Pregenerated sensors for SRPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032042Ensembl transcript IDs: ENSMUST00000034541.12, ENSMUST00000132799.2, ENSMUST00000138287.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTTTCTCCCAGGAAGGAAACATGCAAAGCTTCCATCTAGATTTTaGGAGCAGGCACAGGTTGGAAGGCAACTCTGCTCCCCGTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PFLPGRKHAKLPSRF*EQAQVGRQLCSPCF Trigger: GAAACACGGGGAGCAGAGTTGCCTTCCAACCTGTGCCTGCTCCCAAAATCTAGATGGAAGCTTTGCATGTTTCCTTCCTGGGAGAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR TCA 90 bp | GAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCTAACTaGTGCTTTGGGGCAACAATCGGGTGTAGAGTTCATCACCAGATT | + |
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Preference number: 1 (lower is better) Translates to: EKWALAFHSFVTRPN*CFGATIGCRVHHQI Trigger: AATCTGGTGATGAACTCTACACCCGATTGTTGCCCCAAAGCATCAGTTAGGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR GCA 90 bp | GATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTaGCTTTGTACTACACTGAAGACAAGTTGCTCACATACTCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: DWVRRSCKSPKLPSL*LCTTLKTSCSHTLK Trigger: CTTTAGAGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTCCTTCTAACCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR GCA 90 bp | CCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTaGTCACATACTCTAAAGCACATTCTTGATATAGGAATAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: PKLPSLCLCTTLKTS*SHTLKHILDIGIGT Trigger: AGTCCCTATTCCTATATCAAGAATGTGCTTTAGAGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCAGTGAAGGGGATGCCTaGGTAGGAAGAGGGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PVFLREVGTRLSLICNKASEGDA*VGRGRV Trigger: GACCCTCCCTCTTCCTACTCAGGCATCCCCTTCACT...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTATGCTCCCCGTGTTTCTaGGAGAAGTGGGCACTCGCC | + |
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Preference number: 2 (lower is better) Translates to: CISLGRQPSPYCTSSTSVCSPCF*EKWALA Trigger: GGCGAGTGCCCACTTCTCTCAGAAACACGGGGAGCA...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCAAGCTCCCCTCACTCTaGCTTTGTACTACACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PVFLREVGTRLSLICNKAKLPSL*LCTTLK Trigger: CTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTAGGGCTGAACAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCTCTAAAGCACATTCTTaGTATAGGAATAGGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GGRAEQRIGLEGAASLQSSKAHS*YRNRDL Trigger: CAAGTCCCTATTCCTATATCAAGAATGTGCTTTAGA...GCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTGTTCAGCCCTACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTACATTGGTCAAAGCTATaGTATGGAGTCTGTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: CISLGRQPSPYCTSSTSVHWSKL*YGVCRQ Trigger: CTGCCTACAGACTCCATATCATAGCTTTGACCAATG...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTAGCCTTTGTACTACACTaGAGACAAGTTGCTCACATA | + |
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Preference number: 2 (lower is better) Translates to: CISLGRQPSPYCTSSTSVAFVLH*RQVAHI Trigger: TATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGC...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | AAATTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACAGCAGTGATTGTAACATaGTTAGGCCCTCCTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KLCISLGRQPSPYCTSSTAVIVT*LGPPCR Trigger: TCTGCAAGGAGGGCCTAATCATGTTACAATCACTGC...TGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR TCA 90 bp | AGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCATACAGAATTACTTTTaGTTCAGCTTCTCGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: RHISHVTYPFIEDRALVCIQNYF*FSFSVR Trigger: CCGCACCGAGAAGCTGAATCAAAAGTAATTCTGTAT...GCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCTCAATTAAGATGAATGGGTaGACAGCTGGGATAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: HISHVTYPFIEDRALVCSIKMNG*TAGIKT Trigger: TGTCTTTATCCCAGCTGTTCACCCATTCATCTTAAT...TGAGCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| 3UTR-3UTR CCA 90 bp | GATAGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCGAATGGGTGAACAGCTaGGATAAAGACATACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: DRHISHVTYPFIEDRALVEWVNS*DKDIQN Trigger: ATTCTGTATGTCTTTATCCCAGCTGTTCACCCATTC...GACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCACATACTGGGGCAAGCGGCGATTaGGTATTAGGCAAGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: KLPSLCLCTTLKTSCSHTGASGD*VLGKSH Trigger: GTGGCTCTTGCCTAATACCAAATCGCCGCTTGCCCC...AGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR CCA 72 bp | CCAGGAAGGAAACATGCAAAGCTTCCATCTAGATTTTaGGAGCAGGCACAGGTTGGAAGGCAACTCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PGRKHAKLPSRF*EQAQVGRQLCS Trigger: GGAGCAGAGTTGCCTTCCAACCTGTGCCTGCTCCCAAAATCTAGATGGAAGCTTTGCATGTTTCCTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR TCA 72 bp | CCAGGTGTTGGGTTTTTCAACCATTGGTCAAAGCTATaGTATGGAGTCTGTAGGCAGAGTGAAGGGGATGCC | + |
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Preference number: 3 (lower is better) Translates to: PGVGFFNHWSKL*YGVCRQSEGDA Trigger: GGCATCCCCTTCACTCTGCCTACAGACTCCATATCATAGCTTTGACCAATGGTTGAAAAACCCAACACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR GCA 72 bp | AGAAGGAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTaGCTTTGTACTACACTGAAGACAAGTTGCTCACAT | + |
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Preference number: 3 (lower is better) Translates to: RRSCKSPKLPSL*LCTTLKTSCSH Trigger: ATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCACCATGGAAGAGGGAGGGTCATaGGGCAGTGATTGTAACATG | + |
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Preference number: 3 (lower is better) Translates to: SGIKPLELGPQTAPYLTMEEGGS*GSDCNM Trigger: CATGTTACAATCACTGCCCAATGACCCTCCCTCTTC...CATGGTGAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR CCA 72 bp | ACTCTAAAGCACATTCTTGATATAGGAATAGGGACTTaGGGCAAGCGGCGATTTGGTATTAGGCAAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TLKHILDIGIGT*GKRRFGIRQEP Trigger: TGGCTCTTGCCTAATACCAAATCGCCGCTTGCCCCAAGTCCCTATTCCTATATCAAGAATGTGCTTTAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR GCA 72 bp | TTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTaGACTAGTAGCACATCTGTAATACCAAACTACAGG | + |
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Preference number: 3 (lower is better) Translates to: LCISLGRQPSPY*TSSTSVIPNYR Trigger: CCTGTAGTTTGGTATTACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR TCA 72 bp | CCGAGCATTAGTCTGCTCAAAATTAAGATGAATGGGTaGACAGCTGGGATAAAGACATACAGAATTACTTTT | + |
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Preference number: 3 (lower is better) Translates to: PSISLLKIKMNG*TAGIKTYRITF Trigger: AAAAGTAATTCTGTATGTCTTTATCCCAGCTGTTCACCCATTCATCTTAATTTTGAGCAGACTAATGCTCGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR TCA 90 bp | GGTGGGTACGGGACAACAGGAATCCTTCTCAACAATCCCTTTCTCCCAGGAAGGAACGAATCAACGCGTTaGCGGGCCCGGTGCACGAGT | + |
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Preference number: 4 (lower is better) Translates to: GGYGTTGILLNNPFLPGRNESTR*RARCTS Trigger: ACTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTT...CCTTCCTGGGAGAAAGGGATTGTTGAGAAGGATTCCTGTTGTCCCGTACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCGGGCGCTGGCGACGTTaGGCATCCATGATATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PVFLREVGTRLSLICNKAGRWRR*ASMISR Trigger: CCGGGATATCATGGATGCCCAACGTCGCCAGCGCCC...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | AAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCGAGTCGCTCACGCCCTaGAAACACCAGAGCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: KSPKLPSLCLCTTLKTSCESLTP*KHQSTS Trigger: GCTTGTGCTCTGGTGTTTCCAGGGCGTGAGCGACTC...GCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | GCTGGCTCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCAGAAAGGGCTGCCTCTaGAGTTCCATTGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGSGIKPLELGPQTAPYLRKGCL*SSIGGG Trigger: CCCACCACCAATGGAACTCCAGAGGCAGCCCTTTCT...GAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGAGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | GAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACCCCTTGCCATGCTTCTaGATGAACTCCTCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELQVSKAPLTLPLYYTEDPLPCF*MNSSLF Trigger: GAAGAGAGAGGAGTTCATTCAGAAGCATGGCAAGGG...GTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | GAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACGAGCACGGATCTTACTaGTCTCCTCTGCTTCACGAA | + |
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Preference number: 4 (lower is better) Translates to: ELQVSKAPLTLPLYYTEDEHGSY*SPLLHE Trigger: TTCGTGAAGCAGAGGAGAGCAGTAAGATCCGTGCTC...GTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | TCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCACCATGGTGTGTGTACGAAGCTaGTCAACAGCCCCAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SGIKPLELGPQTAPYLTMVCVRS*STAPAR Trigger: TCGGGCTGGGGCTGTTGAGCAGCTTCGTACACACAC...CATGGTGAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR CAA 72 bp | CAAAGCTTCCATCTAGATTTTGGGAGCAGGCACAGGTaGGAAGGCAACTCTGCTCCCCGTGTTTCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QSFHLDFGSRHR*EGNSAPRVSER Trigger: TCTCTCAGAAACACGGGGAGCAGAGTTGCCTTCCAACCTGTGCCTGCTCCCAAAATCTAGATGGAAGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | GAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGTGTGAGAGCCTCATaGGTGAAAGAGTTGTTACCG | + |
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Preference number: 4 (lower is better) Translates to: ELQVSKAPLTLPLYYTEDSVRAS*VKELLP Trigger: CGGTAACAACTCTTTCACTCATGAGGCTCTCACACT...GTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | AAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCCCTGGAGAGCTTGCTTaGCTGTTGAAGTCACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KSPKLPSLCLCTTLKTSCPGELA*LLKSQC Trigger: GCACTGTGACTTCAACAGTCAAGCAAGCTCTCCAGG...GCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | ACCTCAAACTGCTCCTTATCTCACCATGGCTCTGTGATCACACTAGTTAGCAACATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TSNCSLSHHGSVITLVSNMSRGV*AIEWSA Trigger: GGCTGACCATTCTATGGCTCAGACACCTCGGCTCAT...GTTGCTAACTAGTGTGATCACAGAGCCATGGTGAGATAAGGAGCAGTTTGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | CAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCGATTCCTGGAGAGCTTaGTTGACTGTTGAAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: QRIGLEGAASLQSSPHSADSWRA*LTVEVT Trigger: TGTGACTTCAACAGTCAAGCAAGCTCTCCAGGAATC...GGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTTTGTGTTCTTCAACGTAGCACTTGTCTACCAGGCACTGTAGAAGAGGGGCATTGTCTTGCATaGGGCCAGCAGTGTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: QEVCVLQRSTCLPGTVEEGHCLA*GQQCLP Trigger: TGGTAGACACTGCTGGCCGCATGCAAGACAATGCCC...CTCTTCTACAGTGCCTGGTAGACAAGTGCTACGTTGAAGAACACAAACCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTTTGTGTTCTTCAACGTAGCACTTGTCTACCAGGCACTGTAGAAGAGAGAGGGGCATTGTCTTaGATGCGGCCAGCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: QEVCVLQRSTCLPGTVEERGALS*MRPAVS Trigger: AGACACTGCTGGCCGCATGCAAGACAATGCCCCTCT...CTCTTCTACAGTGCCTGGTAGACAAGTGCTACGTTGAAGAACACAAACCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | GGTGGGTACGGGACAACAGGAATCCTTCTCAACAATCCCTTTCTCCCAGGAAGGGGATCAGCTCCTCTTTaGAAAGTTCTCCATTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGYGTTGILLNNPFLPGRGSAPL*KVLHSQ Trigger: CTGAGAATGGAGAACTTTCCAAAGAGGAGCTGATCC...CCTTCCTGGGAGAAAGGGATTGTTGAGAAGGATTCCTGTTGTCCCGTACCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | GGTGGGTACGGGACAACAGGAATCCTTCTCAACAATCCCTTTCTCCCAGGAAGGAGCTTGCTTGACTGTTaGAGTCACAGTGCTAAATGT | + |
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Preference number: 4 (lower is better) Translates to: GGYGTTGILLNNPFLPGRSLLDC*SHSAKC Trigger: ACATTTAGCACTGTGACTTCAACAGTCAAGCAAGCT...CCTTCCTGGGAGAAAGGGATTGTTGAGAAGGATTCCTGTTGTCCCGTACCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | AAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCACATACTGAACAATGCCATCAATaGGCCGAGGTGTCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KLPSLCLCTTLKTSCSHTEQCHQ*AEVSEP Trigger: TGGCTCAGACACCTCGGCTCATTGATGGCATTGTTC...AGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | AGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCGGGCATTGTCTTGCATaGGGCCAGCAGTGTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: RHISHVTYPFIEDRALVCGHCLA*GQQCLP Trigger: TGGTAGACACTGCTGGCCGCATGCAAGACAATGCCC...GCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR GCA 90 bp | AGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCAGAGGGGCATTGTCTTaGATGCGGCCAGCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RHISHVTYPFIEDRALVCRGALS*MRPAVS Trigger: AGACACTGCTGGCCGCATGCAAGACAATGCCCCTCT...GCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CCA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCGAGTTCCATTGGTGGTaGGAGTACTGTAATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVFLREVGTRLSLICNKAEFHWW*EYCNPR Trigger: TCTTGGATTACAGTACTCCCACCACCAATGGAACTC...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| 3UTR CAA 72 bp | TCATTGGGCAGTGATTGTAACATGATTAGGCCCTCCTaGCAGAAGGAGGTAGGGCTGAACAAAGGATTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLGSDCNMIRPS*QKEVGLNKGLG Trigger: ACCCAATCCTTTGTTCAGCCCTACCTCCTTCTGCAAGGAGGGCCTAATCATGTTACAATCACTGCCCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | ACAGCTGGGATAAAGACATACAGAATTACTTTTGATTCAGCTTCTCGGTGCGGAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TAGIKTYRITFDSASRCGMSRGV*AIEWSA Trigger: GGCTGACCATTCTATGGCTCAGACACCTCGGCTCAT...TCCGCACCGAGAAGCTGAATCAAAAGTAATTCTGTATGTCTTTATCCCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR TCA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTAAGCGTGAGGATCTTCTaGAAGCCAACCACAAACACC | + |
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Preference number: 4 (lower is better) Translates to: CISLGRQPSPYCTSSTSVSVRIF*KPTTNT Trigger: GGTGTTTGTGGTTGGCTTTCAGAAGATCCTCACGCT...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | ACAGCTGGGATAAAGACATACAGAATTACTTTTGATTCAGCTTCTCGGTGCGGAGAACAATGCCATCAATaGGCCGAGGTGTCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TAGIKTYRITFDSASRCGEQCHQ*AEVSEP Trigger: TGGCTCAGACACCTCGGCTCATTGATGGCATTGTTC...TCCGCACCGAGAAGCTGAATCAAAAGTAATTCTGTATGTCTTTATCCCAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAAACTGCTCCTTATCTCACCATGGCTCTGTGATCACACTAGTTAGCAACCTGGAGTTCCATTGGTaGTGGGAGTACTGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSNCSLSHHGSVITLVSNLEFHW*WEYCNP Trigger: TGGATTACAGTACTCCCACCACCAATGGAACTCCAG...GTTGCTAACTAGTGTGATCACAGAGCCATGGTGAGATAAGGAGCAGTTTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | ACTCTAAAGCACATTCTTGATATAGGAATAGGGACTTGGGGCAAGCGGCGATTTTACGTGCAAAGGCAATaGCTTCCATGGCAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKHILDIGIGTWGKRRFYVQRQ*LPWQCQ Trigger: CTGGCATTGCCATGGAAGCCATTGCCTTTGCACGTA...AAATCGCCGCTTGCCCCAAGTCCCTATTCCTATATCAAGAATGTGCTTTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | GCTGGCTCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCCTCCTTTGGAGTATCTaGCTTTGTAGATTTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGIKPLELGPQTAPYLLLWSI*LCRFTG Trigger: TCCAGTAAATCTACAAAGTCAGATACTCCAAAGGAG...GAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGAGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | GTAATACCAAACTACAGGACAAGTCTTAACAAGAGGTTTGTGTTCTTCAACGTACTGCAATCCAGATCTTaGAGCTGTCCCCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIPNYRTSLNKRFVFFNVLQSRS*SCPPGP Trigger: TGGGCCTGGGGGACAGCTTCAAGATCTGGATTGCAG...TACGTTGAAGAACACAAACCTCTTGTTAAGACTTGTCCTGTAGTTTGGTATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | CAAGAGGTTTGTGTTCTTCAACGTAGCACTTGTCTACCAGGCACTGTAGAAGAGGTTGTTGGATCTCTGTaGGATACTTATCCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QEVCVLQRSTCLPGTVEEVVGSL*DTYPGT Trigger: TGTTCCGGGATAAGTATCGCACAGAGATCCAACAAC...CTCTTCTACAGTGCCTGGTAGACAAGTGCTACGTTGAAGAACACAAACCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | AAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCACATACTCATCATCTGAGCTGCTaGAATCCAGATCTTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPSLCLCTTLKTSCSHTHHLSC*NPDLEA Trigger: AGCTTCAAGATCTGGATTGCAGCAGCTCAGATGATG...AGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTACCTTTTTCAAACAACTaGACCATCGTACGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CISLGRQPSPYCTSSTSVPFSNN*TIVRPP Trigger: TGGTGGCCGTACGATGGTGCAGTTGTTTGAAAAAGG...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | AGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCCCTTTTTCAAACAACTaGACCATCGTACGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RHISHVTYPFIEDRALVCPFSNN*TIVRPP Trigger: TGGTGGCCGTACGATGGTGCAGTTGTTTGAAAAAGG...GCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CCA 90 bp | CACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCTCATACGTGCAAAGGCAATaGCTTCCATGGCAATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HISHVTYPFIEDRALVCSYVQRQ*LPWQCQ Trigger: CTGGCATTGCCATGGAAGCCATTGCCTTTGCACGTA...TGAGCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR TCA 90 bp | TCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCACCATGTTCTTAGCAATGAGATaGTCACGCATCTTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIKPLELGPQTAPYLTMFLAMR*SRILSS Trigger: GCTAGACAAGATGCGTGATCATCTCATTGCTAAGAA...CATGGTGAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | AAATTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACACTACATAGGTCAGCGTaGGGATCTTCTGAAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLCISLGRQPSPYCTSSTLHRSA*GSSESQ Trigger: TTGGCTTTCAGAAGATCCTCACGCTGACCTATGTAG...TGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR TCA 90 bp | CACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCTCATTAAACTTCAACCCCTaGAATGAGCCTTCAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HISHVTYPFIEDRALVCSLNFNP*NEPSAR Trigger: CCTTGCTGAAGGCTCATTTCAGGGGTTGAAGTTTAA...TGAGCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGGTTTGTGTTCTTCAACGTAGCACTTGTCTACCAGGCACTGTAGAAGAGAACACCAGCTCAAACTaGTTGTCCAGTTTATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEVCVLQRSTCLPGTVEENTSSN*LSSLYL Trigger: CAAGTATAAACTGGACAACCAGTTTGAGCTGGTGTT...CTCTTCTACAGTGCCTGGTAGACAAGTGCTACGTTGAAGAACACAAACCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | AAATTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACACCTCTGGAGTTCCATTaGTGGTGGGAGTACTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLCISLGRQPSPYCTSSTPLEFH*WWEYCN Trigger: ATTACAGTACTCCCACCACCAATGGAACTCCAGAGG...TGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | GTAATACCAAACTACAGGACAAGTCTTAACAAGAGGTTTGTGTTCTTCAACGTAATCTTCAGAAAGGGCTaGCTCTGGAGTTCCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VIPNYRTSLNKRFVFFNVIFRKG*LWSSIG Trigger: ACCAATGGAACTCCAGAGGCAGCCCTTTCTGAAGAT...TACGTTGAAGAACACAAACCTCTTGTTAAGACTTGTCCTGTAGTTTGGTATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | AAATTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATGTACTAGAGATTCCTaGAGAGCTTGCTTGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLCISLGRQPSPYCTSSTCTRDS*RACLTV Trigger: AACAGTCAAGCAAGCTCTCCAGGAATCTCTAGTACA...TGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | AAATTATGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACACGCAGGAAGTCATTTTaGAAATCAAATGTGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KLCISLGRQPSPYCTSSTRRKSF*KSNVPF Trigger: GAATGGCACATTTGATTTCCAAAATGACTTCCTGCG...TGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR GCA 90 bp | GTAATACCAAACTACAGGACAAGTCTTAACAAGAGGTTTGTGTTCTTCAACGTACTTCATCATCTGAGCTaGTGCAATCCAGATCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIPNYRTSLNKRFVFFNVLHHLS*CNPDLE Trigger: TTCAAGATCTGGATTGCAGCAGCTCAGATGATGAAG...TACGTTGAAGAACACAAACCTCTTGTTAAGACTTGTCCTGTAGTTTGGTATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | GTAATACCAAACTACAGGACAAGTCTTAACAAGAGGTTTGTGTTCTTCAACGTAAAAGCACTCTGTTGTTaGATCTCTGTGCGATACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VIPNYRTSLNKRFVFFNVKALCC*ISVRYL Trigger: TAAGTATCGCACAGAGATCCAACAACAGAGTGCTTT...TACGTTGAAGAACACAAACCTCTTGTTAAGACTTGTCCTGTAGTTTGGTATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CCA 90 bp | GTAATACCAAACTACAGGACAAGTCTTAACAAGAGGTTTGTGTTCTTCAACGTATCCCTTCTAATTTGTTaGCAACAGATTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIPNYRTSLNKRFVFFNVSLLIC*QQIHRA Trigger: AGCTCTGTGAATCTGTTGCCAACAAATTAGAAGGGA...TACGTTGAAGAACACAAACCTCTTGTTAAGACTTGTCCTGTAGTTTGGTATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 90 bp | TGTTACCGCCCCGTTCCTGCAGCAGTACGGAACGAATCAACGCGTTaGCGGGCCCGGTGCACGAGTCGCTCACGCCCTGGAAACACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CYRPVPAAVRNESTR*RARCTSRSRPGNTR Trigger: TCTGGTGTTTCCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTTCCGTACTGCTGCAGGAACGGGGCGGTAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 90 bp | CGAATCAACGCGTTGACGGGCCCGGTGCACGAGTCGCTCACGCCCTaGAAACACCAGAGCACAAGCCCGCCCTTCGAGAAGATGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RINALTGPVHESLTP*KHQSTSPPFEKMVK Trigger: CTTCACCATCTTCTCGAAGGGCGGGCTTGTGCTCTGGTGTTTCCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGCGTTGATTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACGAACGAATCAACGCGTaGACGGGCCCGGTGCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELQVSKAPLTLPLYYTEDERINA*TGPVHE Trigger: CTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTTC...GTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | GCTGGCTCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCAGGGCGCTGGCGACGTaGGGCATCCATGATATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSGIKPLELGPQTAPYLRALAT*GIHDIP Trigger: CGGGATATCATGGATGCCCAACGTCGCCAGCGCCCT...GAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCCAGAGGGGCATTGTCTaGCATGCGGCCAGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVFLREVGTRLSLICNKAQRGIV*HAASSV Trigger: GACACTGCTGGCCGCATGCAAGACAATGCCCCTCTG...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | CAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCGCAGCCACCACAGCCTaGGCATTAAGACTGCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRIGLEGAASLQSSPHSAAATTA*ALRLRR Trigger: CCTACGCAGTCTTAATGCCAAGGCTGTGGTGGCTGC...GGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS GCA 90 bp | ACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTGTCTTaGATGCGGCCAGCAGTGTCTACCAGCACCACATCAAAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVMSLARAVIRGALS*MRPAVSTSTTSKPW Trigger: CCAAGGCTTTGATGTGGTGCTGGTAGACACTGCTGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS-3UTR CAA 90 bp | GGAGGTAGGGCTGAACAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCGTCATCAGAGGGGCATaGTCTTGCATGCGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRAEQRIGLEGAASLQSVIRGA*SCMRPA Trigger: TGCTGGCCGCATGCAAGACAATGCCCCTCTGATGAC...GCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTGTTCAGCCCTACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 90 bp | CCAGATCTTGAAGCTGTCCCCCAGGCCCAGTTCCTCGAATCAAGTTaGTATCTTCAGAAAGGGCTGCCTCTGGAGTTCCATTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDLEAVPQAQFLESS*YLQKGLPLEFHWWW Trigger: CCACCACCAATGGAACTCCAGAGGCAGCCCTTTCTGAAGATATCAACTTGATTCGAGGAACTGGGCCTGGGGGACAGCTTCAAGATCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | AAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCACATACTGCTGCAATCCAGATCTaGAAGCTGTCCCCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLPSLCLCTTLKTSCSHTAAIQI*KLSPRP Trigger: GGGCCTGGGGGACAGCTTCAAGATCTGGATTGCAGC...AGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS GCA 90 bp | CCCAGGCCCAGTTCCTCGAATCAAGTTGATATCTTCAGAAAGGGCTaGCTCTGGAGTTCCATTGGTGGTGGGAGTACTGTAATCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRPSSSNQVDIFRKG*LWSSIGGGSTVIQD Trigger: GTCTTGGATTACAGTACTCCCACCACCAATGGAACTCCAGAGGCAGCCCTTTCTGAAGATATCAACTTGATTCGAGGAACTGGGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | CAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCGTAGATTTACTGGATTaGTCCAGACCCTTGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QRIGLEGAASLQSSPHSAVDLLD*SRPLPC Trigger: GCATGGCAAGGGTCTGGACAAATCCAGTAAATCTAC...GGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | ACAGCTGGGATAAAGACATACAGAATTACTTTTGATTCAGCTTCTCGGTGCGGACAGAGGGGCATTGTCTaGCATGCGGCCAGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAGIKTYRITFDSASRCGQRGIV*HAASSV Trigger: GACACTGCTGGCCGCATGCAAGACAATGCCCCTCTG...TCCGCACCGAGAAGCTGAATCAAAAGTAATTCTGTATGTCTTTATCCCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CAA 90 bp | AGGCACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCGTCATCAGAGGGGCATaGTCTTGCATGCGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHISHVTYPFIEDRALVCVIRGA*SCMRPA Trigger: TGCTGGCCGCATGCAAGACAATGCCCCTCTGATGAC...GCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS TCA 90 bp | AGCTCAAACTGGTTGTCCAGTTTATACTTGAGTGTGAGAGCCTCATaGGTGAAAGAGTTGTTACCGCCCCGTTCCTGCAGCAGTACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSNWLSSLYLSVRAS*VKELLPPRSCSSTE Trigger: TTCCGTACTGCTGCAGGAACGGGGCGGTAACAACTCTTTCACTCATGAGGCTCTCACACTCAAGTATAAACTGGACAACCAGTTTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | TCTGGAATTAAGCCATTAGAGCTGGGACCTCAAACTGCTCCTTATCTCACCATGACCCGGGGTGCTTTTTaGCCCTTCTCCTTTGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGIKPLELGPQTAPYLTMTRGAF*PFSFGV Trigger: TACTCCAAAGGAGAAGGGCAAAAAAGCACCCCGGGT...CATGGTGAGATAAGGAGCAGTTTGAGGTCCCAGCTCTAATGGCTTAATTCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | GGTGGGTACGGGACAACAGGAATCCTTCTCAACAATCCCTTTCTCCCAGGAAGGTTCCCTTCTAATTTGTaGGCAACAGATTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGYGTTGILLNNPFLPGRFPSNL*ATDSQS Trigger: GCTCTGTGAATCTGTTGCCAACAAATTAGAAGGGAA...CCTTCCTGGGAGAAAGGGATTGTTGAGAAGGATTCCTGTTGTCCCGTACCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | AAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCCTGGAGAGCTTGCTaGACTGTTGAAGTCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSPKLPSLCLCTTLKTSCSWRAC*TVEVTV Trigger: CACTGTGACTTCAACAGTCAAGCAAGCTCTCCAGGA...GCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | CCCGTGTTTCTGAGAGAAGTGGGCACTCGCCTTTCACTCATTTGTAACAAGGCCGAAATCTTGGCAAGATaGGTAGACTTCCCTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PVFLREVGTRLSLICNKAEILAR*VDFPTP Trigger: TGGAGTAGGGAAGTCTACCAATCTTGCCAAGATTTC...GGCCTTGTTACAAATGAGTGAAAGGCGAGTGCCCACTTCTCTCAGAAACACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | GGAGGTAGGGCTGAACAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCATAGCAGCTCCCACCTaGTCATCAATGGTGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGRAEQRIGLEGAASLQSIAAPT*SSMVSN Trigger: ATTTGACACCATTGATGACAAGGTGGGAGCTGCTAT...GCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTGTTCAGCCCTACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 90 bp | CCCAGTTCCTCGAATCAAGTTGATATCTTCAGAAAGGGCTGCCTCTaGAGTTCCATTGGTGGTGGGAGTACTGTAATCCAAGACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSSNQVDIFRKGCL*SSIGGGSTVIQDFL Trigger: AAGGAAGTCTTGGATTACAGTACTCCCACCACCAATGGAACTCCAGAGGCAGCCCTTTCTGAAGATATCAACTTGATTCGAGGAACTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | GGAGGTAGGGCTGAACAAAGGATTGGGTTAGAAGGAGCTGCAAGTCTCCAAAGCAGCCAAAAGGAAATCTaGGCAAGATTGGTAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGRAEQRIGLEGAASLQSSQKEI*ARLVDF Trigger: GAAGTCTACCAATCTTGCCAAGATTTCCTTTTGGCT...GCTTTGGAGACTTGCAGCTCCTTCTAACCCAATCCTTTGTTCAGCCCTACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 90 bp | GTGTCAAATTTGGTAAGAACAATGCCATCAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCCAAGGCTCTGTTGAACTTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSNLVRTMPSMSRGV*AIEWSAKALLNLTS Trigger: ACTGGTCAAGTTCAACAGAGCCTTGGCTGACCATTCTATGGCTCAGACACCTCGGCTCATTGATGGCATTGTTCTTACCAAATTTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGCAAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACACAAAGACGATGGGTTaGCTTGTGATGTATGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ELQVSKAPLTLPLYYTEDTKTMG*LVMYVI Trigger: TATGACATACATCACAAGCAAACCCATCGTCTTTGT...GTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTTGCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 90 bp | GACTTTGTAGATTTACTGGATTTGTCCAGACCCTTGCCATGCTTCTaGATGAACTCCTCTCTCTTCCTACGGATCAGCTCCTCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DFVDLLDLSRPLPCF*MNSSLFLRISSSLE Trigger: TTCCAAAGAGGAGCTGATCCGTAGGAAGAGAGAGGAGTTCATTCAGAAGCATGGCAAGGGTCTGGACAAATCCAGTAAATCTACAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000138287.8 |
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| CDS-3UTR CAA 90 bp | AAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCACCAGCTCAAACTGGTaGTCCAGTTTATACTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KSPKLPSLCLCTTLKTSCTSSNW*SSLYLS Trigger: ACTCAAGTATAAACTGGACAACCAGTTTGAGCTGGT...GCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTACGGATCAGCTCCTCTTaGGAAAGTTCTCCATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: CISLGRQPSPYCTSSTSVRISSS*ESSPFS Trigger: TGAGAATGGAGAACTTTCCAAAGAGGAGCTGATCCG...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | AAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCTCACATACTCCGCAGGAAGTCATTTaGGAAATCAAATGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: KLPSLCLCTTLKTSCSHTPQEVI*EIKCAI Trigger: AATGGCACATTTGATTTCCAAAATGACTTCCTGCGG...AGTATGTGAGCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | AAGTCTCCAAAGCTCCCCTCACTCTGCCTTTGTACTACACTGAAGACAAGTTGCACTTTCCCTTCTAATTaGTTGGCAACAGATTCACAG | + |
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Preference number: 5 (lower is better) Translates to: KSPKLPSLCLCTTLKTSCTFPSN*LATDSQ Trigger: CTGTGAATCTGTTGCCAACAAATTAGAAGGGAAAGT...GCAACTTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGAGCTTTGGAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | TGTATTTCTCTGGGCAGACAGCCTTCACCTTATTGCACTAGTAGCACATCTGTAACCAAGTCAGGTGTATaGACAGTAATGAGTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: CISLGRQPSPYCTSSTSVTKSGV*TVMSLA Trigger: GGCCAAACTCATTACTGTCAATACACCTGACTTGGT...TACAGATGTGCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS GCA 90 bp | ATGTGCCATTCAATAGACTTAAAGCACTCTGTTGTTGGATCTCTGTaGGATACTTATCCCGGAACAGTCGGTGCACATCATCTATCAACT | + |
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Preference number: 5 (lower is better) Translates to: MCHSIDLKHSVVGSL*DTYPGTVGAHHLST Trigger: AGTTGATAGATGATGTGCACCGACTGTTCCGGGATAAGTATCGCACAGAGATCCAACAACAGAGTGCTTTAAGTCTATTGAATGGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 90 bp | TGGAAATCAAATGTGCCATTCAATAGACTTAAAGCACTCTGTTGTTaGATCTCTGTGCGATACTTATCCCGGAACAGTCGGTGCACATCA | + |
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Preference number: 5 (lower is better) Translates to: WKSNVPFNRLKALCC*ISVRYLSRNSRCTS Trigger: TGATGTGCACCGACTGTTCCGGGATAAGTATCGCACAGAGATCCAACAACAGAGTGCTTTAAGTCTATTGAATGGCACATTTGATTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 90 bp | TTACTGCTCTCCTCTGCTTCACGAAGGAGCCGCAGGAAGTCATTTTaGAAATCAAATGTGCCATTCAATAGACTTAAAGCACTCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: LLLSSASRRSRRKSF*KSNVPFNRLKALCC Trigger: ACAACAGAGTGCTTTAAGTCTATTGAATGGCACATTTGATTTCCAAAATGACTTCCTGCGGCTCCTTCGTGAAGCAGAGGAGAGCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS-3UTR CAA 90 bp | CACATTTCTCATGTGACATATCCCTTTATTGAGGACCGAGCATTAGTCTGCTCACCTTCAGCAAGGTCCTaGTCATCAATGGTGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: HISHVTYPFIEDRALVCSPSARS*SSMVSN Trigger: ATTTGACACCATTGATGACAAGGACCTTGCTGAAGG...TGAGCAGACTAATGCTCGGTCCTCAATAAAGGGATATGTCACATGAGAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS-3UTR CAA 90 bp | GGGATAAAGACATACAGAATTACTTTTGATTCAGCTTCTCGGTGCGGACCTAAAACCAAGTCAGGTGTATaGACAGTAATGAGTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: GIKTYRITFDSASRCGPKTKSGV*TVMSLA Trigger: GGCCAAACTCATTACTGTCAATACACCTGACTTGGT...TTTAGGTCCGCACCGAGAAGCTGAATCAAAAGTAATTCTGTATGTCTTTATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS TCA 90 bp | GAACCTGTTGAGTGTTTTAGTTTCCTTAAACTTCAACCCCTGAAATaGGCCTTCAGCAAGGTCCTTGTCATCAATGGTGTCAAATTTGGT | + |
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Preference number: 5 (lower is better) Translates to: EPVECFSFLKLQPLK*AFSKVLVINGVKFG Trigger: ACCAAATTTGACACCATTGATGACAAGGACCTTGCTGAAGGCTCATTTCAGGGGTTGAAGTTTAAGGAAACTAAAACACTCAACAGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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| CDS CCA 72 bp | GCGTTGACGGGCCCGGTGCACGAGTCGCTCACGCCCTaGAAACACCAGAGCACAAGCCCGCCCTTCGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALTGPVHESLTP*KHQSTSPPFEK Trigger: CTTCTCGAAGGGCGGGCTTGTGCTCTGGTGTTTCCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 72 bp | CCCCGTTCCTGCAGCAGTACGGAACGAATCAACGCGTaGACGGGCCCGGTGCACGAGTCGCTCACGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRSCSSTERINA*TGPVHESLTPW Trigger: CCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTTCCGTACTGCTGCAGGAACGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 72 bp | CCCGTTCCTGCAGCAGTACGGAACGAATCAACGCGTTaGCGGGCCCGGTGCACGAGTCGCTCACGCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PVPAAVRNESTR*RARCTSRSRPG Trigger: TCCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTTCCGTACTGCTGCAGGAACGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | TTGTTACCGCCCCGTTCCTGCAGCAGTACGGAACGAATCAACGCGTaGACGGGCCCGGTGCACGAGTCGCTCACGCCCTGGAAACACCAG | + |
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Preference number: 6 (lower is better) Translates to: LLPPRSCSSTERINA*TGPVHESLTPWKHQ Trigger: CTGGTGTTTCCAGGGCGTGAGCGACTCGTGCACCGGGCCCGTCAACGCGTTGATTCGTTCCGTACTGCTGCAGGAACGGGGCGGTAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS GCA 72 bp | TGGAGGGCAGTCAGGCGCCGGGTGTGTGTACGAAGCTaGTCAACAGCCCCAGCCCGAAATGTATCACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WRAVRRRVCVRS*STAPARNVSQA Trigger: TGCCTGTGATACATTTCGGGCTGGGGCTGTTGAGCAGCTTCGTACACACACCCGGCGCCTGACTGCCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 72 bp | GTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATaGTCTTGCATGCGGCCAGCAGTGTCTACCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: VMSLARAVIRGA*SCMRPAVSTST Trigger: GGTGCTGGTAGACACTGCTGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS TCA 72 bp | GCCCCTTCATCATCTGAGCTGCTGCAATCCAGATCTTaGAGCTGTCCCCCAGGCCCAGTTCCTCGAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: APSSSELLQSRS*SCPPGPVPRIK Trigger: CTTGATTCGAGGAACTGGGCCTGGGGGACAGCTTCAAGATCTGGATTGCAGCAGCTCAGATGATGAAGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | GACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTGTCTaGCATGCGGCCAGCAGTGTCTACCAGCACCACATCAAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: DSNEFGQGSHQRGIV*HAASSVYQHHIKAL Trigger: CAAGGCTTTGATGTGGTGCTGGTAGACACTGCTGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS CAA 72 bp | ACCACAGAAGGTAACAACATAAGGGCGCTGGCGACGTaGGGCATCCATGATATCCCGGAGCATGTCTACACG | + |
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Preference number: 6 (lower is better) Translates to: TTEGNNIRALAT*GIHDIPEHVYT Trigger: CGTGTAGACATGCTCCGGGATATCATGGATGCCCAACGTCGCCAGCGCCCTTATGTTGTTACCTTCTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | TCCATTAACACCACAGAAGGTAACAACATAAGGGCGCTGGCGACGTaGGGCATCCATGATATCCCGGAGCATGTCTACACGACGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SINTTEGNNIRALAT*GIHDIPEHVYTTLW Trigger: CCACAGCGTCGTGTAGACATGCTCCGGGATATCATGGATGCCCAACGTCGCCAGCGCCCTTATGTTGTTACCTTCTGTGGTGTTAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 72 bp | CCCAGAGTTCCCTTGGTAGCACTAGGCTTGGTATTTTaGGTGGCCCCTTCATCATCTGAGCTGCTGCAATCC | + |
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Preference number: 6 (lower is better) Translates to: PRVPLVALGLVF*VAPSSSELLQS Trigger: GGATTGCAGCAGCTCAGATGATGAAGGGGCCACTCAAAATACCAAGCCTAGTGCTACCAAGGGAACTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | CGCATCTTGTCTAGCACAGATTCCATGTCTTCTCGACTCAAGCTCTaGGAACCCACCAGACCCTTCAGCATCCCAAACATGCCACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RILSSTDSMSSRLKL*EPTRPFSIPNMPPR Trigger: TCTGGGTGGCATGTTTGGGATGCTGAAGGGTCTGGTGGGTTCCAAGAGCTTGAGTCGAGAAGACATGGAATCTGTGCTAGACAAGATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | GTATTGACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATaGTCTTGCATGCGGCCAGCAGTGTCTACCAGCACCACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VLTVMSLARAVIRGA*SCMRPAVSTSTTSK Trigger: CTTTGATGTGGTGCTGGTAGACACTGCTGGCCGCATGCAAGACAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTCAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS CAA 90 bp | TTGCCTACTAAGGCCTCCCCTACAAACAGCACCAAGTCAGGTGTATaGACAGTAATGAGTTTGGCCAGGGCAGTCATCAGAGGGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: LPTKASPTNSTKSGV*TVMSLARAVIRGAL Trigger: CAATGCCCCTCTGATGACTGCCCTGGCCAAACTCATTACTGTCAATACACCTGACTTGGTGCTGTTTGTAGGGGAGGCCTTAGTAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS TCA 72 bp | TGGTTGTCCAGTTTATACTTGAGTGTGAGAGCCTCATaGGTGAAAGAGTTGTTACCGCCCCGTTCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WLSSLYLSVRAS*VKELLPPRSCS Trigger: GCTGCAGGAACGGGGCGGTAACAACTCTTTCACTCATGAGGCTCTCACACTCAAGTATAAACTGGACAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 72 bp | ATGAACTCCTCTCTCTTCCTACGGATCAGCTCCTCTTaGGAAAGTTCTCCATTCTCAGGTCCCGCTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: MNSSLFLRISSS*ESSPFSGPAER Trigger: TCTCTCAGCGGGACCTGAGAATGGAGAACTTTCCAAAGAGGAGCTGATCCGTAGGAAGAGAGAGGAGTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000138287.8 |
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| CDS CAA 72 bp | TCTAGCACAGATTCCATGTCTTCTCGACTCAAGCTCTaGGAACCCACCAGACCCTTCAGCATCCCAAACATG | + |
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Preference number: 6 (lower is better) Translates to: SSTDSMSSRLKL*EPTRPFSIPNM Trigger: CATGTTTGGGATGCTGAAGGGTCTGGTGGGTTCCAAGAGCTTGAGTCGAGAAGACATGGAATCTGTGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 72 bp | TTGGTAAGAACAATGCCATCAATGAGCCGAGGTGTCTaGGCCATAGAATGGTCAGCCAAGGCTCTGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LVRTMPSMSRGV*AIEWSAKALLN Trigger: GTTCAACAGAGCCTTGGCTGACCATTCTATGGCTCAGACACCTCGGCTCATTGATGGCATTGTTCTTACCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034541.12 ENSMUST00000132799.2 |
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| CDS GCA 72 bp | GGCTGTAGGATCTGTACTAGAGATTCCTGGAGAGCTTaGTTGACTGTTGAAGTCACAGTGCTAAATGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GCRICTRDSWRA*LTVEVTVLNVP Trigger: GGGGACATTTAGCACTGTGACTTCAACAGTCAAGCAAGCTCTCCAGGAATCTCTAGTACAGATCCTACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 90 bp | GTTGAAGTCACAGTGCTAAATGTCCCCATCACTTTCCCTTCTAATTaGTTGGCAACAGATTCACAGAGCTGGACAGCAATGTCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VEVTVLNVPITFPSN*LATDSQSWTAMSAA Trigger: GGCTGCTGACATTGCTGTCCAGCTCTGTGAATCTGTTGCCAACAAATTAGAAGGGAAAGTGATGGGGACATTTAGCACTGTGACTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 72 bp | GCACATCATCTATCAACTTGTCTACATAGGTCAGCGTaGGGATCTTCTGAAAGCCAACCACAAACACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AHHLSTCLHRSA*GSSESQPQTPA Trigger: AGCTGGTGTTTGTGGTTGGCTTTCAGAAGATCCTCACGCTGACCTATGTAGACAAGTTGATAGATGATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 72 bp | TGTAGGATCTGTACTAGAGATTCCTGGAGAGCTTGCTaGACTGTTGAAGTCACAGTGCTAAATGTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: CRICTRDSWRAC*TVEVTVLNVPI Trigger: GATGGGGACATTTAGCACTGTGACTTCAACAGTCAAGCAAGCTCTCCAGGAATCTCTAGTACAGATCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS GCA 72 bp | TCAATAGACTTAAAGCACTCTGTTGTTGGATCTCTGTaGGATACTTATCCCGGAACAGTCGGTGCACATCAT | + |
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Preference number: 6 (lower is better) Translates to: SIDLKHSVVGSL*DTYPGTVGAHH Trigger: ATGATGTGCACCGACTGTTCCGGGATAAGTATCGCACAGAGATCCAACAACAGAGTGCTTTAAGTCTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 72 bp | AATGTGCCATTCAATAGACTTAAAGCACTCTGTTGTTaGATCTCTGTGCGATACTTATCCCGGAACAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: NVPFNRLKALCC*ISVRYLSRNSR Trigger: CCGACTGTTCCGGGATAAGTATCGCACAGAGATCCAACAACAGAGTGCTTTAAGTCTATTGAATGGCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CAA 72 bp | ACAGTGCTAAATGTCCCCATCACTTTCCCTTCTAATTaGTTGGCAACAGATTCACAGAGCTGGACAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: TVLNVPITFPSN*LATDSQSWTAM Trigger: CATTGCTGTCCAGCTCTGTGAATCTGTTGCCAACAAATTAGAAGGGAAAGTGATGGGGACATTTAGCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS CCA 72 bp | TCCTCTGCTTCACGAAGGAGCCGCAGGAAGTCATTTTaGAAATCAAATGTGCCATTCAATAGACTTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSASRRSRRKSF*KSNVPFNRLKA Trigger: TGCTTTAAGTCTATTGAATGGCACATTTGATTTCCAAAATGACTTCCTGCGGCTCCTTCGTGAAGCAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034541.12 |
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| CDS TCA 72 bp | CTGTTGAGTGTTTTAGTTTCCTTAAACTTCAACCCCTaGAATGAGCCTTCAGCAAGGTCCTTGTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: LLSVLVSLNFNP*NEPSARSLSSM Trigger: CATTGATGACAAGGACCTTGCTGAAGGCTCATTTCAGGGGTTGAAGTTTAAGGAAACTAAAACACTCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132799.2 |
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