Pregenerated sensors for SRPX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031253Ensembl transcript IDs: ENSMUST00000033606.15, ENSMUST00000113304.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGTCTACCTCTCTGCTGGGATTCCAAGTGCACACCACCACATCTaGCTATTTTACATGGGTTCTGGGAATCACTCGGGTCTCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: YVYLSAGIPSAHHHI*LFYMGSGNHSGLSA Trigger: AGCACTGAGACCCGAGTGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCACTTGGAATCCCAGCAGAGAGGTAGACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR CCA 90 bp | GATTCCAAGTGCACACCACCACATCTGGCTATTTTACATGGGTTCTaGGAATCACTCGGGTCTCAGTGCTTGATAGCAAGCACTTCACCA | + |
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Preference number: 1 (lower is better) Translates to: DSKCTPPHLAILHGF*ESLGSQCLIASTSP Trigger: TGGTGAAGTGCTTGCTATCAAGCACTGAGACCCGAGTGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCACTTGGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR GCA 90 bp | TCCCCACAGATCTGTTTATGTCTACCTCTCTGCTGGGATTCCAAGTaGACACCACCACATCTGGCTATTTTACATGGGTTCTGGGAATCA | + |
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Preference number: 1 (lower is better) Translates to: SPQICLCLPLCWDSK*TPPHLAILHGFWES Trigger: TGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCACTTGGAATCCCAGCAGAGAGGTAGACATAAACAGATCTGTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR GCA 90 bp | GAGGGAAATCTATTTATACTTGGTCAAAGTGTCTTGTTTGTCTGTTaGAATGCTGCCCCCTGCTGTTATTGTAGGGTAGAGGAACCATTT | + |
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Preference number: 1 (lower is better) Translates to: EGNLFILGQSVLFVC*NAAPCCYCRVEEPF Trigger: AAATGGTTCCTCTACCCTACAATAACAGCAGGGGGCAGCATTGCAACAGACAAACAAGACACTTTGACCAAGTATAAATAGATTTCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCCCCCCACCCGAGGGCTaGTCCCAACAGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ERLWEESRERGSRQVKKAPPPEG*SQQCVC Trigger: ACACACACACTGTTGGGAGCAGCCCTCGGGTGGGGG...GGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGCCCCCACCCGAGGGCTaGTCCCAACAGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSERLWEESRERGSRQVKPPPEG*SQQCVC Trigger: ACACACACACTGTTGGGAGCAGCCCTCGGGTGGGGG...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGCATAGGCTCCTCCAGTaGTACCCGAAGTGGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LSERLWEESRERGSRQVKHRLLQ*YPKWRL Trigger: AAGTCTCCACTTCGGGTAGCACTGGAGGAGCCTATG...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR TCA 72 bp | TTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTaGAGAAGGCCTTCGGTCTACAACTCACCACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: FGKSLEREAPGR*RRPSVYNSPPR Trigger: CCTGGGTGGTGAGTTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGGAACTGTCCTAGATTaGGCAAACCTCACCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: IYLSERLWEESRERGSRQGTVLD*ANLTPT Trigger: GGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCC...CTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCACCCGAAGTGGAGACTaGCTTAGGGAAATGAATATT | + |
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Preference number: 3 (lower is better) Translates to: ERLWEESRERGSRQVKKATRSGD*LREMNI Trigger: AATATTCATTTCCCTAAGCAAGTCTCCACTTCGGGT...GGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| 3UTR CCA 72 bp | TGCACACCACCACATCTGGCTATTTTACATGGGTTCTaGGAATCACTCGGGTCTCAGTGCTTGATAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: CTPPHLAILHGF*ESLGSQCLIAS Trigger: GCTTGCTATCAAGCACTGAGACCCGAGTGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR CCA 72 bp | TTCCAAGTGCACACCACCACATCTGGCTATTTTACATaGGTTCTGGGAATCACTCGGGTCTCAGTGCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: FQVHTTTSGYFT*VLGITRVSVLD Trigger: ATCAAGCACTGAGACCCGAGTGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCACTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGGCTCAAGCAACATTGTTTTTAAGGCCAGCATCCTAGAGGATGACGAGTGTCTTGTTTGTCTGTaGCAATGCTGCCCCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RNGSSNIVFKASILEDDECLVCL*QCCPLL Trigger: CAGCAGGGGGCAGCATTGCAACAGACAAACAAGACA...CTCGTCATCCTCTAGGATGCTGGCCTTAAAAACAATGTTGCTTGAGCCATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGGCTCAAGCAACATTGTTTTTAAGGCCAGCATCCTAGAGGATGACGAGACCCGAAGTGGAGACTaGCTTAGGGAAATGAATATT | + |
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Preference number: 3 (lower is better) Translates to: RNGSSNIVFKASILEDDETRSGD*LREMNI Trigger: AATATTCATTTCCCTAAGCAAGTCTCCACTTCGGGT...CTCGTCATCCTCTAGGATGCTGGCCTTAAAAACAATGTTGCTTGAGCCATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | AATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTCCGCTGAGCTGCAGGTaGGGTAGCCGTGCTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: NAAWNCPRFGKPHPHPRAPLSCR*GSRAVV Trigger: CACCACAGCACGGCTACCTCACCTGCAGCTCAGCGG...AGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | CTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCATAGTTGTCCCCCGCTaGGCTGCAGGTGAGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPGTVLDLANLTPTRGLLIVVPR*AAGEVA Trigger: GGCTACCTCACCTGCAGCTCAGCGGGGGACAACTAT...GAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | CCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAATAGTTGTCCCCCGCTaGGCTGCAGGTGAGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGTVLDLANLTPTRGLLPIVVPR*AAGEVA Trigger: GGCTACCTCACCTGCAGCTCAGCGGGGGACAACTAT...TGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCACCTGCTGATAGTTGTTaGTCCCGGATGCGCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: PGTVLDLANLTPTRGLLPPADSC*SRMRPT Trigger: GGTGGGGCGCATCCGGGAGCAACAACTATCAGCAGG...TGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCTGCTGATAGTTGTTaGTCCCGGATGCGCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LPGTVLDLANLTPTRGLLPADSC*SRMRPT Trigger: GGTGGGGCGCATCCGGGAGCAACAACTATCAGCAGG...GAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCATCGCATAGGTCCCTCTaGTCCACTCTCCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGTVLDLANLTPTRGLLPSHRSL*STLRAS Trigger: GCTGGCACGGAGAGTGGAGCAGAGGGACCTATGCGA...TGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | CTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCGTGAGAACCAGGCTCTaGACCCCGAAGTGTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LPGTVLDLANLTPTRGLLVRTRL*TPKCHP Trigger: AGGGTGACACTTCGGGGTCCAGAGCCTGGTTCTCAC...GAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | ATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTGGCAGACTCGGGATaGGGTCCCCTGGCGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: MLPGTVLDLANLTPTRGLLADSG*GPLAFI Trigger: TATGAACGCCAGGGGACCCCATCCCGAGTCTGCCAG...CAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | ATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGTCTCCTTCAGGGAAGTaGGAACCAGGCTCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: MLPGTVLDLANLTPTRGLSPSGK*EPGSGP Trigger: GGGTCCAGAGCCTGGTTCTCACTTCCCTGAAGGAGA...CAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGCTGCTCCACTCTCCGTaGCAGCTCCTCATTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LDLANLTPTRGLLPTVCVLLHSP*QLLIAQ Trigger: CTGAGCAATGAGGAGCTGGCACGGAGAGTGGAGCAG...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCGTGCCAGCTCCTCATTaGTCAGCAGGTAGTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: LPGTVLDLANLTPTRGLLVPAPH*SAGSHR Trigger: TCGATGACTACCTGCTGAGCAATGAGGAGCTGGCAC...GAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGTGTGTGTGAAGTGTCACCCTGGTaGTGGTACCATCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: WQTSPPPEGCSQQCVCVCEVSPW*WYHQQN Trigger: ATTCTGCTGATGGTACCATCACCAGGGTGACACTTC...ACACACACACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | AATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGGCACCTTATCTGCCTaGAGTAGGCAGTTCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: NAAWNCPRFGKPHPHPRAGTLSA*SRQFQT Trigger: GGTCTGGAACTGCCTACTGCAGGCAGATAAGGTGCC...AGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAACTGGCAGACTCGGGATaGGGTCCCCTGGCGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: EESRERGSRQVKKAFGLQLADSG*GPLAFI Trigger: TATGAACGCCAGGGGACCCCATCCCGAGTCTGCCAG...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAATCTCCTTCAGGGAAGTaGGAACCAGGCTCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: EESRERGSRQVKKAFGLQSPSGK*EPGSGP Trigger: GGGTCCAGAGCCTGGTTCTCACTTCCCTGAAGGAGA...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGCATCTTCCATGCAGATaGGGCTGCGATCTCCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LDLANLTPTRGLLPTVCVHLPCR*GCDLLL Trigger: TAGAAGGAGATCGCAGCCGCATCTGCATGGAAGATG...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | CCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAGCCACTAGTGATGAATaGCAGTGTGTGGCACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: PGTVLDLANLTPTRGLLPATSDE*QCVAPY Trigger: ATAAGGTGCCACACACTGCCATTCATCACTAGTGGC...TGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | CCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTAGTGGTATTCACAGATaGCACCATAGTTGTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PRFGKPHPHPRAAPNSVCSGIHR*HHSCPP Trigger: CGGGGGACAACTATGGTGCCATCTGTGAATACCACT...ACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCATTTCCTCCCCTTGGTaGGTAGCATGTGGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ERLWEESRERGSRQVKKAISSPW*VACGFS Trigger: GGAGAAGCCACATGCTACTCACCAAGGGGAGGAAAT...GGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | CCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTATTTTCTCACGAGAGTaGGGACAACGGATCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PRFGKPHPHPRAAPNSVCIFSRE*GQRILG Trigger: ACCCAAGATCCGTTGTCCTCACTCTCGTGAGAAAAT...ACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCAGAGCTCACAACGTGTaGCTAGGCTACTGTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: LPGTVLDLANLTPTRGLLRAHNV*LGYCDN Trigger: ATTATCACAGTAGCCTAGGCACACGTTGTGAGCTCT...GAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | TGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGTGTGTGTTCCCGGTCAATACCCTaGTTGTCAATTAACACCATG | + |
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Preference number: 4 (lower is better) Translates to: WQTSPPPEGCSQQCVCVCSRSIP*LSINTM Trigger: CATGGTGTTAATTGACAAGCAGGGTATTGACCGGGA...ACACACACACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | TGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGTGTGTGTTTGGTGAGTAGCATGTaGCTTCTCCATCCTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: WQTSPPPEGCSQQCVCVCLVSSM*LLHPGY Trigger: ATATCCAGGATGGAGAAGCCACATGCTACTCACCAA...ACACACACACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGGAGGACAACGGATCTTaGGTGGATCTATGTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: LDLANLTPTRGLLPTVCVEDNGS*VDLCLH Trigger: GTGTAGACATAGATCCACCCAAGATCCGTTGTCCTC...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGCCCCACCTCCTGAGGTaGCTGTCCCACCAGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSERLWEESRERGSRQVKPHLLR*LSHQLN Trigger: ATTGAGCTGGTGGGACAGCCACCTCAGGAGGTGGGG...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | AATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTATTTTCTCACGAGAGTaGGGACAACGGATCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NAAWNCPRFGKPHPHPRAIFSRE*GQRILG Trigger: ACCCAAGATCCGTTGTCCTCACTCTCGTGAGAAAAT...AGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR TCA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGCTTGTACTTTTACAATaGATTTGCAGCTGGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LDLANLTPTRGLLPTVCVLVLLQ*ICSWPG Trigger: ACCGGGCCAGCTGCAAATTCATTGTAAAAGTACAAG...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | CCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTAGCGGGGACCTCTTCTaGATATACTTCATTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PRFGKPHPHPRAAPNSVCSGDLF*IYFIVA Trigger: AGCTACAATGAAGTATATGCAGAAGAGGTCCCCGCT...ACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCTGGAACTGTCCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGAGAGCTCACAACGTGTaGCTAGGCTACTGTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: MLPGTVLDLANLTPTRGLRAHNV*LGYCDN Trigger: ATTATCACAGTAGCCTAGGCACACGTTGTGAGCTCT...CAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGGACAGTTCCAGGCAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR GCA 90 bp | ATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTTGTTGCTCCCGGATaGGCCCCACCTCCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IYLSERLWEESRERGSRQVVAPG*APPPEV Trigger: CACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAAC...CTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS-3UTR CCA 90 bp | CCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTTTGGTGAGTAGCATGTaGCTTCTCCATCCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PRFGKPHPHPRAAPNSVCLVSSM*LLHPGY Trigger: ATATCCAGGATGGAGAAGCCACATGCTACTCACCAA...ACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGACTGCAGAATCCTCTAAGGAAGAGCTGTCACCAGGGTACTAAACACCCCCACCTCCTGAGGTaGCTGTCCCACCAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRLQNPLRKSCHQGTKHPHLLR*LSHQLN Trigger: ATTGAGCTGGTGGGACAGCCACCTCAGGAGGTGGGG...GTGTTTAGTACCCTGGTGACAGCTCTTCCTTAGAGGATTCTGCAGTCTGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAACAGGAGCAGAGACTATaGGGAGTCGCTGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EESRERGSRQVKKAFGLQQEQRL*GVAVSH Trigger: ATGAGAAACAGCGACTCCTCATAGTCTCTGCTCCTG...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGATCGCCCATCTTCCATaGAGATGCGGCTGCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSERLWEESRERGSRQVKIAHLP*RCGCDL Trigger: GAGATCGCAGCCGCATCTGCATGGAAGATGGGCGAT...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | GGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGTCGCATAGGTCCCTCTaGTCCACTCTCCGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIYLSERLWEESRERGSRSHRSL*STLRAS Trigger: GCTGGCACGGAGAGTGGAGCAGAGGGACCTATGCGA...CCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTACAACGGATCTTGGGTaGATCTATGTCTACACATAC | + |
|
Preference number: 4 (lower is better) Translates to: PRFGKPHPHPRAAPNSVCTTDLG*IYVYTY Trigger: GTATGTGTAGACATAGATCCACCCAAGATCCGTTGT...ACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAAAGTGGTATTCACAGATaGCACCATAGTTGTCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EESRERGSRQVKKAFGLQSGIHR*HHSCPP Trigger: CGGGGGACAACTATGGTGCCATCTGTGAATACCACT...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTCCCGGTCAATACCCTaGTTGTCAATTAACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: ERLWEESRERGSRQVKKASRSIP*LSINTM Trigger: CATGGTGTTAATTGACAAGCAGGGTATTGACCGGGA...GGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGGTGAGAACCAGGCTCTaGACCCCGAAGTGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GIYLSERLWEESRERGSRVRTRL*TPKCHP Trigger: AGGGTGACACTTCGGGGTCCAGAGCCTGGTTCTCAC...CCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR TCA 90 bp | GTTCACAGACTGCAGAATCCTCTAAGGAAGAGCTGTCACCAGGGTACTAAACACATTTCCTCCCCTTGGTaGGTAGCATGTGGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHRLQNPLRKSCHQGTKHISSPW*VACGFS Trigger: GGAGAAGCCACATGCTACTCACCAAGGGGAGGAAAT...GTGTTTAGTACCCTGGTGACAGCTCTTCCTTAGAGGATTCTGCAGTCTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAACTTGTACTTTTACAATaGATTTGCAGCTGGCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EESRERGSRQVKKAFGLQLVLLQ*ICSWPG Trigger: ACCGGGCCAGCTGCAAATTCATTGTAAAAGTACAAG...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | GTTCACAGACTGCAGAATCCTCTAAGGAAGAGCTGTCACCAGGGTACTAAACACCATCTTCCATGCAGATaGGGCTGCGATCTCCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHRLQNPLRKSCHQGTKHHLPCR*GCDLLL Trigger: TAGAAGGAGATCGCAGCCGCATCTGCATGGAAGATG...GTGTTTAGTACCCTGGTGACAGCTCTTCCTTAGAGGATTCTGCAGTCTGTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGCTCAAGCAACATTGTTTTTAAGGCCAGCATCCTAGAGGATGACGAGATCGCCCATCTTCCATaGAGATGCGGCTGCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNGSSNIVFKASILEDDEIAHLP*RCGCDL Trigger: GAGATCGCAGCCGCATCTGCATGGAAGATGGGCGAT...CTCGTCATCCTCTAGGATGCTGGCCTTAAAAACAATGTTGCTTGAGCCATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCTTCAAGAATGTTTTGTAGATCCTAGTCTCCTCTCTCCTGTTCCTCACGTGCCAGCTCCTCATTaGTCAGCAGGTAGTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: EQLQECFVDPSLLSPVPHVPAPH*SAGSHR Trigger: TCGATGACTACCTGCTGAGCAATGAGGAGCTGGCAC...GTGAGGAACAGGAGAGAGGAGACTAGGATCTACAAAACATTCTTGAAGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGGCCACTAGTGATGAATaGCAGTGTGTGGCACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSERLWEESRERGSRQVKATSDE*QCVAPY Trigger: ATAAGGTGCCACACACTGCCATTCATCACTAGTGGC...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGAATGAATTTGGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGCCGCTGAGCTGCAGGTaGGGTAGCCGTGCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGMNLVFTYLKGFGKSLEPLSCR*GSRAVV Trigger: CACCACAGCACGGCTACCTCACCTGCAGCTCAGCGG...CTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACCAAATTCATTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGGAGGACAACGGATCTTaGGTGGATCTATGTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GIYLSERLWEESRERGSREDNGS*VDLCLH Trigger: GTGTAGACATAGATCCACCCAAGATCCGTTGTCCTC...CCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCTTCAAGAATGTTTTGTAGATCCTAGTCTCCTCTCTCCTGTTCCTCACAGCGGGGACCTCTTCTaGATATACTTCATTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQLQECFVDPSLLSPVPHSGDLF*IYFIVA Trigger: AGCTACAATGAAGTATATGCAGAAGAGGTCCCCGCT...GTGAGGAACAGGAGAGAGGAGACTAGGATCTACAAAACATTCTTGAAGCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| 3UTR CAA 72 bp | TGTGAGGGAAATCTATTTATACTTGGTCAAAGTGTCTaGTTTGTCTGTTGCAATGCTGCCCCCTGCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CEGNLFILGQSV*FVCCNAAPCCY Trigger: ATAACAGCAGGGGGCAGCATTGCAACAGACAAACAAGACACTTTGACCAAGTATAAATAGATTTCCCTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGAATGAATTTGGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGCAGGAGCAGAGACTATaGGGAGTCGCTGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGMNLVFTYLKGFGKSLEQEQRL*GVAVSH Trigger: ATGAGAAACAGCGACTCCTCATAGTCTCTGCTCCTG...CTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACCAAATTCATTCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 90 bp | ATGATGCCTGCTGATAGTTGTTGCTCCCGGATGCGCCCCACCTCCTaGGGTGGCTGTCCCACCAGCTCAATAATGGTCACATGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MMPADSCCSRMRPTS*GGCPTSSIMVTCRR Trigger: CCTGCGGCATGTGACCATTATTGAGCTGGTGGGACAGCCACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAACTATCAGCAGGCATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 90 bp | GGTATTCACAGATGGCACCATAGTTGTCCCCCGCTGAGCTGCAGGTaGGGTAGCCGTGCTGTGGTGGCTTCAGAATGGGACAGCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GIHRWHHSCPPLSCR*GSRAVVASEWDSVS Trigger: TGAGACGCTGTCCCATTCTGAAGCCACCACAGCACGGCTACCTCACCTGCAGCTCAGCGGGGGACAACTATGGTGCCATCTGTGAATACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 90 bp | GCAGTAGGCAGTTCCAGACCAACGCCGGCTTGGCAAACATTGCACTaGCTTCCGTCCAATCAATCGAAAGCCCCGGTCACAGGAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVGSSRPTPAWQTLH*LPSNQSKAPVTGEL Trigger: GAGCTCTCCTGTGACCGGGGCTTTCGATTGATTGGACGGAAGTCAGTGCAATGTTTGCCAAGCCGGCGTTGGTCTGGAACTGCCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS GCA 90 bp | GTCCAATCAATCGAAAGCCCCGGTCACAGGAGAGCTCACAACGTGTaGCTAGGCTACTGTGATAATTTCCTCCCCTTGGTGAGTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VQSIESPGHRRAHNV*LGYCDNFLPLVSSM Trigger: CATGCTACTCACCAAGGGGAGGAAATTATCACAGTAGCCTAGGCACACGTTGTGAGCTCTCCTGTGACCGGGGCTTTCGATTGATTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CCA 90 bp | AAGCAGCATTCCATTGGTGCACGTATAGGTGCCACTAGTGATGAATaGCAGTGTGTGGCACCTTATCTGCCTGCAGTAGGCAGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQHSIGARIGATSDE*QCVAPYLPAVGSSR Trigger: TCTGGAACTGCCTACTGCAGGCAGATAAGGTGCCACACACTGCCATTCATCACTAGTGGCACCTATACGTGCACCAATGGAATGCTGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGGGGACAGCGTCTCACTaGTACTTTTACAATGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LDLANLTPTRGLLPTVCVGTASH*YFYNEF Trigger: AAATTCATTGTAAAAGTACAAGTGAGACGCTGTCCC...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | CTAGATTTGGCAAACCTCACCCCCACCCGAGGGCTGCTCCCAACAGTGTGTGTGGCAGCCGAGTTAACATaGACATTAATCTTCATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDLANLTPTRGLLPTVCVAAELT*TLIFIG Trigger: TCCTATGAAGATTAATGTCAATGTTAACTCGGCTGC...CACACACACTGTTGGGAGCAGCCCTCGGGTGGGGGTGAGGTTTGCCAAATCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAGTGAGGCGCTGGAATaGCCTGAGCTCCTCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSERLWEESRERGSRQVKSEALE*PELLND Trigger: ATCATTGAGGAGCTCAGGCAATTCCAGCGCCTCACT...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 90 bp | GTGGTGGCTTCAGAATGGGACAGCGTCTCACTTGTACTTTTACAATaGATTTGCAGCTGGCCCGGTTGTAGGCTCGGTCATAGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VVASEWDSVSLVLLQ*ICSWPGCRLGHRQY Trigger: ATACTGCCTATGACCGAGCCTACAACCGGGCCAGCTGCAAATTCATTGTAAAAGTACAAGTGAGACGCTGTCCCATTCTGAAGCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | GTTCACAGACTGCAGAATCCTCTAAGGAAGAGCTGTCACCAGGGTACTAAACACAGTGAGGCGCTGGAATaGCCTGAGCTCCTCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHRLQNPLRKSCHQGTKHSEALE*PELLND Trigger: ATCATTGAGGAGCTCAGGCAATTCCAGCGCCTCACT...GTGTTTAGTACCCTGGTGACAGCTCTTCCTTAGAGGATTCTGCAGTCTGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS TCA 90 bp | ACTCGAGCAGTTAGTTTCTCTGGCTCTGCCATTTTCTCACGAGAGTaGGGACAACGGATCTTGGGTGGATCTATGTCTACACATACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRAVSFSGSAIFSRE*GQRILGGSMSTHTG Trigger: GCCTGTATGTGTAGACATAGATCCACCCAAGATCCGTTGTCCTCACTCTCGTGAGAAAATGGCAGAGCCAGAGAAACTAACTGCTCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CCA 90 bp | TGCCTAGGCTACTGTGATAATTTCCTCCCCTTGGTGAGTAGCATGTaGCTTCTCCATCCTGGATATTCAATGTGTAACACCATCGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLGYCDNFLPLVSSM*LLHPGYSMCNTIGG Trigger: TCCCCCGATGGTGTTACACATTGAATATCCAGGATGGAGAAGCCACATGCTACTCACCAAGGGGAGGAAATTATCACAGTAGCCTAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGAAGGCCTTCGGTCTACAAGGGACAGCGTCTCACTaGTACTTTTACAATGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: EESRERGSRQVKKAFGLQGTASH*YFYNEF Trigger: AAATTCATTGTAAAAGTACAAGTGAGACGCTGTCCC...TTGTAGACCGAAGGCCTTCTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGCACACCACCACATCTGGCTATTTTACATGGGTTCTGGGAATCACTCGGGCGGTCAATACCCTGCTaGTCAATTAACACCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KCTPPHLAILHGFWESLGRSIPC*SINTML Trigger: CAACATGGTGTTAATTGACAAGCAGGGTATTGACCG...CCCGAGTGATTCCCAGAACCCATGTAAAATAGCCAGATGTGGTGGTGTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGGTGAAGGCAGCCGAGTTAACATaGACATTAATCTTCATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSERLWEESRERGSRQVKAAELT*TLIFIG Trigger: TCCTATGAAGATTAATGTCAATGTTAACTCGGCTGC...CTTCACCTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | ATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGAGAGAGGCTCCAGGCAGCGGTCAATACCCTGCTaGTCAATTAACACCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IYLSERLWEESRERGSRQRSIPC*SINTML Trigger: CAACATGGTGTTAATTGACAAGCAGGGTATTGACCG...CTGCCTGGAGCCTCTCTCTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATGAATTTGGTATTTACTTATCTGAAAGGCTTTGGGAAGAGTCTAGAGGAGTCCACAGGTGGATaGCTGCAGCATAGAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGMNLVFTYLKGFGKSLEESTGG*LQHRDL Trigger: CAAATCTCTATGCTGCAGCAATCCACCTGTGGACTC...CTCTAGACTCTTCCCAAAGCCTTTCAGATAAGTAAATACCAAATTCATTCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 72 bp | AGATGGCACCATAGTTGTCCCCCGCTGAGCTGCAGGTaGGGTAGCCGTGCTGTGGTGGCTTCAGAATGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RWHHSCPPLSCR*GSRAVVASEWD Trigger: GTCCCATTCTGAAGCCACCACAGCACGGCTACCTCACCTGCAGCTCAGCGGGGGACAACTATGGTGCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 72 bp | GCTGATAGTTGTTGCTCCCGGATGCGCCCCACCTCCTaGGGTGGCTGTCCCACCAGCTCAATAATGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: ADSCCSRMRPTS*GGCPTSSIMVT Trigger: TGTGACCATTATTGAGCTGGTGGGACAGCCACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAACTATCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS GCA 72 bp | ATACAGGCTCGCCTCCACTCCATCGCCCATCTTCCATaGAGATGCGGCTGCGATCTCCTTCTAGGTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IQARLHSIAHLP*RCGCDLLLGGS Trigger: GCTACCACCTAGAAGGAGATCGCAGCCGCATCTGCATGGAAGATGGGCGATGGAGTGGAGGCGAGCCTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CAA 90 bp | GGCACCTTATCTGCCTGCAGTAGGCAGTTCCAGACCAACGCCGGCTaGGCAAACATTGCACTGACTTCCGTCCAATCAATCGAAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GTLSACSRQFQTNAG*ANIALTSVQSIESP Trigger: GGGGCTTTCGATTGATTGGACGGAAGTCAGTGCAATGTTTGCCAAGCCGGCGTTGGTCTGGAACTGCCTACTGCAGGCAGATAAGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS TCA 72 bp | AGTTCCAGACCAACGCCGGCTTGGCAAACATTGCACTaGCTTCCGTCCAATCAATCGAAAGCCCCGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SSRPTPAWQTLH*LPSNQSKAPVT Trigger: TGTGACCGGGGCTTTCGATTGATTGGACGGAAGTCAGTGCAATGTTTGCCAAGCCGGCGTTGGTCTGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CAA 72 bp | TCTGCCTGCAGTAGGCAGTTCCAGACCAACGCCGGCTaGGCAAACATTGCACTGACTTCCGTCCAATCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SACSRQFQTNAG*ANIALTSVQSI Trigger: GATTGATTGGACGGAAGTCAGTGCAATGTTTGCCAAGCCGGCGTTGGTCTGGAACTGCCTACTGCAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CCA 72 bp | TCCATTGGTGCACGTATAGGTGCCACTAGTGATGAATaGCAGTGTGTGGCACCTTATCTGCCTGCAGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIGARIGATSDE*QCVAPYLPAVG Trigger: GCCTACTGCAGGCAGATAAGGTGCCACACACTGCCATTCATCACTAGTGGCACCTATACGTGCACCAATGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
||
| CDS CCA 72 bp | CTGCCATTTTCTCACGAGAGTGAGGACAACGGATCTTaGGTGGATCTATGTCTACACATACAGGCTCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPFSHESEDNGS*VDLCLHIQARL Trigger: GAGGCGAGCCTGTATGTGTAGACATAGATCCACCCAAGATCCGTTGTCCTCACTCTCGTGAGAAAATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS CAA 72 bp | GTCGAGTCCACAGGTGGATTGCTGCAGCATAGAGATTaGCATTTTGTAGTACCGATTGGAGGGATCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VESTGGLLQHRD*HFVVPIGGIRS Trigger: GCTCCTGATCCCTCCAATCGGTACTACAAAATGCAAATCTCTATGCTGCAGCAATCCACCTGTGGACTCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS TCA 72 bp | TCAGAATGGGACAGCGTCTCACTTGTACTTTTACAATaGATTTGCAGCTGGCCCGGTTGTAGGCTCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SEWDSVSLVLLQ*ICSWPGCRLGH Trigger: ATGACCGAGCCTACAACCGGGCCAGCTGCAAATTCATTGTAAAAGTACAAGTGAGACGCTGTCCCATTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS CAA 90 bp | AGAGCTCACAACGTGTGCCTAGGCTACTGTGATAATTTCCTCCCCTaGGTGAGTAGCATGTGGCTTCTCCATCCTGGATATTCAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: RAHNVCLGYCDNFLP*VSSMWLLHPGYSMC Trigger: ACACATTGAATATCCAGGATGGAGAAGCCACATGCTACTCACCAAGGGGAGGAAATTATCACAGTAGCCTAGGCACACGTTGTGAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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| CDS CCA 72 bp | TACTGTGATAATTTCCTCCCCTTGGTGAGTAGCATGTaGCTTCTCCATCCTGGATATTCAATGTGTAACACC | + |
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Preference number: 6 (lower is better) Translates to: YCDNFLPLVSSM*LLHPGYSMCNT Trigger: GGTGTTACACATTGAATATCCAGGATGGAGAAGCCACATGCTACTCACCAAGGGGAGGAAATTATCACAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033606.15 ENSMUST00000113304.2 |
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