Pregenerated sensors for SRPX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090084Ensembl transcript IDs: ENSMUST00000044789.10, ENSMUST00000115543.3, ENSMUST00000115544.9
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGGGTGGGGTGCAGTCAAGAATACAGCCCTACTGGCCCATCATaGTTGTTCATTCACAAACTCAGGAATGATTGGTTCCAGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: LWVGCSQEYSPTGPS*LFIHKLRNDWFQDP Trigger: GGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTCTTGACTGCACCCCACCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR TCA 90 bp | TCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCATGTaGATCCCCTTGTATACTTTAAACCTCTCTGGACTACTTATAGTA | + |
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Preference number: 1 (lower is better) Translates to: STCDIKSSSTYMESM*IPLYTLNLSGLLIV Trigger: TACTATAAGTAGTCCAGAGAGGTTTAAAGTATACAAGGGGATTCACATGGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCCTCTCTCAGCTCAGTTaGCCCCTTGACAGGACTAGT | + |
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Preference number: 2 (lower is better) Translates to: PNSHSTCDIKSSSTYMESLSQLS*PLDRTS Trigger: ACTAGTCCTGTCAAGGGGTCAACTGAGCTGAGAGAG...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR-3UTR TCA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATTACATGGAATCCATGTaGATCCCCTTGTATACTTTA | + |
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Preference number: 2 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDYMESM*IPLYTL Trigger: TAAAGTATACAAGGGGATTCACATGGATTCCATGTA...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTTCACAAACTCAGGAATaGTTGGTTCCAGGATCCCAA | + |
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Preference number: 2 (lower is better) Translates to: IEISEKGSDVQPLNCHLSSQTQE*LVPGSQ Trigger: TTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGA...AGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTGAGGAATATTCTGAGTaGATGAGTGTGGCTGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: IEISEKGSDVQPLNCHLSEEYSE*MSVAVA Trigger: AGCTACAGCCACACTCATGCACTCAGAATATTCCTC...AGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR CCA 72 bp | TCTGATGTACAACCTCTGAATTGTCACCTCTCTGGGTaGGGTGCAGTCAAGAATACAGCCCTACTGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: SDVQPLNCHLSG*GAVKNTALLAH Trigger: ATGGGCCAGTAGGGCTGTATTCTTGACTGCACCCCACCCAGAGAGGTGACAATTCAGAGGTTGTACATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR TCA 72 bp | CCCACTTGGGAACGTAGCTCTCTCTCTCAGCTCAGTTaGCCCCTTGACAGGACTAGTTTCCCTTTCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: PTWERSSLSQLS*PLDRTSFPFLR Trigger: TCTTAAGAAAGGGAAACTAGTCCTGTCAAGGGGTCAACTGAGCTGAGAGAGAGAGCTACGTTCCCAAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR CCA 72 bp | TCTCTGGGTGGGGTGCAGTCAAGAATACAGCCCTACTaGCCCATCATGCTTGTTCATTCACAAACTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SLGGVQSRIQPY*PIMLVHSQTQE Trigger: TTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTCTTGACTGCACCCCACCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR GCA 72 bp | GGGTGCAGTCAAGAATACAGCCCTACTGGCCCATCATaGTTGTTCATTCACAAACTCAGGAATGATTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GCSQEYSPTGPS*LFIHKLRNDWF Trigger: GAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTCTTGACTGCACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR TCA 72 bp | TGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATaGTTGGTTCCAGGATCCCAACAGTCATTCGACTTG | + |
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Preference number: 3 (lower is better) Translates to: WPIMLVHSQTQE*LVPGSQQSFDL Trigger: CAAGTCGAATGACTGTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR CCA 72 bp | CCATCATGCTTGTTCATTCACAAACTCAGGAATGATTaGTTCCAGGATCCCAACAGTCATTCGACTTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: PSCLFIHKLRND*FQDPNSHSTCD Trigger: ATCACAAGTCGAATGACTGTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR-3UTR CAA 90 bp | CCATCATGCTTGTTCATTCACAAACTCAGGAATGATTGGTTCCAGGATCCCAACCTGAATATTTTCAATTaGCTATTCTCCCACTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PSCLFIHKLRNDWFQDPNLNIFN*LFSHLG Trigger: TCCCAAGTGGGAGAATAGCAAATTGAAAATATTCAG...GTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| 3UTR GCA 72 bp | AAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTaGATGAGTGTGGCTGTAGCTTCTAATTTCATCAGC | + |
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Preference number: 3 (lower is better) Translates to: KENMFHTEEYSE*MSVAVASNFIS Trigger: GCTGATGAAATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| 3UTR TCA 72 bp | GATATCAAATCGTCCAGTACTTACATGGAATCCATGTaGATCCCCTTGTATACTTTAAACCTCTCTGGACTA | + |
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Preference number: 3 (lower is better) Translates to: DIKSSSTYMESM*IPLYTLNLSGL Trigger: TAGTCCAGAGAGGTTTAAAGTATACAAGGGGATTCACATGGATTCCATGTAAGTACTGGACGATTTGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR TCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCAACAGCGGCAGTACTTaGGGCAGCAGCAGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PNSHSTCDIKSSSTYMESNSGST*GSSSSG Trigger: GCCCGAGCTGCTGCTGCCTCAAGTACTGCCGCTGTT...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | GAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTGGGGTATCCCCCAGGAGGTaGCCTGCAGTACACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: EISEKGSDVQPLNCHLSGVSPRR*PAVHIP Trigger: GGGGATGTGTACTGCAGGGCACCTCCTGGGGGATAC...CCCAGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | CCATCATGCTTGTTCATTCACAAACTCAGGAATGATTGGTTCCAGGATCCCAACCACAGCTGGGCTCTGTaGCGGACCAAGCCAGATTGG | + |
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Preference number: 4 (lower is better) Translates to: PSCLFIHKLRNDWFQDPNHSWAL*RTKPDW Trigger: CCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGTG...GTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR TCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATAACAGCGGCAGTACTTaGGGCAGCAGCAGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNNSGST*GSSSSG Trigger: GCCCGAGCTGCTGCTGCCTCAAGTACTGCCGCTGTT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDPHTSP*WESTTE Trigger: CTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGG...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CCA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGTCATCGCTGCACAGCTaGGCTCTGTGCCGGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: RIPTVIRLVISNRPVLTWSSLHS*ALCRTK Trigger: CTTGGTCCGGCACAGAGCCCAGCTGTGCAGCGATGA...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR TCA 90 bp | ATAGAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTCCAGCTCCACCACGGTaGCATGTCGGAGATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IEISEKGSDVQPLNCHLSPAPPR*HVGDRG Trigger: GCCTCGATCTCCGACATGTCACCGTGGTGGAGCTGG...AGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATGTATCCCCCAGGAGGTaGCCTGCAGTACACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNVSPRR*PAVHIP Trigger: GGGGATGTGTACTGCAGGGCACCTCCTGGGGGATAC...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCCAGCTCCACCACGGTaGCATGTCGGAGATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVPAPPR*HVGDRG Trigger: GCCTCGATCTCCGACATGTCACCGTGGTGGAGCTGG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCCCCAGGAGGTGCCCTaGAGTACACATCCCCATACT | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNPQEVP*STHPHT Trigger: AGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGCGGACCAAGCCAGATTaGATTGGCATACTCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RIPTVIRLVISNRPVLTWRTKPD*IGILGQ Trigger: CTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCG...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR TCA 90 bp | CCATCATGCTTGTTCATTCACAAACTCAGGAATGATTGGTTCCAGGATCCCAACTGTTTGACTGGCAGATaGGCTGGGAAGAGCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: PSCLFIHKLRNDWFQDPNCLTGR*AGKSHE Trigger: TTCATGGCTCTTCCCAGCTCATCTGCCAGTCAAACA...GTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCACAGCTGGGCTCTGTaGCGGACCAAGCCAGATTGG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVHSWAL*RTKPDW Trigger: CCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGTG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATAGGCCACACTGTGCTTaGTGTAGCATTCCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNRPHCA*CSIPSC Trigger: GCAGCTGGGAATGCTACAGCAAGCACAGTGTGGCCT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCGGACCAAGCCAGATTaGATTGGCATACTCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNRTKPD*IGILGQ Trigger: CTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTCATCGCTGCACAGCTaGGCTCTGTGCCGGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVSSLHS*ALCRTK Trigger: CTTGGTCCGGCACAGAGCCCAGCTGTGCAGCGATGA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVPHTSP*WESTTE Trigger: CTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATTTCGAAGCAACAGCCTaGGCTGTAGAGCTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNFEATA*AVELEL Trigger: CAGCTCTAGCTCTACAGCTCAGGCTGTTGCTTCGAA...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | CCATCATGCTTGTTCATTCACAAACTCAGGAATGATTGGTTCCAGGATCCCAACTGGAGGCATAATCTTTaGTCTGATCCTGCCGATGAG | + |
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Preference number: 4 (lower is better) Translates to: PSCLFIHKLRNDWFQDPNWRHNL*SDPADE Trigger: CTCATCGGCAGGATCAGAGCAAAGATTATGCCTCCA...GTTGGGATCCTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGATCTACACAGGAGGCTaGTCGGCCACTCCAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVIYTGG*SATPGL Trigger: AAGGCCTGGAGTGGCCGACCAGCCTCCTGTGTAGAT...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | ATAGAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTTGTATCTCTTCCCTCTaGGCTTTCCCAGGACACCCG | + |
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Preference number: 4 (lower is better) Translates to: IEISEKGSDVQPLNCHLSCISSL*AFPGHP Trigger: CGGGTGTCCTGGGAAAGCCCAGAGGGAAGAGATACA...AGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCCAAGCCAGATTGGATTaGCATACTCGGGCAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: PNSHSTCDIKSSSTYMESQARLD*HTRAGL Trigger: TAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTG...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCAGACGTTGCAAGTCTaGCCCATCTCAGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVQTLQV*PISACR Trigger: CCTGCAGGCTGAGATGGGCCAGACTTGCAACGTCTG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| 3UTR CAA 72 bp | TGCAGTCAAGAATACAGCCCTACTGGCCCATCATGCTaGTTCATTCACAAACTCAGGAATGATTGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSQEYSPTGPSC*FIHKLRNDWFQ Trigger: CTGGAACCAATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTCTTGACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | AGTTTTAAAACTACTGATCATGCCAAGCAAATAAGCCTGGTGCTTGAGTATTTTCCCCAGGAGGTGCCCTaGAGTACACATCCCCATACT | + |
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Preference number: 4 (lower is better) Translates to: SFKTTDHAKQISLVLEYFPQEVP*STHPHT Trigger: AGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGG...AAAATACTCAAGCACCAGGCTTATTTGCTTGGCATGATCAGTAGTTTTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGAGGCCACACTGTGCTTaGTGTAGCATTCCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVRPHCA*CSIPSC Trigger: GCAGCTGGGAATGCTACAGCAAGCACAGTGTGGCCT...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTGTATCTCTTCCCTCTaGGCTTTCCCAGGACACCCG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVCISSL*AFPGHP Trigger: CGGGTGTCCTGGGAAAGCCCAGAGGGAAGAGATACA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | GAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTGGGCAATGTATATCCTGGTaGACAATAGTACTCACACCG | + |
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Preference number: 4 (lower is better) Translates to: EISEKGSDVQPLNCHLSGQCISW*TIVLTP Trigger: CGGTGTGAGTACTATTGTTCACCAGGATATACATTG...CCCAGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR TCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATTGTTGTCCATACATGTaGCTGTTCGCTCCCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNCCPYM*LFAPLS Trigger: TGAAAGGGGAGCGAACAGTCACATGTATGGACAACA...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR TCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTTCGAAGCAACAGCCTaGGCTGTAGAGCTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVFEATA*AVELEL Trigger: CAGCTCTAGCTCTACAGCTCAGGCTGTTGCTTCGAA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCATCCAGAAGTGCAGCTaGTGTTCTGACACCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: PNSHSTCDIKSSSTYMESIQKCS*CSDTNI Trigger: AATGTTGGTGTCAGAACAGCAGCTGCACTTCTGGAT...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CCA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGACGTTCTTTCACACTTaGGCACTTGATTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPTVIRLVISNRPVLTWTFFHT*ALDSRR Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAAGAACGT...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCATGTAACCATTTTCTaGGGCATTGAGCTTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNHVTIF*GIELAT Trigger: TGTGGCAAGCTCAATGCCCCAGAAAATGGTTACATG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCAGGAGAATTCACAGGTaGCTCCATAATTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNSHSTCDIKSSSTYMESRRIHR*LHNCHH Trigger: ATGGTGACAATTATGGAGCCACCTGTGAATTCTCCT...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCAAGCCAGATTGGATTaGCATACTCGGGCAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVQARLD*HTRAGL Trigger: TAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCAATGTATATCCTGGTaGACAATAGTACTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNQCISW*TIVLTP Trigger: CGGTGTGAGTACTATTGTTCACCAGGATATACATTG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTGTTGTCCATACATGTaGCTGTTCGCTCCCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVCCPYM*LFAPLS Trigger: TGAAAGGGGAGCGAACAGTCACATGTATGGACAACA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | AGTTTTAAAACTACTGATCATGCCAAGCAAATAAGCCTGGTGCTTGAGTATTTTCTTAAACCCTCCATTTaGCGGCATGGTAAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFKTTDHAKQISLVLEYFLKPSI*RHGKGR Trigger: CCTACCCTTACCATGCCGGCAAATGGAGGGTTTAAG...AAAATACTCAAGCACCAGGCTTATTTGCTTGGCATGATCAGTAGTTTTAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGAAACTGATCCAGAAGTaGAGCTGCTGTTCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVKLIQK*SCCSDT Trigger: GGTGTCAGAACAGCAGCTGCACTTCTGGATCAGTTT...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTGGAGGCATAATCTTTaGTCTGATCCTGCCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVWRHNL*SDPADE Trigger: CTCATCGGCAGGATCAGAGCAAAGATTATGCCTCCA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR GCA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCAACGTTCTTTATCCATaGCATGCTTATCCACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSHSTCDIKSSSTYMESNVLYP*HAYPLP Trigger: TGGTAGTGGATAAGCATGGCATGGATAAAGAACGTT...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CCA 90 bp | GAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTGGGGTGTACTCAATCTTGTaGTCTCCTTCTGGAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: EISEKGSDVQPLNCHLSGVYSIL*SPSGKF Trigger: AAATTTTCCAGAAGGAGACCACAAGATTGAGTACAC...CCCAGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATAGGAGAATTCACAGGTaGCTCCATAATTGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNRRIHR*LHNCHH Trigger: ATGGTGACAATTATGGAGCCACCTGTGAATTCTCCT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGATCCAGAAGTGCAGCTaGTGTTCTGACACCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVIQKCS*CSDTNI Trigger: AATGTTGGTGTCAGAACAGCAGCTGCACTTCTGGAT...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATAACGTTCTTTATCCATaGCATGCTTATCCACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: MFHTEEYSECMSVAVASNNVLYP*HAYPLP Trigger: TGGTAGTGGATAAGCATGGCATGGATAAAGAACGTT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGACGTTCTTTCACACTTaGGCACTTGATTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVTFFHT*ALDSRR Trigger: CCTCCTAGAATCAAGTGCCCAAGTGTGAAAGAACGT...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCATGTAACCATTTTCTaGGGCATTGAGCTTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVHVTIF*GIELAT Trigger: TGTGGCAAGCTCAATGCCCCAGAAAATGGTTACATG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGTGTACTCAATCTTGTaGTCTCCTTCTGGAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KKKENMFHTEEYSECMSVVYSIL*SPSGKF Trigger: AAATTTTCCAGAAGGAGACCACAAGATTGAGTACAC...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS CCA 90 bp | TTTGCCGGCATGGTAAGGGTAGGACATCGCTTCTCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGCGGCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: FAGMVRVGHRFSGKP*LGRTCSSASNSGST Trigger: AGTACTGCCGCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGAGAAGCGATGTCCTACCCTTACCATGCCGGCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115543.3 |
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| CDS CCA 90 bp | TACTTCACCTTGATGGGAGAGCACCACGGAGTGTCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGCGGCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: YFTLMGEHHGVSGKP*LGRTCSSASNSGST Trigger: AGTACTGCCGCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
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| CDS CCA 90 bp | CACATCCCCATACTTCACCTTGATGGGAGAGCACCACGGAGTGTCTaGGAAGCCCTGGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HIPILHLDGRAPRSV*EALARQDVQQRQQQ Trigger: CTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
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| CDS TCA 90 bp | ATCCCCCAGGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAGTGTCTGGGAAGCCCTGGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPQEVPCSTHPHTSP*WESTTECLGSPGSA Trigger: TGCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
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| CDS CCA 90 bp | ACTCCATCGTCTTCTAGTGGTGAGTCTCCAGATCCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGCGGCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: TPSSSSGESPDPGKP*LGRTCSSASNSGST Trigger: AGTACTGCCGCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGGATCTGGAGACTCACCACTAGAAGACGATGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS CCA 90 bp | CATTCATCGCTGCACAGCTGGGCTCTGTGCCGGACCAAGCCAGATTaGATTGGCATACTCGGGCAGGACTACCCTGAAGCTCATAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSLHSWALCRTKPD*IGILGQDYPEAHSR Trigger: GCGGCTATGAGCTTCAGGGTAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGTGCAGCGATGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS CCA 90 bp | AAGAGCCATGAAGCTCATAGCCCTTTCGGCAGCGAATGTCACATCTaGTTCCCAAGGCTGTTTTGTAGTATCCCCCAGGAGGTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSHEAHSPFGSECHI*FPRLFCSIPQEVPC Trigger: GCAGGGCACCTCCTGGGGGATACTACAAAACAGCCTTGGGAACCAGATGTGACATTCGCTGCCGAAAGGGCTATGAGCTTCATGGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS GCA 90 bp | CCGAGAGTTAAAGTAGGCACCATCGACACACTTAAACCCTCCATTTaGCGGCATGGTAAGGGTAGGACATCGCTTCTCTGGGAAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRVKVGTIDTLKPSI*RHGKGRTSLLWEAL Trigger: CAGGGCTTCCCAGAGAAGCGATGTCCTACCCTTACCATGCCGGCAAATGGAGGGTTTAAGTGTGTCGATGGTGCCTACTTTAACTCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115543.3 |
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| CDS CCA 90 bp | CAGAATAACATCAGTAAGAATCCCATCCGCTGTATCTCTTCCCTCTaGGCTTTCCCAGGACACCCGGACTGTCAGCTTATTGGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNNISKNPIRCISSL*AFPGHPDCQLIGLS Trigger: GCTGAGCCCAATAAGCTGACAGTCCGGGTGTCCTGGGAAAGCCCAGAGGGAAGAGATACAGCGGATGGGATTCTTACTGATGTTATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS TCA 90 bp | ATCCCCCAGGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAGTGTCTTTATATAGAGAGTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IPQEVPCSTHPHTSP*WESTTECLYIESVN Trigger: ATTCACACTCTCTATATAAAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS TCA 90 bp | CACAGGAGGCTGGTCGGCCACTCCAGGCCTTGTTGTCCATACATGTaGCTGTTCGCTCCCCTTTCAATGTATATCCTGGTGAACAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HRRLVGHSRPCCPYM*LFAPLSMYILVNNS Trigger: ACTATTGTTCACCAGGATATACATTGAAAGGGGAGCGAACAGTCACATGTATGGACAACAAGGCCTGGAGTGGCCGACCAGCCTCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS CCA 90 bp | CCGGACTGTCAGCTTATTGGGCTCAGCTATACGTTCTTTCACACTTaGGCACTTGATTCTAGGAGGTTCCAGATCTACACAGGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDCQLIGLSYTFFHT*ALDSRRFQIYTGGW Trigger: CCAGCCTCCTGTGTAGATCTGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAATAAGCTGACAGTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS GCA 90 bp | CCGAGAGTTAAAGTAGGCACCATCGACACACTTAAACCCTCCATTTaGCGGCATGGTAAGGGTAGGACATCGCTTCTGTTTGCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRVKVGTIDTLKPSI*RHGKGRTSLLFADD Trigger: GTCATCTGCAAACAGAAGCGATGTCCTACCCTTACCATGCCGGCAAATGGAGGGTTTAAGTGTGTCGATGGTGCCTACTTTAACTCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CAA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATCGGCCACTCCAGGCCTaGTTGTCCATACATGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDRPLQA*LSIHVT Trigger: AGTCACATGTATGGACAACAAGGCCTGGAGTGGCCG...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CAA 90 bp | CCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGAATCCCCGGACCAAGCCAGATaGGATTGGCATACTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNSHSTCDIKSSSTYMESPDQAR*DWHTRA Trigger: TGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGG...GGATTCCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS CCA 90 bp | GACTACCCTGAAGCTCATAGCCGCCAATACAGGAGAATTCACAGGTaGCTCCATAATTGTCACCATCGCTGGAACACTTCATGTAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: DYPEAHSRQYRRIHR*LHNCHHRWNTSCNH Trigger: ATGGTTACATGAAGTGTTCCAGCGATGGTGACAATTATGGAGCCACCTGTGAATTCTCCTGTATTGGCGGCTATGAGCTTCAGGGTAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGCCAAGCCAGATTGGATaGGCATACTCGGGCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWPSQIG*AYSGRT Trigger: AGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGG...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCCGGACCAAGCCAGATaGGATTGGCATACTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNPDQAR*DWHTRA Trigger: TGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATTCCCCATACTTCACCTaGATGGGAGAGCACCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNSPYFT*MGEHHG Trigger: TCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGA...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS-3UTR CAA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATCCACTCCAGGCCTTGTaGTCCATACATGTGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDPLQAL*SIHVTV Trigger: AACAGTCACATGTATGGACAACAAGGCCTGGAGTGG...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGCTCCTTCTGGAAAATTaGAGCCCGGAGGAAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWLLLEN*SPEEGL Trigger: AAGGCCTTCCTCCGGGCTCAAATTTTCCAGAAGGAG...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGTCTGGGGCATTGAGCTaGCCACAACGTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWSGALS*PQRLTL Trigger: AAGAGTCAGACGTTGTGGCAAGCTCAATGCCCCAGA...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCCAAGCCAGATTGGATaGGCATACTCGGGCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNPSQIG*AYSGRT Trigger: AGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS TCA 90 bp | GTCCATACATGTGACTGTTCGCTCCCCTTTCAATGTATATCCTGGTaGACAATAGTACTCACACCGAGAGTTAAAGTAGGCACCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHTCDCSLPFQCISW*TIVLTPRVKVGTID Trigger: GTCGATGGTGCCTACTTTAACTCTCGGTGTGAGTACTATTGTTCACCAGGATATACATTGAAAGGGGAGCGAACAGTCACATGTATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGTTATCTGACCAGCGCTaGTTTGACTGGCAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWLSDQR*FDWQMS Trigger: GCTCATCTGCCAGTCAAACAAGCGCTGGTCAGATAA...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATGGACATCGCTTCTGTTaGCAGATGACCTTATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDGHRFC*QMTLSD Trigger: GTCAGATAAGGTCATCTGCAAACAGAAGCGATGTCC...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCCATTTTCTGGGGCATaGAGCTTGCCACAACGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNPFSGA*SLPQRL Trigger: CAGACGTTGTGGCAAGCTCAATGCCCCAGAAAATGG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATAAAGTGTCAATGAGGTaGAAGAGAGCCATGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDKVSMR*KRAMGV Trigger: GACACCCATGGCTCTCTTCAACCTCATTGACACTTT...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS TCA 90 bp | GTCATAGACTGTGTACTCAATCTTGTGGTCTCCTTCTGGAAAATTTaGGCCCGGAGGAAGGCCTTTCAGAATAACATCAGTAAGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: VIDCVLNLVVSFWKI*ARRKAFQNNISKNP Trigger: GGGATTCTTACTGATGTTATTCTGAAAGGCCTTCCTCCGGGCTCAAATTTTCCAGAAGGAGACCACAAGATTGAGTACACAGTCTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CCA 90 bp | TCCATAATTGTCACCATCGCTGGAACACTTCATGTAACCATTTTCTaGGGCATTGAGCTTGCCACAACGTCTGACTCTTACTTTAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIIVTIAGTLHVTIF*GIELATTSDSYFNS Trigger: CGAGTTAAAGTAAGAGTCAGACGTTGTGGCAAGCTCAATGCCCCAGAAAATGGTTACATGAAGTGTTCCAGCGATGGTGACAATTATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTCCCCATACTTCACCTaGATGGGAGAGCACCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVSPYFT*MGEHHG Trigger: TCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATTTATCTGACCAGCGCTaGTTTGACTGGCAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNLSDQR*FDWQMS Trigger: GCTCATCTGCCAGTCAAACAAGCGCTGGTCAGATAA...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATCCACTCCAGGCCTTGTaGTCCATACATGTGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNPLQAL*SIHVTV Trigger: AACAGTCACATGTATGGACAACAAGGCCTGGAGTGG...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCGGCCACTCCAGGCCTaGTTGTCCATACATGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVRPLQA*LSIHVT Trigger: AGTCACATGTATGGACAACAAGGCCTGGAGTGGCCG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGGTTCTGACACCAACATaGACATTCATCGCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWVLTPT*TFIAAQ Trigger: CTGTGCAGCGATGAATGTCAATGTTGGTGTCAGAAC...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGCTCCTTCTGGAAAATTaGAGCCCGGAGGAAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVLLLEN*SPEEGL Trigger: AAGGCCTTCCTCCGGGCTCAAATTTTCCAGAAGGAG...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | GAATACAGCCCTACTGGCCCATCATGCTTGTTCATTCACAAACTCAGGAATGATACTGTGTACTCAATCTaGTGGTCTCCTTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EYSPTGPSCLFIHKLRNDTVYSI*WSPSGK Trigger: TTTTCCAGAAGGAGACCACAAGATTGAGTACACAGT...ATCATTCCTGAGTTTGTGAATGAACAAGCATGATGGGCCAGTAGGGCTGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTCTGGGGCATTGAGCTaGCCACAACGTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVSGALS*PQRLTL Trigger: AAGAGTCAGACGTTGTGGCAAGCTCAATGCCCCAGA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATAAAGTGTCAATGAGGTaGAAGAGAGCCATGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNKVSMR*KRAMGV Trigger: GACACCCATGGCTCTCTTCAACCTCATTGACACTTT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATAGAAATATCTGAAAAGGGGTCTGATGTACAACCTCTGAATTGTCACCTCTCTTTCACACTTGGGCACTaGATTCTAGGAGGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IEISEKGSDVQPLNCHLSFTLGH*ILGGSR Trigger: TCTGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAA...AGAGAGGTGACAATTCAGAGGTTGTACATCAGACCCCTTTTCAGATATTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AGGATCCCAACAGTCATTCGACTTGTGATATCAAATCGTCCAGTACTTACATGGACTTTAACTCGAAACTaGCAAGTTCCCTTGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RIPTVIRLVISNRPVLTWTLTRN*QVPLFS Trigger: CGAGAACAAGGGAACTTGCAAGTTTCGAGTTAAAGT...CCATGTAAGTACTGGACGATTTGATATCACAAGTCGAATGACTGTTGGGATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGTTCACACTTGGGCACTaGATTCTAGGAGGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVFTLGH*ILGGSR Trigger: TCTGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAA...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATACTGTGTACTCAATCTaGTGGTCTCCTTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNTVYSI*WSPSGK Trigger: TTTTCCAGAAGGAGACCACAAGATTGAGTACACAGT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGCTGTAGCTTCTAATACTTTAACTCGAAACTaGCAAGTTCCCTTGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: MFHTEEYSECMSVAVASNTLTRN*QVPLFS Trigger: CGAGAACAAGGGAACTTGCAAGTTTCGAGTTAAAGT...ATTAGAAGCTACAGCCACACTCATGCACTCAGAATATTCCTCAGTGTGAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAAGGAAAACATGTTTCACACTGAGGAATATTCTGAGTGCATGAGTGTGGTTCTGACACCAACATaGACATTCATCGCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KKKENMFHTEEYSECMSVVLTPT*TFIAAQ Trigger: CTGTGCAGCGATGAATGTCAATGTTGGTGTCAGAAC...CACACTCATGCACTCAGAATATTCCTCAGTGTGAAACATGTTTTCCTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS TCA 72 bp | AGGACGTGCAGCAGCGCCAGCAACAGCGGCAGTACTTaGGGCAGCAGCAGCTCGGGCCGAAGTCCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RTCSSASNSGST*GSSSSGRSPGL Trigger: GAGCCCGGGACTTCGGCCCGAGCTGCTGCTGCCTCAAGTACTGCCGCTGTTGCTGGCGCTGCTGCACGTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | CAGGACGTGCAGCAGCGCCAGCAACAGCGGCAGTACTaGAGGCAGCAGCAGCTCGGGCCGAAGTCCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QDVQQRQQQRQY*RQQQLGPKSRA Trigger: AGCCCGGGACTTCGGCCCGAGCTGCTGCTGCCTCAAGTACTGCCGCTGTTGCTGGCGCTGCTGCACGTCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | TTGATGGGAGAGCACCACGGAGTGTCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMGEHHGVSGKP*LGRTCSSASNS Trigger: GCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | TCTTCTAGTGGTGAGTCTCCAGATCCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSGESPDPGKP*LGRTCSSASNS Trigger: GCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGGATCTGGAGACTCACCACTAGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS CCA 72 bp | ATGGTAAGGGTAGGACATCGCTTCTCTGGGAAGCCCTaGCTCGGCAGGACGTGCAGCAGCGCCAGCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: MVRVGHRFSGKP*LGRTCSSASNS Trigger: GCTGTTGCTGGCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGAGAAGCGATGTCCTACCCTTACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115543.3 |
||
| CDS CCA 72 bp | ATACTTCACCTTGATGGGAGAGCACCACGGAGTGTCTaGGAAGCCCTGGCTCGGCAGGACGTGCAGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ILHLDGRAPRSV*EALARQDVQQR Trigger: GCGCTGCTGCACGTCCTGCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | TATCCCCCAGGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTaGATGGGAGAGCACCACGGAGTGTCTGGGAAGCCCTGGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPPGGALQYTSPYFT*MGEHHGVSGKPWLG Trigger: GCCGAGCCAGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGGGATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | CTGCACAGCTGGGCTCTGTGCCGGACCAAGCCAGATTaGATTGGCATACTCGGGCAGGACTACCCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHSWALCRTKPD*IGILGQDYPEA Trigger: AGCTTCAGGGTAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | GGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTaGATGGGAGAGCACCACGGAGTGTCTGGGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGALQYTSPYFT*MGEHHGVSGKP Trigger: GGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | CATCGCTGCACAGCTGGGCTCTGTGCCGGACCAAGCCAGATTGGATaGGCATACTCGGGCAGGACTACCCTGAAGCTCATAGCCGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HRCTAGLCAGPSQIG*AYSGRTTLKLIAAN Trigger: ATTGGCGGCTATGAGCTTCAGGGTAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGTGCAGCGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS TCA 72 bp | GAGGTGCCCTGCAGTACACATCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAGTGTCTGGGAAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EVPCSTHPHTSP*WESTTECLGSP Trigger: AGGGCTTCCCAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | ACAGCTGGGCTCTGTGCCGGACCAAGCCAGATTGGATaGGCATACTCGGGCAGGACTACCCTGAAGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: TAGLCAGPSQIG*AYSGRTTLKLI Trigger: TATGAGCTTCAGGGTAGTCCTGCCCGAGTATGCCAATCCAATCTGGCTTGGTCCGGCACAGAGCCCAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | AGATCTACACAGGAGGCTGGTCGGCCACTCCAGGCCTaGTTGTCCATACATGTGACTGTTCGCTCCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSTQEAGRPLQA*LSIHVTVRSPF Trigger: GAAAGGGGAGCGAACAGTCACATGTATGGACAACAAGGCCTGGAGTGGCCGACCAGCCTCCTGTGTAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | CTGGGCTTTCCCAGGACACCCGGACTGTCAGCTTATTaGGCTCAGCTATACGTTCTTTCACACTTGGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LGFPRTPGLSAY*AQLYVLSHLGT Trigger: AGTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAATAAGCTGACAGTCCGGGTGTCCTGGGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | AGGCATAATCTTTGCTCTGATCCTGCCGATGAGAGTTaGGAAGACCCCTACCAGCTCCACCACGGTGACATG | + |
|
Preference number: 6 (lower is better) Translates to: RHNLCSDPADES*EDPYQLHHGDM Trigger: CATGTCACCGTGGTGGAGCTGGTAGGGGTCTTCCCAACTCTCATCGGCAGGATCAGAGCAAAGATTATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | TCTACACAGGAGGCTGGTCGGCCACTCCAGGCCTTGTaGTCCATACATGTGACTGTTCGCTCCCCTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: STQEAGRPLQAL*SIHVTVRSPFN Trigger: ATTGAAAGGGGAGCGAACAGTCACATGTATGGACAACAAGGCCTGGAGTGGCCGACCAGCCTCCTGTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | TCTGGGCTTTCCCAGGACACCCGGACTGTCAGCTTATaGGGCTCAGCTATACGTTCTTTCACACTTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGLSQDTRTVSL*GSAIRSFTLGH Trigger: GTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAATAAGCTGACAGTCCGGGTGTCCTGGGAAAGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CCA 72 bp | GAAGCTCATAGCCCTTTCGGCAGCGAATGTCACATCTaGTTCCCAAGGCTGTTTTGTAGTATCCCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EAHSPFGSECHI*FPRLFCSIPQE Trigger: CTCCTGGGGGATACTACAAAACAGCCTTGGGAACCAGATGTGACATTCGCTGCCGAAAGGGCTATGAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | GGTTCCAGATCTACACAGGAGGCTGGTCGGCCACTCCAGGCCTTGTaGTCCATACATGTGACTGTTCGCTCCCCTTTCAATGTATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSRSTQEAGRPLQAL*SIHVTVRSPFNVYP Trigger: AGGATATACATTGAAAGGGGAGCGAACAGTCACATGTATGGACAACAAGGCCTGGAGTGGCCGACCAGCCTCCTGTGTAGATCTGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | GGAGGTTCCAGATCTACACAGGAGGCTGGTCGGCCACTCCAGGCCTaGTTGTCCATACATGTGACTGTTCGCTCCCCTTTCAATGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSRSTQEAGRPLQA*LSIHVTVRSPFNVY Trigger: ATATACATTGAAAGGGGAGCGAACAGTCACATGTATGGACAACAAGGCCTGGAGTGGCCGACCAGCCTCCTGTGTAGATCTGGAACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | TATCCCCCAGGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTaGATGGGAGAGCACCACGGAGTGTCTTTATATAGAGAGTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YPPGGALQYTSPYFT*MGEHHGVSLYRECE Trigger: TTCACACTCTCTATATAAAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCCTGGGGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS CAA 90 bp | GTCAGCTTATTGGGCTCAGCTATACGTTCTTTCACACTTGGGCACTaGATTCTAGGAGGTTCCAGATCTACACAGGAGGCTGGTCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSLLGSAIRSFTLGH*ILGGSRSTQEAGRP Trigger: TGGCCGACCAGCCTCCTGTGTAGATCTGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAATAAGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 90 bp | TCTCTTCCCTCTGGGCTTTCCCAGGACACCCGGACTGTCAGCTTATaGGGCTCAGCTATACGTTCTTTCACACTTGGGCACTTGATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLPSGLSQDTRTVSL*GSAIRSFTLGHLIL Trigger: TAGAATCAAGTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAATAAGCTGACAGTCCGGGTGTCCTGGGAAAGCCCAGAGGGAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS TCA 72 bp | GAGGTGCCCTGCAGTACACATCCCCATACTTCACCTTaGTGGGAGAGCACCACGGAGTGTCTTTATATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVPCSTHPHTSP*WESTTECLYIE Trigger: CTCTATATAAAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS GCA 72 bp | AAAGTAGGCACCATCGACACACTTAAACCCTCCATTTaGCGGCATGGTAAGGGTAGGACATCGCTTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KVGTIDTLKPSI*RHGKGRTSLLW Trigger: CCAGAGAAGCGATGTCCTACCCTTACCATGCCGGCAAATGGAGGGTTTAAGTGTGTCGATGGTGCCTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115543.3 |
||
| CDS CCA 72 bp | ATCAGTAAGAATCCCATCCGCTGTATCTCTTCCCTCTaGGCTTTCCCAGGACACCCGGACTGTCAGCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: ISKNPIRCISSL*AFPGHPDCQLI Trigger: AATAAGCTGACAGTCCGGGTGTCCTGGGAAAGCCCAGAGGGAAGAGATACAGCGGATGGGATTCTTACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
||
| CDS CAA 72 bp | GGAGGTGCCCTGCAGTACACATCCCCATACTTCACCTaGATGGGAGAGCACCACGGAGTGTCTTTATATAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGALQYTSPYFT*MGEHHGVSLYR Trigger: TCTATATAAAGACACTCCGTGGTGCTCTCCCATCAAGGTGAAGTATGGGGATGTGTACTGCAGGGCACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044789.10 |
||
| CDS GCA 72 bp | AAAGTAGGCACCATCGACACACTTAAACCCTCCATTTaGCGGCATGGTAAGGGTAGGACATCGCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KVGTIDTLKPSI*RHGKGRTSLLF Trigger: AAACAGAAGCGATGTCCTACCCTTACCATGCCGGCAAATGGAGGGTTTAAGTGTGTCGATGGTGCCTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044789.10 ENSMUST00000115544.9 |
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| CDS CCA 72 bp | GTCACCATCGCTGGAACACTTCATGTAACCATTTTCTaGGGCATTGAGCTTGCCACAACGTCTGACTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: VTIAGTLHVTIF*GIELATTSDSY Trigger: GTAAGAGTCAGACGTTGTGGCAAGCTCAATGCCCCAGAAAATGGTTACATGAAGTGTTCCAGCGATGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS CCA 72 bp | GAAGCTCATAGCCGCCAATACAGGAGAATTCACAGGTaGCTCCATAATTGTCACCATCGCTGGAACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: EAHSRQYRRIHR*LHNCHHRWNTS Trigger: TGAAGTGTTCCAGCGATGGTGACAATTATGGAGCCACCTGTGAATTCTCCTGTATTGGCGGCTATGAGCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS CAA 72 bp | TTGGGCTCAGCTATACGTTCTTTCACACTTGGGCACTaGATTCTAGGAGGTTCCAGATCTACACAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LGSAIRSFTLGH*ILGGSRSTQEA Trigger: AGCCTCCTGTGTAGATCTGGAACCTCCTAGAATCAAGTGCCCAAGTGTGAAAGAACGTATAGCTGAGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS TCA 72 bp | TGTGACTGTTCGCTCCCCTTTCAATGTATATCCTGGTaGACAATAGTACTCACACCGAGAGTTAAAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: CDCSLPFQCISW*TIVLTPRVKVG Trigger: GCCTACTTTAACTCTCGGTGTGAGTACTATTGTTCACCAGGATATACATTGAAAGGGGAGCGAACAGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS TCA 72 bp | TGTGTACTCAATCTTGTGGTCTCCTTCTGGAAAATTTaGGCCCGGAGGAAGGCCTTTCAGAATAACATCAGT | + |
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Preference number: 6 (lower is better) Translates to: CVLNLVVSFWKI*ARRKAFQNNIS Trigger: ACTGATGTTATTCTGAAAGGCCTTCCTCCGGGCTCAAATTTTCCAGAAGGAGACCACAAGATTGAGTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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| CDS GCA 72 bp | GAGGAGTCGCCTTTTCTCATAAAACTGATCCAGAAGTaGAGCTGCTGTTCTGACACCAACATTGACATTCAT | + |
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Preference number: 6 (lower is better) Translates to: EESPFLIKLIQK*SCCSDTNIDIH Trigger: ATGAATGTCAATGTTGGTGTCAGAACAGCAGCTGCACTTCTGGATCAGTTTTATGAGAAAAGGCGACTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044789.10 ENSMUST00000115543.3 ENSMUST00000115544.9 |
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