Pregenerated sensors for SRPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002007Ensembl transcript IDs: ENSMUST00000002081.6
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATaGAAGAGCAGCTCCCACAGGGTGGAAGAAGTTGCCTGCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CPSISSCHGGEHPAG*KSSSHRVEEVACFP Trigger: GGGAAAGCAGGCAACTTCTTCCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR TCA 90 bp | GTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTaGGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: VEIWALPQHLILSWG*APSRMEEQLPQGGR Trigger: TCTTCCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR GCA 90 bp | GCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGAAGAAGTTaGCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: APSRMEEQLPQGGRS*LLSLKAPRASIVST Trigger: AGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCTTCCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR GCA 90 bp | GAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATATGGGCCTTaGCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: EHLEGSQVDRLRYGP*PSISSCHGGEHPAG Trigger: TCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR-3UTR GCA 90 bp | TGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCCAGGGTGGAAGAAGTTaGCTGCTTTCCCTCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CPSISSCHGGEHPAGWKSQGGRS*LLSLKA Trigger: TGCCTTGAGGGAAAGCAGGCAACTTCTTCCACCCTG...GCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR CCA 72 bp | AGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTaGAAGAAGTTGCCTGCTTTCCCTCAAGGCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: STQQDGRAAPTG*KKLPAFPQGTK Trigger: CTTGGTGCCTTGAGGGAAAGCAGGCAACTTCTTCCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR CCA 72 bp | ATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATaGAAGAGCAGCTCCCACAGGGTGGAAGAAGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ISSCHGGEHPAG*KSSSHRVEEVA Trigger: GGCAACTTCTTCCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR CCA 72 bp | GCATCTAGAAGGATCACAAGTAGACAGGTTGAGATATaGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGG | + |
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Preference number: 3 (lower is better) Translates to: ASRRITSRQVEI*ALPQHLILSWG Trigger: CCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGGAACGGGATGGGGGCTaGGCCCCTGACTGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWERDGG*APDCCH Trigger: GTGGCAGCAGTCAGGGGCCCAGCCCCCATCCCGTTC...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | TTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAAAGGGCCAGCTCTGGTaGCCTCCGGGTGGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRYGPCPSISSCHGGEHPKGQLW*PPGGSL Trigger: CAGGCTGCCACCCGGAGGGCACCAGAGCTGGCCCTT...TGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGATCCACTTGAGGAGCTaGTGGCCCAGGACCTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWIHLRS*WPRTSS Trigger: GCTAGAGGTCCTGGGCCACCAGCTCCTCAAGTGGAT...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | GATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGACTGCTGCCACTCTGTaGCTTCAGCAGCCAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: DMGLAPASHPVMGVSTQQTAATL*LQQPGA Trigger: GGCGCCTGGCTGCTGAAGCCACAGAGTGGCAGCAGT...CTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGCCAATCAAGACCTCCTaGGGGGCAGTGCTGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWPIKTS*GAVLTV Trigger: CACAGTCAGCACTGCCCCCCAGGAGGTCTTGATTGG...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | CCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGATAGGCCCCAGTGCTTaGGGTTGGGGATGTGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PCPSISSCHGGEHPAGWKIGPSA*GWGCGA Trigger: TGCGCCACATCCCCAACCTCAAGCACTGGGGCCTAT...CTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCAACAGGAAGGCACTaGACTGTGTGGCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: APASHPVMGVSTQQDGRAATGRH*TVWPAP Trigger: TGGAGCAGGCCACACAGTTCAGTGCCTTCCTGTTGC...TGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAAGCCTGAAGAAGAGGTaGAGCCGCTGCCCCGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: APASHPVMGVSTQQDGRASLKKR*SRCPVL Trigger: TAGAACGGGGCAGCGGCTCCACCTCTTCTTCAGGCT...TGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | GGAAGAAGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTTGGGGGCTGGGCCCCTaGCTGCTGCCACTCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRSCLLSLKAPRASIVSTWGLGP*LLPLCG Trigger: GCCACAGAGTGGCAGCAGTCAGGGGCCCAGCCCCCA...AGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACGGCCCACAGGAAGTCTaGGAGCTGCTGCTGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCLLSLKAPRASIVSTVHGPQEV*ELLLLP Trigger: CGGCAGCAGCAGCAGCTCTCAGACTTCCTGTGGGCC...GTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCATCATATAGGCCCCAGTaGTTGAGGTTGGGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: APASHPVMGVSTQQDGRASYRPQ*LRLGMW Trigger: CCACATCCCCAACCTCAAGCACTGGGGCCTATATGA...TGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGGGTTCACTAGGAGATTaGAAGCACCAAATGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWGSLGD*KHQMVC Trigger: GCACACCATTTGGTGCTTCCAATCTCCTAGTGAACC...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | TTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCATTAAGCCAGGGATGCTaGAGGCAGTCGGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LRYGPCPSISSCHGGEHPLSQGC*RQSAAL Trigger: CAGTGCTGCCGACTGCCTCCAGCATCCCTGGCTTAA...TGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCGAGCCCAGGAGTCCCTaGAGCAAACGAGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCEPRSP*SKRGAG Trigger: ACCAGCACCTCGTTTGCTGCAGGGACTCCTGGGCTC...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | TGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCAGCCTCTTCTGTTaGTTCCTTTTGCGCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: CPSISSCHGGEHPAGWKSSSLFC*FLLRLI Trigger: GATGAGGCGCAAAAGGAAGCAACAGAAGAGGCTGCT...GCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCACCAGCTCAAAAGCCATaGATGCTGTGCTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: APASHPVMGVSTQQDGRAPAQKP*MLCSRC Trigger: ACATCTGGAGCACAGCATGCATGGCTTTTGAGCTGG...TGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCCACTTGAGGAGCTGGTaGCCCAGGACCTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCHLRSW*PRTSST Trigger: GGTGCTAGAGGTCCTGGGCCACCAGCTCCTCAAGTG...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | GGATCACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCAGCAGCCAGGCGCCTaGTGTAGGCATCTCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: GSQVDRLRYGPCPSISSCQQPGA*CRHLQH Trigger: GTGTTGGAGATGCCTACATCAGGCGCCTGGCTGCTG...ACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | GATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGATCACCGATCTTCACTaGGTAGTAACCACCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: DMGLAPASHPVMGVSTQQITDLH*VVTTLA Trigger: TGCAAGGGTGGTTACTACCCAGTGAAGATCGGTGAT...CTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGGACCTCTAGCACCATaGATACATGGACTCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: DMGLAPASHPVMGVSTQQGPLAP*IHGLHL Trigger: TAAATGGAGTCCATGTATGCATGGTGCTAGAGGTCC...CTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | AGAAGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCTGGGCCCCTGACTGCTaGCACTCTGTGGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RSCLLSLKAPRASIVSTVWAPDC*HSVASA Trigger: TGCTGAAGCCACAGAGTGGCAGCAGTCAGGGGCCCA...GACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCTGGAGCAGGAAGCCGTaGAGAACAGGGACCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCWSRKP*RTGTLK Trigger: TTTCAGGGTCCCTGTTCTCCACGGCTTCCTGCTCCA...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | AGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACTTGAGGTTGGGGATGTaGCGCAGCTCTCCTCTACGG | + |
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Preference number: 4 (lower is better) Translates to: SCLLSLKAPRASIVSTVHLRLGM*RSSPLR Trigger: CCGTAGAGGAGAGCTGCGCCACATCCCCAACCTCAA...GTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | ACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGAGGAAGTCTGAGAGCTaGTGCTGCTGCCGCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: TSRQVEIWALPQHLILSWRKSES*CCCRHN Trigger: ATTGTGGCGGCAGCAGCAGCAGCTCTCAGACTTCCT...CCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | TTCCCCATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATATGGGGGCTGGGCCCCTGACTaGTGCCACTCTGTGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FPIQEHLEGSQVDRLRYGGWAPD*CHSVAS Trigger: TGAAGCCACAGAGTGGCAGCAGTCAGGGGCCCAGCC...CCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAATGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTCTGAACTGTGTGGCCTaGTCCAGGGGCCACTCATAC | + |
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Preference number: 4 (lower is better) Translates to: GRSCLLSLKAPRASIVSTLNCVA*SRGHSY Trigger: GTATGAGTGGCCCCTGGAGCAGGCCACACAGTTCAG...AGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | AGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACAGCTTTCGCACCACATaGTACCGCCCATTGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: RLRYGPCPSISSCHGGEHSFRTT*YRPLNK Trigger: TTTGTTCAATGGGCGGTACCATGTGGTGCGAAAGCT...GTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCCACATTTCAGGAGCTTaGTCTCATCCACGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCHISGA*SHPRLS Trigger: AGACAGCCGTGGATGAGATCAAGCTCCTGAAATGTG...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCACTCATACTTCTCCATaGGCACCTCATATAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCTHTSP*APHIGP Trigger: GGGGCCTATATGAGGTGCTCATGGAGAAGTATGAGT...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTAAGCCATGCATGCTGTaGTCCAGATGTCAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GRSCLLSLKAPRASIVSTKPCML*SRCQLG Trigger: CCCCAGCTGACATCTGGAGCACAGCATGCATGGCTT...AGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | TTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAAGCACCATGCATACATaGACTCCATTTACTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LRYGPCPSISSCHGGEHPSTMHT*TPFTPE Trigger: CTCAGGAGTAAATGGAGTCCATGTATGCATGGTGCT...TGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | ACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGCTGTACTGCCGAGTCTaGATATCCTCAGTGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSRQVEIWALPQHLILSWLYCRV*ISSVKC Trigger: GCACTTCACTGAGGATATTCAGACTCGGCAGTACAG...CCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GGATCACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTGAAAAACCTGAGGTCTaGGAGCTGGGACTAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GSQVDRLRYGPCPSISSCEKPEV*ELGLRL Trigger: AAGCCTTAGTCCCAGCTCGCAGACCTCAGGTTTTTC...ACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | GGATCACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCTCAGTGTAATGTCCTaGACTCTTCACCACTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: GSQVDRLRYGPCPSISSCLSVMS*TLHHFQ Trigger: CTGAAAGTGGTGAAGAGTGCAGGACATTACACTGAG...ACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACGGCGTTGCCAAGGTCTaGAATCTTGATCTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: SCLLSLKAPRASIVSTVHGVAKV*NLDLDL Trigger: AAGATCAAGATCAAGATTGCAGACCTTGGCAACGCC...GTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | AGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATAGGATTAAGCCAGGGATaGTGGAGGCAGTCGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SFPHSGASRRITSRQVEIGLSQG*WRQSAA Trigger: TGCTGCCGACTGCCTCCAGCATCCCTGGCTTAATCC...TATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CCA 90 bp | TTATTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACTGGTGCCCTCCGGGTaGCAGCCTGAAGAAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLRNKQAVFPIQEHLEGSLVPSG*QPEEEV Trigger: CACCTCTTCTTCAGGCTGCCACCCGGAGGGCACCAG...TGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| 3UTR CAA 72 bp | ATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTaGAGATATGGGCCTTGCCCCAGCATCTCATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: IQEHLEGSQVDR*RYGPCPSISSC Trigger: ACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR TCA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCAAGTCATCGATAAGTTaGACAATGGTCTCCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLSLKAPRASIVSTVHSCKSSIS*TMVSLL Trigger: CAAAAGGGAGACCATTGTTCAACTTATCGATGACTT...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR GCA 90 bp | TTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAAGAGAGCTGCTGCTGCTaGCGCCACAATCCACACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQAVFPIQEHLEGSQESCCC*RHNPHY Trigger: GTAGTGTGGATTGTGGCGGCAGCAGCAGCAGCTCTC...TTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCATCTGAGAGCTGCTGCTaGTGCCGCCACAATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRNKQAVFPIQEHLEGSSESCC*CRHNPH Trigger: GTGTGGATTGTGGCGGCAGCAGCAGCAGCTCTCAGA...TGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCAAGGGGAAGAAGAGGCTaGAGAAGGGCCAGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRNKQAVFPIQEHLEGSRGRRG*RRASSG Trigger: ACCAGAGCTGGCCCTTCTCCAGCCTCTTCTTCCCCT...TGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR TCA 90 bp | TTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAACATGGTACCGCCCATTaGACAAATCACCGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQAVFPIQEHLEGSQHGTAH*TNHRSS Trigger: TGAAGATCGGTGATTTGTTCAATGGGCGGTACCATG...TTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR TCA 90 bp | TTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAAGACTCCATTTACTCCTaGGATCCTGAAGTCATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQAVFPIQEHLEGSQDSIYS*DPEVID Trigger: ATCGATGACTTCAGGATCTCAGGAGTAAATGGAGTC...TTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS GCA 90 bp | CTCTGGTGCCCTCCGGGTGGCAGCCTGAAGAAGAGGTGGAGCCGCTaGCCCGTTCTAGTCTTGAGCTGGAGTCCTCAGCTTGTACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LWCPPGGSLKKRWSR*PVLVLSWSPQLVLR Trigger: CCGCAGTACAAGCTGAGGACTCCAGCTCAAGACTAGAACGGGGCAGCGGCTCCACCTCTTCTTCAGGCTGCCACCCGGAGGGCACCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGTCCTCAGTGAAGTGCTaGTGCACCCAGCAGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWSSVKC*CTQQAL Trigger: CAACGCCTGCTGGGTGCACAAGCACTTCACTGAGGA...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | GATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGCCCCAGTGCTTGAGGTaGGGGATGTGGCGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DMGLAPASHPVMGVSTQQPQCLR*GMWRSS Trigger: AGAGCTGCGCCACATCCCCAACCTCAAGCACTGGGG...CTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGACAATGGTCTCCCTTTaGGGGTCACTAGGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWTMVSL*GSLGSL Trigger: CAGTGACCCTAGTGACCCCAAAAGGGAGACCATTGT...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 90 bp | TACTCGGCACCGATCAGCACCTCCACGGCCCTGTACTGCCGAGTCTaGATATCCTCAGTGAAGTGCTTGTGCACCCAGCAGGCGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSAPISTSTALYCRV*ISSVKCLCTQQALP Trigger: TGGCAACGCCTGCTGGGTGCACAAGCACTTCACTGAGGATATTCAGACTCGGCAGTACAGGGCCGTGGAGGTGCTGATCGGTGCCGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCAGCTCCCACAGGGTGGACACATTTCAGGAGCTaGATCTCATCCACGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVMGVSTQQDGRAAPTGWTHFRS*ISSTAV Trigger: GACAGCCGTGGATGAGATCAAGCTCCTGAAATGTGT...CCACCCTGTGGGAGCTGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CCA 90 bp | CATCATCAGAGCCCAGGAGTCCCTGCAGCAAACGAGGTGCTGGTGTaGCTGGAGTTAATTCAGAGCCTGAGGACTCAGGCCCACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHQSPGVPAANEVLV*LELIQSLRTQAHRK Trigger: CTTCCTGTGGGCCTGAGTCCTCAGGCTCTGAATTAACTCCAGCCACACCAGCACCTCGTTTGCTGCAGGGACTCCTGGGCTCTGATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS TCA 90 bp | GCTGGAGTTAATTCAGAGCCTGAGGACTCAGGCCCACAGGAAGTCTaGGAGCTGCTGCTGCTGCCGCCACAATCCACACTACCACTACCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVNSEPEDSGPQEV*ELLLLPPQSTLPLP Trigger: TGGTAGTGGTAGTGTGGATTGTGGCGGCAGCAGCAGCAGCTCTCAGACTTCCTGTGGGCCTGAGTCCTCAGGCTCTGAATTAACTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCACATGGTACCGCCCATaGAACAAATCACCGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPSISSCHGGEHPAGWKSTWYRP*NKSPIF Trigger: GAAGATCGGTGATTTGTTCAATGGGCGGTACCATGT...GCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACCCAGCAGGATGGAAGAGCACTCATCTTCTTCCTCTaGTTTTTGGACAGCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: APASHPVMGVSTQQDGRALIFFL*FLDSLP Trigger: TGGCAAGCTGTCCAAAAACAAGAGGAAGAAGATGAG...TGCTCTTCCATCCTGCTGGGTGCTCACCCCCATGACAGGATGAGATGCTGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGGGGTGAGCACAGCTCTCCTCTACGGTaGAAGAACTCCCGTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: RLRYGPCPSISSCHGGEHSSPLR*KNSREY Trigger: ATATTCACGGGAGTTCTTCAACCGTAGAGGAGAGCT...GTGCTCACCCCCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 90 bp | AGAAATGGCCCCAGCCTAGCTTTCGCACCACATGGTACCGCCCATTaGACAAATCACCGATCTTCACTGGGTAGTAACCACCCTTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RNGPSLAFAPHGTAH*TNHRSSLGSNHPCN Trigger: ATTGCAAGGGTGGTTACTACCCAGTGAAGATCGGTGATTTGTTCAATGGGCGGTACCATGTGGTGCGAAAGCTAGGCTGGGGCCATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACAGCTGCTTGTTTTTGGACAGCTaGCCAATCAAGACCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSLKAPRASIVSTVHSCLFLDS*PIKTSW Trigger: CCAGGAGGTCTTGATTGGCAAGCTGTCCAAAAACAA...GCAGCTGTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCAGCAGCCTCTTCTGTaGCTTCCTTTTGCGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSCLLSLKAPRASIVSTVQQPLL*LPFAPH Trigger: ATGAGGCGCAAAAGGAAGCAACAGAAGAGGCTGCTG...GACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCCATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATATGGGTGCCCCGTTCTAGTCTaGAGCTGGAGTCCTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FPIQEHLEGSQVDRLRYGCPVLV*SWSPQL Trigger: AAGCTGAGGACTCCAGCTCAAGACTAGAACGGGGCA...CCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAATGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATATATAGGCCCCAGTGCTaGAGGTTGGGGATGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPHSGASRRITSRQVEIYRPQC*RLGMWR Trigger: GCGCCACATCCCCAACCTCAAGCACTGGGGCCTATA...TATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS TCA 90 bp | ACATGGACTCCATTTACTCCTGAGATCCTGAAGTCATCGATAAGTTaGACAATGGTCTCCCTTTTGGGGTCACTAGGGTCACTGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWTPFTPEILKSSIS*TMVSLLGSLGSLSL Trigger: CAGGGACAGTGACCCTAGTGACCCCAAAAGGGAGACCATTGTTCAACTTATCGATGACTTCAGGATCTCAGGAGTAAATGGAGTCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACTTCTTCCTCTTGTTTTaGGACAGCTTGCCAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLLSLKAPRASIVSTVHFFLLF*DSLPIK Trigger: CTTGATTGGCAAGCTGTCCAAAAACAAGAGGAAGAA...GTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCTGCTTTCCCTCAAGGCACCAAGAGCTAGCATAGTCTCTACTGTCCACGAAGTCATCGATAAGTaGAACAATGGTCTCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCLLSLKAPRASIVSTVHEVIDK*NNGLPF Trigger: AAAAGGGAGACCATTGTTCAACTTATCGATGACTTC...GTGGACAGTAGAGACTATGCTAGCTCTTGGTGCCTTGAGGGAAAGCAGGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGTAGACAGGTTGAGATATGGGCCTTGCCCCAGCATCTCATCCTGTCATGGTCTGCAATCTTGATCTaGATCTTGTCTGCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRQVEIWALPQHLILSWSAILI*ILSAFW Trigger: CCAAAATGCAGACAAGATCAAGATCAAGATTGCAGA...CCATGACAGGATGAGATGCTGGGGCAAGGCCCATATCTCAACCTGTCTACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | TTATTAAGAAACAAACAGGCAGTTTTCCCCATTCAGGAGCATCTAGAAGGATCATGCACCCAGCAGGCGTaGCCAAGGTCTGCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRNKQAVFPIQEHLEGSCTQQA*PRSAIL Trigger: CAAGATTGCAGACCTTGGCAACGCCTGCTGGGTGCA...TGATCCTTCTAGATGCTCCTGAATGGGGAAAACTGCCTGTTTGTTTCTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCCCCATTCAGGAGCATCTAGAAGGATCACAAGTAGACAGGTTGAGATAATCTTGATCTTGATCTaGTCTGCATTTTGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPHSGASRRITSRQVEIILILI*SAFWGS Trigger: GGAGCCCCAAAATGCAGACAAGATCAAGATCAAGAT...TATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCCTGAATGGGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS GCA 72 bp | CCTCCGGGTGGCAGCCTGAAGAAGAGGTGGAGCCGCTaGCCCGTTCTAGTCTTGAGCTGGAGTCCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPGGSLKKRWSR*PVLVLSWSPQL Trigger: AAGCTGAGGACTCCAGCTCAAGACTAGAACGGGGCAGCGGCTCCACCTCTTCTTCAGGCTGCCACCCGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS GCA 72 bp | TCAGCTTGTACTGCGGCCTCCATAGCCTCTAGCCTCTaGAAGTCCCTCAGCCGCTCCTCCAGCAGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SACTAASIASSL*KSLSRSSSSLF Trigger: GAAGAGGCTGCTGGAGGAGCGGCTGAGGGACTTGCAGAGGCTAGAGGCTATGGAGGCCGCAGTACAAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS GCA 72 bp | CTGAGGACTCAGGCCCACAGGAAGTCTGAGAGCTGCTaGTGCTGCCGCCACAATCCACACTACCACTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRTQAHRKSESC*CCRHNPHYHYH Trigger: GTGGTAGTGGTAGTGTGGATTGTGGCGGCAGCAGCAGCAGCTCTCAGACTTCCTGTGGGCCTGAGTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 72 bp | CTGAAGAAGAGGTGGAGCCGCTGCCCCGTTCTAGTCTaGAGCTGGAGTCCTCAGCTTGTACTGCGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LKKRWSRCPVLV*SWSPQLVLRPP Trigger: TGGAGGCCGCAGTACAAGCTGAGGACTCCAGCTCAAGACTAGAACGGGGCAGCGGCTCCACCTCTTCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | CCACGGCCCTGTACTGCCGAGTCTGAATATCCTCAGTaGAGTGCTTGTGCACCCAGCAGGCGTTGCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRPCTAESEYPQ*SACAPSRRCQG Trigger: ACCTTGGCAACGCCTGCTGGGTGCACAAGCACTTCACTGAGGATATTCAGACTCGGCAGTACAGGGCCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | CCGATCAGCACCTCCACGGCCCTGTACTGCCGAGTCTaGATATCCTCAGTGAAGTGCTTGTGCACCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PISTSTALYCRV*ISSVKCLCTQQ Trigger: CTGCTGGGTGCACAAGCACTTCACTGAGGATATTCAGACTCGGCAGTACAGGGCCGTGGAGGTGCTGATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | AATTCAGAGCCTGAGGACTCAGGCCCACAGGAAGTCTaGGAGCTGCTGCTGCTGCCGCCACAATCCACACTA | + |
|
Preference number: 6 (lower is better) Translates to: NSEPEDSGPQEV*ELLLLPPQSTL Trigger: TAGTGTGGATTGTGGCGGCAGCAGCAGCAGCTCTCAGACTTCCTGTGGGCCTGAGTCCTCAGGCTCTGAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | CAGGGATGTACTCCATCATGGGCAACAGGAAGGCACTaGACTGTGTGGCCTGCTCCAGGGGCCACTCATACT | + |
|
Preference number: 6 (lower is better) Translates to: QGCTPSWATGRH*TVWPAPGATHT Trigger: AGTATGAGTGGCCCCTGGAGCAGGCCACACAGTTCAGTGCCTTCCTGTTGCCCATGATGGAGTACATCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS GCA 72 bp | ATCATGGGCAACAGGAAGGCACTGAACTGTGTGGCCTaGTCCAGGGGCCACTCATACTTCTCCATGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IMGNRKALNCVA*SRGHSYFSMST Trigger: GGTGCTCATGGAGAAGTATGAGTGGCCCCTGGAGCAGGCCACACAGTTCAGTGCCTTCCTGTTGCCCATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 72 bp | TCCATGAGCACCTCATATAGGCCCCAGTGCTTGAGGTaGGGGATGTGGCGCAGCTCTCCTCTACGGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SMSTSYRPQCLR*GMWRSSPLRLK Trigger: CTTCAACCGTAGAGGAGAGCTGCGCCACATCCCCAACCTCAAGCACTGGGGCCTATATGAGGTGCTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | CCCAGCCTAGCTTTCGCACCACATGGTACCGCCCATTaGACAAATCACCGATCTTCACTGGGTAGTAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSLAFAPHGTAH*TNHRSSLGSNH Trigger: GTGGTTACTACCCAGTGAAGATCGGTGATTTGTTCAATGGGCGGTACCATGTGGTGCGAAAGCTAGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 90 bp | GTGAAGTGCTTGTGCACCCAGCAGGCGTTGCCAAGGTCTGCAATCTaGATCTTGATCTTGTCTGCATTTTGGGGCTCCAGAGGGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VKCLCTQQALPRSAI*ILILSAFWGSRGFT Trigger: AGTGAACCCTCTGGAGCCCCAAAATGCAGACAAGATCAAGATCAAGATTGCAGACCTTGGCAACGCCTGCTGGGTGCACAAGCACTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CCA 72 bp | GTAGAGAAATGGCCCCAGCCTAGCTTTCGCACCACATaGTACCGCCCATTGAACAAATCACCGATCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VEKWPQPSFRTT*YRPLNKSPIFT Trigger: AGTGAAGATCGGTGATTTGTTCAATGGGCGGTACCATGTGGTGCGAAAGCTAGGCTGGGGCCATTTCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 72 bp | CAGGCGTTGCCAAGGTCTGCAATCTTGATCTTGATCTaGTCTGCATTTTGGGGCTCCAGAGGGTTCACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QALPRSAILILI*SAFWGSRGFTR Trigger: CCTAGTGAACCCTCTGGAGCCCCAAAATGCAGACAAGATCAAGATCAAGATTGCAGACCTTGGCAACGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 72 bp | TTGTGCACCCAGCAGGCGTTGCCAAGGTCTGCAATCTaGATCTTGATCTTGTCTGCATTTTGGGGCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LCTQQALPRSAI*ILILSAFWGSR Trigger: TCTGGAGCCCCAAAATGCAGACAAGATCAAGATCAAGATTGCAGACCTTGGCAACGCCTGCTGGGTGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 90 bp | TTGATCTTGTCTGCATTTTGGGGCTCCAGAGGGTTCACTAGGAGATaGGAAGCACCAAATGGTGTGCTAGGAGATAGAAGACCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LILSAFWGSRGFTRR*EAPNGVLGDRRPPV Trigger: GACTGGAGGTCTTCTATCTCCTAGCACACCATTTGGTGCTTCCAATCTCCTAGTGAACCCTCTGGAGCCCCAAAATGCAGACAAGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CCA 72 bp | ATGGTACCGCCCATTGAACAAATCACCGATCTTCACTaGGTAGTAACCACCCTTGCAATAGTCCTTAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MVPPIEQITDLH*VVTTLAIVLRV Trigger: GACCCTAAGGACTATTGCAAGGGTGGTTACTACCCAGTGAAGATCGGTGATTTGTTCAATGGGCGGTACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CAA 72 bp | TCTGCATTTTGGGGCTCCAGAGGGTTCACTAGGAGATaGGAAGCACCAAATGGTGTGCTAGGAGATAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SAFWGSRGFTRR*EAPNGVLGDRR Trigger: TCTTCTATCTCCTAGCACACCATTTGGTGCTTCCAATCTCCTAGTGAACCCTCTGGAGCCCCAAAATGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS CCA 72 bp | AGGTCTGCAATCTTGATCTTGATCTTGTCTGCATTTTaGGGCTCCAGAGGGTTCACTAGGAGATTGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSAILILILSAF*GSRGFTRRLEA Trigger: TGCTTCCAATCTCCTAGTGAACCCTCTGGAGCCCCAAAATGCAGACAAGATCAAGATCAAGATTGCAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
||
| CDS TCA 72 bp | CCATTTACTCCTGAGATCCTGAAGTCATCGATAAGTTaGACAATGGTCTCCCTTTTGGGGTCACTAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PFTPEILKSSIS*TMVSLLGSLGS Trigger: TGACCCTAGTGACCCCAAAAGGGAGACCATTGTTCAACTTATCGATGACTTCAGGATCTCAGGAGTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002081.6 |
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