Pregenerated sensors for SRFBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024528Ensembl transcript IDs: ENSMUST00000025406.9, ENSMUST00000237229.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAGGCATGTGCCACAGTGTATGTGCAATCAGAGAACGACTTTGTaGATTAGTTCTGCCCTCATACCAAGGGAATCACAGGGGTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: HRHVPQCMCNQRTTL*ISSALIPRESQGSN Trigger: GTTTGACCCCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACTGTGGCACATGCCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCAGAAGCGGGTGACCTGCTAATCTGGCAACCGCTCTGTCGGTCGCGGATGAAAACAGACAGCTaGGAAGCTGACAGCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: SSSEAGDLLIWQPLCRSRMKTDS*EADSRH Trigger: GTGTCTGCTGTCAGCTTCCCAGCTGTCTGTTTTCAT...CCGCGACCGACAGAGCGGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGATGTACATAGGCATGTaGCACAGTGTATGTGCAATC | + |
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Preference number: 2 (lower is better) Translates to: FCTMNTISWTWSMDRKTRMYIGM*HSVCAI Trigger: GATTGCACATACACTGTGGCACATGCCTATGTACAT...CCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGTACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGTATGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAACTCCTAAGCCCTGTTTaGCTTATTTTGAAGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SVCAIRERLCELVLPSYQLLSPV*LILKAK Trigger: TTTTGCCTTCAAAATAAGGCAAACAGGGCTTAGGAG...TTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAACACAAGTTAAAATGCCTGCATCTTGGTACTGTGAGAGTAAAAACCCAGTGCCACAGTGTATGTaGAATCAGAGAACGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: ISTQVKMPASWYCESKNPVPQCM*NQRTTL Trigger: CAAAGTCGTTCTCTGATTGCACATACACTGTGGCAC...TGGGTTTTTACTCTCACAGTACCAAGATGCAGGCATTTTAACTTGTGTTGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR TCA 90 bp | GAACTCCTATTTAGCCACTTCAATCCCTCCTCTTCTACATTTCAACACAAGTTACTGTTTGCCTTATTTTaGAGGCAAAAGGGAAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ELLFSHFNPSSSTFQHKLLFALF*RQKGKL Trigger: AAGCTTTCCCTTTTGCCTTCAAAATAAGGCAAACAG...TAACTTGTGTTGAAATGTAGAAGAGGAGGGATTGAAGTGGCTAAATAGGAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAACACAAGTTAAAATGCCTGCATCTTGGTACTGTGAGAGTAAAAACCCACCATTCTTCAATGAATaGAAATACTCATTGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ISTQVKMPASWYCESKNPPFFNE*KYSLQG Trigger: CCCCTGCAATGAGTATTTCCATTCATTGAAGAATGG...TGGGTTTTTACTCTCACAGTACCAAGATGCAGGCATTTTAACTTGTGTTGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTAAAGTTGCTCAAACACTaGAAAGATAAGTCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: VTALYETGKHLLQTSFPLKLLKH*KDKSQV Trigger: TACTTGTGACTTATCTTTGCAGTGTTTGAGCAACTT...TAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGCAGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR CCA 72 bp | AAACAGACAGCTGGGAAGCTGACAGCAGACACGCCATaGGCCGTACTGAGCGGCTGGAGAGTTTTGCAACTA | + |
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Preference number: 3 (lower is better) Translates to: KQTAGKLTADTP*AVLSGWRVLQL Trigger: TAGTTGCAAAACTCTCCAGCCGCTCAGTACGGCCCATGGCGTGTCTGCTGTCAGCTTCCCAGCTGTCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| 3UTR TCA 72 bp | CCTTTTAGCACATCAATTTTCTTCTTCAGAAGCGGGTaGCCTGCTAATCTGGCAACCGCTCTGTCGGTCGCG | + |
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Preference number: 3 (lower is better) Translates to: PFSTSIFFFRSG*PANLATALSVA Trigger: CGCGACCGACAGAGCGGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAAGAAAATTGATGTGCTAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTAAAAACCCAGCCCTGTTaGAGCCACACAGCAAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: VTALYETGKHLLQTSFPLKTQPC*SHTARS Trigger: GGACCTTGCTGTGTGGCTCAAACAGGGCTGGGTTTT...TAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGCAGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR TCA 72 bp | GTGCCACAGTGTATGTGCAATCAGAGAACGACTTTGTaGATTAGTTCTGCCCTCATACCAAGGGAATCACAG | + |
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Preference number: 3 (lower is better) Translates to: VPQCMCNQRTTL*ISSALIPRESQ Trigger: CTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACTGTGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR CAA 90 bp | AGTGTATGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAATCTCCTAAGCCCTGTTaGCCTTATTTTGAAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SVCAIRERLCELVLPSYQSPKPC*PYFEGK Trigger: TTTGCCTTCAAAATAAGGCAAACAGGGCTTAGGAGA...TTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATCACTATATCCTGGACTaGGTCCATGGACAGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: ALYETGKHLLQTSFPLLYHYILD*VHGQKN Trigger: GTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTG...ATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR GCA 72 bp | AATCCCTCCTCTTCTACATTTCAACACAAGTTAAAATaGCTGCATCTTGGTACTGTGAGAGTAAAAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: NPSSSTFQHKLK*LHLGTVRVKTQ Trigger: CTGGGTTTTTACTCTCACAGTACCAAGATGCAGGCATTTTAACTTGTGTTGAAATGTAGAAGAGGAGGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTACACATAAGCAAGTaGCTCAAACACTGCAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: VTALYETGKHLLQTSFPLLHISK*LKHCKD Trigger: ATCTTTGCAGTGTTTGAGCAACTTGCTTATGTGTAG...TAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGCAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | TACCAAGGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCCCTGAAGGCCTCCCCTaGGACCCTGGAGTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: YQGNHRGQTQAIGPQEVSPEGLP*DPGVVP Trigger: AGGGACCACTCCAGGGTCTCAGGGGAGGCCTTCAGG...GCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCCTTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | AAACAGACAGCTGGGAAGCTGACAGCAGACACGCCATGGGCCGTACTGAGCGGCCTTCTGTGCCCTTTTTaGACTTCAGTCTGCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: KQTAGKLTADTPWAVLSGLLCPF*TSVCRH Trigger: GTGTCGGCAGACTGAAGTCCAAAAAGGGCACAGAAG...GCCGCTCAGTACGGCCCATGGCGTGTCTGCTGTCAGCTTCCCAGCTGTCTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR TCA 90 bp | GGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCCATCTCACGTGCATCATCCTTTaGCCTTGCAATGTCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: GNHRGQTQAIGPQEVSHLTCIIL*PCNVLT Trigger: TGTAAGGACATTGCAAGGTCAAAGGATGATGCACGT...GAGATGGCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | GGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCCATCTCGCATCTTTGAAGGCCTaGACAGCATCTTTTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: GNHRGQTQAIGPQEVSHLASLKA*TASFST Trigger: TGTGCTAAAAGATGCTGTCCAGGCCTTCAAAGATGC...GAGATGGCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | GGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCCATCTCGGCCAGTTTTTCTTTTaGACCACTTGCTGCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: GNHRGQTQAIGPQEVSHLGQFFF*TTCCIL Trigger: AAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCC...GAGATGGCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | ACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTACCCAGCACCCTTTCCTaGAGGCCTCCCCTGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: TMNTISWTWSMDRKTRALPSTLS*RPPLRP Trigger: GGGTCTCAGGGGAGGCCTTCAGGAAAGGGTGCTGGG...TAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | GTGAGCCATCTCCTAAGCCCTGTTTGCCTTATTTTGAAGGCAAAAGGGAAAGCTCCTGAGACCCTGGAGTaGTCCCTGCTCTGGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VSHLLSPVCLILKAKGKAPETLE*SLLWVP Trigger: AGGCACCCAGAGCAGGGACCACTCCAGGGTCTCAGG...AGCTTTCCCTTTTGCCTTCAAAATAAGGCAAACAGGGCTTAGGAGATGGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | ATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATCACAGGCCCTGGAGTGGTCCCTaGTCTGGGTGCCTGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IRERLCELVLPSYQGNHRPWSGP*SGCLLC Trigger: ACAGAGCAGGCACCCAGAGCAGGGACCACTCCAGGG...CCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | TACCAAGGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCAAACTGCTTCTTGACTaGGGGTTCATTTTCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: YQGNHRGQTQAIGPQEVSKLLLD*GFIFWK Trigger: TTTCCAGAAAATGAACCCCCAGTCAAGAAGCAGTTT...GCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCCTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTTCAGAAGCGGGTGACCTGCTAATCTGGCAACCGCTCTGTCGGTCGCGGTTGGTTTTTCAACAGTaGATCTTCTGTGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSSEAGDLLIWQPLCRSRLVFQQ*IFCALF Trigger: AAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAA...CCGCGACCGACAGAGCGGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR GCA 90 bp | TTGTCTTCCACAGCAATAAAAGGCAAACAGGCAAGGATCTTTTACAAACCTCTCGGTCCCTGCTCTGGGTaGCTGCTCTGTCTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSTAIKGKQARIFYKPLGPCSG*LLCLGQ Trigger: CTGGCCAAGACAGAGCAGGCACCCAGAGCAGGGACC...GAGAGGTTTGTAAAAGATCCTTGCCTGTTTGCCTTTTATTGCTGTGGAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | CAAAGACATCACTCCATGCCAGGAAAAGTAGCCGAGAAGGCTGACTCATTATCCTTACAACCTCGTTATTaGGGTTCAGAGTCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QRHHSMPGKVAEKADSLSLQPRY*GSESPA Trigger: AGCCGGGGACTCTGAACCTCAATAACGAGGTTGTAA...GGATAATGAGTCAGCCTTCTCGGCTACTTTTCCTGGCATGGAGTGATGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR GCA 90 bp | TTCTGTACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCGATTTTGGACTGCTaGTCCTTCCGCCTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FCTMNTISWTWSMDRKTRAILDC*SFRLLL Trigger: GAGCAGGAGGCGGAAGGAGCAGCAGTCCAAAATCGC...CCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGTACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTATGTACATAGGCATGTGCCACAGTGTATGTGCAATCAGAGAACGACTTGAGTGGTCCCTGCTCTaGGTGCCTGCTCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ICMYIGMCHSVCAIRERLEWSLL*VPALSW Trigger: CCAAGACAGAGCAGGCACCCAGAGCAGGGACCACTC...AAGTCGTTCTCTGATTGCACATACACTGTGGCACATGCCTATGTACATACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | GCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATCCTCCCCTGAGACCCTaGAGTGGTCCCTGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALYETGKHLLQTSFPLLYPPLRP*SGPCSG Trigger: CCCAGAGCAGGGACCACTCCAGGGTCTCAGGGGAGG...ATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | ACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTATTGGGGCCTGTTCTCTaGGATCCCTTCTGGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TMNTISWTWSMDRKTRALLGPVL*DPFWSF Trigger: AAAGCTCCAGAAGGGATCCCAGAGAACAGGCCCCAA...TAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | ATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATCACAGGTTACAACCTCGTTATTaGGGTTCAGAGTCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: IRERLCELVLPSYQGNHRLQPRY*GSESPA Trigger: AGCCGGGGACTCTGAACCTCAATAACGAGGTTGTAA...CCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | CTATATTACAGGACTCAGCCATCCATGTGCCAAAGACATCACTCCATGCCAGGAACAGTGCATCTTCTGTaGCCTTTTTGGACTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LYYRTQPSMCQRHHSMPGTVHLL*PFWTSV Trigger: GACTGAAGTCCAAAAAGGGCACAGAAGATGCACTGT...TCCTGGCATGGAGTGATGTCTTTGGCACATGGATGGCTGAGTCCTGTAATATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR GCA 90 bp | AGTGTATGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAACCTGCTCTGGGTGCCTaGTCTGTCTTGGCCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SVCAIRERLCELVLPSYQPALGA*SVLASF Trigger: AAAACTGGCCAAGACAGAGCAGGCACCCAGAGCAGG...TTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | CTATATTACAGGACTCAGCCATCCATGTGCCAAAGACATCACTCCATGCCAGGACTTTGGGCTCGCCTTTaGTTTTTCAACAGTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LYYRTQPSMCQRHHSMPGLWARL*FFNSAS Trigger: AGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAG...TCCTGGCATGGAGTGATGTCTTTGGCACATGGATGGCTGAGTCCTGTAATATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR CCA 90 bp | ACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTATGGGGCTTTATTCTTTaGGGCCTGTTCTCTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: TMNTISWTWSMDRKTRALWGFIL*GLFSGI Trigger: GATCCCAGAGAACAGGCCCCAAAGAATAAAGCCCCA...TAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | TGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATTCTGCCTTGCATCTTTaGAGGCCTGGACAGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: CAIRERLCELVLPSYQGNSALHL*RPGQHL Trigger: AAGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGA...ATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | ATTTCAACACAAGTTAAAATGCCTGCATCTTGGTACTGTGAGAGTAAAAACCCAGGACGGATGCAGAGGTaGCTGCATCGTCTGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISTQVKMPASWYCESKNPGRMQR*LHRLLH Trigger: GTGAAGCAGACGATGCAGGCACCTCTGCATCCGTCC...TGGGTTTTTACTCTCACAGTACCAAGATGCAGGCATTTTAACTTGTGTTGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGCTTCTGTGCCCTTTTTaGACTTCAGTCTGCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: FCTMNTISWTWSMDRKTRLLCPF*TSVCRH Trigger: GTGTCGGCAGACTGAAGTCCAAAAAGGGCACAGAAG...CCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGTACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | ACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATGGAGTACATGGTCGTGTTGGTGTCCTTTaGCTTCTGCTCCCTGACAAC | + |
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Preference number: 4 (lower is better) Translates to: TGKHLLQTSFPLLYGVHGRVGVL*LLLPDN Trigger: GTTGTCAGGGAGCAGAAGGCAAAGGACACCAACACG...ACCATGTACTCCATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTATGTACATAGGCATGTGCCACAGTGTATGTGCAATCAGAGAACGACTTTCTTTGCTGCCGTGTTaGTGTCCTTTGCCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ICMYIGMCHSVCAIRERLSLLPC*CPLPSA Trigger: AGCAGAAGGCAAAGGACACCAACACGGCAGCAAAGA...AAGTCGTTCTCTGATTGCACATACACTGTGGCACATGCCTATGTACATACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | TGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATGTCGCTGTCCTCAGATaGAGAAGACTGTTTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: CAIRERLCELVLPSYQGNVAVLR*RRLFVE Trigger: TTCTACAAACAGTCTTCTGCATCTGAGGACAGCGAC...ATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | TTGTCTTCCACAGCAATAAAAGGCAAACAGGCAAGGATCTTTTACAAACCTCTCTCCTTGGCCGAGGAATaGACACCAGATTCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSTAIKGKQARIFYKPLSLAEE*TPDSFF Trigger: AAAGAAGGAATCTGGTGTCCATTCCTCGGCCAAGGA...GAGAGGTTTGTAAAAGATCCTTGCCTGTTTGCCTTTTATTGCTGTGGAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | ATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATCACAGGTGTACTTGTTTTAGATaGTACCTTTGGGAGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: IRERLCELVLPSYQGNHRCTCFR*YLWEGL Trigger: AAGCCCCTCCCAAAGGTACCATCTAAAACAAGTACA...CCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR TCA 90 bp | GATCTTTTACAAACCTCTCTCTTTTCCTTTAAGGTCACTGTACTGTATGAAACATTCTTCAGAAGCGGGTaGCCTGCTAATCTGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: DLLQTSLFSFKVTVLYETFFRSG*PANLAT Trigger: GGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAA...TGTTTCATACAGTACAGTGACCTTAAAGGAAAAGAGAGAGGTTTGTAAAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | TTGTCTTCCACAGCAATAAAAGGCAAACAGGCAAGGATCTTTTACAAACCTCTCACAGTGCATCTTCTGTaGCCTTTTTGGACTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSTAIKGKQARIFYKPLTVHLL*PFWTSV Trigger: GACTGAAGTCCAAAAAGGGCACAGAAGATGCACTGT...GAGAGGTTTGTAAAAGATCCTTGCCTGTTTGCCTTTTATTGCTGTGGAAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | GCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATGTGTCCTTTGCCTTCTaGTCCCTGACAACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALYETGKHLLQTSFPLLYVSFAF*SLTTVL Trigger: GAGAACTGTTGTCAGGGAGCAGAAGGCAAAGGACAC...ATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | TTGTCTTCCACAGCAATAAAAGGCAAACAGGCAAGGATCTTTTACAAACCTCTCCTTTGGGCTCGCCTTTaGTTTTTCAACAGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSTAIKGKQARIFYKPLLWARL*FFNSAS Trigger: AGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAG...GAGAGGTTTGTAAAAGATCCTTGCCTGTTTGCCTTTTATTGCTGTGGAAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | ACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATGGAGTACATGGTTCCTCAAGCAACCTTTaGGCTCGCCTTTGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGKHLLQTSFPLLYGVHGSSSNL*ARLWFF Trigger: GAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGA...ACCATGTACTCCATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTATGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAAATTCCTTCATGGCATaGATCTCCTCAAGCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVCAIRERLCELVLPSYQNSFMA*ISSSNL Trigger: AAGGTTGCTTGAGGAGATCCATGCCATGAAGGAATT...TTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACATACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CCA 90 bp | TTGTCTTCCACAGCAATAAAAGGCAAACAGGCAAGGATCTTTTACAAACCTCTCGTTTCAATTCCTTCATaGCATGGATCTCCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSTAIKGKQARIFYKPLVSIPS*HGSPQA Trigger: TGCTTGAGGAGATCCATGCCATGAAGGAATTGAAAC...GAGAGGTTTGTAAAAGATCCTTGCCTGTTTGCCTTTTATTGCTGTGGAAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR GCA 90 bp | TGTGCAATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATTTGGTTTTTCAACAGTaGATCTTCTGTGCCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CAIRERLCELVLPSYQGNLVFQQ*IFCALF Trigger: AAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAA...ATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGATTGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| 3UTR CAA 72 bp | TGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTATaGATCCATTCTTCAATGAATGGAAATACTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: WTWSMDRKTRAL*IHSSMNGNTHC Trigger: GCAATGAGTATTTCCATTCATTGAAGAATGGATCAATAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS-3UTR GCA 90 bp | GTCACTGCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTCAAAGCCTCTGTATaGACTCTTTGTAAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTALYETGKHLLQTSFPLLKASV*TLCKLL Trigger: AAGCAGTTTACAAAGAGTGCATACAGAGGCTTTGAG...TAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGCAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTTTACAAACCTCTCTCTTTTCCTTTAAGGTCACTGTACTGTATGAAACAAGAACCGTTCTTCAGTaGTGTCATCAAAATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLQTSLFSFKVTVLYETRTVLQ*CHQNTP Trigger: AGGAGTATTTTGATGACAGCACTGAAGAACGGTTCT...TGTTTCATACAGTACAGTGACCTTAAAGGAAAAGAGAGAGGTTTGTAAAAGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS GCA 90 bp | CTGCTCCTTCCGCCTCCTGCTCGCTTCCCAGGACGGATGCAGAGGTaGCTGCATCGTCTGCTTCACACTCTCAAAGCCTCTGTATGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPPPARFPGRMQR*LHRLLHTLKASVCT Trigger: AGTGCATACAGAGGCTTTGAGAGTGTGAAGCAGACGATGCAGGCACCTCTGCATCCGTCCTGGGAAGCGAGCAGGAGGCGGAAGGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS CCA 90 bp | CCTGAGACCCTGGAGTGGTCCCTGCTCTGGGTGCCTGCTCTGTCTTaGCCAGTTTTTCTTTTGAACCACTTGCTGCATTCTTTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PETLEWSLLWVPALS*PVFLLNHLLHSLLP Trigger: CGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCCAAGACAGAGCAGGCACCCAGAGCAGGGACCACTCCAGGGTCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS-3UTR CAA 90 bp | TACCAAGGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCTTTACAACCTCGTTATaGAGGTTCAGAGTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YQGNHRGQTQAIGPQEVSFTTSL*RFRVPG Trigger: GCCGGGGACTCTGAACCTCAATAACGAGGTTGTAAA...GCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCCTTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS TCA 90 bp | GGTCCCTGCTCTGGGTGCCTGCTCTGTCTTGGCCAGTTTTTCTTTTaGACCACTTGCTGCATTCTTTGCTGCCGTGTTGGTGTCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPCSGCLLCLGQFFF*TTCCILCCRVGVLC Trigger: GCAAAGGACACCAACACGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCCAAGACAGAGCAGGCACCCAGAGCAGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS-3UTR CAA 90 bp | TACCAAGGGAATCACAGGGGTCAAACTCAGGCCATCGGGCCCCAGGAAGTGAGCTTTCTTTTGAACCACTaGCTGCATTCTTTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YQGNHRGQTQAIGPQEVSFLLNH*LHSLLP Trigger: CGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAA...GCTCACTTCCTGGGGCCCGATGGCCTGAGTTTGACCCCTGTGATTCCCTTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CCA 90 bp | TGTTCTCTGGGATCCCTTCTGGAGCTTTTAGGTCCAGCCAACGAGTaGAAAAACACGGATTCGAACTTCCTGGCTTCTGGAATTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLGSLLELLGPANE*KNTDSNFLASGIGL Trigger: CAGGCCAATTCCAGAAGCCAGGAAGTTCGAATCCGTGTTTTTCCACTCGTTGGCTGGACCTAAAAGCTCCAGAAGGGATCCCAGAGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | AGGACTCAGCCATCCATGTGCCAAAGACATCACTCCATGCCAGGAAAAGTAGCCTCTTCTGTGCCCTTTTaGGACTTCAGTCTGCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RTQPSMCQRHHSMPGKVASSVPF*DFSLPT Trigger: TGTCGGCAGACTGAAGTCCAAAAAGGGCACAGAAGA...GGCTACTTTTCCTGGCATGGAGTGATGTCTTTGGCACATGGATGGCTGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS TCA 90 bp | TGGACAGCATCTTTTAGCACATCAATTTTCTTCTTCAGAAGCGGGTaGCCTGCTAATCTGGCAACCGCTCTGTCGGTCGCGGTAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: WTASFSTSIFFFRSG*PANLATALSVAVES Trigger: GGATTCTACCGCGACCGACAGAGCGGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAAGAAAATTGATGTGCTAAAAGATGCTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS GCA 90 bp | CAGAGGTGCCTGCATCGTCTGCTTCACACTCTCAAAGCCTCTGTATaGACTCTTTGTAAACTGCTTCTTGACTGGGGGTTCATTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QRCLHRLLHTLKASV*TLCKLLLDWGFIFW Trigger: CCAGAAAATGAACCCCCAGTCAAGAAGCAGTTTACAAAGAGTGCATACAGAGGCTTTGAGAGTGTGAAGCAGACGATGCAGGCACCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | CAAAGACATCACTCCATGCCAGGAAAAGTAGCCGAGAAGGCTGACTCATTATCCCTCCTCAAGCAACCTTaGGGCTCGCCTTTGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRHHSMPGKVAEKADSLSLLKQP*GSPLVF Trigger: AAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAG...GGATAATGAGTCAGCCTTCTCGGCTACTTTTCCTGGCATGGAGTGATGTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS CCA 90 bp | TCCTTCATGGCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTTaGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTTGGACTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFMAWISSSNLWARL*FFNSASSVPFLDFS Trigger: ACTGAAGTCCAAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGCCATGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CCA 90 bp | ACCTTCATGGCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTTaGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTTGGACTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFMAWISSSNLWARL*FFNSASSVPFLDFS Trigger: ACTGAAGTCCAAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGCCATGAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATCACAGGCTCTGCCTTGCATCTTaGAAGGCCTGGACAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IRERLCELVLPSYQGNHRLCLAS*KAWTAS Trigger: AGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGAG...CCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS TCA 90 bp | TACTCTCAGATGATTCGGCCGCTGGAGCACTCTGCCTTGCATCTTTaGAGGCCTGGACAGCATCTTTTAGCACATCAATTTTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YSQMIRPLEHSALHL*RPGQHLLAHQFSSS Trigger: TGAAGAAGAAAATTGATGTGCTAAAAGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGAGTGCTCCAGCGGCCGAATCATCTGAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | ATCAGAGAACGACTTTGTGAATTAGTTCTGCCCTCATACCAAGGGAATCACAGGTCTTCTGTGCCCTTTTaGGACTTCAGTCTGCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: IRERLCELVLPSYQGNHRSSVPF*DFSLPT Trigger: TGTCGGCAGACTGAAGTCCAAAAAGGGCACAGAAGA...CCTGTGATTCCCTTGGTATGAGGGCAGAACTAATTCACAAAGTCGTTCTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | ACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTACTCCTCAAGCAACCTTaGGGCTCGCCTTTGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TMNTISWTWSMDRKTRALLLKQP*GSPLVF Trigger: AAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAG...TAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS GCA 90 bp | GACTTTTCCAATGAAGAAGTCGTCACCACTGTCGCTGTCCTCAGATaGAGAAGACTGTTTGTAGAACCGTTCTTCAGTGCTGTCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DFSNEEVVTTVAVLR*RRLFVEPFFSAVIK Trigger: TTTGATGACAGCACTGAAGAACGGTTCTACAAACAGTCTTCTGCATCTGAGGACAGCGACAGTGGTGACGACTTCTTCATTGGAAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | ATCCTAAGACACCTCCTGAGTTATAGTAGGATCATGAAAACAGACAGCTGGGAATTTACAACCTCGTTATaGAGGTTCAGAGTCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILRHLLSYSRIMKTDSWEFTTSL*RFRVPG Trigger: GCCGGGGACTCTGAACCTCAATAACGAGGTTGTAAA...TTCCCAGCTGTCTGTTTTCATGATCCTACTATAACTCAGGAGGTGTCTTAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS-3UTR CAA 90 bp | ACCATGAACACTATATCCTGGACTTGGTCCATGGACAGAAAAACTAGGGCTCTATCCTGGCTTCTGGAATaGGCCTGTGTTTATCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TMNTISWTWSMDRKTRALSWLLE*ACVYRF Trigger: GAAACGATAAACACAGGCCAATTCCAGAAGCCAGGA...TAGAGCCCTAGTTTTTCTGTCCATGGACCAAGTCCAGGATATAGTGTTCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | GTGAGCCATCTCCTAAGCCCTGTTTGCCTTATTTTGAAGGCAAAAGGGAAAGCTTTTGTAAACTGCTTCTaGACTGGGGGTTCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSHLLSPVCLILKAKGKAFVNCF*TGGSFS Trigger: AGAAAATGAACCCCCAGTCAAGAAGCAGTTTACAAA...AGCTTTCCCTTTTGCCTTCAAAATAAGGCAAACAGGGCTTAGGAGATGGCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | GATCTTTTACAAACCTCTCTCTTTTCCTTTAAGGTCACTGTACTGTATGAAACACCTTTGGGCTCGCCTTaGGTTTTTCAACAGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: DLLQTSLFSFKVTVLYETPLGSP*VFQQCI Trigger: GATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGG...TGTTTCATACAGTACAGTGACCTTAAAGGAAAAGAGAGAGGTTTGTAAAAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS-3UTR CAA 90 bp | GCACTGTATGAAACAGGCAAGCATCTTTTACAAACCTCTTTTCCTTTACTGTATGGTGCCTGCTCTGTCTaGGCCAGTTTTTCTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALYETGKHLLQTSFPLLYGACSV*ASFSFE Trigger: TTCAAAAGAAAAACTGGCCAAGACAGAGCAGGCACC...ATACAGTAAAGGAAAAGAGGTTTGTAAAAGATGCTTGCCTGTTTCATACAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS TCA 72 bp | GAGTTAACCCCAGCACCCTTTCCTGAAGGCCTCCCCTaGGACCCTGGAGTGGTCCCTGCTCTGGGTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELTPAPFPEGLP*DPGVVPALGAC Trigger: GCAGGCACCCAGAGCAGGGACCACTCCAGGGTCTCAGGGGAGGCCTTCAGGAAAGGGTGCTGGGGTTAACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS GCA 72 bp | CCGCCTCCTGCTCGCTTCCCAGGACGGATGCAGAGGTaGCTGCATCGTCTGCTTCACACTCTCAAAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPARFPGRMQR*LHRLLHTLKAS Trigger: AGAGGCTTTGAGAGTGTGAAGCAGACGATGCAGGCACCTCTGCATCCGTCCTGGGAAGCGAGCAGGAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS TCA 72 bp | TTTACAACCTCGTTATTGAGGTTCAGAGTCCCCGGCTaGACCATTGCGGACGGAGGAAGAGGGTCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FTTSLLRFRVPG*TIADGGRGSAA Trigger: GGCGGCTGACCCTCTTCCTCCGTCCGCAATGGTTCAGCCGGGGACTCTGAACCTCAATAACGAGGTTGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025406.9 ENSMUST00000237229.2 |
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| CDS GCA 72 bp | CTCCTGCTCGCTTCCCAGGACGGATGCAGAGGTGCCTaGATCGTCTGCTTCACACTCTCAAAGCCTCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLASQDGCRGA*IVCFTLSKPLY Trigger: ATACAGAGGCTTTGAGAGTGTGAAGCAGACGATGCAGGCACCTCTGCATCCGTCCTGGGAAGCGAGCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS GCA 72 bp | GCTTCCCAGGACGGATGCAGAGGTGCCTGCATCGTCTaGTTCACACTCTCAAAGCCTCTGTATGCACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASQDGCRGACIV*FTLSKPLYALF Trigger: AAAGAGTGCATACAGAGGCTTTGAGAGTGTGAAGCAGACGATGCAGGCACCTCTGCATCCGTCCTGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS CCA 72 bp | ACCTTTGGGAGGGGCTTCAGTTCCTTGGCCGAGGAATaGACACCAGATTCCTTCTTTCGAGTCCGTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: TFGRGFSSLAEE*TPDSFFRVRLT Trigger: AGTCAGACGGACTCGAAAGAAGGAATCTGGTGTCCATTCCTCGGCCAAGGAACTGAAGCCCCTCCCAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS GCA 72 bp | GCATTCTTTGCTGCCGTGTTGGTGTCCTTTGCCTTCTaGTCCCTGACAACAGTTCTCTCAGGATGCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFFAAVLVSFAF*SLTTVLSGCCD Trigger: GTCACAGCATCCTGAGAGAACTGTTGTCAGGGAGCAGAAGGCAAAGGACACCAACACGGCAGCAAAGAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 90 bp | TGGTCCCTGCTCTGGGTGCCTGCTCTGTCTTGGCCAGTTTTTCTTTaGAACCACTTGCTGCATTCTTTGCTGCCGTGTTGGTGTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSLLWVPALSWPVFL*NHLLHSLLPCWCPL Trigger: CAAAGGACACCAACACGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCCAAGACAGAGCAGGCACCCAGAGCAGGGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS GCA 72 bp | ACTTGCTGCATTCTTTGCTGCCGTGTTGGTGTCCTTTaGCTTCTGCTCCCTGACAACAGTTCTCTCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TCCILCCRVGVL*LLLPDNSSLRM Trigger: CATCCTGAGAGAACTGTTGTCAGGGAGCAGAAGGCAAAGGACACCAACACGGCAGCAAAGAATGCAGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS CCA 72 bp | GGATCCCTTCTGGAGCTTTTAGGTCCAGCCAACGAGTaGAAAAACACGGATTCGAACTTCCTGGCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLLELLGPANE*KNTDSNFLASG Trigger: TCCAGAAGCCAGGAAGTTCGAATCCGTGTTTTTCCACTCGTTGGCTGGACCTAAAAGCTCCAGAAGGGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS CAA 72 bp | TTCTCTCAGGATGCTGTGACTCACGTGCATCATCCTTaGACCTTGCAATGTCCTTACACCGGCCTTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSQDAVTHVHHP*TLQCPYTGLLL Trigger: CAGGAGAAGGCCGGTGTAAGGACATTGCAAGGTCAAAGGATGATGCACGTGAGTCACAGCATCCTGAGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS CAA 90 bp | AGTGTACTTGTTTTAGATGGTACCTTTGGGAGGGGCTTCAGTTCCTaGGCCGAGGAATGGACACCAGATTCCTTCTTTCGAGTCCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVLVLDGTFGRGFSS*AEEWTPDSFFRVRL Trigger: CAGACGGACTCGAAAGAAGGAATCTGGTGTCCATTCCTCGGCCAAGGAACTGAAGCCCCTCCCAAAGGTACCATCTAAAACAAGTACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS TCA 72 bp | TCTTTTAGCACATCAATTTTCTTCTTCAGAAGCGGGTaGCCTGCTAATCTGGCAACCGCTCTGTCGGTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SFSTSIFFFRSG*PANLATALSVA Trigger: CGCGACCGACAGAGCGGTTGCCAGATTAGCAGGTCACCCGCTTCTGAAGAAGAAAATTGATGTGCTAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS TCA 72 bp | TCTGGGTGCCTGCTCTGTCTTGGCCAGTTTTTCTTTTaGACCACTTGCTGCATTCTTTGCTGCCGTGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGCLLCLGQFFF*TTCCILCCRVG Trigger: ACCAACACGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCCAAGACAGAGCAGGCACCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
||
| CDS GCA 72 bp | TTTGCCTTCTGCTCCCTGACAACAGTTCTCTCAGGATaGTGTGACTCACGTGCATCATCCTTTGACCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FAFCSLTTVLSG*CDSRASSFDLA Trigger: TGCAAGGTCAAAGGATGATGCACGTGAGTCACAGCATCCTGAGAGAACTGTTGTCAGGGAGCAGAAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 72 bp | GATGATTCGGCCGCTGGAGCACTCTGCCTTGCATCTTaGAAGGCCTGGACAGCATCTTTTAGCACATCAATT | + |
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Preference number: 6 (lower is better) Translates to: DDSAAGALCLAS*KAWTASFSTSI Trigger: AATTGATGTGCTAAAAGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGAGTGCTCCAGCGGCCGAATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 72 bp | TGGCCAGTTTTTCTTTTGAACCACTTGCTGCATTCTTaGCTGCCGTGTTGGTGTCCTTTGCCTTCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WPVFLLNHLLHS*LPCWCPLPSAP Trigger: GGGAGCAGAAGGCAAAGGACACCAACACGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGAAAAACTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 72 bp | GTTTTAGATGGTACCTTTGGGAGGGGCTTCAGTTCCTaGGCCGAGGAATGGACACCAGATTCCTTCTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: VLDGTFGRGFSS*AEEWTPDSFFR Trigger: TCGAAAGAAGGAATCTGGTGTCCATTCCTCGGCCAAGGAACTGAAGCCCCTCCCAAAGGTACCATCTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 90 bp | GACCTTCATGGCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTaGGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTTGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DLHGMDLLKQPLGSP*VFQQCIFCALFGLQ Trigger: CTGAAGTCCAAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGCCATGAAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237229.2 |
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| CDS TCA 72 bp | ATGATTCGGCCGCTGGAGCACTCTGCCTTGCATCTTTaGAGGCCTGGACAGCATCTTTTAGCACATCAATTT | + |
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Preference number: 6 (lower is better) Translates to: MIRPLEHSALHL*RPGQHLLAHQF Trigger: AAATTGATGTGCTAAAAGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGAGTGCTCCAGCGGCCGAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS GCA 72 bp | CTGCATCGTCTGCTTCACACTCTCAAAGCCTCTGTATaGACTCTTTGTAAACTGCTTCTTGACTGGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LHRLLHTLKASV*TLCKLLLDWGF Trigger: GAACCCCCAGTCAAGAAGCAGTTTACAAAGAGTGCATACAGAGGCTTTGAGAGTGTGAAGCAGACGATGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CCA 72 bp | GCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTTaGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: AWISSSNLWARL*FFNSASSVPFL Trigger: CAAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025406.9 ENSMUST00000237229.2 |
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| CDS CAA 72 bp | GGCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTaGGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GMDLLKQPLGSP*VFQQCIFCALF Trigger: AAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025406.9 ENSMUST00000237229.2 |
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| CDS CAA 72 bp | TCTTTTGAACCACTTGCTGCATTCTTTGCTGCCGTGTaGGTGTCCTTTGCCTTCTGCTCCCTGACAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: SFEPLAAFFAAV*VSFAFCSLTTV Trigger: AACTGTTGTCAGGGAGCAGAAGGCAAAGGACACCAACACGGCAGCAAAGAATGCAGCAAGTGGTTCAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 90 bp | TTCCTTCATGGCATGGATCTCCTCAAGCAACCTTTGGGCTCGCCTTaGGTTTTTCAACAGTGCATCTTCTGTGCCCTTTTTGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLHGMDLLKQPLGSP*VFQQCIFCALFGLQ Trigger: CTGAAGTCCAAAAAGGGCACAGAAGATGCACTGTTGAAAAACCAAAGGCGAGCCCAAAGGTTGCTTGAGGAGATCCATGCCATGAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CAA 90 bp | GTACTCTCAGATGATTCGGCCGCTGGAGCACTCTGCCTTGCATCTTaGAAGGCCTGGACAGCATCTTTTAGCACATCAATTTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSDDSAAGALCLAS*KAWTASFSTSIFFF Trigger: GAAGAAGAAAATTGATGTGCTAAAAGATGCTGTCCAGGCCTTCAAAGATGCAAGGCAGAGTGCTCCAGCGGCCGAATCATCTGAGAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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| CDS CCA 72 bp | CAGCCAACGAGTGGAAAAACACGGATTCGAACTTCCTaGCTTCTGGAATTGGCCTGTGTTTATCGTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QPTSGKTRIRTS*LLELACVYRFL Trigger: TAAGAAACGATAAACACAGGCCAATTCCAGAAGCCAGGAAGTTCGAATCCGTGTTTTTCCACTCGTTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025406.9 |
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