAGCCCAAGAAGACGCAAATCCA...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | GCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAGACAAAAGAGTGAACGTTCTGCCGTCGGTATaGTCTTCTCTGCTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALGLGSCHTADSTDKRVNVLPSV*SSLLHR Trigger: TCTGTGCAGCAGAGAAGACAATACCGACGGCAGAAC...GTTCACTCTTTTGTCTGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS TCA 90 bp | GGCCGCCTTCTTGATCGGGATCTATGTCTCCGTCTTGGTCTAGTATaGGAAGGTGATCGAGATCGGGTCCGAGACCGAGATTTGGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLLDRDLCLRLGLV*EGDRDRVRDRDLDR Trigger: ACGATCCAAATCTCGGTCTCGGACCCGATCTCGATCACCTTCTCATACTAGACCAAGACGGAGACATAGATCCCGATCAAGAAGGCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084846.12 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGCCCTGCAGCTCTAGGGCTGGGATCCTGCCACACAGCAGACTCCACAAGACGCCAATTTTTCTaGTTCAATTTGTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGSPAALGLGSCHTADSTRRQFF*FNLSLL Trigger: AAGCAGAGACAAATTGAACAAGAAAAATTGGCGTCT...TGTGGAGTCTGCTGTGTGGCAGGATCCCAGCCCTAGAGCTGCAGGGCTGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCTTTTGGGTGGCGGAGTaGCTGGAGATGACGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEKKRAKETKQPYLEEKPFWVAE*LEMTAG Trigger: ACCGGCCGTCATCTCCAGCAACTCCGCCACCCAAAA...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATCCAAATCAGCTTAGGCTGCGCTGTCCCACAGGGCAGCCCTGCAGCTCTCAGTACCTTTATGTTTaGTCACTTTACCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PDPNQLRLRCPTGQPCSSQYLYV*SLYRRF Trigger: GAACCTCCGGTAAAGTGACAAAACATAAAGGTACTG...AGAGCTGCAGGGCTGCCCTGTGGGACAGCGCAGCCTAAGCTGATTTGGATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCGAGGGCGAGCGTCTCTaGGTGACTGTGGGGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TEKKRAKETKQPYLEEKPEGERL*VTVGLL Trigger: AAGAAGCCCCACAGTCACCAAGAGACGCTCGCCCTC...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS GCA 90 bp | GGAGAGGGACTTCTCCTCCTTCTACTACTTTTAGTCACTGGTGACTaGCATCGCTTTCCCATCTGCATCCGAGGGGAAGTCTCTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEGLLLLLLLLVTGD*HRFPICIRGEVSFW Trigger: CCAGAAAGAGACTTCCCCTCGGATGCAGATGGGAAAGCGATGGCAGTCACCAGTGACTAAAAGTAGTAGAAGGAGGAGAAGTCCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030613.11 ENSMUST00000084846.12 ENSMUST00000136342.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACTTTTGGGTGGCGGAGTaGCTGGAGATGACGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNFWVAE*LEMTAG Trigger: ACCGGCCGTCATCTCCAGCAACTCCGCCACCCAAAA...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCGGGCTCTTAGCCTTTTaGGCTGGTACTGCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPGLLAF*AGTAGD Trigger: GTCACCTGCAGTACCAGCCAAAAAGGCTAAGAGCCC...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGATCTCTGGAGACGGTTCTTaGGGCTCTGGTACAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EEKGEGNKTTLPGGETQISGDGS*GSGTGS Trigger: TGAGCCTGTACCAGAGCCCAAAGAACCGTCTCCAGA...GATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACTTTTGGGTGGCGGAGTaGCTGGAGATGACGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAKGPVLSLERSCKKLKHFWVAE*LEMTAG Trigger: ACCGGCCGTCATCTCCAGCAACTCCGCCACCCAAAA...GTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGCTTCCCACCTCCTTCTaGATCAGAATTCCGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MWLSGSIHCPIYIQQKALLPTSF*IRIPGR Trigger: CCTGCCCGGAATTCTGATCAAGAAGGAGGTGGGAAG...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGGAAGGAGATCTGGATTaGCGTCTTCTTGGGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: MWLSGSIHCPIYIQQKALEGDLD*RLLGLR Trigger: TCGCAGCCCAAGAAGACGCAAATCCAGATCTCCTTC...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | GCAAAAGGCCCTGTGCTGTCCCTTGAACGTAGTTGTAAAAAGTTGAAACACATTGAGGGCGAGCGTCTCTaGGTGACTGTGGGGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKGPVLSLERSCKKLKHIEGERL*VTVGLL Trigger: AAGAAGCCCCACAGTCACCAAGAGACGCTCGCCCTC...AATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACGAAGGAGATCTGGATTaGCGTCTTCTTGGGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TQRRKGRRKQNNPTWRRNEGDLD*RLLGLR Trigger: TCGCAGCCCAAGAAGACGCAAATCCAGATCTCCTTC...GTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTCAGCTGCAGCCATTTaGCTGCCTTTGTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCGSVVAYIAQSTYSKRPSAAAI*LPLSSS Trigger: TGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTGA...GGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCTCAGTGGTAGCATACATTGCCCAATCTACATACAGCAAAAGGCCCTGGCCATTTTGCTGCCTTaGTCTTCTTCAGACTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MWLSGSIHCPIYIQQKALAILLP*SSSDSD Trigger: GTCTGAGTCTGAAGAAGACAAAGGCAGCAAAATGGC...CAGGGCCTTTTGCTGTATGTAGATTGGGCAATGTATGCTACCACTGAGCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCGCCATTTTGCTGCCTTaGTCTTCTTCAGACTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TEKKRAKETKQPYLEEKPAILLP*SSSDSD Trigger: GTCTGAGTCTGAAGAAGACAAAGGCAGCAAAATGGC...GGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGATCTCAGCTGCAGCCATTTaGCTGCCTTTGTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EEKGEGNKTTLPGGETQISAAAI*LPLSSS Trigger: TGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTGA...GATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCTCAGCTGCAGCCATTTaGCTGCCTTTGTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HREEKGEGNKTTLPGGETSAAAI*LPLSSS Trigger: TGAAGAAGACAAAGGCAGCAAAATGGCTGCAGCTGA...GGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTATGGAACCTTGGGGGTTaGGAATCGCCAAGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HHFGIWVNATDAQLSTKLWNLGG*ESPSPL Trigger: CAGGGGACTTGGCGATTCCAAACCCCCAAGGTTCCA...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAACCCAGATCCAGTACCTTTATGTTTaGTCACTTTACCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEKGEGNKTTLPGGETQIQYLYV*SLYRRF Trigger: GAACCTCCGGTAAAGTGACAAAACATAAAGGTACTG...GATCTGGGTTTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | GCCATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGGTTCTGCCGTCGGTATaGTCTTCTCTGCTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AICTLDSGRSPRNIKILQVLPSV*SSLLHR Trigger: TCTGTGCAGCAGAGAAGACAATACCGACGGCAGAAC...CTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTAGAGAAAGATGTTCCCTaGGCTTGCTTCCGACTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHFGIWVNATDAQLSTKLEKDVP*ACFRLP Trigger: AGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTCTC...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CAA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGATCTGGAGACGGTTCTTaGGGCTCTGGTACAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ICTLDSGRSPRNIKILQRSGDGS*GSGTGS Trigger: TGAGCCTGTACCAGAGCCCAAAGAACCGTCTCCAGA...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTATGTCTTCTTGGAACCTaGGGGGTTTGGAATCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HHFGIWVNATDAQLSTKLCLLGT*GVWNRQ Trigger: TTGGCGATTCCAAACCCCCAAGGTTCCAAGAAGACA...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CAA 90 bp | CATCATTTTGGAATCTGGGTTAATGCCACAGATGCTCAACTGTCCACAAAACTAGTCTTCAGTGTCTTCTaGGAACCTTGGGGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHFGIWVNATDAQLSTKLVFSVF*EPWGFG Trigger: TCCAAACCCCCAAGGTTCCAAGAAGACACTGAAGAC...TAGTTTTGTGGACAGTTGAGCATCTGTGGCATTAACCCAGATTCCAAAATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS GCA 90 bp | CCCTGTAGAGAAAGATGTTCCCTTGGCTTGCTTCCGACTCCCTACTaGAACTCAACCACCTTGAGTTTAATGTTATATCATTTATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCRERCSLGLLPTPY*NSTTLSLMLYHLSS Trigger: TGAAGATAAATGATATAACATTAAACTCAAGGTGGTTGAGTTGCAGTAGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTCTCTACAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS-3UTR CAA 90 bp | TTACACAGAGAAGAAAAGGGCGAAGGAAACAAAACAACCCTACCTGGAGGAGAAAGACGCCAATTTTTCTaGTTCAATTTGTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHREEKGEGNKTTLPGGERRQFF*FNLSLL Trigger: AAGCAGAGACAAATTGAACAAGAAAAATTGGCGTCT...TTCTCCTCCAGGTAGGGTTGTTTTGTTTCCTTCGCCCTTTTCTTCTCTGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084846.12 ENSMUST00000105861.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGACAGTACCTTTATGTTTaGTCACTTTACCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICTLDSGRSPRNIKILQRQYLYV*SLYRRF Trigger: GAACCTCCGGTAAAGTGACAAAACATAAAGGTACTG...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS-3UTR CAA 90 bp | ATTTGTACTCTTGATTCTGGCAGGTCACCAAGAAACATCAAAATACTACAGAGAAGACGCCAATTTTTCTaGTTCAATTTGTCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ICTLDSGRSPRNIKILQRRRQFF*FNLSLL Trigger: AAGCAGAGACAAATTGAACAAGAAAAATTGGCGTCT...TCTCTGTAGTATTTTGATGTTTCTTGGTGACCTGCCAGAATCAAGAGTACAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030613.11 |
||
| CDS CAA 72 bp | CTGGGGCAGGGGAAGGGCTCCGGCTCTTGGTTCTTCTaGGGCTGCGAGACCGCTCCCTCTTCTCTCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGQGKGSGSWFF*GCETAPSSLCC Trigger: GCAGCAGAGAGAAGAGGGAGCGGTCTCGCAGCCCAAGAAGAACCAAGAGCCGGAGCCCTTCCCCTGCCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131373.8 |
||
| CDS CAA 72 bp | CTGGAGATGACGGCCGGTGTCTTCGCCGTGGAGGACTaGCTGAAGGTGATAACCTACGCGTTTTCCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LEMTAGVFAVED*LKVITYAFSEE Trigger: CTCCTCGGAAAACGCGTAGGTTATCACCTTCAGCAAGTCCTCCACGGCGAAGACACCGGCCGTCATCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030613.11 ENSMUST00000084846.12 ENSMUST00000105861.8 ENSMUST00000131301.2 ENSMUST00000136342.9 |
||
| CDS CAA 90 bp | CCAGACAGGGATGCGGAAGAACGCCTCCTTCTGCAGAATTCACCTTaGGCAGAAGAATTCCTGAGAACCGTCTCCCTGGAGACCTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: PDRDAEERLLLQNSP*AEEFLRTVSLETYS Trigger: GGAGTAGGTCTCCAGGGAGACGGTTCTCAGGAATTCTTCTGCCAAAGGTGAATTCTGCAGAAGGAGGCGTTCTTCCGCATCCCTGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131301.2 |
||
| CDS CAA 72 bp | CGCCAAGTCCCCTGTAGAGAAAGATGTTCCCTTGGCTaGCTTCCGACTCCCTACTGCAACTCAACCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RQVPCRERCSLG*LPTPYCNSTTL Trigger: CAAGGTGGTTGAGTTGCAGTAGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTCTCTACAGGGGACTTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
||
| CDS TCA 72 bp | TTTCAAGATGTCACTTGTAGAGGTGGCCTCCTGTACTaGGGAGTCCTTCATCCTCACGGATGGCTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FQDVTCRGGLLY*GVLHPHGWLWE Trigger: CTCCCAGAGCCATCCGTGAGGATGAAGGACTCCTCAGTACAGGAGGCCACCTCTACAAGTGACATCTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030613.11 ENSMUST00000084846.12 ENSMUST00000105861.8 ENSMUST00000131301.2 ENSMUST00000136342.9 |
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| CDS TCA 72 bp | GGGACTTCTCCTCCTTCTACTACTTTTAGTCACTGGTaGCTGCCATCGCTTTCCCATCTGCATCCGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GTSPPSTTFSHW*LPSLSHLHPRG Trigger: TCCCCTCGGATGCAGATGGGAAAGCGATGGCAGTCACCAGTGACTAAAAGTAGTAGAAGGAGGAGAAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030613.11 ENSMUST00000084846.12 ENSMUST00000136342.9 |
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| CDS TCA 72 bp | TCCTTCTGCAGAATTCACCTTTGGCAGAAGAATTCCTaGGAACCGTCTCCCTGGAGACCTACTCCTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SFCRIHLWQKNS*EPSPWRPTPPV Trigger: CACCGGAGGAGTAGGTCTCCAGGGAGACGGTTCTCAGGAATTCTTCTGCCAAAGGTGAATTCTGCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131301.2 |
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| CDS CAA 72 bp | GATGCGGAAGAACGCCTCCTTCTGCAGAATTCACCTTaGGCAGAAGAATTCCTGAGAACCGTCTCCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DAEERLLLQNSP*AEEFLRTVSLE Trigger: CTCCAGGGAGACGGTTCTCAGGAATTCTTCTGCCAAAGGTGAATTCTGCAGAAGGAGGCGTTCTTCCGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131301.2 |
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| CDS TCA 72 bp | CTTGATCGGGATCTATGTCTCCGTCTTGGTCTAGTATaGGAAGGTGATCGAGATCGGGTCCGAGACCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LDRDLCLRLGLV*EGDRDRVRDRD Trigger: ATCTCGGTCTCGGACCCGATCTCGATCACCTTCTCATACTAGACCAAGACGGAGACATAGATCCCGATCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030613.11 ENSMUST00000084846.12 ENSMUST00000105861.8 ENSMUST00000131301.2 ENSMUST00000136342.9 |
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| CDS CCA 72 bp | AGGTGTCTTCAGTGTCTTCTTGGAACCTTGGGGGTTTaGAATCGCCAAGTCCCCTGTAGAGAAAGATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCLQCLLGTLGV*NRQVPCRERCS Trigger: GGAACATCTTTCTCTACAGGGGACTTGGCGATTCCAAACCCCCAAGGTTCCAAGAAGACACTGAAGACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
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| CDS CAA 72 bp | AAGCAAGTACAGATTCCAGGTGTCTTCAGTGTCTTCTaGGAACCTTGGGGGTTTGGAATCGCCAAGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: KQVQIPGVFSVF*EPWGFGIAKSP Trigger: AGGGGACTTGGCGATTCCAAACCCCCAAGGTTCCAAGAAGACACTGAAGACACCTGGAATCTGTACTTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
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| CDS CAA 90 bp | GTTTGGAATCGCCAAGTCCCCTGTAGAGAAAGATGTTCCCTTGGCTaGCTTCCGACTCCCTACTGCAACTCAACCACCTTGAGTTTAATG | + |
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Preference number: 6 (lower is better) Translates to: VWNRQVPCRERCSLG*LPTPYCNSTTLSLM Trigger: CATTAAACTCAAGGTGGTTGAGTTGCAGTAGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTCTCTACAGGGGACTTGGCGATTCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
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| CDS CAA 90 bp | AATAGCACAAAGCAAGTACAGATTCCAGGTGTCTTCAGTGTCTTCTaGGAACCTTGGGGGTTTGGAATCGCCAAGTCCCCTGTAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NSTKQVQIPGVFSVF*EPWGFGIAKSPVEK Trigger: TTTCTCTACAGGGGACTTGGCGATTCCAAACCCCCAAGGTTCCAAGAAGACACTGAAGACACCTGGAATCTGTACTTGCTTTGTGCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
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| CDS GCA 72 bp | GAAAGATGTTCCCTTGGCTTGCTTCCGACTCCCTACTaGAACTCAACCACCTTGAGTTTAATGTTATATCAT | + |
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Preference number: 6 (lower is better) Translates to: ERCSLGLLPTPY*NSTTLSLMLYH Trigger: ATGATATAACATTAAACTCAAGGTGGTTGAGTTGCAGTAGGGAGTCGGAAGCAAGCCAAGGGAACATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136409.2 |
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