Pregenerated sensors for SRGN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020077Ensembl transcript IDs: ENSMUST00000020271.13, ENSMUST00000160987.8, ENSMUST00000162161.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGTAAAGCATTATGAGCCGTTGAGACCACAACTCCATGTTATTTaGGGCGTTAAGTTTCTAACTTTAAAACCCACAACAACCCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: KVKHYEPLRPQLHVI*GVKFLTLKPTTTPG Trigger: CCCCGGGGTTGTTGTGGGTTTTAAAGTTAGAAACTTAACGCCTCAAATAACATGGAGTTGTGGTCTCAACGGCTCATAATGCTTTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCAAGTATACTGAATACATaGTTCCACATGGAGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPSILNT*FHMEVG Trigger: CCCCACCTCCATGTGGAACAATGTATTCAGTATACT...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| 3UTR TCA 72 bp | ACCCTGAACAGGCATCTAGACAAAGGTAAAGCATTATaGGCCGTTGAGACCACAACTCCATGTTATTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: TLNRHLDKGKAL*AVETTTPCYLR Trigger: CCTCAAATAACATGGAGTTGTGGTCTCAACGGCTCATAATGCTTTACCTTTGTCTAGATGCCTGTTCAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCTTCCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACTTGCAGCGGACCCACTaGTACCTGGCTCTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HLVFPVTSNGHSSISTPHLQRTH*YLALRA Trigger: TGCTCGGAGAGCCAGGTACCAGTGGGTCCGCTGCAA...GTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGGAAGACCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR CCA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCATTGCAGCGGACCCACTaGTACCTGGCTCTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LSILNTLFHMEVGRQRPSLQRTH*YLALRA Trigger: TGCTCGGAGAGCCAGGTACCAGTGGGTCCGCTGCAA...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | AAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCACATTGCAGCGGACCCACTaGTACCTGGCTCTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KYTEYIVPHGGGETETVTLQRTH*YLALRA Trigger: TGCTCGGAGAGCCAGGTACCAGTGGGTCCGCTGCAA...TGTGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR TCA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCAAGGATAACCTTGCACTaGAGATCCCCAAACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPRITLH*RSPNQD Trigger: GTCCTGGTTTGGGGATCTTCAGTGCAAGGTTATCCT...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR GCA 90 bp | AAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCACAAAAAGCCATTCGGTTTaGAGCGGACCCACTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: KYTEYIVPHGGGETETVTKSHSV*SGPTGT Trigger: GGTACCAGTGGGTCCGCTGCAAACCGAATGGCTTTT...TGTGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR TCA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAAGGATAACCTTGCACTaGAGATCCCCAAACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSILNTLFHMEVGRQRPSRITLH*RSPNQD Trigger: GTCCTGGTTTGGGGATCTTCAGTGCAAGGTTATCCT...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR GCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCAAAAGCCATTCGGTTTaGAGCGGACCCACTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETKSHSV*SGPTGT Trigger: GGTACCAGTGGGTCCGCTGCAAACCGAATGGCTTTT...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR GCA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCAGGTTGGTCTTGGTTTTaGTCAGTGAGAATCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPGWSWF*SVRILS Trigger: TGACAGGATTCTCACTGAGCAAAACCAAGACCAACC...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR TCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCAGGATAACCTTGCACTaGAGATCCCCAAACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETRITLH*RSPNQD Trigger: GTCCTGGTTTGGGGATCTTCAGTGCAAGGTTATCCT...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCTTCCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACAAATCGTCTTCTGGTTaGTCTTGGTTTTGCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HLVFPVTSNGHSSISTPHKSSSG*SWFCSV Trigger: CACTGAGCAAAACCAAGACCAACCAGAAGACGATTT...GTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGGAAGACCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR GCA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAGGTTGGTCTTGGTTTTaGTCAGTGAGAATCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSILNTLFHMEVGRQRPSGWSWF*SVRILS Trigger: TGACAGGATTCTCACTGAGCAAAACCAAGACCAACC...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCTTCCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACGAGGGCCGATGTTATTaGATTCATCTATTAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: HLVFPVTSNGHSSISTPHEGRCY*IHLLGQ Trigger: TTGACCTAATAGATGAATCCAATAACATCGGCCCTC...GTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGGAAGACCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR TCA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCACATCATAATTGGAGATaGAATCTTTTGAGGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPHHNWR*NLLRVL Trigger: AAGGACCCTCAAAAGATTTCATCTCCAATTATGATG...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR GCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGGTTGGTCTTGGTTTTaGTCAGTGAGAATCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETGWSWF*SVRILS Trigger: TGACAGGATTCTCACTGAGCAAAACCAAGACCAACC...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCATCTTCTGGTTGGTCTTaGTTTTGCTCAGTGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: LSILNTLFHMEVGRQRPSSSGWS*FCSVRI Trigger: GATTCTCACTGAGCAAAACCAAGACCAACCAGAAGA...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAAAATCGTCTTCTGGTTaGTCTTGGTTTTGCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSILNTLFHMEVGRQRPSKSSSG*SWFCSV Trigger: CACTGAGCAAAACCAAGACCAACCAGAAGACGATTT...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCAAATAAAATCGTCTTCTaGTTGGTCTTGGTTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPNKIVF*LVLVLL Trigger: GAGCAAAACCAAGACCAACCAGAAGACGATTTTATT...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR CCA 90 bp | AAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCACAGAGGGCCGATGTTATTaGATTCATCTATTAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KYTEYIVPHGGGETETVTEGRCY*IHLLGQ Trigger: TTGACCTAATAGATGAATCCAATAACATCGGCCCTC...TGTGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCTCTTCTGGTTGGTCTTaGTTTTGCTCAGTGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETSSGWS*FCSVRI Trigger: GATTCTCACTGAGCAAAACCAAGACCAACCAGAAGA...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCAAATCGTCTTCTGGTTaGTCTTGGTTTTGCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETKSSSG*SWFCSV Trigger: CACTGAGCAAAACCAAGACCAACCAGAAGACGATTT...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| 3UTR CAA 72 bp | TCATTTAAACGTGGTACACTAAGTATACTGAATACATaGTTCCACATGGAGGTGGGGAGACAGAGACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SFKRGTLSILNT*FHMEVGRQRPS Trigger: TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTACCACGTTTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR TCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCCATCATAATTGGAGATaGAATCTTTTGAGGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETHHNWR*NLLRVL Trigger: AAGGACCCTCAAAAGATTTCATCTCCAATTATGATG...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CCA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCAATAAAATCGTCTTCTaGTTGGTCTTGGTTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: YTKYTEYIVPHGGGETETNKIVF*LVLVLL Trigger: GAGCAAAACCAAGACCAACCAGAAGACGATTTTATT...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTCACATCCAATGGCCACAGCTCAATATCTACCCCTCACCATGTAAACCAGTCTTCTGGTTGGTCTaGGTTTTGCTCAGTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PCHIQWPQLNIYPSPCKPVFWLV*VLLSEN Trigger: ATTCTCACTGAGCAAAACCAAGACCAACCAGAAGAC...TGGTTTACATGGTGAGGGGTAGATATTGAGCTGTGGCCATTGGATGTGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160987.8 |
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| CDS-3UTR CAA 90 bp | AAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCACAGGAGGGCCGATGTTATaGGATTCATCTATTAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KYTEYIVPHGGGETETVTGGPML*DSSIRS Trigger: TGACCTAATAGATGAATCCAATAACATCGGCCCTCC...TGTGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAGGAGGGCCGATGTTATaGGATTCATCTATTAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LSILNTLFHMEVGRQRPSGGPML*DSSIRS Trigger: TGACCTAATAGATGAATCCAATAACATCGGCCCTCC...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAGTCTTCTGGTTGGTCTaGGTTTTGCTCAGTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LSILNTLFHMEVGRQRPSVFWLV*VLLSEN Trigger: ATTCTCACTGAGCAAAACCAAGACCAACCAGAAGAC...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | TACACTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGGAGGGCCGATGTTATaGGATTCATCTATTAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: YTKYTEYIVPHGGGETETGGPML*DSSIRS Trigger: TGACCTAATAGATGAATCCAATAACATCGGCCCTCC...GGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCAAAAATCGTCTTCTGGTaGGTCTTGGTTTTGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LSILNTLFHMEVGRQRPSKIVFW*VLVLLS Trigger: ACTGAGCAAAACCAAGACCAACCAGAAGACGATTTT...TGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS-3UTR CAA 90 bp | AAGTATACTGAATACATTGTTCCACATGGAGGTGGGGAGACAGAGACCGTCACAAAAATCGTCTTCTGGTaGGTCTTGGTTTTGCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: KYTEYIVPHGGGETETVTKIVFW*VLVLLS Trigger: ACTGAGCAAAACCAAGACCAACCAGAAGACGATTTT...TGTGACGGTCTCTGTCTCCCCACCTCCATGTGGAACAATGTATTCAGTATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS TCA 72 bp | CTGGTACCTGGCTCTCCGAGCAGGATAACCTTGCACTaGAGATCCCCAAACCAGGACGAAGGCGAGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVPGSPSRITLH*RSPNQDEGESQ Trigger: CTGGCTCTCGCCTTCGTCCTGGTTTGGGGATCTTCAGTGCAAGGTTATCCTGCTCGGAGAGCCAGGTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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| CDS CCA 72 bp | AAAAGCCATTCGGTTTGCAGCGGACCCACTGGTACCTaGCTCTCCGAGCAGGATAACCTTGCACTGAAGATC | + |
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Preference number: 6 (lower is better) Translates to: KSHSVCSGPTGT*LSEQDNLALKI Trigger: GATCTTCAGTGCAAGGTTATCCTGCTCGGAGAGCCAGGTACCAGTGGGTCCGCTGCAAACCGAATGGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020271.13 ENSMUST00000160987.8 ENSMUST00000162161.2 |
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