Pregenerated sensors for SRPK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004865Ensembl transcript IDs: ENSMUST00000004987.17, ENSMUST00000114767.3, ENSMUST00000130643.9, ENSMUST00000232751.2, ENSMUST00000233129.2, ENSMUST00000233353.2, ENSMUST00000233794.2
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCCAGGGCTCCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTaGCCGAATGCTCTCCTCCAGCTGGGTGATGTCCTGTCGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VQGSIGLLLIPRRCI*PNALLQLGDVLSGE Trigger: CTCACCCGACAGGACATCACCCAGCTGGAGGAGAGCATTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR TCA 90 bp | TGCCCGAATGCTCTCCTCCAGCTGGGTGATGTCCTGTCGGGTGAGTaGCTGCTCTGCAGAGGATTGGCACACCATGGTCTCAGAGGCCGT | + |
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Preference number: 1 (lower is better) Translates to: CPNALLQLGDVLSGE*LLCRGLAHHGLRGR Trigger: ACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCTGGAGGAGAGCATTCGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR GCA 90 bp | CGAATGCTCTCCTCCAGCTGGGTGATGTCCTGTCGGGTGAGTGACTaGTCTGCAGAGGATTGGCACACCATGGTCTCAGAGGCCGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RMLSSSWVMSCRVSD*SAEDWHTMVSEAVG Trigger: ACCCACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCTGGAGGAGAGCATTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR GCA 90 bp | ACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGCTTTTaGGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TNCSAKLRSPQKGSF*ACLLPLSQVLWLLK Trigger: CTTGAGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | CAGAGCTGTCTGGGAAGGCCTTGGAATGTGGGAGGGAACACTCCCTaGACAGGGCAGCTCAGAAACCTTCGTCTCCTGTCTGGATCACCC | + |
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Preference number: 1 (lower is better) Translates to: QSCLGRPWNVGGNTP*TGQLRNLRLLSGSP Trigger: GGGTGATCCAGACAGGAGACGAAGGTTTCTGAGCTGCCCTGTTCAGGGAGTGTTCCCTCCCACATTCCAAGGCCTTCCCAGACAGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR CCA 90 bp | GTGACTGCTCTGCAGAGGATTGGCACACCATGGTCTCAGAGGCCGTaGGTGTGCAAGAGTCTGTGTCTTGAGATGGACTGCTGTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: VTALQRIGTPWSQRP*VCKSLCLEMDCCLH Trigger: ATGGAGACAGCAGTCCATCTCAAGACACAGACTCTTGCACACCCACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR TCA 90 bp | AGCCTCTCCTCCCCTTGGCTCCTCACCCAGGATCTCAAAGGCCTCTaGGAAATGAGAACAGCACAGCCACATGGAGAAACTGAGTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLSSPWLLTQDLKGL*EMRTAQPHGETESR Trigger: CCTTGACTCAGTTTCTCCATGTGGCTGTGCTGTTCTCATTTCTCAGAGGCCTTTGAGATCCTGGGTGAGGAGCCAAGGGGAGGAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR GCA 90 bp | GCTCTGCAGAGGATTGGCACACCATGGTCTCAGAGGCCGTGGGTGTaGAAGAGTCTGTGTCTTGAGATGGACTGCTGTCTCCATTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: ALQRIGTPWSQRPWV*KSLCLEMDCCLHLK Trigger: CTTCAAATGGAGACAGCAGTCCATCTCAAGACACAGACTCTTGCACACCCACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR TCA 90 bp | AAAGGAAGTCAGGACTGGAACTCAGGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGACCATGGAGGGATGTTCTTTACTGGCTTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: KGSQDWNSGRSGSRS*CRDHGGMFFTGLLP Trigger: GGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGACCTGCCTGAGTTCCAGTCCTGACTTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR GCA 90 bp | AAAGACCGATACTGCCGTGTCTGGATATCTTCAGTGAAATGCTTGTaGACCCAGCAGGCGTTCCCGAGGTCTGCGATCTTCACTTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: KDRYCRVWISSVKCL*TQQAFPRSAIFTWS Trigger: GCTCCAAGTGAAGATCGCAGACCTCGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACGGCAGTATCGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR CCA 90 bp | GAACACTCCCTGAACAGGGCAGCTCAGAAACCTTCGTCTCCTGTCTaGATCACCCCAAAGCTCGTTACAAGACAGTCAGTCCATTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: EHSLNRAAQKPSSPV*ITPKLVTRQSVHSS Trigger: GCTTGAATGGACTGACTGTCTTGTAACGAGCTTTGGGGTGATCCAGACAGGAGACGAAGGTTTCTGAGCTGCCCTGTTCAGGGAGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | AGTTCCTCAGGTGAAGTTGATGAGTTACAGGAAGCTGCTTGCTGGTaGGCCAATCATGAGGGTGACTCTCCAGTCTTCCACACAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSSGEVDELQEAACW*ANHEGDSPVFHTGR Trigger: CCTTCCTGTGTGGAAGACTGGAGAGTCACCCTCATGATTGGCTCACCAGCAAGCAGCTTCCTGTAACTCATCAACTTCACCTGAGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | CACACCATGGTCTCAGAGGCCGTGGGTGTGCAAGAGTCTGTGTCTTaGGATGGACTGCTGTCTCCATTTGAAGAGTTTAGGAAACTAGGT | + |
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Preference number: 1 (lower is better) Translates to: HTMVSEAVGVQESVS*DGLLSPFEEFRKLG Trigger: ACCTAGTTTCCTAAACTCTTCAAATGGAGACAGCAGTCCATCTCAAGACACAGACTCTTGCACACCCACGGCCTCTGAGACCATGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR CCA 90 bp | GATGCAGAGACCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTaGCTTGCTCAGCTTGCTTTCTTTAGAACCAATACTACCAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: DAETMEGCSLLACFP*LAQLAFFRTNTTSP Trigger: TGGGCTGGTAGTATTGGTTCTAAAGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGTCTCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR GCA 90 bp | TTCCAGAGTGCTATAATCAAGACCCACTTGGTCCTTGCTAAAATCTaGAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGT | + |
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Preference number: 1 (lower is better) Translates to: FQSAIIKTHLVLAKI*KQLSRDPNPVLLMR Trigger: ACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGATTTTAGCAAGGACCAAGTGGGTCTTGATTATAGCACTCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | GGCAAAGCTCCAGGAGGGCCTTCTAAATGGGAGGACAGACTGAAATaGCTGTTCTTACGGCAACACAGGACACAGAAAAGGACTATTTCA | + |
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Preference number: 1 (lower is better) Translates to: GKAPGGPSKWEDRLK*LFLRQHRTQKRTIS Trigger: TGAAATAGTCCTTTTCTGTGTCCTGTGTTGCCGTAAGAACAGTCATTTCAGTCTGTCCTCCCATTTAGAAGGCCCTCCTGGAGCTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | AAAACTCTTTCTACAGGAACAAGTCTGGTTCCAGATAACCAAGCATaGGCCAATGAATGGCTGGCCAGTTCCTCAGGTGAAGTTGATGAG | + |
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Preference number: 1 (lower is better) Translates to: KTLSTGTSLVPDNQA*ANEWLASSSGEVDE Trigger: CTCATCAACTTCACCTGAGGAACTGGCCAGCCATTCATTGGCTCATGCTTGGTTATCTGGAACCAGACTTGTTCCTGTAGAAAGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR TCA 90 bp | TGCCTGGAACCTACACGGGGAAGGACAGAGCTAACTTCTAAATGTTaGTCTCTGACATATACATTCACATGCACAGTGTATGTTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CLEPTRGRTELTSKC*SLTYTFTCTVYVHP Trigger: AGGGTGAACATACACTGTGCATGTGAATGTATATGTCAGAGATCAACATTTAGAAGTTAGCTCTGTCCTTCCCCGTGTAGGTTCCAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR GCA 90 bp | GATGGACTGCTGTCTCCATTTGAAGAGTTTAGGAAACTAGGTTCCTaGTTCAAAGTGTGGACATCACAGTCATTAGCATTATGCAGATCC | + |
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Preference number: 1 (lower is better) Translates to: DGLLSPFEEFRKLGS*FKVWTSQSLALCRS Trigger: GGATCTGCATAATGCTAATGACTGTGATGTCCACACTTTGAAGCAGGAACCTAGTTTCCTAAACTCTTCAAATGGAGACAGCAGTCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR GCA 90 bp | CTAGGTTCCTGCTTCAAAGTGTGGACATCACAGTCATTAGCATTATaGAGATCCTCTTTATGCCTCAGTGTCTCATTATTACTGTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LGSCFKVWTSQSLAL*RSSLCLSVSLLLFS Trigger: TGAGAACAGTAATAATGAGACACTGAGGCATAAAGAGGATCTGCATAATGCTAATGACTGTGATGTCCACACTTTGAAGCAGGAACCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR CCA 90 bp | TCTCCATTTGAAGAGTTTAGGAAACTAGGTTCCTGCTTCAAAGTGTaGACATCACAGTCATTAGCATTATGCAGATCCTCTTTATGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SPFEEFRKLGSCFKV*TSQSLALCRSSLCL Trigger: GAGGCATAAAGAGGATCTGCATAATGCTAATGACTGTGATGTCCACACTTTGAAGCAGGAACCTAGTTTCCTAAACTCTTCAAATGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR TCA 90 bp | CATTCACATGCACAGTGTATGTTCACCCTAGACCATATGAAGCATTaGATATCTGCTAAGTATGTGACATCTACACATATTCACCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSHAQCMFTLDHMKH*ISAKYVTSTHIHLP Trigger: TGGCAGGTGAATATGTGTAGATGTCACATACTTAGCAGATATTCAATGCTTCATATGGTCTAGGGTGAACATACACTGTGCATGTGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR TCA 90 bp | CAAAAACAACAGACTCAAGATTCCAGGAACTTAGTTGTGAGAAGATaGGAGGGATCCAACAATACTTTCAACAGTGATAAAATGGTACCC | + |
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Preference number: 1 (lower is better) Translates to: QKQQTQDSRNLVVRR*EGSNNTFNSDKMVP Trigger: GGGTACCATTTTATCACTGTTGAAAGTATTGTTGGATCCCTCTCATCTTCTCACAACTAAGTTCCTGGAATCTTGAGTCTGTTGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGGGAGGGAACACTCCCTaGACAGGGCAGCTCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: WPLWHQLLGQAQEPTEGQGGNTP*TGQLRN Trigger: GTTTCTGAGCTGCCCTGTTCAGGGAGTGTTCCCTCC...CTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR CAA 90 bp | CACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGCTTTaGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HQLLGQAQEPTEGQL*RLSPSTLPGSLAPQ Trigger: TTGAGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTAAGGAGAGGGAAGTTTaGGGGGTGGGCTGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QQSIRETWPLWHQLLGQAKEREV*GVGWRE Trigger: TTCCCTCCAGCCCACCCCTCAAACTTCCCTCTCCTT...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR GCA 90 bp | CCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCCCGAATGCTCTCCTCCTGTCGGGTGAGTGACTaGTCTGCAGAGGATTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PLGSCSSPEGVSARMLSSCRVSD*SAEDWH Trigger: GTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACA...GGAGGAGAGCATTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTAGACTCAGCTGGGCGTaGTGGCACACGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPRLSWA*WHTPLI Trigger: GATTAAAGGCGTGTGCCACCACGCCCAGCTGAGTCT...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTACAGGAAGGAGGCAGTaGTGCGTTTCAGTGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QQSIRETWPLWHQLLGQATGRRQ*CVSVSL Trigger: CAAGCTCACTGAAACGCACCACTGCCTCCTTCCTGT...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGTGAAATGCTTGTGCACCCAGCAGGCGTTCCCGAGGTCTGCGATCTTCGTCCTGTCGGGTGAGTaGCTGCTCTGCAGAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: SSVKCLCTQQAFPRSAIFVLSGE*LLCRGL Trigger: CAATCCTCTGCAGAGCAGTCACTCACCCGACAGGAC...GAAGATCGCAGACCTCGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCCAAGCATGAGCCAATaGATGGCTGGCCAGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SLTRSQQQSIRETWPLWHPSMSQ*MAGQFL Trigger: GAGGAACTGGCCAGCCATTCATTGGCTCATGCTTGG...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTGAAGGCCTTGGAATGTaGGAGGGAACACTCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RDPNPVLLMRARFTPGTCEGLGM*EGTLPE Trigger: TTCAGGGAGTGTTCCCTCCCACATTCCAAGGCCTTC...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTGATCTCAAAGGCCTCTaGGAAATGAGAACAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPDLKGL*EMRTAQ Trigger: CTGTGCTGTTCTCATTTCTCAGAGGCCTTTGAGATC...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAATTTTCCTTTGCTGTCCAGGGCTCCATTGGGCTCCTGCTCATCCCCAGACAGAGGCCGTGGGTGTaGAAGAGTCTGTGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: REFSFAVQGSIGLLLIPRQRPWV*KSLCLE Trigger: CTCAAGACACAGACTCTTGCACACCCACGGCCTCTG...TCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTCAAATTCACCTAGGATaGCCAATGGCCGTGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPQIHLG*PMAVGI Trigger: AATTCCCACGGCCATTGGGCATCCTAGGTGAATTTG...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTCACACTTTTAGTCTTTaGCAGAGCCCAACCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RDPNPVLLMRARFTPGTCHTFSL*QSPTKA Trigger: GGCCTTGGTTGGGCTCTGCCAAAGACTAAAAGTGTG...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR CAA 90 bp | ACAAGTATATGCAGGCAGGTGAGATGGCTCGGTAGGTCTGGGCTCTaGCTACCAGGCTTGAGGCACCAAGTTCAATGCCTGGAACCTACA | + |
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Preference number: 2 (lower is better) Translates to: TSICRQVRWLGRSGL*LPGLRHQVQCLEPT Trigger: TGTAGGTTCCAGGCATTGAACTTGGTGCCTCAAGCCTGGTAGCAAGAGCCCAGACCTACCGAGCCATCTCACCTGCCTGCATATACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTGAGCTGTTTCCAGAGTaGTATAATCAAGACCCACTT | + |
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Preference number: 2 (lower is better) Translates to: QQSIRETWPLWHQLLGQAELFPE*YNQDPL Trigger: AAGTGGGTCTTGATTATAGCACTCTGGAAACAGCTC...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR CAA 90 bp | CTCCAGCGGTGTCAAGTTGACACAAAACTAGCCAGTACAACCAGGTaGGCCTCAAACTCAAAAATCCACCTGCCTCTGCCTCTCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LQRCQVDTKLASTTR*ASNSKIHLPLPLKG Trigger: GCCCTTGAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGGTTGTACTGGCTAGTTTTGTGTCAACTTGACACCGCTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| 3UTR-3UTR TCA 90 bp | CCGATACTGCCGTGTCTGGATATCTTCAGTGAAATGCTTGTGCACCCAGCAGGCCAAGAGTCTGTGTCTTaGGATGGACTGCTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PILPCLDIFSEMLVHPAGQESVS*DGLLSP Trigger: TGGAGACAGCAGTCCATCTCAAGACACAGACTCTTG...GCCTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACGGCAGTATCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR CAA 90 bp | ACCAAGCATGAGCCAATGAATGGCTGGCCAGTTCCTCAGGTGAAGTaGATGAGTTACAGGAAGCTGCTTGCTGGTGAGCCAATCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: TKHEPMNGWPVPQVK*MSYRKLLAGEPIMR Trigger: CCTCATGATTGGCTCACCAGCAAGCAGCTTCCTGTAACTCATCAACTTCACCTGAGGAACTGGCCAGCCATTCATTGGCTCATGCTTGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACACAACTGAGATTTGCTaGGAAGGAGTTTCAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SLTRSQQQSIRETWPLWHTTEIC*EGVSGR Trigger: CCTACCTGAAACTCCTTCTCAGCAAATCTCAGTTGT...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| 3UTR-3UTR GCA 90 bp | CCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCCCGAATGCTCTCCTCCCAGTCATTAGCATTATaGAGATCCTCTTTATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGSCSSPEGVSARMLSSQSLAL*RSSLCL Trigger: GAGGCATAAAGAGGATCTGCATAATGCTAATGACTG...GGAGGAGAGCATTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR GCA 90 bp | GCCACTCATATTTCTCCACCAGAACCTCCAGAAGACCCCAAGGCTTCAACTTGGCAGAGAATTTTCCTTTaGTGTCCAGGGCTCCATTGG | + |
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Preference number: 2 (lower is better) Translates to: ATHISPPEPPEDPKASTWQRIFL*CPGLHW Trigger: CCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTG...CCAAGTTGAAGCCTTGGGGTCTTCTGGAGGTTCTGGTGGAGAAATATGAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR CCA 90 bp | CGTGTCTGGATATCTTCAGTGAAATGCTTGTGCACCCAGCAGGCGTTCCCGAGGTCCTGCTTCAAAGTGTaGACATCACAGTCATTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RVWISSVKCLCTQQAFPRSCFKV*TSQSLA Trigger: TGCTAATGACTGTGATGTCCACACTTTGAAGCAGGA...CCTCGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCGATGCCCAATGGCCGTaGGAATTTCCACAGGATCAA | + |
|
Preference number: 2 (lower is better) Translates to: RLATLAFSKLETELFPECDAQWP*EFPQDQ Trigger: TTGATCCTGTGGAAATTCCCACGGCCATTGGGCATC...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAGTATATGCAGGCAGGTaGGATGGCTCGGTAGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IQLTTPHCCSSPKEVRTGVYAGR*DGSVGL Trigger: CAGACCTACCGAGCCATCTCACCTGCCTGCATATAC...TCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCCAACAGGAAAACGATTaGGAAAAGTGCCAGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RLATLAFSKLETELFPECQQEND*EKCQPL Trigger: GAGAGGCTGGCACTTTTCTCAATCGTTTTCCTGTTG...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCGAAAGAGCTTTGCCCTaGAAAAGGAGAGGGAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RLATLAFSKLETELFPECERALP*KRRGKF Trigger: AAACTTCCCTCTCCTTTTTCAGGGCAAAGCTCTTTC...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAAGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAATGTCACTGTGGAGGCTaGGGCAGGAAGATCACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RKGFIQLTTPHCCSSPKECHCGG*GRKITP Trigger: TGGGGTGATCTTCCTGCCTCAGCCTCCACAGTGACA...TTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGACTTATGTCTGGAATGAGGTTCCAGGTTCTACCCCCATTAAAATTTCCGTGCACGAGAAAGTGTaGCTCTCAGAGTCAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GGTYVWNEVPGSTPIKISVHEKV*LSESVN Trigger: ATTCACTGACTCTGAGAGTCACACTTTCTCGTGCAC...GGAAATTTTAATGGGGGTAGAACCTGGAACCTCATTCCAGACATAAGTCCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAACCAATACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCGACCATATGAAGCATTaGATATCTGCTAAGTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRTNTTSPEMVPPTRGLSDHMKH*ISAKYV Trigger: CACATACTTAGCAGATATTCAATGCTTCATATGGTC...GGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTATTGGTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR GCA 90 bp | CACCAGAACCTCCAGAAGACCCCAAGGCTTCAACTTGGTGATGTGCTTCAGGTCTGCAGATCCTCTTTATaGCTCAGTGTCTCATTATTA | + |
|
Preference number: 2 (lower is better) Translates to: HQNLQKTPRLQLGDVLQVCRSSL*LSVSLL Trigger: TAATAATGAGACACTGAGGCATAAAGAGGATCTGCA...GACCTGAAGCACATCACCAAGTTGAAGCCTTGGGGTCTTCTGGAGGTTCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGGGATTAAAGGTGTGTaGCACCACTGCCCGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RKGFIQLTTPHCCSSPKEGIKGV*HHCPAS Trigger: AGAAGCCGGGCAGTGGTGGCACACACCTTTAATCCC...TTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCTTTAGAACCAATACTACCAGCCGAAAATTCAACTACTTaGAAAGCGGTTGGAGAAACG | + |
|
Preference number: 2 (lower is better) Translates to: LASPGLLSLLSLEPILPAENSTT*KAVGET Trigger: CGTTTCTCCAACCGCTTTTCAAGTAGTTGAATTTTC...GGCTGGTAGTATTGGTTCTAAAGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCCCACAACTGAGATTTGCTGAGAAGGAGTTTCAGGTAGGTCTGCTATTGAAGGCCTCTGAGAAATaGGAACAGCACAGCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: IIPQLRFAEKEFQVGLLLKASEK*EQHSHM Trigger: CATGTGGCTGTGCTGTTCTCATTTCTCAGAGGCCTT...CAATAGCAGACCTACCTGAAACTCCTTCTCAGCAAATCTCAGTTGTGGGATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGTAATCGTGTCACTGTaGAGGCTGAGGCAGGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RVYSAYNSTLLFITKGSQVIVSL*RLRQED Trigger: ATCTTCCTGCCTCAGCCTCCACAGTGACACGATTAC...CTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCCCACAACTGAGATTTGCTGAGAAGGAGTTTCAGGTAGGTCTGCTATTGGCCACATGGAGAAACTaGGTCAAGGCCAGAATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IIPQLRFAEKEFQVGLLLATWRN*VKARIL Trigger: TAGAATTCTGGCCTTGACTCAGTTTCTCCATGTGGC...CAATAGCAGACCTACCTGAAACTCCTTCTCAGCAAATCTCAGTTGTGGGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAATGTTCTTTACTGGCTTaGTTCCCCTGGCTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RKGFIQLTTPHCCSSPKECSLLA*FPWLAQ Trigger: CTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACA...TTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTAAAACCAGACTCAGCTaGGCGTGGTGGCACACGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFKTRLS*AWWHTP Trigger: AGGCGTGTGCCACCACGCCCAGCTGAGTCTGGTTTT...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAAGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAACCCTTGATCACTAATTaGGAAAATGCCTTCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RKGFIQLTTPHCCSSPKEPLITN*ENAFQL Trigger: CAGCTGGAAGGCATTTTCTCAATTAGTGATCAAGGG...TTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACATATACATTCACATaGACAGTGTATGTTCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: IQLTTPHCCSSPKEVRTGTYTFT*TVYVHP Trigger: AGGGTGAACATACACTGTGCATGTGAATGTATATGT...TCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTGACTCTCAGAGTCAGTaGATAAAGAGGATGGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFDSQSQ*IKRMDG Trigger: CCCATCCATCCTCTTTATTCACTGACTCTGAGAGTC...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTATTTCACAACACCTGAGGCTCCCAGTAACTGAAATTCACTGGTTCTCTTTTTTAGTTGTGAGAAGATaGGAGGGATCCAACAATACT | + |
|
Preference number: 2 (lower is better) Translates to: TISQHLRLPVTEIHWFSFLVVRR*EGSNNT Trigger: AGTATTGTTGGATCCCTCTCATCTTCTCACAACTAA...AAAAGAGAACCAGTGAATTTCAGTTACTGGGAGCCTCAGGTGTTGTGAAATAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CAA 90 bp | CCATTAAAATTTCCCATGGAGTCAATGATTAAAACAGACCTGCTGTaGGCTTGTGTTTCTTGGTTAGGTCACCTTAATGTCACTAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: PLKFPMESMIKTDLL*ACVSWLGHLNVTRI Trigger: AATCCTAGTGACATTAAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGACTCCATGGGAAATTTTAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTGAGGCTCCCAGTAACTaGAATTCACTGGTTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFEAPSN*NSLVLF Trigger: AAAGAGAACCAGTGAATTTCAGTTACTGGGAGCCTC...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | AGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTaGTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPSGRPGLYGTN*SAKLRSPQKGS Trigger: GCTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | TCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGCTTTTaGGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SAKLRSPQKGSF*ACLLPLSQVLW Trigger: CCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | GCTCTCCTCCAGCTGGGTGATGTCCTGTCGGGTGAGTaGCTGCTCTGCAGAGGATTGGCACACCATGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALLQLGDVLSGE*LLCRGLAHHGL Trigger: GAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCTGGAGGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR GCA 72 bp | TCCTCCAGCTGGGTGATGTCCTGTCGGGTGAGTGACTaGTCTGCAGAGGATTGGCACACCATGGTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSWVMSCRVSD*SAEDWHTMVSE Trigger: CTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCTGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR GCA 72 bp | TCCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTaGCCGAATGCTCTCCTCCAGCTGGGTGATGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SIGLLLIPRRCI*PNALLQLGDVL Trigger: CAGGACATCACCCAGCTGGAGGAGAGCATTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CCA 72 bp | ATGTCCTGTCGGGTGAGTGACTGCTCTGCAGAGGATTaGCACACCATGGTCTCAGAGGCCGTGGGTGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: MSCRVSDCSAED*HTMVSEAVGVQ Trigger: TTGCACACCCACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CCA 72 bp | CCAGAAGGTGTATCTGCCCGAATGCTCTCCTCCAGCTaGGTGATGTCCTGTCGGGTGAGTGACTGCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PEGVSARMLSSS*VMSCRVSDCSA Trigger: TGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCTGGAGGAGAGCATTCGGGCAGATACACCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CCA 72 bp | TTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTaGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTRSQQQSIRET*PLWHQLLGQAQ Trigger: CTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGGTGATGTCCTGTCGGGTGAGTGACTGCTCTGCAGAGGATTGGCACACCGCAAGAGTCTGTGTCTaGAGATGGACTGCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SWVMSCRVSDCSAEDWHTARVCV*RWTAVS Trigger: GGAGACAGCAGTCCATCTCAAGACACAGACTCTTGC...GGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR TCA 72 bp | CTGGGAAGGCCTTGGAATGTGGGAGGGAACACTCCCTaGACAGGGCAGCTCAGAAACCTTCGTCTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGRPWNVGGNTP*TGQLRNLRLLS Trigger: AGACAGGAGACGAAGGTTTCTGAGCTGCCCTGTTCAGGGAGTGTTCCCTCCCACATTCCAAGGCCTTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | TCTTCCACACAGGAAGGAGGCAGTGGTGCGTTTCAGTaGGCTTGCTTAGGGGAGCCTAGGCTTGCGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSTQEGGSGAFQ*ACLGEPRLATL Trigger: CAGAGTCGCAAGCCTAGGCTCCCCTAAGCAAGCTCACTGAAACGCACCACTGCCTCCTTCCTGTGTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CCA 72 bp | CTGCAGAGGATTGGCACACCATGGTCTCAGAGGCCGTaGGTGTGCAAGAGTCTGTGTCTTGAGATGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQRIGTPWSQRP*VCKSLCLEMDC Trigger: GCAGTCCATCTCAAGACACAGACTCTTGCACACCCACGGCCTCTGAGACCATGGTGTGCCAATCCTCTGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CCA 72 bp | ACAGAATCCACAGCCCTCCCCTCCTCAATCTTGTGCTaGCGGCGGATGTGCACGAGAAAGTGTGACTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TESTALPSSILC*RRMCTRKCDSQ Trigger: CTGAGAGTCACACTTTCTCGTGCACATCCGCCGCCAGCACAAGATTGAGGAGGGGAGGGCTGTGGATTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 |
||
| 3UTR CCA 72 bp | AGGCAGGTCAGGAAGCAGGAGCTGATGCAGAGACCATaGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQVRKQELMQRP*RDVLYWLASPG Trigger: GCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGACCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR GCA 72 bp | AGGATTGGCACACCATGGTCTCAGAGGCCGTGGGTGTaGAAGAGTCTGTGTCTTGAGATGGACTGCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RIGTPWSQRPWV*KSLCLEMDCCL Trigger: GAGACAGCAGTCCATCTCAAGACACAGACTCTTGCACACCCACGGCCTCTGAGACCATGGTGTGCCAATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTCTCAAGGGCTGGGATTAAAGGTGTGTaGCACCACTGCCCGGCTTCTGGCACAAAACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CLCLSRAGIKGV*HHCPASGTKLL Trigger: TAAGAGTTTTGTGCCAGAAGCCGGGCAGTGGTGGCACACACCTTTAATCCCAGCCCTTGAGAGGCAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CCA 72 bp | CAGCAGAGAATTTTCCTTTGCTGTCCAGGGCTCCATTaGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QQRIFLCCPGLH*APAHPQKVYLP Trigger: GGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTGTTCCTCAGGTGAAGTaGATGAGTTACAGGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPVPQVK*MSYRKL Trigger: CAGCTTCCTGTAACTCATCAACTTCACCTGAGGAAC...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | CCAAAGACCGATACTGCCGTGTCTGGATATCTTCAGTaGAATGCTTGTGCACCCAGCAGGCGTTCCCGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PKTDTAVSGYLQ*NACAPSRRSRG Trigger: ACCTCGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACGGCAGTATCGGTCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR GCA 72 bp | TACTGCCGTGTCTGGATATCTTCAGTGAAATGCTTGTaGACCCAGCAGGCGTTCCCGAGGTCTGCGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YCRVWISSVKCL*TQQAFPRSAIF Trigger: GAAGATCGCAGACCTCGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACGGCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR GCA 72 bp | CCAGGTTGGCCTCAAACTCAAAAATCCACCTGCCTCTaGCTCTCAAGGGCTGGGATTAAAGGTGTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPQTQKSTCL*LSRAGIKGVCH Trigger: GTGGCACACACCTTTAATCCCAGCCCTTGAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CCA 72 bp | TTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTaGCTCCTCAAGCAGCAAGGAGAAAGCCCTTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FCACLLPLSQVL*LLKQQGESPYL Trigger: CAGATAAGGGCTTTCTCCTTGCTGCTTGAGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTACAACCAGGTTGGCCTCAAACTCAAAAATCCACCTGCCTCTGCCTCTCCTCTTGCTACCAGGCTaGAGGCACCAAGTTCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ASTTRLASNSKIHLPLPLLLLPG*RHQVQC Trigger: GCATTGAACTTGGTGCCTCAAGCCTGGTAGCAAGAG...GAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGGTTGTACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CCA 72 bp | GAGCTGATGCAGAGACCATGGAGGGATGTTCTTTACTaGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQRPWRDVLY*LASPGLLSLLS Trigger: AGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGTCTCTGCATCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTCATATTTCTCCACCAGAACCTCCAGAAGACCCCAAGGCTTCAACTTGGGCAGAGAATTTTCCTTaGCTGTCCAGGGCTCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ATHISPPEPPEDPKASTWAENFP*LSRAPL Trigger: CAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTGC...CCAAGTTGAAGCCTTGGGGTCTTCTGGAGGTTCTGGTGGAGAAATATGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR TCA 72 bp | CCAAAGCTCGTTACAAGACAGTCAGTCCATTCAAGCTaGGCAGGCAAAGCTCCAGGAGGGCCTTCTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: PKLVTRQSVHSS*AGKAPGGPSKW Trigger: CCATTTAGAAGGCCCTCCTGGAGCTTTGCCTGCTCAGCTTGAATGGACTGACTGTCTTGTAACGAGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | GTACAACCAGGTTGGCCTCAAACTCAAAAATCCACCTaGCTCTGCCTCTCAAGGGCTGGGATTAAAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VQPGWPQTQKST*LCLSRAGIKGV Trigger: CACACCTTTAATCCCAGCCCTTGAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGGTTGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR TCA 72 bp | AATCTTGTGCTGGCGGCGGATGTGCACGAGAAAGTGTaGCTCTCAGAGTCAGTGAATAAAGAGGATGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: NLVLAADVHEKV*LSESVNKEDGW Trigger: CCATCCATCCTCTTTATTCACTGACTCTGAGAGTCACACTTTCTCGTGCACATCCGCCGCCAGCACAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | CCAGGAGGGCCTTCTAAATGGGAGGACAGACTGAAATaGCTGTTCTTACGGCAACACAGGACACAGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGGPSKWEDRLK*LFLRQHRTQKR Trigger: CCTTTTCTGTGTCCTGTGTTGCCGTAAGAACAGTCATTTCAGTCTGTCCTCCCATTTAGAAGGCCCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | AAGCTCCAGGAGGGCCTTCTAAATGGGAGGACAGACTaGAATGACTGTTCTTACGGCAACACAGGACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLQEGLLNGRTD*NDCSYGNTGHR Trigger: TCTGTGTCCTGTGTTGCCGTAAGAACAGTCATTTCAGTCTGTCCTCCCATTTAGAAGGCCCTCCTGGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | GATGCAGAGACCATGGAGGGATGTTCTTTACTGGCTTaGTTCCCCTGGCTTGCTCAGCTTGCTTTCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: DAETMEGCSLLA*FPWLAQLAFFR Trigger: TCTAAAGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGTCTCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CCA 72 bp | CCTATCAGGACTTCCAAAGACCGATACTGCCGTGTCTaGATATCTTCAGTGAAATGCTTGTGCACCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PIRTSKDRYCRV*ISSVKCLCTQQ Trigger: CTGCTGGGTGCACAAGCATTTCACTGAAGATATCCAGACACGGCAGTATCGGTCTTTGGAAGTCCTGATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CCA 72 bp | TCTGCTTTTAAAACAAGTATATGCAGGCAGGTGAGATaGCTCGGTAGGTCTGGGCTCTTGCTACCAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SAFKTSICRQVR*LGRSGLLLPGL Trigger: CAAGCCTGGTAGCAAGAGCCCAGACCTACCGAGCCATCTCACCTGCCTGCATATACTTGTTTTAAAAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR TCA 72 bp | CGGATGTGCACGAGAAAGTGTGACTCTCAGAGTCAGTaGATAAAGAGGATGGATGGGCTCACAGATCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RMCTRKCDSQSQ*IKRMDGLTDLH Trigger: GTGAAGATCTGTGAGCCCATCCATCCTCTTTATTCACTGACTCTGAGAGTCACACTTTCTCGTGCACATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | GTTTGTCTGCTTTTAAAACAAGTATATGCAGGCAGGTaGGATGGCTCGGTAGGTCTGGGCTCTTGCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: VCLLLKQVYAGR*DGSVGLGSCYQ Trigger: CTGGTAGCAAGAGCCCAGACCTACCGAGCCATCTCACCTGCCTGCATATACTTGTTTTAAAAGCAGACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR TCA 72 bp | TCTACAGGAACAAGTCTGGTTCCAGATAACCAAGCATaGGCCAATGAATGGCTGGCCAGTTCCTCAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: STGTSLVPDNQA*ANEWLASSSGE Trigger: TTCACCTGAGGAACTGGCCAGCCATTCATTGGCTCATGCTTGGTTATCTGGAACCAGACTTGTTCCTGTAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | GCTATAATCAAGACCCACTTGGTCCTTGCTAAAATCTaGAAGCAGCTGTCACGTGACCCCAATCCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AIIKTHLVLAKI*KQLSRDPNPVL Trigger: AAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGATTTTAGCAAGGACCAAGTGGGTCTTGATTATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CCA 72 bp | TGGTTCCAGATAACCAAGCATGAGCCAATGAATGGCTaGCCAGTTCCTCAGGTGAAGTTGATGAGTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: WFQITKHEPMNG*PVPQVKLMSYR Trigger: CCTGTAACTCATCAACTTCACCTGAGGAACTGGCCAGCCATTCATTGGCTCATGCTTGGTTATCTGGAACCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTTATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGTTCCAGCTGGATCTCTaGGAGGCATTTCCCCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RVYSAYNSTLLFITKGSQFQLDL*EAFPQL Trigger: CAGTTGGGGAAATGCCTCCAAGAGATCCAGCTGGAA...CTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCATAATCAAGACCCACTaGGTCCTTGCTAAAATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RLATLAFSKLETELFPECIIKTH*VLAKIC Trigger: GCAGATTTTAGCAAGGACCAAGTGGGTCTTGATTAT...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CCA 72 bp | ACCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTaGCTTGCTCAGCTTGCTTTCTTTAGAACCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: TMEGCSLLACFP*LAQLAFFRTNT Trigger: AGTATTGGTTCTAAAGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCAGCTTACAACTCCACATTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGFIQLTTPH*CSSPKEVRTGT Trigger: AGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR TCA 72 bp | CCTACACGGGGAAGGACAGAGCTAACTTCTAAATGTTaGTCTCTGACATATACATTCACATGCACAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PTRGRTELTSKC*SLTYTFTCTVY Trigger: ATACACTGTGCATGTGAATGTATATGTCAGAGATCAACATTTAGAAGTTAGCTCTGTCCTTCCCCGTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CCA 72 bp | GAAGAGTTTAGGAAACTAGGTTCCTGCTTCAAAGTGTaGACATCACAGTCATTAGCATTATGCAGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEFRKLGSCFKV*TSQSLALCRSS Trigger: AGAGGATCTGCATAATGCTAATGACTGTGATGTCCACACTTTGAAGCAGGAACCTAGTTTCCTAAACTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTGCTGTAAGATTTCCCTGCCGTTATGTGATGTCATCTGCTCTCTTTATTTGGTACCCAAACTGGTaGCTCATCGAAAAATGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KTAVRFPCRYVMSSALFIWYPNW*LIEKCS Trigger: GCTACATTTTTCGATGAGCAACCAGTTTGGGTACCA...AATAAAGAGAGCAGATGACATCACATAACGGCAGGGAAATCTTACAGCAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR GCA 72 bp | AACCCAGAGTGGATTAAAACTGCTGTAAGATTTCCCTaGCGTTATGTGATGTCATCTGCTCTCTTTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NPEWIKTAVRFP*RYVMSSALFIL Trigger: AAGAATAAAGAGAGCAGATGACATCACATAACGGCAGGGAAATCTTACAGCAGTTTTAATCCACTCTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CCA 72 bp | GAGAGGGATCCAACAATACTTTCAACAGTGATAAAATaGTACCCAAACTGGTTGCTCATCGAAAAATGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ERDPTILSTVIK*YPNWLLIEKCS Trigger: GCTACATTTTTCGATGAGCAACCAGTTTGGGTACCATTTTATCACTGTTGAAAGTATTGTTGGATCCCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | CAGACTCAAGATTCCAGGAACTTAGTTGTGAGAAGATaGGAGGGATCCAACAATACTTTCAACAGTGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QTQDSRNLVVRR*EGSNNTFNSDK Trigger: TTTATCACTGTTGAAAGTATTGTTGGATCCCTCTCATCTTCTCACAACTAAGTTCCTGGAATCTTGAGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR TCA 72 bp | GCACAGTGTATGTTCACCCTAGACCATATGAAGCATTaGATATCTGCTAAGTATGTGACATCTACACATATT | + |
|
Preference number: 3 (lower is better) Translates to: AQCMFTLDHMKH*ISAKYVTSTHI Trigger: AATATGTGTAGATGTCACATACTTAGCAGATATTCAATGCTTCATATGGTCTAGGGTGAACATACACTGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGCCGGCAGCCTCCTCCTaGGGCCACTCATATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WPLWHQLLGQAQEPTEGQPAASS*GHSYFS Trigger: GGAGAAATATGAGTGGCCTCAGGAGGAGGCTGCCGG...CTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTATGTCGCTCTCGGAGTaGGGTGCAGAGCCTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPMSLSE*GAEPRC Trigger: GCACCGAGGCTCTGCACCCCACTCCGAGAGCGACAT...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGCCCTGAAAAAGGAGAGGGAAGTTTGAGGGGTGGGCTGGAGGGAAGGTCCGCTCTCGGAGTGGGGTaGAGAGCCTCGGTGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCPEKGEGSLRGGLEGRSALGVG*RASVLS Trigger: ACTCAGCACCGAGGCTCTGCACCCCACTCCGAGAGC...GGACCTTCCCTCCAGCCCACCCCTCAAACTTCCCTCTCCTTTTTCAGGGCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGCAGAGGCCGTGGGTGTaGAAGAGTCTGTGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WPLWHQLLGQAQEPTEGQQRPWV*KSLCLE Trigger: CTCAAGACACAGACTCTTGCACACCCACGGCCTCTG...CTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCTTTTCTTTCGGGCCTaGAGCGCGAGCACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QQSIRETWPLWHQLLGQALFFRA*SASTFR Trigger: GCGGAAAGTGCTCGCGCTCCAGGCCCGAAAGAAAAG...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACAGCGCTGCCACTCTGTaGCCTCTGCAGCCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSQQQSIRETWPLWHSAATL*PLQPAF Trigger: GAAGGCTGGCTGCAGAGGCCACAGAGTGGCAGCGCT...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTGCAGAGCCTCGGTGCTaGGTTTCAGGCTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDPNPVLLMRARFTPGTCAEPRC*VSGFLW Trigger: CCAAAGGAAGCCTGAAACTCAGCACCGAGGCTCTGC...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTCCACTCTGTGGCCTCTaGAGCCAGCCTTCGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPPLCGL*SQPSNV Trigger: TACATTCGAAGGCTGGCTGCAGAGGCCACAGAGTGG...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGAACCTCCAGAAGACCCCAAGGCTTCAACTTGGTGATGTGCTTCAGGTCAGCGCTGCCACTCTGTaGCCTCTGCAGCCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQNLQKTPRLQLGDVLQVSAATL*PLQPAF Trigger: GAAGGCTGGCTGCAGAGGCCACAGAGTGGCAGCGCT...GACCTGAAGCACATCACCAAGTTGAAGCCTTGGGGTCTTCTGGAGGTTCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTGGCCTCAAACTCAAAAATCCACCTGCCTCTGCCTCTCAAGGGCTGGGCTTTTCTTTCGGGCCTaGAGCGCGAGCACTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGWPQTQKSTCLCLSRAGLFFRA*SASTFR Trigger: GCGGAAAGTGCTCGCGCTCCAGGCCCGAAAGAAAAG...CCCAGCCCTTGAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACTGTCCAGGGCTCCATTaGGCTCCTGCTCATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSQQQSIRETWPLWHCPGLH*APAHPQ Trigger: CTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACA...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CAA 72 bp | TGCAGGCAGGTGAGATGGCTCGGTAGGTCTGGGCTCTaGCTACCAGGCTTGAGGCACCAAGTTCAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRQVRWLGRSGL*LPGLRHQVQCL Trigger: CAGGCATTGAACTTGGTGCCTCAAGCCTGGTAGCAAGAGCCCAGACCTACCGAGCCATCTCACCTGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACGTCCTGTCGGGTGAGTaGCTGCTCTGCAGAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSQQQSIRETWPLWHVLSGE*LLCRGL Trigger: CAATCCTCTGCAGAGCAGTCACTCACCCGACAGGAC...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCTCCTCCTGAGGCCACTCATATTTCTCCACCAGAACCTCCAGAAGACCCCACTCTGTGGCCTCTaGAGCCAGCCTTCGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLLRPLIFLHQNLQKTPLCGL*SQPSNV Trigger: TACATTCGAAGGCTGGCTGCAGAGGCCACAGAGTGG...GGTCTTCTGGAGGTTCTGGTGGAGAAATATGAGTGGCCTCAGGAGGAGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTATTGCAATTAATCTCTaGCGCACCACCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QQSIRETWPLWHQLLGQAIAINL*RTTLST Trigger: GGTGGAGAGGGTGGTGCGCCAGAGATTAATTGCAAT...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCATTTTCCTGCCACAATaGGCTTGCGAGGCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICKQLSRDPNPVLLMRARIFLPQ*ACEAPS Trigger: GGAAGGTGCCTCGCAAGCTCATTGTGGCAGGAAAAT...GCGTGCACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCTCCTCCTGAGGCCACTCATATTTCTCCACCAGAACCTCCAGAAGACCCGCTCCGTGAGTGTCTaGTCCTGGCCAATGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLLRPLIFLHQNLQKTRSVSV*SWPMEF Trigger: AAATTCCATTGGCCAGGACCAGACACTCACGGAGCG...GGTCTTCTGGAGGTTCTGGTGGAGAAATATGAGTGGCCTCAGGAGGAGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CAA 72 bp | CCAGCAGAGAATTTTCCTTTGCTGTCCAGGGCTCCATaGGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAENFPLLSRAP*GSCSSPEGVSA Trigger: GGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTGTCAACAGGACTCTCTaGTTCTTCTTGCTTGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQSIRETWPLWHQLLGQAVNRTL*FFLLVR Trigger: CCTAACAAGCAAGAAGAATCAGAGAGTCCTGTTGAC...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTTCTGGATATCTTCAGTaGAATGCTTGTGCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPSGYLQ*NACAPS Trigger: GCTGGGTGCACAAGCATTTCACTGAAGATATCCAGA...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGCAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCAAAGGCCATGCATaGTGTGCTCCAGATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICKQLSRDPNPVLLMRARFKGHA*CAPDVS Trigger: GCTGACATCTGGAGCACAGCATGCATGGCCTTTGAA...GCGTGCACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGGGCTCCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCCCGAAGTGAGTGTCTGGTCCTaGCCAATGGAATTTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPGLHWAPAHPQKVYLPEVSVWS*PMEFDS Trigger: AGAGTCAAATTCCATTGGCCAGGACCAGACACTCAC...TTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCTCCTCCTGAGGCCACTCATATTTCTCCACCAGAACCTCCAGAAGACCATTGCAATTAATCTCTaGCGCACCACCCTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLLRPLIFLHQNLQKTIAINL*RTTLST Trigger: GGTGGAGAGGGTGGTGCGCCAGAGATTAATTGCAAT...GGTCTTCTGGAGGTTCTGGTGGAGAAATATGAGTGGCCTCAGGAGGAGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCTGGCCAATGGAATTTaGCTCTTCAAGTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQSIRETWPLWHQLLGQALANGI*LFKFLL Trigger: CAAGAGAAACTTGAAGAGTCAAATTCCATTGGCCAG...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTTGTGTAATCCTCCCCTaGATGAGGCTCAAACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QQSIRETWPLWHQLLGQACVILP*MRLKQI Trigger: TATTTGTTTGAGCCTCATTCAGGGGAGGATTACACA...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGAATTCTAGGCAAGGCAGGAAAGCTGTGGATGGAAGCAGAGCTGTCTGGGTCCCCAGAAGTTCTATaGTCAGGGCGATGTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARILGKAGKLWMEAELSGSPEVL*SGRCGL Trigger: AAGACCACATCGCCCTGATCATAGAACTTCTGGGGA...CCCAGACAGCTCTGCTTCCATCCACAGCTTTCCTGCCTTGCCTAGAATTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CAA 72 bp | GAGCCAATGAATGGCTGGCCAGTTCCTCAGGTGAAGTaGATGAGTTACAGGAAGCTGCTTGCTGGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPMNGWPVPQVK*MSYRKLLAGEP Trigger: TGGCTCACCAGCAAGCAGCTTCCTGTAACTCATCAACTTCACCTGAGGAACTGGCCAGCCATTCATTGGCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCATCCACTTGAGTAGATaGTGCCCCAAAACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ICKQLSRDPNPVLLMRARIHLSR*CPKTSN Trigger: GTTTGAGGTTTTGGGGCATCATCTACTCAAGTGGAT...GCGTGCACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGTGATGTCCTGTCGGGTGAGTGACTGCTCTGCAGAGGATTGGCACACCAGCCTTCGAATGTACTaGTCATTCACAGACAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWVMSCRVSDCSAEDWHTSLRMY*SFTDNK Trigger: CTTGTTGTCTGTGAATGAGCAGTACATTCGAAGGCT...GGTGTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACAGGACATCACCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR CCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACGTGAGTGTCTGGTCCTaGCCAATGGAATTTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSQQQSIRETWPLWHVSVWS*PMEFDS Trigger: AGAGTCAAATTCCATTGGCCAGGACCAGACACTCAC...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGTACAACCAGGTTGGCCTCAAACTCAAAAATCCACCTGCCTCTGCCTCTCTGTCCTTCTTGGCCTTaGTCCTTTTCTTTCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTTRLASNSKIHLPLPLCPSWP*SFSFGP Trigger: AGGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACA...GAGAGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGGTTGTACTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACGGGCTTTGTCCTTCTTaGCCTTGGTCCTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTRSQQQSIRETWPLWHGLCPS*PWSFSF Trigger: GAAAGAAAAGGACCAAGGCCAAGAAGGACAAAGCCC...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | CACATGGAGAAACTGAGTCAAGGCCAGAATTCTAGGCAAGGCAGGAAAGCTGTGAGCTGGCTTAGGCTGTaGAGCAGTGCTGACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HMEKLSQGQNSRQGRKAVSWLRL*SSADCR Trigger: TCTGCAGTCAGCACTGCTCCACAGCCTAAGCCAGCT...CACAGCTTTCCTGCCTTGCCTAGAATTCTGGCCTTGACTCAGTTTCTCCATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGGGCTCCATTGGGCTCCTGCTCATCCCCAGAAGGTGTATCTGCCCGAAACAAACTTCTTTCCCTaGATATCCCATGATAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPGLHWAPAHPQKVYLPETNFFP*ISHDNH Trigger: GTGGTTATCATGGGATATTCAGGGAAAGAAGTTTGT...TTCGGGCAGATACACCTTCTGGGGATGAGCAGGAGCCCAATGGAGCCCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTACAAACTTCTTTCCCTaGATATCCCATGATAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPTNFFP*ISHDNH Trigger: GTGGTTATCATGGGATATTCAGGGAAAGAAGTTTGT...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTAGCCTTCGAATGTACTaGTCATTCACAGACAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDPNPVLLMRARFTPGTCSLRMY*SFTDNK Trigger: CTTGTTGTCTGTGAATGAGCAGTACATTCGAAGGCT...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAGGAGCCCACAGAAGGGCAGATTTCCTCAATTTCCTaGATTCGCTTCTCTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: WPLWHQLLGQAQEPTEGQISSIS*IRFSSN Trigger: ATTACTAGAGAAGCGAATGCAGGAAATTGAGGAAAT...CTGCCCTTCTGTGGGCTCCTGAGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCGAGTTTAGCCAAGGATaGCGGAGACACTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLATLAFSKLETELFPECEFSQG*RRHSAA Trigger: TGCTGCTGAGTGTCTCCGGCATCCTTGGCTAAACTC...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCCGCTCCGTGAGTGTCTaGTCCTGGCCAATGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLATLAFSKLETELFPECRSVSV*SWPMEF Trigger: AAATTCCATTGGCCAGGACCAGACACTCACGGAGCG...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTTCTGGTCCTGGCCAATaGAATTTGACTCTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDPNPVLLMRARFTPGTCSGPGQ*NLTLQV Trigger: AACTTGAAGAGTCAAATTCCATTGGCCAGGACCAGA...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTTCCTGCTTCAAAGTGTaGACATCACAGTCATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDPNPVLLMRARFTPGTCSCFKV*TSQSLA Trigger: TGCTAATGACTGTGATGTCCACACTTTGAAGCAGGA...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGAATTCTAGGCAAGGCAGGAAAGCTGTGGATGGAAGCAGAGCTGTCTGGGCGATACTGCCGTGTCTaGATATCTTCAGTGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARILGKAGKLWMEAELSGRYCRV*ISSVKC Trigger: GCATTTCACTGAAGATATCCAGACACGGCAGTATCG...CCCAGACAGCTCTGCTTCCATCCACAGCTTTCCTGCCTTGCCTAGAATTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCCAAGAGTCTGTGTCTTaGGATGGACTGCTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLATLAFSKLETELFPECQESVS*DGLLSP Trigger: TGGAGACAGCAGTCCATCTCAAGACACAGACTCTTG...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR TCA 90 bp | ATAATCCCACAACTGAGATTTGCTGAGAAGGAGTTTCAGGTAGGTCTGCTATTGGCAGCAGGAAATCTGTaGAGCCGGCAGCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIPQLRFAEKEFQVGLLLAAGNL*SRQPPP Trigger: AGGAGGAGGCTGCCGGCTTCACAGATTTCCTGCTGC...CAATAGCAGACCTACCTGAAACTCCTTCTCAGCAAATCTCAGTTGTGGGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGCCCTGAAAAAGGAGAGGGAAGTTTGAGGGGTGGGCTGGAGGGAAGGTCCCAGTCATTAGCATTATaGAGATCCTCTTTATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPEKGEGSLRGGLEGRSQSLAL*RSSLCL Trigger: GAGGCATAAAGAGGATCTGCATAATGCTAATGACTG...GGACCTTCCCTCCAGCCCACCCCTCAAACTTCCCTCTCCTTTTTCAGGGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCTGTCCTTCTTGGCCTTaGTCCTTTTCTTTCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLATLAFSKLETELFPECCPSWP*SFSFGP Trigger: AGGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACA...GCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGCAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | GCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCTATAATTGTCGGGTGAGTGACTaGTCTGCAGAGGATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATLAFSKLETELFPECYNCRVSD*SAEDWH Trigger: GTGCCAATCCTCTGCAGAGCAGTCACTCACCCGACA...ATTATAGCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | GCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCTATAATTCAGTGAAATGCTTGTaGACCCAGCAGGCGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATLAFSKLETELFPECYNSVKCL*TQQAFP Trigger: CGGGAACGCCTGCTGGGTGCACAAGCATTTCACTGA...ATTATAGCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAGGCAGGTCAGGAAGGGGCTTTGTCCTTCTTaGCCTTGGTCCTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IAVHHQRKSGLELRQVRKGLCPS*PWSFSF Trigger: GAAAGAAAAGGACCAAGGCCAAGAAGGACAAAGCCC...CTTCCTGACCTGCCTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR CCA 90 bp | TGGACATCACAGTCATTAGCATTATGCAGATCCTCTTTATGCCTCAGTGTCTCACTTTGGCTTAGGCTGTaGAGCAGTGCTGACTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WTSQSLALCRSSLCLSVSLWLRL*SSADCR Trigger: TCTGCAGTCAGCACTGCTCCACAGCCTAAGCCAAAG...TGAGACACTGAGGCATAAAGAGGATCTGCATAATGCTAATGACTGTGATGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| 3UTR CAA 72 bp | TGTCAAGTTGACACAAAACTAGCCAGTACAACCAGGTaGGCCTCAAACTCAAAAATCCACCTGCCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQVDTKLASTTR*ASNSKIHLPLP Trigger: AGGCAGAGGCAGGTGGATTTTTGAGTTTGAGGCCAACCTGGTTGTACTGGCTAGTTTTGTGTCAACTTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CAA 72 bp | TGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTaGCTCAGCTTGCTTTCTTTAGAACCAATACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLASPG*LSLLSLEPILP Trigger: TGGTAGTATTGGTTCTAAAGAAAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| 3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCAGCTTACAACTCCACATaGCTGTTCATCACCAAAGGAAGTCAGGACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEERVYSAYNST*LFITKGSQDWN Trigger: GTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAATAAACCCTTTCCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR TCA 90 bp | ATCAGGACTTCCAAAGACCGATACTGCCGTGTCTGGATATCTTCAGTGAAATGCATCCACTTGAGTAGATaGTGCCCCAAAACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRTSKDRYCRVWISSVKCIHLSR*CPKTSN Trigger: GTTTGAGGTTTTGGGGCATCATCTACTCAAGTGGAT...GCATTTCACTGAAGATATCCAGACACGGCAGTATCGGTCTTTGGAAGTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
||
| CDS-3UTR GCA 90 bp | GCGACTCTGGCTTTCTCCAAGTTAGAAACTGAGCTGTTTCCAGAGTGCTATAATCAGAGAATTTTCCTTTaGTGTCCAGGGCTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATLAFSKLETELFPECYNQRIFL*CPGLHW Trigger: CCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTG...ATTATAGCACTCTGGAAACAGCTCAGTTTCTAACTTGGAGAAAGCCAGAGTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | CACATGGAGAAACTGAGTCAAGGCCAGAATTCTAGGCAAGGCAGGAAAGCTGTGTGCAGATCCTCTTTATaGCTCAGTGTCTCATTATTA | + |
|
Preference number: 4 (lower is better) Translates to: HMEKLSQGQNSRQGRKAVCRSSL*LSVSLL Trigger: TAATAATGAGACACTGAGGCATAAAGAGGATCTGCA...CACAGCTTTCCTGCCTTGCCTAGAATTCTGGCCTTGACTCAGTTTCTCCATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | TCAATGATTAAAACAGACCTGCTGTTGGCTTGTGTTTCTTGGTTAGGTCACCTTATATCTTCAGTGAAATaGTTGTGCACCCAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SMIKTDLLLACVSWLGHLISSVK*LCTQQA Trigger: CGCCTGCTGGGTGCACAAGCATTTCACTGAAGATAT...AAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | TCAATGATTAAAACAGACCTGCTGTTGGCTTGTGTTTCTTGGTTAGGTCACCTTTCTGCCTGGCGCTTCTaGTTCTTCTTCAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMIKTDLLLACVSWLGHLSAWRF*FFFNFF Trigger: GAAGAAATTGAAGAAGAAGCAGAAGCGCCAGGCAGA...AAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | TCAATGATTAAAACAGACCTGCTGTTGGCTTGTGTTTCTTGGTTAGGTCACCTTCTTTACAGTAGTCATTaGGGTCTTCCTGCTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMIKTDLLLACVSWLGHLLYSSH*GLPARH Trigger: ATGACGAGCAGGAAGACCCCAATGACTACTGTAAAG...AAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CCA 90 bp | ACTATTTCACAACACCTGAGGCTCCCAGTAACTGAAATTCACTGGTTCTCTTTTTCTAGTAATTCTGCCTaGCGCTTCTGCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TISQHLRLPVTEIHWFSFSSNSA*RFCFFF Trigger: GAAGAAGAAGCAGAAGCGCCAGGCAGAATTACTAGA...AAAAGAGAACCAGTGAATTTCAGTTACTGGGAGCCTCAGGTGTTGTGAAATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| 3UTR CAA 72 bp | TTTCCCATGGAGTCAATGATTAAAACAGACCTGCTGTaGGCTTGTGTTTCTTGGTTAGGTCACCTTAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPMESMIKTDLL*ACVSWLGHLNV Trigger: GACATTAAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGACTCCATGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR GCA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTCTTGGAGTATTTTCCTaGCACAATGAGCTTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFLGVFS*HNELAR Trigger: CCTCGCAAGCTCATTGTGGCAGGAAAATACTCCAAG...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS GCA 90 bp | GCAGTGCTGACTGCAGACCCCGATGGTGGGGGAGCTCCTGAGCGCTaGCACTCTGTGGCCTCTGCAGCCAGCCTTCGAATGTACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVLTADPDGGGAPER*HSVASAASLRMYCS Trigger: TGAGCAGTACATTCGAAGGCTGGCTGCAGAGGCCACAGAGTGGCAGCGCTCAGGAGCTCCCCCACCATCGGGGTCTGCAGTCAGCACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000233129.2 ENSMUST00000233353.2 |
||
| CDS CCA 90 bp | CTGCAGACCCCGATGGTGGGGGAGCTCCTGAGCGCTGCCACTCTGTaGCCTCTGCAGCCAGCCTTCGAATGTACTGCTCATTCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LQTPMVGELLSAATL*PLQPAFECTAHSQT Trigger: TGTCTGTGAATGAGCAGTACATTCGAAGGCTGGCTGCAGAGGCCACAGAGTGGCAGCGCTCAGGAGCTCCCCCACCATCGGGGTCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 ENSMUST00000233353.2 |
||
| CDS CCA 90 bp | GCCCAGAGAGCAGAAGTGAACACAGGAGCACTGTGTCATACTTACTaGCTTAGGCTGTGGAGCAGTGCTGACTGCAGACCCCGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQRAEVNTGALCHTY*LRLWSSADCRPRWW Trigger: CCACCATCGGGGTCTGCAGTCAGCACTGCTCCACAGCCTAAGCCAGTAAGTATGACACAGTGCTCCTGTGTTCACTTCTGCTCTCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233129.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCGGCTTCCTTTGGGCTTaGTCCTTCTTGGCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ICKQLSRDPNPVLLMRARGFLWA*SFLALV Trigger: GACCAAGGCCAAGAAGGACAAAGCCCAAAGGAAGCC...GCGTGCACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAAGCAGCTGTCACGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTGTCCTTCTTGGCCTaGGTCCTTTTCTTTCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICKQLSRDPNPVLLMRARLSFLA*VLFFRA Trigger: GGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACAA...GCGTGCACGCATCAGAAGGACAGGATTGGGGTCACGTGACAGCTGCTTGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACCAACTGCTCGGCCAAGCTCAACCATTTCTCCATTaGGATCATTCGGGTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QQSIRETWPLWHQLLGQAQPFLH*DHSGLS Trigger: ACTCAGACCCGAATGATCCAAATGGAGAAATGGTTG...AGCTTGGCCGAGCAGTTGGTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGAACCAATACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCGGGTTCCTTTGGGCTTaGTCCTTCTTGGCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FRTNTTSPEMVPPTRGLSGFLWA*SFLALV Trigger: GACCAAGGCCAAGAAGGACAAAGCCCAAAGGAACCC...GGAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTATTGGTTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
||
| CDS-3UTR CAA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTAGTTTCAGGCTTCCTTaGGGCTTTGTCCTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDPNPVLLMRARFTPGTCSFRLP*GFVLLG Trigger: GCCAAGAAGGACAAAGCCCAAAGGAAGCCTGAAACT...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCCTGAAAAAGGAGAGGGAAGTTTGAGGGGTGGGCTGGAGGGAAGGTCCCTTGTTAGGTCTTTTTaGCCCAGGGCCCGACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LCPEKGEGSLRGGLEGRSLVRSF*PRARLF Trigger: AAAGAGTCGGGCCCTGGGCAAAAAAGACCTAACAAG...GGACCTTCCCTCCAGCCCACCCCTCAAACTTCCCTCTCCTTTTTCAGGGCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
||
| CDS CCA 90 bp | TTAATCTCTGGCGCACCACCCTCTCCACCACGCTCCGTGAGTGTCTaGTCCTGGCCAATGGAATTTGACTCTTCAAGTTTCTCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LISGAPPSPPRSVSV*SWPMEFDSSSFSWV Trigger: GACCCAAGAGAAACTTGAAGAGTCAAATTCCATTGGCCAGGACCAGACACTCACGGAGCGTGGTGGAGAGGGTGGTGCGCCAGAGATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
||
| CDS CCA 90 bp | CTCAGGGTAATTAACGACTCCAATCACTCCATTGCAATTAATCTCTaGCGCACCACCCTCTCCACCACGCTCCGTGAGTGTCTGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVINDSNHSIAINL*RTTLSTTLRECLVL Trigger: CAGGACCAGACACTCACGGAGCGTGGTGGAGAGGGTGGTGCGCCAGAGATTAATTGCAATGGAGTGATTGGAGTCGTTAATTACCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGCAGCTTTTGCGCCTGTCTCCTTCCACTCTCCCAGGTTCTCTGGCTCCTGTCTGCGATCTTCACTaGGAGCTTCTCTGCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: EGQLLRLSPSTLPGSLAPVCDLH*ELLCIF Trigger: AAAAATGCAGAGAAGCTCCAAGTGAAGATCGCAGAC...AGGAGCCAGAGAACCTGGGAGAGTGGAAGGAGACAGGCGCAAAAGCTGCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS CCA 90 bp | TCTGGCGCACCACCCTCTCCACCACGCTCCGTGAGTGTCTGGTCCTaGCCAATGGAATTTGACTCTTCAAGTTTCTCTTGGGTCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: SGAPPSPPRSVSVWS*PMEFDSSSFSWVIL Trigger: TAAAATGACCCAAGAGAAACTTGAAGAGTCAAATTCCATTGGCCAGGACCAGACACTCACGGAGCGTGGTGGAGAGGGTGGTGCGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS-3UTR CAA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTCCTGGCCAATGGAATTaGACTCTTCAAGTTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RDPNPVLLMRARFTPGTCPGQWN*TLQVSL Trigger: AAGAGAAACTTGAAGAGTCAAATTCCATTGGCCAGG...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | TCTTTAACCAGGAGCCAACAGCAGTCCATCAGGGAGACCTGGCCTCTATGGCACACTCCAATCACTCCATaGCAATTAATCTCTGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: SLTRSQQQSIRETWPLWHTPITP*QLISGA Trigger: TGCGCCAGAGATTAATTGCAATGGAGTGATTGGAGT...GTGCCATAGAGGCCAGGTCTCCCTGATGGACTGCTGTTGGCTCCTGGTTAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | CGTGACCCCAATCCTGTCCTTCTGATGCGTGCACGCTTCACCCCAGGAACATGTCTCTTCAAGTTTCTCTaGGGTCATTTTATTAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RDPNPVLLMRARFTPGTCLFKFL*GHFIRW Trigger: CCACCTAATAAAATGACCCAAGAGAAACTTGAAGAG...ACATGTTCCTGGGGTGAAGCGTGCACGCATCAGAAGGACAGGATTGGGGTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGCAGAGAATTTTCCTTTGCTGTCCAGGGCTCCATTGGGCTCCTGCTCATCAACCATTTCTCCATTaGGATCATTCGGGTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: FQQRIFLCCPGLHWAPAHQPFLH*DHSGLS Trigger: ACTCAGACCCGAATGATCCAAATGGAGAAATGGTTG...ATGAGCAGGAGCCCAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTGCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| CDS-3UTR CAA 90 bp | ATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAAGAGCCAGGGTTCCTTaGGGCTTTGTCCTTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: IQLTTPHCCSSPKEVRTGRARVP*GFVLLG Trigger: GCCAAGAAGGACAAAGCCCAAAGGAACCCTGGCTCT...TCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| CDS-3UTR CAA 90 bp | GCCAGAATTCTAGGCAAGGCAGGAAAGCTGTGGATGGAAGCAGAGCTGTCTGGGTTATTCTTTGACATTTaGTCAGCTGGCTTAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ARILGKAGKLWMEAELSGLFFDI*SAGLGC Trigger: ACAGCCTAAGCCAGCTGACAAAATGTCAAAGAATAA...CCCAGACAGCTCTGCTTCCATCCACAGCTTTCCTGCCTTGCCTAGAATTCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | ATTCAGCTTACAACTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGATTGTCCTTCTTGGCCTaGGTCCTTTTCTTTCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: IQLTTPHCCSSPKEVRTGLSFLA*VLFFRA Trigger: GGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACAA...TCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAGTTGTAAGCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| CDS TCA 90 bp | TGCCTGGCGCTTCTGCTTCTTCTTCAATTTCTTCTTCTTATTCTTTaGCATTTTGTCAGCTGGCTTAGGCTGTGGAGCAGTGCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: CLALLLLLQFLLLIL*HFVSWLRLWSSADC Trigger: GCAGTCAGCACTGCTCCACAGCCTAAGCCAGCTGACAAAATGTCAAAGAATAAGAAGAAGAAATTGAAGAAGAAGCAGAAGCGCCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 |
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| CDS-3UTR CAA 90 bp | TCAATGATTAAAACAGACCTGCTGTTGGCTTGTGTTTCTTGGTTAGGTCACCTTGCAAGAGTCTGTGTCTaGAGATGGACTGCTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SMIKTDLLLACVSWLGHLARVCV*RWTAVS Trigger: GGAGACAGCAGTCCATCTCAAGACACAGACTCTTGC...AAGGTGACCTAACCAAGAAACACAAGCCAACAGCAGGTCTGTTTTAATCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTTCTTCAGTGAAATGCTaGTGCACCCAGCAGGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFSSVKC*CTQQAF Trigger: GAACGCCTGCTGGGTGCACAAGCATTTCACTGAAGA...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS-3UTR CAA 90 bp | TTAGATGTCAATACAGTTGACAACCCAGAGTGGATTAAAACTGCTGTAAGATTTGCAGAGAATTTTCCTTaGCTGTCCAGGGCTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: LDVNTVDNPEWIKTAVRFAENFP*LSRAPL Trigger: CAATGGAGCCCTGGACAGCAAAGGAAAATTCTCTGC...AAATCTTACAGCAGTTTTAATCCACTCTGGGTTGTCAACTGTATTGACATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130643.9 |
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| CDS CCA 90 bp | TCCATTTCCTCAATTTCCTGCATTCGCTTCTCTAGTAATTCTGCCTaGCGCTTCTGCTTCTTCTTCAATTTCTTCTTCTTATTCTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: SISSISCIRFSSNSA*RFCFFFNFFFLFFD Trigger: GTCAAAGAATAAGAAGAAGAAATTGAAGAAGAAGCAGAAGCGCCAGGCAGAATTACTAGAGAAGCGAATGCAGGAAATTGAGGAAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS TCA 90 bp | ATATGTGTTCCATTAACGCCTGATATTTTAAAGTCATCTAGTAGTTaGACAACCATTTCTCCATTTGGATCATTCGGGTCTGAGTTGCGA | + |
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Preference number: 5 (lower is better) Translates to: ICVPLTPDILKSSSS*TTISPFGSFGSELR Trigger: TCGCAACTCAGACCCGAATGATCCAAATGGAGAAATGGTTGTTCAACTACTAGATGACTTTAAAATATCAGGCGTTAATGGAACACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 |
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| CDS GCA 90 bp | TCAATTTCCTGCATTCGCTTCTCTAGTAATTCTGCCTGGCGCTTCTaGTTCTTCTTCAATTTCTTCTTCTTATTCTTTGACATTTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SISCIRFSSNSAWRF*FFFNFFFLFFDILS Trigger: TGACAAAATGTCAAAGAATAAGAAGAAGAAATTGAAGAAGAAGCAGAAGCGCCAGGCAGAATTACTAGAGAAGCGAATGCAGGAAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 |
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| CDS CCA 72 bp | CCGATGGTGGGGGAGCTCCTGAGCGCTGCCACTCTGTaGCCTCTGCAGCCAGCCTTCGAATGTACTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PMVGELLSAATL*PLQPAFECTAH Trigger: ATGAGCAGTACATTCGAAGGCTGGCTGCAGAGGCCACAGAGTGGCAGCGCTCAGGAGCTCCCCCACCATCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 ENSMUST00000233353.2 |
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| CDS GCA 72 bp | CTCCTCCTGCTCTGGGATGTCGCTCTCGGAGTGGGGTaGAGAGCCTCGGTGCTGAGTTTCAGGCTTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLLWDVALGVG*RASVLSFRLPL Trigger: CAAAGGAAGCCTGAAACTCAGCACCGAGGCTCTGCACCCCACTCCGAGAGCGACATCCCAGAGCAGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 ENSMUST00000233353.2 |
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| CDS CAA 90 bp | GTTCCAGGAGAGCCAGGGTTCCTTTGGGCTTTGTCCTTCTTGGCCTaGGTCCTTTTCTTTCGGGCCTGGAGCGCGAGCACTTTCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPGEPGFLWALSFLA*VLFFRAWSASTFRS Trigger: GGAGCGGAAAGTGCTCGCGCTCCAGGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACAAAGCCCAAAGGAACCCTGGCTCTCCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| CDS CCA 72 bp | CCTGGCCAATGGAATTTGACTCTTTGGCTTAGGCTGTaGAGCAGTGCTGACTGCAGACCCCGATGGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: PGQWNLTLWLRL*SSADCRPRWWG Trigger: CCCCCACCATCGGGGTCTGCAGTCAGCACTGCTCCACAGCCTAAGCCAAAGAGTCAAATTCCATTGGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| CDS CAA 72 bp | GAGCCAGGGTTCCTTTGGGCTTTGTCCTTCTTGGCCTaGGTCCTTTTCTTTCGGGCCTGGAGCGCGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: EPGFLWALSFLA*VLFFRAWSAST Trigger: AGTGCTCGCGCTCCAGGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACAAAGCCCAAAGGAACCCTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114767.3 |
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| CDS TCA 72 bp | CACATCACCCCGTGCCCGGCGCCCAGAGAGCAGAAGTaGACACAGGAGCACTGTGTCATACTTACTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: HITPCPAPREQK*TQEHCVILTGL Trigger: TAAGCCAGTAAGTATGACACAGTGCTCCTGTGTTCACTTCTGCTCTCTGGGCGCCGGGCACGGGGTGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233129.2 |
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| CDS CCA 72 bp | GGCGCACCACCCTCTCCACCACGCTCCGTGAGTGTCTaGTCCTGGCCAATGGAATTTGACTCTTCAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GAPPSPPRSVSV*SWPMEFDSSSF Trigger: GAAACTTGAAGAGTCAAATTCCATTGGCCAGGACCAGACACTCACGGAGCGTGGTGGAGAGGGTGGTGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS CAA 72 bp | GTTTCAGGCTTCCTTTGGGCTTTGTCCTTCTTGGCCTaGGTCCTTTTCTTTCGGGCCTGGAGCGCGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: VSGFLWALSFLA*VLFFRAWSAST Trigger: AGTGCTCGCGCTCCAGGCCCGAAAGAAAAGGACCAAGGCCAAGAAGGACAAAGCCCAAAGGAAGCCTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 |
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| CDS TCA 72 bp | ACGCTCCGTGAGTGTCTGGTCCTGGCCAATGGAATTTaGCTCTTTGGCTTAGGCTGTGGAGCAGTGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: TLRECLVLANGI*LFGLGCGAVLT Trigger: AGTCAGCACTGCTCCACAGCCTAAGCCAAAGAGTCAAATTCCATTGGCCAGGACCAGACACTCACGGAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004987.17 |
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| CDS CCA 72 bp | GCAGAAGTGAACACAGGAGCACTGTGTCATACTTACTaGCTTAGGCTGTGGAGCAGTGCTGACTGCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: AEVNTGALCHTY*LRLWSSADCRP Trigger: GGGTCTGCAGTCAGCACTGCTCCACAGCCTAAGCCAGTAAGTATGACACAGTGCTCCTGTGTTCACTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233129.2 |
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| CDS CCA 72 bp | ATTAACGACTCCAATCACTCCATTGCAATTAATCTCTaGCGCACCACCCTCTCCACCACGCTCCGTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: INDSNHSIAINL*RTTLSTTLREC Trigger: ACACTCACGGAGCGTGGTGGAGAGGGTGGTGCGCCAGAGATTAATTGCAATGGAGTGATTGGAGTCGTTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS TCA 72 bp | TTGAACAACCATTTCTCCATTTGGATCATTCGGGTCTaGGTTGCGAACCGATTTCAGCAGCCGGATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LNNHFSIWIIRV*VANRFQQPDFI Trigger: GATGAAATCCGGCTGCTGAAATCGGTTCGCAACTCAGACCCGAATGATCCAAATGGAGAAATGGTTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 |
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| CDS CCA 72 bp | TTTTCACAAGATGATAACCTCCTTTACAGTAGTCATTaGGGTCTTCCTGCTCGTCATCGTCAGACCCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FSQDDNLLYSSH*GLPARHRQTLE Trigger: TTCTAGGGTCTGACGATGACGAGCAGGAAGACCCCAATGACTACTGTAAAGGAGGTTATCATCTTGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 ENSMUST00000233353.2 |
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| CDS CCA 72 bp | TCAATTTCCTGCATTCGCTTCTCTAGTAATTCTGCCTaGCGCTTCTGCTTCTTCTTCAATTTCTTCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SISCIRFSSNSA*RFCFFFNFFFL Trigger: TAAGAAGAAGAAATTGAAGAAGAAGCAGAAGCGCCAGGCAGAATTACTAGAGAAGCGAATGCAGGAAATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130643.9 ENSMUST00000233353.2 ENSMUST00000233794.2 |
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| CDS TCA 72 bp | CCATTAACGCCTGATATTTTAAAGTCATCTAGTAGTTaGACAACCATTTCTCCATTTGGATCATTCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLTPDILKSSSS*TTISPFGSFGS Trigger: AGACCCGAATGATCCAAATGGAGAAATGGTTGTTCAACTACTAGATGACTTTAAAATATCAGGCGTTAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004987.17 ENSMUST00000130643.9 ENSMUST00000232751.2 ENSMUST00000233129.2 |
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