Pregenerated sensors for SRM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006442Ensembl transcript IDs: ENSMUST00000006611.9
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGTTGGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTaGTCCCCAGACAACTTGGAAGATCCTTGGTCCAATCCGATTGAG | + |
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Preference number: 1 (lower is better) Translates to: LVGGQESSGSLVQDW*SPDNLEDPWSNPIE Trigger: CTCAATCGGATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 90 bp | CACTTGGTTGGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTaGTGGTCCCCAGACAACTTGGAAGATCCTTGGTCCAATCCGATT | + |
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Preference number: 1 (lower is better) Translates to: HLVGGQESSGSLVQD*WSPDNLEDPWSNPI Trigger: AATCGGATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCAACCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 72 bp | GGCCAGGCCAGGCAGCATCGTGGGGCCTGTAACACTTaGTTGGTGGGCAAGAGTCATCTGGGAGTCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GQARQHRGACNT*LVGKSHLGVWS Trigger: GGACCAGACTCCCAGATGACTCTTGCCCACCAACCAAGTGTTACAGGCCCCACGATGCTGCCTGGCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 72 bp | GGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTaGTGGTCCCCAGACAACTTGGAAGATCCTTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GGQESSGSLVQD*WSPDNLEDPWS Trigger: GGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 72 bp | GGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTaGAAGATCCTTGGTCCAATCCGATTGAGGTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: GVWSRTGGPQTT*KILGPIRLRSR Trigger: CCGAGACCTCAATCGGATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 72 bp | GGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTaGTCCCCAGACAACTTGGAAGATCCTTGGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: GQESSGSLVQDW*SPDNLEDPWSN Trigger: ATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CCA 72 bp | AACACTTGGTTGGTGGGCAAGAGTCATCTGGGAGTCTaGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: NTWLVGKSHLGV*SRTGGPQTTWK Trigger: CTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCAACCAAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR TCA 90 bp | TGGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACGCGATCGCCGGTGGTaGAGCAGCTGCTCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: WWARVIWESGPGLVVPRQRDRRW*SSCSTC Trigger: GCAAGTGGAGCAGCTGCTTCACCACCGGCGATCGCG...TTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | CATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTTGCAGCGACAGGGCCTaGCCGGGCCACAGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLGVWSRTGGPQTTWKILCSDRA*PGHRLQ Trigger: CTGCAGCCTGTGGCCCGGCCAGGCCCTGTCGCTGCA...AAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR TCA 90 bp | GGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACAGGGCCCATGGGGTCTaGGGAGTCGGTGATGATGAC | + |
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Preference number: 4 (lower is better) Translates to: GGQESSGSLVQDWWSPDNRAHGV*GVGDDD Trigger: GTCATCATCACCGACTCCTCAGACCCCATGGGCCCT...GTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GTACAGAGCTGGTATAGGCGTGGGGCTGAACGCCACAGAGATAGACAGACAGAGGGCCGGGCCACAGGCTaGAGGTCTCTCGGAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQSWYRRGAERHRDRQTEGRATG*RSLGTS Trigger: GCTGGTTCCGAGAGACCTGCAGCCTGTGGCCCGGCC...CTCTGTCTGTCTATCTCTGTGGCGTTCAGCCCCACGCCTATACCAGCTCTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | ACACTTGGTTGGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCTTCCGCGGGTTGGGGTaGCTGCAGAGCGGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TLGWWARVIWESGPGLVVFRGLG*LQSGRL Trigger: CAACCTGCCGCTCTGCAGCCACCCCAACCCGCGGAA...GACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCAACCAAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | TCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTAGCAGCTGCTCCACTTaGAGCGACAGGGCCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SSGSLVQDWWSPDNLEDPSSCST*SDRAWP Trigger: CGGCCAGGCCCTGTCGCTGCAAGTGGAGCAGCTGCT...AGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | GGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTGCATCTGCTCCACCTaGGCCTGTGTCAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGQESSGSLVQDWWSPDNCICST*ACVNCC Trigger: GCAGCAGTTGACACAGGCCCAGGTGGAGCAGATGCA...GTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR TCA 90 bp | ACACTTGGTTGGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCGTGGAGAGTCAGCTTTaGGCTGGAGAAGCCAACGGC | + |
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Preference number: 4 (lower is better) Translates to: TLGWWARVIWESGPGLVVVESQL*AGEANG Trigger: GCCGTTGGCTTCTCCAGCTCAAAGCTGACTCTCCAC...GACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACCAACCAAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GGTGGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTATTTCAGCTGCATCTaGTCCACCTGGGCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GGQESSGSLVQDWWSPDNYFSCI*STWACV Trigger: GACACAGGCCCAGGTGGAGCAGATGCAGCTGAAATA...GTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | GGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGGTCCGAGTCAGCTTTGAGCTaGAGAAGCCAACGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: GSLVQDWWSPDNLEDPWSESALS*RSQRPC Trigger: GCATGGCCGTTGGCTTCTCCAGCTCAAAGCTGACTC...GGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | GGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGGTCCCTGGCTCCCGGAAGTTaGTGCTCGGGTTTTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GSLVQDWWSPDNLEDPWSLAPGS*CSGFCY Trigger: GTAGCAAAAACCCGAGCACCAACTTCCGGGAGCCAG...GGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | AAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGGACTCCACAGAGGGGTaGTTCACCACTTCCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: KSHLGVWSRTGGPQTTWKDSTEG*FTTSRR Trigger: CCTACGGGAAGTGGTGAAGCACCCCTCTGTGGAGTC...CTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | GTACAGAGCTGGTATAGGCGTGGGGCTGAACGCCACAGAGATAGACAGACAGAGAAGACGAGGATGTCTTaGTACCGCGATCGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VQSWYRRGAERHRDRQTEKTRMS*YRDRRW Trigger: CCACCGGCGATCGCGGTACCAAGACATCCTCGTCTT...CTCTGTCTGTCTATCTCTGTGGCGTTCAGCCCCACGCCTATACCAGCTCTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | CATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTCACTGGCACTCACCCTaGCAGCACAGGATGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: HLGVWSRTGGPQTTWKILHWHSP*QHRMPS Trigger: AGATGGCATCCTGTGCTGCCAGGGTGAGTGCCAGTG...AAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| 3UTR CAA 72 bp | GGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTaGGAAGATCCTTGGTCCAATCCGATTGAGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSLVQDWWSPDN*EDPWSNPIEVS Trigger: CGAGACCTCAATCGGATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR TCA 90 bp | ATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGTTTTGCTACACAGCATaGAGCCGATCTGGCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IWESGPGLVVPRQLGRSLFCYTA*SRSGRW Trigger: CCAGCGGCCAGATCGGCTTCATGCTGTGTAGCAAAA...CAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CCA 90 bp | GTACAGAGCTGGTATAGGCGTGGGGCTGAACGCCACAGAGATAGACAGACAGAGTGTCAACTGCTGCACTaGCTCCCGGAAGTTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VQSWYRRGAERHRDRQTECQLLH*LPEVGA Trigger: AGCACCAACTTCCGGGAGCCAGTGCAGCAGTTGACA...CTCTGTCTGTCTATCTCTGTGGCGTTCAGCCCCACGCCTATACCAGCTCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR TCA 90 bp | GGGCAAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGCTTGGTTCTGTTTCATaGACTCAAAGCCATCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GQESSGSLVQDWWSPDNLLGSVS*TQSHRP Trigger: TGGGCGATGGCTTTGAGTTCATGAAACAGAACCAAG...CAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCAGAACCAGCACGTTaGCGTAGGTTTTACTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: ESSGSLVQDWWSPDNLEDPEPAR*RRFYCG Trigger: TCCGCAGTAAAACCTACGGCAACGTGCTGGTTCTGG...ATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATGCTCCCGGAAGTTGGTaGTCGGGTTTTTGCTACACA | + |
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Preference number: 4 (lower is better) Translates to: ESSGSLVQDWWSPDNLEDAPGSW*SGFCYT Trigger: TGTGTAGCAAAAACCCGAGCACCAACTTCCGGGAGC...ATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GTACAGAGCTGGTATAGGCGTGGGGCTGAACGCCACAGAGATAGACAGACAGAGTGCCGTAGGTTTTACTaGGGAAGACGAGGATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VQSWYRRGAERHRDRQTECRRFY*GRRGCL Trigger: AAGACATCCTCGTCTTCCGCAGTAAAACCTACGGCA...CTCTGTCTGTCTATCTCTGTGGCGTTCAGCCCCACGCCTATACCAGCTCTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGAGCCATCTTCTTTGAGTaGTGTCTTCATGAGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RVIWESGPGLVVPRQLGRAIFFE*CLHELV Trigger: TACCAGCTCATGAAGACAGCACTCAAAGAAGATGGC...TCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR GCA 90 bp | GTACAGAGCTGGTATAGGCGTGGGGCTGAACGCCACAGAGATAGACAGACAGAGAGAGATTTGCAGAAGTaGCTCATCTCCTTGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: VQSWYRRGAERHRDRQTERDLQK*LISLMR Trigger: CCTCATCAAGGAGATGAGGCACTTCTGCAAATCTCT...CTCTGTCTGTCTATCTCTGTGGCGTTCAGCCCCACGCCTATACCAGCTCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CAA 90 bp | AAGAGTCATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGGAAGACGAGGATGTCTaGGTACCGCGATCGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSHLGVWSRTGGPQTTWKEDEDV*VPRSPV Trigger: CACCGGCGATCGCGGTACCAAGACATCCTCGTCTTC...CTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CAA 90 bp | CATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTCGTGGAGAGTCAGCTTaGAGCTGGAGAAGCCAACGG | + |
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Preference number: 5 (lower is better) Translates to: HLGVWSRTGGPQTTWKILRGESA*SWRSQR Trigger: CCGTTGGCTTCTCCAGCTCAAAGCTGACTCTCCACG...AAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGAAGTGCCTCATCTCCTaGATGAGGTCCAGGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IWESGPGLVVPRQLGRSLKCLIS*MRSRCS Trigger: GCTGCACCTGGACCTCATCAAGGAGATGAGGCACTT...CAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGGAGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGACTGGCTCCCGGAAGTaGGTGCTCGGGTTTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: IWESGPGLVVPRQLGRSLTGSRK*VLGFLL Trigger: TAGCAAAAACCCGAGCACCAACTTCCGGGAGCCAGT...CAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS-3UTR CAA 90 bp | AGTCTGGTCCAGGACTGGTGGTCCCCAGACAACTTGGAAGATCCTTGGTCCAATACGGGGAAGAGAGATTaGCAGAAGTGCCTCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLVQDWWSPDNLEDPWSNTGKRD*QKCLIS Trigger: GGAGATGAGGCACTTCTGCAAATCTCTCTTCCCCGT...ATTGGACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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| CDS GCA 72 bp | CCACTTGCAGCGACAGGGCCTGGCCGGGCCACAGGCTaGAGGTCTCTCGGAACCAGCCCTCACGGATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PLAATGPGRATG*RSLGTSPHGWR Trigger: CCGCCATCCGTGAGGGCTGGTTCCGAGAGACCTGCAGCCTGTGGCCCGGCCAGGCCCTGTCGCTGCAAGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006611.9 |
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