Pregenerated sensors for SRPRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032553Ensembl transcript IDs: ENSMUST00000035157.10, ENSMUST00000190760.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACAGGGGACAGCCTGGGCTCACGCACGCCCGAGGCAGCAGTGTaGTGTCTCCCTGCTCTCCCCAGTGGAGCCTCTAGAACACTAACC | + |
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Preference number: 1 (lower is better) Translates to: STGDSLGSRTPEAAV*CLPALPSGASRTLT Trigger: GGTTAGTGTTCTAGAGGCTCCACTGGGGAGAGCAGGGAGACAGCACACTGCTGCCTCGGGCGTGCGTGAGCCCAGGCTGTCCCCTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 90 bp | CTCCCCTCTGATAGAACAGCTCACGTCAGGAGGTGCTGGAGGCCCTaGGAAGCAGTGGCAGGGGCCAAGGCCTCCCGAGAGACCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: LPSDRTAHVRRCWRP*EAVAGAKASRETTR Trigger: CCTTGTGGTCTCTCGGGAGGCCTTGGCCCCTGCCACTGCTTCCCAGGGCCTCCAGCACCTCCTGACGTGAGCTGTTCTATCAGAGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 90 bp | CCCTCTCACTGGTCCAGGCCAGCCCAGAGCGCCACACATATTCCCTaGGCACTGCACCTGAGTCAATGCTCTGCCTGTCTCTTTAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PSHWSRPAQSATHIP*ALHLSQCSACLFSV Trigger: CACACTAAAGAGACAGGCAGAGCATTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCAGTGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 90 bp | CAGCAAAGCCAGACCCATGCGTTCCAGGTAGGCATTCTACTAACCTaGTTCCCAGCCCTGCACAGCTTACCTTTTGCTCAGGACACAGGC | + |
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Preference number: 1 (lower is better) Translates to: QQSQTHAFQVGILLT*FPALHSLPFAQDTG Trigger: GCCTGTGTCCTGAGCAAAAGGTAAGCTGTGCAGGGCTGGGAACCAGGTTAGTAGAATGCCTACCTGGAACGCATGGGTCTGGCTTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 90 bp | ACCAGGGGCAACTGCAAGTTCACTTATTCCACAAGCAGGCAGATCTaGTCCCAGGAAAAGGGACCAACACAGAGGCAGGAGACAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: TRGNCKFTYSTSRQI*SQEKGPTQRQETRT Trigger: AGTCCTTGTCTCCTGCCTCTGTGTTGGTCCCTTTTCCTGGGACCAGATCTGCCTGCTTGTGGAATAAGTGAACTTGCAGTTGCCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 90 bp | AGGAAAAGGGACCAACACAGAGGCAGGAGACAAGGACTTCTCAGATaGGACCCTACTCTCAAAGCGATGCCCTCTCTGTTATGTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: RKRDQHRGRRQGLLR*DPTLKAMPSLLCLT Trigger: TGTGAGACATAACAGAGAGGGCATCGCTTTGAGAGTAGGGTCGCATCTGAGAAGTCCTTGTCTCCTGCCTCTGTGTTGGTCCCTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 90 bp | TGCCTCCCAGTGAGAACTGAGTCATCTCATGGCTTATCTGTCCTGTaGTGTGCTGTATCTGTCTCATACACCATAAGCAAGGCCAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: CLPVRTESSHGLSVL*CAVSVSYTISKASR Trigger: TCTACTGGCCTTGCTTATGGTGTATGAGACAGATACAGCACAGCACAGGACAGATAAGCCATGAGATGACTCAGTTCTCACTGGGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 90 bp | GGGTGGTACAATTGTTTCAAGAACTCAAGAAATGCTTCAACGACATaGCCCCTCTTTATCAGTCCACACCACCACCGCCCTTTCTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: GWYNCFKNSRNASTT*PLFISPHHHRPFSN Trigger: GTTTGAGAAAGGGCGGTGGTGGTGTGGACTGATAAAGAGGGGGCATGTCGTTGAAGCATTTCTTGAGTTCTTGAAACAATTGTACCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CAA 90 bp | AGCCCAGGTGACCCACAGGGAGGCCATGTGTCAGCAGGCAGAGGCTaGGGCTGGTCTGCACAGAGAACACCTGTGTGTTTATCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPGDPQGGHVSAGRG*GWSAQRTPVCLSCP Trigger: GGGACAGGATAAACACACAGGTGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTGTGGGTCACCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCACTGGTCCAGGCCAGCCCAGAGCGCCACACATATTCCCTGAGCACTGCACAAGCAGGCAGATCTaGTCCCAGGAAAAGGGACCA | + |
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Preference number: 2 (lower is better) Translates to: PLTGPGQPRAPHIFPEHCTSRQI*SQEKGP Trigger: TGGTCCCTTTTCCTGGGACCAGATCTGCCTGCTTGT...GCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCAGTGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGTAGGCACTGTCAGCTAGGGTaGTGTGGGATGGTCACCGAG | + |
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Preference number: 2 (lower is better) Translates to: SWLLQQPTAKPDPCVPGRHCQLG*CGMVTE Trigger: CTCGGTGACCATCCCACACCACCCTAGCTGACAGTG...CCTACCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGGGGATTTGGCTCCTAGAGCCACCTTGTGAGGGTGACTCTTCGGGGTTGTGGTCACCGAGCCTGTaGAGGACACACTGTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: CLGIWLLEPPCEGDSSGLWSPSL*RTHCQL Trigger: TAGCTGACAGTGTGTCCTTCACAGGCTCGGTGACCA...CAACCCCGAAGAGTCACCCTCACAAGGTGGCTCTAGGAGCCAAATCCCCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGTAGGGCCACACATATTCCCTaGGCACTGCACCTGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SWLLQQPTAKPDPCVPGRATHIP*ALHLSQ Trigger: TTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGC...CCTACCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGCACTGTCAGCTAGGGTaGTGTGGGATGGTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LELAFTAAHSKARPMRSRHCQLG*CGMVTE Trigger: CTCAGTGACCATCCCACACCACCCTAGCTGACAGTG...CCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGCACCTAGCAGTGAGAAGCTGCTTCTGCCGTGGCTCCATGGAAGAGTCCAGAATACTGCCTCCCAGTaGGAACTGAGTCATCTCATG | + |
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Preference number: 2 (lower is better) Translates to: KAPSSEKLLLPWLHGRVQNTASQ*ELSHLM Trigger: CATGAGATGACTCAGTTCTCACTGGGAGGCAGTATT...CTGGACTCTTCCATGGAGCCACGGCAGAAGCAGCTTCTCACTGCTAGGTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGAGCGCCACACATATTCCCTGAGCACTGCACCTGAGTCAATGCTCTGCCAAGAACTCAAGAAATaGTTCAACGACATGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SPERHTYSLSTAPESMLCQELKK*FNDMPP Trigger: AGGGGGCATGTCGTTGAAGCATTTCTTGAGTTCTTG...GCAGAGCATTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGTAGGGACTCCACTAAGAACTaGCACTGTATTATGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: SWLLQQPTAKPDPCVPGRDSTKN*HCIMPT Trigger: TGTAGGCATAATACAGTGTCAGTTCTTAGTGGAGTC...CCTACCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCGTGGCTCCATGGAAGAGTCCAGACATAGAATCTTTGCTGCGGCTGCCTATCTGTCCTGTGCTGTaGTGTATCTGTCTCATACAC | + |
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Preference number: 2 (lower is better) Translates to: SAVAPWKSPDIESLLRLPICPVL*CICLIH Trigger: GTGTATGAGACAGATACAGCACAGCACAGGACAGAT...AGGCAGCCGCAGCAAAGATTCTATGTCTGGACTCTTCCATGGAGCCACGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGCACCTAGCAGTGAGAAGCTGCTTCTGCCGTGGCTCCATGGAAGAGTCCAGAAAATCACTTTATTATaGAGACAAAAGGGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KAPSSEKLLLPWLHGRVQKITLL*RQKGGQ Trigger: CTGGCCTCCCTTTTGTCTGCATAATAAAGTGATTTT...CTGGACTCTTCCATGGAGCCACGGCAGAAGCAGCTTCTCACTGCTAGGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR CCA 90 bp | TTATTATGCAGACAAAAGGGAGGCCAGCGAACACATTTTCTAACTGAAAGGTTTTCCTGTCCCTCTCACTaGTCCAGGCCAGCCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLCRQKGGQRTHFLTERFSCPSH*SRPAQS Trigger: GCTCTGGGCTGGCCTGGACCAGTGAGAGGGACAGGA...AAACCTTTCAGTTAGAAAATGTGTTCGCTGGCCTCCCTTTTGTCTGCATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCTGTGCTGTGCTGTATCTGTCTCATACACCATAAGCAAGGCCAGTAGATCAGTAACCTGGAGCTaGGGTTCAATTCTAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SVLCCAVSVSYTISKASRSVTWS*GSILAQ Trigger: CTGAGCTAGAATTGAACCCCAGCTCCAGGTTACTGA...TCTACTGGCCTTGCTTATGGTGTATGAGACAGATACAGCACAGCACAGGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR-3UTR TCA 90 bp | TTATTATGCAGACAAAAGGGAGGCCAGCGAACACATTTTCTAACTGAAAGGTTTGATGAGCACCTACTGTaGTGTGAACGTCCTTCATCG | + |
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Preference number: 2 (lower is better) Translates to: LLCRQKGGQRTHFLTERFDEHLL*CERPSS Trigger: CGATGAAGGACGTTCACATCACAGTAGGTGCTCATC...AAACCTTTCAGTTAGAAAATGTGTTCGCTGGCCTCCCTTTTGTCTGCATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CAA 90 bp | AATAAATATGTATTTAAAATGCACAGTGGACATCTTCAGTTTGTATaGTTCCATAGCACTCTAGCTGGGGTGACACAACAGGAGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: NKYVFKMHSGHLQFV*FHSTLAGVTQQELI Trigger: GATCAGCTCCTGTTGTGTCACCCCAGCTAGAGTGCTATGGAACAATACAAACTGAAGATGTCCACTGTGCATTTTAAATACATATTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | GATAGAACAGCTCACGTCAGGAGGTGCTGGAGGCCCTaGGAAGCAGTGGCAGGGGCCAAGGCCTCCCGAGAG | + |
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Preference number: 3 (lower is better) Translates to: DRTAHVRRCWRP*EAVAGAKASRE Trigger: CTCTCGGGAGGCCTTGGCCCCTGCCACTGCTTCCCAGGGCCTCCAGCACCTCCTGACGTGAGCTGTTCTATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | TGGTCCAGGCCAGCCCAGAGCGCCACACATATTCCCTaGGCACTGCACCTGAGTCAATGCTCTGCCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WSRPAQSATHIP*ALHLSQCSACL Trigger: GAGACAGGCAGAGCATTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | GACACACTGTCAGCTAGGGTGGTGTGGGATGGTCACTaGGCCCGTGAAGGACACACTGTCAGCTGTGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: DTLSARVVWDGH*AREGHTVSCAC Trigger: ACAGGCACAGCTGACAGTGTGTCCTTCACGGGCTCAGTGACCATCCCACACCACCCTAGCTGACAGTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | GGGAATCATGGTCTGGGACTCTATTATCAGCCCAGGTaGCCCACAGGGAGGCCATGTGTCAGCAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GNHGLGLYYQPR*PTGRPCVSRQR Trigger: CCTCTGCCTGCTGACACATGGCCTCCCTGTGGGTCACCTGGGCTGATAATAGAGTCCCAGACCATGATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | CAGAGAACACCTGTGTGTTTATCCTGTCCCTCTCACTaGTCCAGGCCAGCCCAGAGCGCCACACATATTCCC | + |
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Preference number: 3 (lower is better) Translates to: QRTPVCLSCPSH*SRPAQSATHIP Trigger: GGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCAGTGAGAGGGACAGGATAAACACACAGGTGTTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | CAGGGAGGCCATGTGTCAGCAGGCAGAGGCTTGGGCTaGTCTGCACAGAGAACACCTGTGTGTTTATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: QGGHVSAGRGLG*SAQRTPVCLSC Trigger: ACAGGATAAACACACAGGTGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | ACCCACAGGGAGGCCATGTGTCAGCAGGCAGAGGCTTaGGCTGGTCTGCACAGAGAACACCTGTGTGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: THREAMCQQAEA*AGLHREHLCVY Trigger: ATAAACACACAGGTGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | CCCAGAGCGCCACACATATTCCCTGAGCACTGCACCTaGGTCAATGCTCTGCCTGTCTCTTTAGTGTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PRAPHIFPEHCT*VNALPVSLVWL Trigger: AAGCCACACTAAAGAGACAGGCAGAGCATTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGCGCTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 72 bp | TGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATaGGTTCCAGGTAGGCATTCTACTAACCTGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: WLLQQPTAKPDP*VPGRHSTNLVP Trigger: GGGAACCAGGTTAGTAGAATGCCTACCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | GAGTGGGGAGCTGAGTACTTGATGGGAATCATGGTCTaGGACTCTATTATCAGCCCAGGTGACCCACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: EWGAEYLMGIMV*DSIISPGDPQG Trigger: TCCCTGTGGGTCACCTGGGCTGATAATAGAGTCCCAGACCATGATTCCCATCAAGTACTCAGCTCCCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | CAGACCCATGCGTTCCAGGTAGGCATTCTACTAACCTaGTTCCCAGCCCTGCACAGCTTACCTTTTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QTHAFQVGILLT*FPALHSLPFAQ Trigger: CTGAGCAAAAGGTAAGCTGTGCAGGGCTGGGAACCAGGTTAGTAGAATGCCTACCTGGAACGCATGGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 72 bp | GACCAACACAGAGGCAGGAGACAAGGACTTCTCAGATaGGACCCTACTCTCAAAGCGATGCCCTCTCTGTTA | + |
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Preference number: 3 (lower is better) Translates to: DQHRGRRQGLLR*DPTLKAMPSLL Trigger: TAACAGAGAGGGCATCGCTTTGAGAGTAGGGTCGCATCTGAGAAGTCCTTGTCTCCTGCCTCTGTGTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 72 bp | TTTATTGTGCCTGAAATAGCTCAATGGCTGGGCCACTaGCTCCCCTCCCCTCTGATAGAACAGCTCACGTCA | + |
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Preference number: 3 (lower is better) Translates to: FIVPEIAQWLGH*LPSPLIEQLTS Trigger: TGACGTGAGCTGTTCTATCAGAGGGGAGGGGAGGCAGTGGCCCAGCCATTGAGCTATTTCAGGCACAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CCA 72 bp | AACTGCAAGTTCACTTATTCCACAAGCAGGCAGATCTaGTCCCAGGAAAAGGGACCAACACAGAGGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NCKFTYSTSRQI*SQEKGPTQRQE Trigger: CTCCTGCCTCTGTGTTGGTCCCTTTTCCTGGGACCAGATCTGCCTGCTTGTGGAATAAGTGAACTTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | ACTGTAGACCTTCACACCCCAGACTCCACTAAGAACTaGCACTGTATTATGCCTACACCAGGGGCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: TVDLHTPDSTKN*HCIMPTPGATA Trigger: TGCAGTTGCCCCTGGTGTAGGCATAATACAGTGTCAGTTCTTAGTGGAGTCTGGGGTGTGAAGGTCTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR TCA 72 bp | GGCAGTAAGAATCCTAGCAGCAATACTGCCTCCCAGTaGGAACTGAGTCATCTCATGGCTTATCTGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GSKNPSSNTASQ*ELSHLMAYLSC Trigger: ACAGGACAGATAAGCCATGAGATGACTCAGTTCTCACTGGGAGGCAGTATTGCTGCTAGGATTCTTACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 72 bp | GTGAGAACTGAGTCATCTCATGGCTTATCTGTCCTGTaGTGTGCTGTATCTGTCTCATACACCATAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: VRTESSHGLSVL*CAVSVSYTISK Trigger: CTTGCTTATGGTGTATGAGACAGATACAGCACAGCACAGGACAGATAAGCCATGAGATGACTCAGTTCTCAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR GCA 72 bp | GCTCAGGTTCCCACTTGTACTCATCATTTGACTCAATaGTTTCAGTATAGTCATTTATCAAGATACCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: AQVPTCTHHLTQ*FQYSHLSRYQS Trigger: TGACTGGTATCTTGATAAATGACTATACTGAAAGCATTGAGTCAAATGATGAGTACAAGTGGGAACCTGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | ACACTGTCAGCTAGGGTGGTGTGGGATGGTCACCGAGCCCGTGAAGGACACACTTGGAACTGTCCAGTGTaGTGGGAGCCGCGGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: TLSARVVWDGHRAREGHTWNCPV*WEPRTG Trigger: CCCGGTCCGCGGCTCCCAGCACACTGGACAGTTCCA...AGTGTGTCCTTCACGGGCTCGGTGACCATCCCACACCACCCTAGCTGACAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCACTGGTCCAGGCCAGCCCAGAGCGCCACACATATTCCCTGAGCACTGCGAGCAGGTGCGGTGCTaGAACTGTCCAGTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLTGPGQPRAPHIFPEHCEQVRC*NCPVCW Trigger: CCAGCACACTGGACAGTTCCAGCACCGCACCTGCTC...GCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCAGTGAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGCCATGTGTCAGCAGGCAGAGGCTTGGGCTGGTCTGCACAGAGAACACCCCAACTGAGCAGGTaGGGTGCTGGAACTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGGHVSAGRGLGWSAQRTPQLSR*GAGTVQ Trigger: CTGGACAGTTCCAGCACCGCACCTGCTCAGTTGGGG...TGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR TCA 90 bp | CAGGGAGGCCATGTGTCAGCAGGCAGAGGCTTGGGCTGGTCTGCACAGAGAACACCTTTCTTCCCCAACTaGGCAGGTGCGGTGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QGGHVSAGRGLGWSAQRTPFFPN*AGAVLE Trigger: TTCCAGCACCGCACCTGCTCAGTTGGGGAAGAAAGG...TGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | TCCACACCACCACCGCCCTTTCTCAAACTGCAGGGTCAGTCTCACATGACCAACACTGAGCAGGTGCGGTaGTGGAACTGTCCAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFLKLQGQSHMTNTEQVR*WNCPVC Trigger: GCACACTGGACAGTTCCAGCACCGCACCTGCTCAGT...GTTGGTCATGTGAGACTGACCCTGCAGTTTGAGAAAGGGCGGTGGTGGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR TCA 90 bp | ACACACTGTCAGCTAGGGTGGTGTGGGATGGTCACTGAGCCCGTGAAGGACACAAAGAGAACAGCTCTCTaGCTGCTCTTTCGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: THCQLGWCGMVTEPVKDTKRTAL*LLFRLQ Trigger: CTGGAGCCGAAAGAGCAGTCAGAGAGCTGTTCTCTT...TGTGTCCTTCACGGGCTCAGTGACCATCCCACACCACCCTAGCTGACAGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | AGCCCAGAGCGCCACACATATTCCCTGAGCACTGCACCTGAGTCAATGCTCTGCCACTTCTCCAAGTCCTaGATGTCAGCAGAGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SPERHTYSLSTAPESMLCHFSKS*MSAEPV Trigger: CACTGGCTCTGCTGACATCCAGGACTTGGAGAAGTG...GCAGAGCATTGACTCAGGTGCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | TATGCCTACACCAGGGGCAACTGCAAGTTCACTTATTCCACAAGCAGGCAGATCTCTTTCACCTCCCGCTaGAACGCCGCACTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YAYTRGNCKFTYSTSRQISFTSR*NAALST Trigger: GGTGGACAGTGCGGCGTTCCAGCGGGAGGTGAAAGA...GATCTGCCTGCTTGTGGAATAAGTGAACTTGCAGTTGCCCCTGGTGTAGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | TTAGAGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGAGCTCCTTCTCAAGCTaGTGCTGGATCAACTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LELAFTAAHSKARPMRSRSSFSS*CWINFA Trigger: AGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCT...CCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR TCA 90 bp | ACACACTGTCAGCTAGGGTGGTGTGGGATGGTCACTGAGCCCGTGAAGGACACACTGGATCAACTTCGCTaGTTTTGCCATTGCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: THCQLGWCGMVTEPVKDTLDQLR*FCHCDI Trigger: GATATCGCAATGGCAAAATCAGCGAAGTTGATCCAG...TGTGTCCTTCACGGGCTCAGTGACCATCCCACACCACCCTAGCTGACAGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | ACCTGGAGCTGGGGTTCAATTCTAGCTCAGGTTCCCACTTGTACTCATCATTTGCCCCTCGTCCACCCTTaGCACTACACTCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TWSWGSILAQVPTCTHHLPLVHP*HYTPGT Trigger: AGTTCCTGGAGTGTAGTGCCAAGGGTGGACGAGGGG...CAAATGATGAGTACAAGTGGGAACCTGAGCTAGAATTGAACCCCAGCTCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGCCATGTGTCAGCAGGCAGAGGCTTGGGCTGGTCTGCACAGAGAACACGATATCTTGCTTATTaGAGGCTATTAATAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QGGHVSAGRGLGWSAQRTRYLAY*RLLIRT Trigger: CGTCCTTATTAATAGCCTGCAATAAGCAAGATATCG...TGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | GAGGCCATGTGTCAGCAGGCAGAGGCTTGGGCTGGTCTGCACAGAGAACACCTGGCCATTGCGATATCTTaGTTATTGCAGGCTATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EAMCQQAEAWAGLHREHLAIAIS*LLQAIN Trigger: ATTAATAGCCTGCAATAAGCAAGATATCGCAATGGC...CAGGTGTTCTCTGTGCAGACCAGCCCAAGCCTCTGCCTGCTGACACATGGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | CCTCTCACTGGTCCAGGCCAGCCCAGAGCGCCACACATATTCCCTGAGCACTGCACTTTGAGTGGCAACTaGGAAAATTCAAATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTGPGQPRAPHIFPEHCTLSGN*ENSNSL Trigger: CAAAGAATTTGAATTTTCCCAGTTGCCACTCAAAGT...GCAGTGCTCAGGGAATATGTGTGGCGCTCTGGGCTGGCCTGGACCAGTGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGTAGGTACCCCTGTTATTGTTaGCTTTGTATATGGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLLQQPTAKPDPCVPGRYPCYC*LCIWQN Trigger: GTTCTGCCATATACAAAGTCAACAATAACAGGGGTA...CCTACCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | TTAGAGCTGGCTTTTACAGCAGCCCACAGCAAAGCCAGACCCATGCGTTCCAGGTTCTCAAGCTGCTGCTaGATCAACTTCGCTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LELAFTAAHSKARPMRSRFSSCC*INFADF Trigger: AAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAA...CCTGGAACGCATGGGTCTGGCTTTGCTGTGGGCTGCTGTAAAAGCCAGCTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CCA 90 bp | CTGAGTCATCTCATGGCTTATCTGTCCTGTGCTGTGCTGTATCTGTCTCATACAGAACTCCACTTTGAGTaGCAACTGGGAAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLMAYLSCAVLYLSHTELHFE*QLGKFK Trigger: TTTGAATTTTCCCAGTTGCCACTCAAAGTGGAGTTC...TGTATGAGACAGATACAGCACAGCACAGGACAGATAAGCCATGAGATGACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR TCA 90 bp | TTATTATGCAGACAAAAGGGAGGCCAGCGAACACATTTTCTAACTGAAAGGTTTCCAGGAACTCCACTTTaGGTGGCAACTGGGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRQKGGQRTHFLTERFPGTPL*VATGKI Trigger: AATTTTCCCAGTTGCCACTCAAAGTGGAGTTCCTGG...AAACCTTTCAGTTAGAAAATGTGTTCGCTGGCCTCCCTTTTGTCTGCATAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR GCA 90 bp | CTGAGTCAATGCTCTGCCTGTCTCTTTAGTGTGGCTTTAGTGAAGCCTGACTCTAAAATTCAAATTCTTTaGCTTTCTTCCCCAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQCSACLFSVALVKPDSKIQIL*LSSPTE Trigger: CTCAGTTGGGGAAGAAAGGCAAAGAATTTGAATTTT...AGAGTCAGGCTTCACTAAAGCCACACTAAAGAGACAGGCAGAGCATTGACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CAA 72 bp | GTATTTAAAATGCACAGTGGACATCTTCAGTTTGTATaGTTCCATAGCACTCTAGCTGGGGTGACACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFKMHSGHLQFV*FHSTLAGVTQQ Trigger: CTGTTGTGTCACCCCAGCTAGAGTGCTATGGAACAATACAAACTGAAGATGTCCACTGTGCATTTTAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| 3UTR CAA 72 bp | TCAATTCTAGCTCAGGTTCCCACTTGTACTCATCATTaGACTCAATGCTTTCAGTATAGTCATTTATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SILAQVPTCTHH*TQCFQYSHLSR Trigger: TCTTGATAAATGACTATACTGAAAGCATTGAGTCAAATGATGAGTACAAGTGGGAACCTGAGCTAGAATTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CCA 90 bp | ATGAGGACCTGGTACAGAAATTCGGCCACATCTTTCACCTCCCGCTaGAACGCCGCACTGTCCACCACAAACACCACAGCCCTAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MRTWYRNSATSFTSR*NAALSTTNTTALAE Trigger: TTCAGCTAGGGCTGTGGTGTTTGTGGTGGACAGTGCGGCGTTCCAGCGGGAGGTGAAAGATGTGGCCGAATTTCTGTACCAGGTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS TCA 90 bp | AGTGGCAACTGGGAAAATTCAAATTCTTTGCCTTTCTTCCCCAACTaGGCAGGTGCGGTGCTGGAACTGTCCAGTGTGCTGGGAGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGNWENSNSLPFFPN*AGAVLELSSVLGAA Trigger: CGCGGCTCCCAGCACACTGGACAGTTCCAGCACCGCACCTGCTCAGTTGGGGAAGAAAGGCAAAGAATTTGAATTTTCCCAGTTGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS GCA 90 bp | GCCGCGGACCGGGTGACTCGTAAGGTGTTGAGCTCCTTCTCAAGCTaGTGCTGGATCAACTTCGCTGATTTTGCCATTGCGATATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AADRVTRKVLSSFSS*CWINFADFAIAISC Trigger: GCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCGGTCCGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CAA 90 bp | ACACTGTCAGCTAGGGTGGTGTGGGATGGTCACCGAGCCCGTGAAGGACACACTTCCAGGAACTCCACTTaGAGTGGCAACTGGGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSARVVWDGHRAREGHTSRNST*SGNWEN Trigger: ATTTTCCCAGTTGCCACTCAAAGTGGAGTTCCTGGA...AGTGTGTCCTTCACGGGCTCGGTGACCATCCCACACCACCCTAGCTGACAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CCA 90 bp | AATAAGGACGGTGAGTTCTTCAGAGCCATGCTGTCGATGAGGACCTaGTACAGAAATTCGGCCACATCTTTCACCTCCCGCTGGAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKDGEFFRAMLSMRT*YRNSATSFTSRWNA Trigger: GGCGTTCCAGCGGGAGGTGAAAGATGTGGCCGAATTTCTGTACCAGGTCCTCATCGACAGCATGGCTCTGAAGAACTCACCGTCCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCTGTGCTGTGCTGTATCTGTCTCATACACCATAAGCAAGGCCAGTAGATCCCCTCGTCCACCCTaGGCACTACACTCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLCCAVSVSYTISKASRSPRPP*ALHSRN Trigger: GTTCCTGGAGTGTAGTGCCAAGGGTGGACGAGGGGA...TCTACTGGCCTTGCTTATGGTGTATGAGACAGATACAGCACAGCACAGGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS TCA 90 bp | ACAAACACCACAGCCCTAGCTGAAGACTTAAAGCGATCTAAGAGCTaGAACCTCAAGCTCTCATGCCCGGGGAGGTCGATCAGAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNTTALAEDLKRSKS*NLKLSCPGRSIRVR Trigger: CCTGACTCTGATCGACCTCCCCGGGCATGAGAGCTTGAGGTTTCAGCTCTTAGATCGCTTTAAGTCTTCAGCTAGGGCTGTGGTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS GCA 90 bp | GCGGACCGGGTGACTCGTAAGGTGTTGAGCTCCTTCTCAAGCTGCTaGTGGATCAACTTCGCTGATTTTGCCATTGCGATATCTTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ADRVTRKVLSSFSSC*WINFADFAIAISCL Trigger: TAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCGGTCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS TCA 90 bp | AGGCTATTAATAAGGACGGTGAGTTCTTCAGAGCCATGCTGTCGATaGGGACCTGGTACAGAAATTCGGCCACATCTTTCACCTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLIRTVSSSEPCCR*GPGTEIRPHLSPPA Trigger: AGCGGGAGGTGAAAGATGTGGCCGAATTTCTGTACCAGGTCCTCATCGACAGCATGGCTCTGAAGAACTCACCGTCCTTATTAATAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CCA 90 bp | GACCGGGTGACTCGTAAGGTGTTGAGCTCCTTCTCAAGCTGCTGCTaGATCAACTTCGCTGATTTTGCCATTGCGATATCTTGCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: DRVTRKVLSSFSSCC*INFADFAIAISCLL Trigger: CAATAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CAA 90 bp | AAGGCACCTAGCAGTGAGAAGCTGCTTCTGCCGTGGCTCCATGGAAGAGTCCAGTTACCCCTGTTATTGTaGACTTTGTATATGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KAPSSEKLLLPWLHGRVQLPLLL*TLYMAE Trigger: TTCTGCCATATACAAAGTCAACAATAACAGGGGTAA...CTGGACTCTTCCATGGAGCCACGGCAGAAGCAGCTTCTCACTGCTAGGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CCA 90 bp | TATATGGCAGAACTATCGGTAATGGAAGTCTGTGTGTCTCTGTACTaGCCAGTTAGCAACCTGACAAACAGCAACGTTTTCCCAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YMAELSVMEVCVSLY*PVSNLTNSNVFPES Trigger: TGACTCTGGGAAAACGTTGCTGTTTGTCAGGTTGCTAACTGGCCAGTACAGAGACACACAGACTTCCATTACCGATAGTTCTGCCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS-3UTR CAA 90 bp | TCTGTCCTGTGCTGTGCTGTATCTGTCTCATACACCATAAGCAAGGCCAGTAGATCGCTGATTTTGCCATaGCGATATCTTGCTTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLCCAVSVSYTISKASRSLILP*RYLAYC Trigger: GCAATAAGCAAGATATCGCAATGGCAAAATCAGCGA...TCTACTGGCCTTGCTTATGGTGTATGAGACAGATACAGCACAGCACAGGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CCA 72 bp | CTTTGCCTTTCTTCCCCAACTGAGCAGGTGCGGTGCTaGAACTGTCCAGTGTGCTGGGAGCCGCGGACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLSSPTEQVRC*NCPVCWEPRTG Trigger: CCCGGTCCGCGGCTCCCAGCACACTGGACAGTTCCAGCACCGCACCTGCTCAGTTGGGGAAGAAAGGCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CAA 72 bp | GTGCTGGGAGCCGCGGACCGGGTGACTCGTAAGGTGTaGAGCTCCTTCTCAAGCTGCTGCTGGATCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLGAADRVTRKV*SSFSSCCWINF Trigger: GAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCGGTCCGCGGCTCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 90 bp | CTGTCCAGTGTGCTGGGAGCCGCGGACCGGGTGACTCGTAAGGTGTaGAGCTCCTTCTCAAGCTGCTGCTGGATCAACTTCGCTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSSVLGAADRVTRKV*SSFSSCCWINFADF Trigger: AAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCGGTCCGCGGCTCCCAGCACACTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CCA 72 bp | TGGTACAGAAATTCGGCCACATCTTTCACCTCCCGCTaGAACGCCGCACTGTCCACCACAAACACCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WYRNSATSFTSR*NAALSTTNTTA Trigger: GGCTGTGGTGTTTGTGGTGGACAGTGCGGCGTTCCAGCGGGAGGTGAAAGATGTGGCCGAATTTCTGTACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS CCA 72 bp | GGTGAGTTCTTCAGAGCCATGCTGTCGATGAGGACCTaGTACAGAAATTCGGCCACATCTTTCACCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GEFFRAMLSMRT*YRNSATSFTSR Trigger: GCGGGAGGTGAAAGATGTGGCCGAATTTCTGTACCAGGTCCTCATCGACAGCATGGCTCTGAAGAACTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS TCA 72 bp | ACAGCCCTAGCTGAAGACTTAAAGCGATCTAAGAGCTaGAACCTCAAGCTCTCATGCCCGGGGAGGTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: TALAEDLKRSKS*NLKLSCPGRSI Trigger: GATCGACCTCCCCGGGCATGAGAGCTTGAGGTTTCAGCTCTTAGATCGCTTTAAGTCTTCAGCTAGGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS GCA 72 bp | CGGGTGACTCGTAAGGTGTTGAGCTCCTTCTCAAGCTaGTGCTGGATCAACTTCGCTGATTTTGCCATTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVTRKVLSSFSS*CWINFADFAIA Trigger: CGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 90 bp | TGCCCGGGGAGGTCGATCAGAGTCAGGCTGTTACCCCTGTTATTGTaGACTTTGTATATGGCAGAACTATCGGTAATGGAAGTCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPGRSIRVRLLPLLL*TLYMAELSVMEVCV Trigger: CACACAGACTTCCATTACCGATAGTTCTGCCATATACAAAGTCAACAATAACAGGGGTAACAGCCTGACTCTGATCGACCTCCCCGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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| CDS TCA 72 bp | ATAAGGACGGTGAGTTCTTCAGAGCCATGCTGTCGATaGGGACCTGGTACAGAAATTCGGCCACATCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: IRTVSSSEPCCR*GPGTEIRPHLS Trigger: TGAAAGATGTGGCCGAATTTCTGTACCAGGTCCTCATCGACAGCATGGCTCTGAAGAACTCACCGTCCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035157.10 ENSMUST00000190760.2 |
||
| CDS TCA 72 bp | GAGCTCCTTCTCAAGCTGCTGCTGGATCAACTTCGCTaGTTTTGCCATTGCGATATCTTGCTTATTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELLLKLLLDQLR*FCHCDILLIAG Trigger: GCCTGCAATAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS TCA 72 bp | CAGCTCCTTCTCAAGCTGCTGCTGGATCAACTTCGCTaGTTTTGCCATTGCGATATCTTGCTTATTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLLKLLLDQLR*FCHCDILLIAG Trigger: GCCTGCAATAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190760.2 |
||
| CDS GCA 72 bp | GTGACTCGTAAGGTGTTGAGCTCCTTCTCAAGCTGCTaGTGGATCAACTTCGCTGATTTTGCCATTGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: VTRKVLSSFSSC*WINFADFAIAI Trigger: TATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTCAACACCTTACGAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 90 bp | GGGAGGTCGATCAGAGTCAGGCTGTTACCCCTGTTATTGTTGACTTaGTATATGGCAGAACTATCGGTAATGGAAGTCTGTGTGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRSIRVRLLPLLLLT*YMAELSVMEVCVSL Trigger: CAGAGACACACAGACTTCCATTACCGATAGTTCTGCCATATACAAAGTCAACAATAACAGGGGTAACAGCCTGACTCTGATCGACCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS TCA 72 bp | GTCCACCCTTGGCACTACACTCCAGGAACTCCACTTTaGGTGGCAACTGGGAAAATTCAAATTCTTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VHPWHYTPGTPL*VATGKIQILCL Trigger: AAGGCAAAGAATTTGAATTTTCCCAGTTGCCACTCAAAGTGGAGTTCCTGGAGTGTAGTGCCAAGGGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 90 bp | AGCTCAGCTCCTTCTCAAGCTGCTGCTGGATCAACTTCGCTGATTTaGCCATTGCGATATCTTGCTTATTGCAGGCTATTAATAAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SSAPSQAAAGSTSLI*PLRYLAYCRLLIRT Trigger: CGTCCTTATTAATAGCCTGCAATAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGGAGCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190760.2 |
||
| CDS CCA 72 bp | GAACTATCGGTAATGGAAGTCTGTGTGTCTCTGTACTaGCCAGTTAGCAACCTGACAAACAGCAACGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELSVMEVCVSLY*PVSNLTNSNVF Trigger: GAAAACGTTGCTGTTTGTCAGGTTGCTAACTGGCCAGTACAGAGACACACAGACTTCCATTACCGATAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 72 bp | CCTTCTCAAGCTGCTGCTGGATCAACTTCGCTGATTTaGCCATTGCGATATCTTGCTTATTGCAGGCTATTA | + |
|
Preference number: 6 (lower is better) Translates to: PSQAAAGSTSLI*PLRYLAYCRLL Trigger: TAATAGCCTGCAATAAGCAAGATATCGCAATGGCAAAATCAGCGAAGTTGATCCAGCAGCAGCTTGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035157.10 ENSMUST00000190760.2 |
||
| CDS CAA 72 bp | AGGTCGATCAGAGTCAGGCTGTTACCCCTGTTATTGTaGACTTTGTATATGGCAGAACTATCGGTAATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSIRVRLLPLLL*TLYMAELSVME Trigger: TTCCATTACCGATAGTTCTGCCATATACAAAGTCAACAATAACAGGGGTAACAGCCTGACTCTGATCGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
||
| CDS CAA 72 bp | ATCAGAGTCAGGCTGTTACCCCTGTTATTGTTGACTTaGTATATGGCAGAACTATCGGTAATGGAAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IRVRLLPLLLLT*YMAELSVMEVC Trigger: ACAGACTTCCATTACCGATAGTTCTGCCATATACAAAGTCAACAATAACAGGGGTAACAGCCTGACTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035157.10 |
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