Pregenerated sensors for SRF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015605Ensembl transcript IDs: ENSMUST00000015749.7, ENSMUST00000233104.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTaGCCAGTCCCACAGAAGGCCTGTGAGTGGGAAGGTGGCACAGTC | + |
|
Preference number: 1 (lower is better) Translates to: RLERGPQMFPRTGTL*PVPQKACEWEGGTV Trigger: GACTGTGCCACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR CCA 90 bp | CCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGTaGGAAGGTGGCACAGTCCCATCGGGTCAGCTAATACTCATAGCA | + |
|
Preference number: 1 (lower is better) Translates to: PRTGTLCPVPQKACE*EGGTVPSGQLILIA Trigger: TGCTATGAGTATTAGCTGACCCGATGGGACTGTGCCACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR TCA 90 bp | GTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTaGGTGGGAAGGTGGCACAGTCCCATCGGGTCAGCTAATACTCAT | + |
|
Preference number: 1 (lower is better) Translates to: VSSDGNTVPSPTEGL*VGRWHSPIGSANTH Trigger: ATGAGTATTAGCTGACCCGATGGGACTGTGCCACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR CCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTaGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: QTMADTKLTRGRQRG*REGPKCFLGREHCA Trigger: GGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR GCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGCGGCCCCAGTAACCTaGCCGGTGCACAGGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DQGEEETANSGSLQPRSPAAPVT*PVHRPS Trigger: GCTGGGCCTGTGCACCGGGCAGGTTACTGGGGCCGC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR CCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCCATATCTCTCCCAGCTaGCTCCCTGAGGGGCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DQGEEETANSGSLQPRSPHISPS*LPEGQG Trigger: CCCCTGCCCCTCAGGGAGCCAGCTGGGAGAGATATG...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR TCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGCACCATCAACAGCATaGCAGGCAGAGCAGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DQGEEETANSGSLQPRSPAPSTA*QAEQEG Trigger: TCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCACAATAAATAAGTGGTaGCGTCCCTTGGGCCGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGRGHRLRAQAPISLPAGTINKW*RPLGRL Trigger: CAGACGGCCCAAGGGACGGCACCACTTATTTATTGT...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCGCAACAATAAATAAGTaGTGCCGTCCCTTGGGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: GWREGPKCFLGREHCAQSATINK*CRPLGR Trigger: ACGGCCCAAGGGACGGCACCACTTATTTATTGTTGC...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGATACTCATAGCAAATTaGGCCAGGCTGGCAGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QTMADTKLTRGRQRGWREILIAN*ARLAGG Trigger: ACCCCCTGCCAGCCTGGCTCAATTTGCTATGAGTAT...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR GCA 72 bp | ACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCTaGAGGTCCGCGGGAACAGAGGCAAGGCAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TANSGSLQPRSP*RSAGTEARQGR Trigger: CCTGCCCTGCCTTGCCTCTGTTCCCGCGGACCTGCAGGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR TCA 72 bp | TGGGGAGGGCAGGCAGGCCCGTTTCTTTGGCTGGAGTaGGAGGGCATAGTCCTGTGGCTGCCCGCTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: WGGQAGPFLWLE*EGIVLWLPAPS Trigger: AGAAGGAGCGGGCAGCCACAGGACTATGCCCTCTCACTCCAGCCAAAGAAACGGGCCTGCCTGCCCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR TCA 72 bp | GACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTaGGTGGGAAGGTGGCACAGTCCCATCGGGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGNTVPSPTEGL*VGRWHSPIGSA Trigger: AGCTGACCCGATGGGACTGTGCCACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR GCA 72 bp | AGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTaGCCAGTCCCACAGAAGGCCTGTGAGTGGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGPQMFPRTGTL*PVPQKACEWEG Trigger: ACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR CCA 72 bp | GGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGTaGGAAGGTGGCACAGTCCCATCGGGTCAGCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: GTLCPVPQKACE*EGGTVPSGQLI Trigger: TATTAGCTGACCCGATGGGACTGTGCCACCTTCCCACTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR CCA 72 bp | GCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTaGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ADTKLTRGRQRG*REGPKCFLGRE Trigger: TTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGAATACTCATAGCAAATaGAGCCAGGCTGGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QTMADTKLTRGRQRGWRENTHSK*SQAGRG Trigger: CCCCCTGCCAGCCTGGCTCAATTTGCTATGAGTATT...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCGTCTGTGGTGGGGTCTaGGCGGGGCGGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRGHRLRAQAPISLPAGVCGGV*AGRRVW Trigger: CCAGACTCTCCGCCCCGCTCAGACCCCACCACAGAC...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGGAGGGGGTCCGGTTCAGGTTaGCCCCCAGGGCCGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RREESCTINSMTGRAGRRGSGSG*PPGPSP Trigger: GGGGCTCGGCCCTGGGGGGCAACCTGAACCGGACCC...CCTCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCTGCACAGGGACCTGCTaGGCCACTGCCCCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSCTGTC*ATAPPG Trigger: GCCTGGTGGGGCAGTGGCCCAGCAGGTCCCTGTGCA...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGCGGAGTCGCCCTCGCTaGCGCTGTAGAGGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEEGGELHHQQHDRQSRKRSRPR*RCRGPR Trigger: CCGGGGCCCTCTACAGCGGCAGCGAGGGCGACTCCG...CTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCCATAGGCCTTCTTCATaGTGCCCGTCTTCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRGHRLRAQAPISLPAGHRPSS*CPSSSC Trigger: GCAAGAGGAAGACGGGCATCATGAAGAAGGCCTATG...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCGTACAGACGACGTCATaGTGGTGGCGGGCAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSVQTTS*WWRATS Trigger: TGACGTTGCCCGCCACCATCATGACGTCGTCTGTAC...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCTGCTGCTCCCAGCTTaGTGCCCTATCACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSLLLPA*CPITAI Trigger: GATGGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAG...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGTGCTGTCTGGATTGTaGAGGTGGTACCCGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPVLSGL*RWYPAG Trigger: ACCTGCCGGGTACCACCTCCACAATCCAGACAGCAC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCCCGACACCTGGTAGGTaGGATCTGGCTCTTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPPTPGR*DLALQS Trigger: GCTTTGAAGAGCCAGATCTCACCTACCAGGTGTCGG...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGGTGCCAGGTAGTTGGTaGTGGGGAAGGAGGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTVPGSW*WGRRGR Trigger: GCGGCCCCTCCTTCCCCATCACCAACTACCTGGCAC...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGCGCTGCCTGTACTCTTaGGCACAGTCCCGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFLGREHCAQSHRRPVRCLYS*AQSRWH Trigger: GTGCCAACGGGACTGTGCTCAAGAGTACAGGCAGCG...CACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGGCCTGCACAGGGACCTaGTGGGCCACTGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVACTGT*WATAPP Trigger: TGGTGGGGCAGTGGCCCAGCAGGTCCCTGTGCAGGC...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGCACGGTCCCAGACGGTaGTGTCAGGAACACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKCFLGREHCAQSHRRPVHGPRR*CQEHLR Trigger: CCTCAGGTGTTCCTGACAGCACCGTCTGGGACCGTG...CACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCGTGTCCCTGTCAGCGTaGACAGCTCATAGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSVSLSA*TAHRPS Trigger: AGAAGGCCTATGAGCTGTCCACGCTGACAGGGACAC...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGTTCTCTGGTCTGTGGTaGGGTCTGAGCGGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMFPRTGTLCPVPQKACEFSGLW*GLSGAE Trigger: CTCCGCCCCGCTCAGACCCCACCACAGACCAGAGAA...CTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGGAGGTCATTCTCTGGTCTGTaGTGGGGTCTGAGCGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RREESCTINSMTGRAGRRSFSGL*WGLSGA Trigger: CGCCCCGCTCAGACCCCACCACAGACCAGAGAATGA...CCTCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGCCTGGCTCCTGGACCTaGCTGTGGGACACCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QMFPRTGTLCPVPQKACEPGSWT*LWDTCM Trigger: CATGCAGGTGTCCCACAGCCAGGTCCAGGAGCCAGG...CTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCTCTTGGTGCTGTGGGTaGCATCCAGGTTCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSSWCCG*HPGSPP Trigger: AGGTGGTGAACCTGGATGCCACCCACAGCACCAAGA...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCTCACTCTTGGTGCTGTaGGTGGCATCCAGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSSLLVL*VASRFT Trigger: GGTGAACCTGGATGCCACCCACAGCACCAAGAGTGA...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGGCTGTCAGGAACACCTaGGGGACACCACCTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTAVRNT*GTPPVP Trigger: CGGGACAGGTGGTGTCCCTCAGGTGTTCCTGACAGC...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233104.2 |
||
| CDS-3UTR GCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCCCTTGGTTTCCCCACTaGTGTCAGATTCCGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPPWFPH*CQIPTP Trigger: AGGTGTCGGAATCTGACAGCAGTGGGGAAACCAAGG...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCTGCATGGTGGATGGTaGCTGAGAGAAGGCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSLHGGW*LREGIE Trigger: CTCAATGCCTTCTCTCAGGCACCATCCACCATGCAG...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGCAAAGGTATACACATaGCCTGTCTCACTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPAKVYT*PVSLAT Trigger: GGTGGCCAGTGAGACAGGCCATGTGTATACCTTTGC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGTCCCATCGGGTCAGCTAATACTCATAGCAAATTGAGCCAGGCTGGCGCGGGGCGGAGAGTCTaGCGAGTTGAGGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHSPIGSANTHSKLSQAGAGRRV*RVEAGL Trigger: CAGACCTGCCTCAACTCGCCAGACTCTCCGCCCCGC...GCCAGCCTGGCTCAATTTGCTATGAGTATTAGCTGACCCGATGGGACTGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCCTGGTAGGTGAGATCTaGCTCTTCAAAGCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPLVGEI*LFKASG Trigger: GCCACTGGCTTTGAAGAGCCAGATCTCACCTACCAG...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCTAGGGTACATCATGTaGCCACCCACAGTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWREGPKCFLGREHCAQSLGYIM*PPTVVG Trigger: ACCCACAACTGTGGGTGGCCACATGATGTACCCTAG...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGCTGAGGGACACCACCTaGCTCCTGGACCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWRELRDTT*LLDLAV Trigger: CACAGCCAGGTCCAGGAGCCAGGTGGTGTCCCTCAG...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGCCGTCTTCCTCTTGCTaGAGGTCGTGTAGCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTPSSSC*RSCSAA Trigger: TGCGGCGCTACACGACCTTCAGCAAGAGGAAGACGG...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGTGCCGGTCTCACTGGTaGTCATGGGCTGCAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEEGGELHHQQHDRQSRKCRSHW*SWAAVC Trigger: GCAAACTGCAGCCCATGATCACCAGTGAGACCGGCA...CTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGTGGAGGAGGTCTGCGTaGGGTCTGTGCTGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREWRRSA*GLCCCH Trigger: GTGACAGCAGCACAGACCTCACGCAGACCTCCTCCA...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGTGGAGGAGGTCTGCGTaGGGTCTGTGCTGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTWRRSA*GLCCCH Trigger: GTGACAGCAGCACAGACCTCACGCAGACCTCCTCCA...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGGCCATCAGCCAGGCCTaGGGTGGGGGCATACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVAISQA*GGGIHH Trigger: GTGATGTATGCCCCCACCTCAGGCCTGGCTGATGGC...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | TGGCACAGTCCCATCGGGTCAGCTAATACTCATAGCAAATTGAGCCAGGCTGGCGCTGTCAGGAACACCTaGGGGACACCACCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WHSPIGSANTHSKLSQAGAVRNT*GTPPGS Trigger: GGAGCCAGGTGGTGTCCCTCAGGTGTTCCTGACAGC...GCCAGCCTGGCTCAATTTGCTATGAGTATTAGCTGACCCGATGGGACTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCTCATGGGCTGCAGTTTaGGGGTGGCAAAGGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPSWAAV*GWQRYT Trigger: TGTATACCTTTGCCACCCGCAAACTGCAGCCCATGA...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGGGCCGCTGCTGACTTaGATGGTGGTAGAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREGPLLT*MVVEVL Trigger: CAGCACCTCTACCACCATGCAAGTCAGCAGCGGCCC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGCACGGTCCCAGACGGTaGTGTCAGGAACACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTHGPRR*CQEHLR Trigger: CCTCAGGTGTTCCTGACAGCACCGTCTGGGACCGTG...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR GCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGCAGAGACAGGGATCTaGACGGTCCCAGACGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREAETGI*TVPDGA Trigger: AGCACCGTCTGGGACCGTGCAGATCCCTGTCTCTGC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGGCAGAGACAGGGATCTaGACGGTCCCAGACGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTAETGI*TVPDGA Trigger: AGCACCGTCTGGGACCGTGCAGATCCCTGTCTCTGC...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGCATGGCCTGTCTCACTaGCCACCAGCAACAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SEEGGELHHQQHDRQSRKHGLSH*PPATAP Trigger: AGGTGCTGTTGCTGGTGGCCAGTGAGACAGGCCATG...CTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGGTGGCACTCATTCTCTaGTCTGTGGTGGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKCFLGREHCAQSHRRPVVALIL*SVVGSE Trigger: CTCAGACCCCACCACAGACCAGAGAATGAGTGCCAC...CACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGCTCTTCAAAGCCAGTaGCACTCATTCTCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQGEEETANSGSLQPRSPALQSQ*HSFSGL Trigger: CAGACCAGAGAATGAGTGCCACTGGCTTTGAAGAGC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGGGGAGACGCTTGCTGTaGGGCCTGGTGCACATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMFPRTGTLCPVPQKACEGRRLL*GLVHMN Trigger: ATTCATGTGCACCAGGCCCCACAGCAAGCGTCTCCC...CTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR TCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGAGAGTCTGGCGAGTTaGGGCAGGTCTGAATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREESLAS*GRSESA Trigger: CGCTGATTCAGACCTGCCTCAACTCGCCAGACTCTC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGAAGCTGGTAGGCAGCTaGATAAGGCCCCCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREKLVGS*IRPPEE Trigger: CTCCTCTGGGGGCCTTATGCAGCTGCCTACCAGCTT...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGCTGCTCCCAGCTTGCTaGCCTATCACAGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTLLPAC*PITAIW Trigger: CCAGATGGCTGTGATAGGGCAGCAAGCTGGGAGCAG...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGGCTGCAGTTTGCGGGTaGCAAAGGTATACACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKCFLGREHCAQSHRRPVAAVCG*QRYTHG Trigger: GCCATGTGTATACCTTTGCCACCCGCAAACTGCAGC...CACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGCTGGTGATCATGGGCTaGAGTTTGCGGGTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTLVIMG*SLRVAK Trigger: CTTTGCCACCCGCAAACTGCAGCCCATGATCACCAG...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGCTGCTGCTCCCAGCTTaGTGCCCTATCACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVLLLPA*CPITAI Trigger: GATGGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAG...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGGAGGGGTGACTGTGAATGCTaGCTTCAGTGTGTCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RREESCTINSMTGRAGRRGDCEC*LQCVLG Trigger: ACCAAGGACACACTGAAGCCAGCATTCACAGTCACC...CCTCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGGGGAGACGCTTGCTGTaGGGCCTGGTGCACATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVGRRLL*GLVHMN Trigger: ATTCATGTGCACCAGGCCCCACAGCAAGCGTCTCCC...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGCAGCCAGGCCTGAGGTaGGGGCATACATCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVQPGLR*GHTSLH Trigger: ATGCAGTGATGTATGCCCCCACCTCAGGCCTGGCTG...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGTGTGGGACACCTGCATaGTGGATGGTGCCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWRECGTPA*WMVPER Trigger: TCTCTCAGGCACCATCCACCATGCAGGTGTCCCACA...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGTCTTGGTGCTGTGGGTaGCATCCAGGTTCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTSWCCG*HPGSPP Trigger: AGGTGGTGAACCTGGATGCCACCCACAGCACCAAGA...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGTCACTCTTGGTGCTGTaGGTGGCATCCAGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTSLLVL*VASRFT Trigger: GGTGAACCTGGATGCCACCCACAGCACCAAGAGTGA...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGACTAGCAGACACTGGTaGCAGGTAGTTGGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTTSRHW*QVVGDG Trigger: CCCATCACCAACTACCTGGCACCAGTGTCTGCTAGT...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGGGGGCATACATCACTaGATGGGGACTAGGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: QTMADTKLTRGRQRGWREGGIHH*MGTRVH Trigger: ATGTACCCTAGTCCCCATGCAGTGATGTATGCCCCC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGGCTTCAGTGTGTCCTTaGTTTCCCCACTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KATINKWCRPLGRLSRVTASVCP*FPHCCQ Trigger: CTGACAGCAGTGGGGAAACCAAGGACACACTGAAGC...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CCA 90 bp | CAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCCACAGAAGGCCTGTGAGGACACTAGCAGACACTaGTGCCAGGTAGTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QMFPRTGTLCPVPQKACEDTSRH*CQVVGD Trigger: ATCACCAACTACCTGGCACCAGTGTCTGCTAGTGTC...CTCACAGGCCTTCTGTGGGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGCTGGTGAAGCTGAACTaGAGAGACAGGGATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKATINKWCRPLGRLSRVLVKLN*RDRDLH Trigger: GTGCAGATCCCTGTCTCTGCAGTTCAGCTTCACCAG...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGTCCCATCGGGTCAGCTAATACTCATAGCAAATTGAGCCAGGCTGGCGCATACATCACTGCATaGGGACTAGGGTACATCATG | + |
|
Preference number: 4 (lower is better) Translates to: WHSPIGSANTHSKLSQAGAYITA*GLGYIM Trigger: CATGATGTACCCTAGTCCCCATGCAGTGATGTATGC...GCCAGCCTGGCTCAATTTGCTATGAGTATTAGCTGACCCGATGGGACTGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 90 bp | CGGCGCCCAGCTCCTCCTCCTCGCCGGACTCGGAGTCGCCCTCGCTaGCGCTGTAGAGGGCCCCGGCGGTGGGCGCCGCTGCCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRPAPPPRRTRSRPR*RCRGPRRWAPLPLQ Trigger: CTGCAGCGGCAGCGGCGCCCACCGCCGGGGCCCTCTACAGCGGCAGCGAGGGCGACTCCGAGTCCGGCGAGGAGGAGGAGCTGGGCGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCGTCTTCTTCCCCGGCTaGGCCCCGCTCACCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DQGEEETANSGSLQPRSPVFFPG*APLTAP Trigger: CGGCGCGGTGAGCGGGGCCAAGCCGGGGAAGAAGAC...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | CTGCTGTCACGAGAGGGAGACGCTTGCTGTGGGGCCTGGTGCACATaGATGGCCTGCACAGGGACCTGCTGGGCCACTGCCCCACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSREGDACCGAWCT*MACTGTCWATAPPG Trigger: GCCTGGTGGGGCAGTGGCCCAGCAGGTCCCTGTGCAGGCCATTCATGTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGTGACAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | GGAACACCTGAGGGACACCACCTGTCCCGCTGGAGGAGGTCTGCGTaGGGTCTGTGCTGCTGTCACGAGAGGGAGACGCTTGCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTPEGHHLSRWRRSA*GLCCCHERETLAVG Trigger: CCCCACAGCAAGCGTCTCCCTCTCGTGACAGCAGCACAGACCTCACGCAGACCTCCTCCAGCGGGACAGGTGGTGTCCCTCAGGTGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233104.2 |
||
| CDS GCA 90 bp | TGGGCCACTGCCCCACCAGGCATGAGGGTGAAGCTGGTAGGCAGCTaGATAAGGCCCCCAGAGGAGACAGGGCCGCTGCCTGTACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WATAPPGMRVKLVGS*IRPPEETGPLPVLL Trigger: CAAGAGTACAGGCAGCGGCCCTGTCTCCTCTGGGGGCCTTATGCAGCTGCCTACCAGCTTCACCCTCATGCCTGGTGGGGCAGTGGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 90 bp | CTGCGTGAGGTCTGTGCTGCTGTCACGAGAGGGAGACGCTTGCTGTaGGGCCTGGTGCACATGAATGGCCTGCACAGGGACCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LREVCAAVTRGRRLL*GLVHMNGLHRDLLG Trigger: GCCCAGCAGGTCCCTGTGCAGGCCATTCATGTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGTGACAGCAGCACAGACCTCACGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGTCGCTCAGGCTCCGCTaGAGGCCGCGCCGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KATINKWCRPLGRLSRVTSLRLR*RPRRSA Trigger: CGCCGAGCGGCGCGGCCTCAAGCGGAGCCTGAGCGA...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCTTGAGCACAGTCCCGTaGGCACTGCTGACAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRGHRLRAQAPISLPAGLSTVP*ALLTAL Trigger: CAGCGCTGTCAGCAGTGCCAACGGGACTGTGCTCAA...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAGAGAGGGCCCCAAATGTTTCCTCGGACGGGAACACTGTGCCCAGTCCACGAGAGGGAGACGCTaGCTGTGGGGCCTGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GWREGPKCFLGREHCAQSTRGRR*LWGLVH Trigger: GTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGT...GGACTGGGCACAGTGTTCCCGTCCGAGGAAACATTTGGGGCCCTCTCTCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | GTGGGGTCTGAGCGGGGCGGAGAGTCTGGCGAGTTGAGGCAGGTCTaGATCAGCGCCTTGCCGGTCTCACTGGTGATCATGGGCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VGSERGGESGELRQV*ISALPVSLVIMGCS Trigger: ACTGCAGCCCATGATCACCAGTGAGACCGGCAAGGCGCTGATTCAGACCTGCCTCAACTCGCCAGACTCTCCGCCCCGCTCAGACCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCTCGATGAACTCCATCTaGATCTTCACGCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRGHRLRAQAPISLPAGSMNSI*IFTRPR Trigger: CCGGGGCCGCGTGAAGATCAAGATGGAGTTCATCGA...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGAGGGCATCGGCTGAGGGCACAAGCCCCCATATCTCTCCCAGCTGGCTGTGGCCACCCACAGTaGTGGGTACAGACGACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGRGHRLRAQAPISLPAGCGHPQ*WVQTTS Trigger: TGACGTCGTCTGTACCCACAACTGTGGGTGGCCACA...GCCAGCTGGGAGAGATATGGGGGCTTGTGCCCTCAGCCGATGCCCTCTGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | GGTACATCATGTGGCCACCCACAGTTGTGGGTACAGACGACGTCATaGTGGTGGCGGGCAACGTCACTGTCCCGCTGGAGGAGGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSCGHPQLWVQTTS*WWRATSLSRWRRSA Trigger: CGCAGACCTCCTCCAGCGGGACAGTGACGTTGCCCGCCACCATCATGACGTCGTCTGTACCCACAACTGTGGGTGGCCACATGATGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 90 bp | GTGAAGCTGAACTGCAGAGACAGGGATCTGCACGGTCCCAGACGGTaGTGTCAGGAACACCTGAGGGACACCACCTGTCCCGCTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKLNCRDRDLHGPRR*CQEHLRDTTCPAGG Trigger: TCCTCCAGCGGGACAGGTGGTGTCCCTCAGGTGTTCCTGACAGCACCGTCTGGGACCGTGCAGATCCCTGTCTCTGCAGTTCAGCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233104.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGACGACGAGAGGGAGACGCTaGCTGTGGGGCCTGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KATINKWCRPLGRLSRVTTRGRR*LWGLVH Trigger: GTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGT...CGTCACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGGAGGGCTGCTGCTCCCAGCTaGCTGCCCTATCACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RREESCTINSMTGRAGRRAAAPS*LPYHSH Trigger: ATGGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAGC...CCTCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGAGGAGAGCTGCACCATCAACAGCATGACAGGCAGAGCAGGAAGGAGGTGTAGCTCGGTGAGGTaGCTGCTGCTCCCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RREESCTINSMTGRAGRRCSSVR*LLLPAC Trigger: GCAAGCTGGGAGCAGCAGCAACCTCACCGAGCTACA...CCTCCTTCCTGCTCTGCCTGTCATGCTGTTGATGGTGCAGCTCTCCTCCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | CTCTTCAAAGCCAGTGGCACTCATTCTCTGGTCTGTGGTGGGGTCTaGGCGGGGCGGAGAGTCTGGCGAGTTGAGGCAGGTCTGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKASGTHSLVCGGV*AGRRVWRVEAGLNQ Trigger: CTGATTCAGACCTGCCTCAACTCGCCAGACTCTCCGCCCCGCTCAGACCCCACCACAGACCAGAGAATGAGTGCCACTGGCTTTGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | TCTTGGTGCTGTGGGTGGCATCCAGGTTCACCACCTGTAGCTCGGTaGGGTTGCTGCTGCTCCCAGCTTGCTGCCCTATCACAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWCCGWHPGSPPVAR*GCCCSQLAALSQPS Trigger: AGATGGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAGCAACCTCACCGAGCTACAGGTGGTGAACCTGGATGCCACCCACAGCACCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS CCA 90 bp | GCTGCAGTTTGCGGGTGGCAAAGGTATACACATGGCCTGTCTCACTaGCCACCAGCAACAGCACCTGTGTCCCTGTCAGCGTGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVCGWQRYTHGLSH*PPATAPVSLSAWTA Trigger: AGCTGTCCACGCTGACAGGGACACAGGTGCTGTTGCTGGTGGCCAGTGAGACAGGCCATGTGTATACCTTTGCCACCCGCAAACTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | GACCAAGGGGAGGAAGAGACCGCTAACAGTGGTTCCCTCCAACCCAGGAGCCCCATCATGGGCTGCAGTTaGCGGGTGGCAAAGGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: DQGEEETANSGSLQPRSPIMGCS*RVAKVY Trigger: GTATACCTTTGCCACCCGCAAACTGCAGCCCATGAT...GGGGCTCCTGGGTTGGAGGGAACCACTGTTAGCGGTCTCTTCCTCCCCTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGGGGCCGCTGCTGACTaGCATGGTGGTAGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTMADTKLTRGRQRGWREGAAAD*HGGRGA Trigger: AGCACCTCTACCACCATGCAAGTCAGCAGCGGCCCC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 90 bp | GAGGTGGGGGCATACATCACTGCATGGGGACTAGGGTACATCATGTaGCCACCCACAGTTGTGGGTACAGACGACGTCATGATGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVGAYITAWGLGYIM*PPTVVGTDDVMMVA Trigger: CGCCACCATCATGACGTCGTCTGTACCCACAACTGTGGGTGGCCACATGATGTACCCTAGTCCCCATGCAGTGATGTATGCCCCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | CAGACCATGGCAGACACAAAGCTAACCAGAGGTCGCCAAAGAGGCTGGAGAGAGGTGGTACCCGGCAGGTaGGTGACTGTGAATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTMADTKLTRGRQRGWREVVPGR*VTVNAG Trigger: GCCAGCATTCACAGTCACCAACCTGCCGGGTACCAC...CTCTCTCCAGCCTCTTTGGCGACCTCTGGTTAGCTTTGTGTCTGCCATGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGGCTGCTGCTCCCAGCTaGCTGCCCTATCACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EKATINKWCRPLGRLSRVAAAPS*LPYHSH Trigger: ATGGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAGC...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGCAACAATAAATAAGTGGTGCCGTCCCTTGGGCCGTCTGTCCAGGGTGTGTAGCTCGGTGAGGTaGCTGCTGCTCCCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKATINKWCRPLGRLSRVCSSVR*LLLPAC Trigger: GCAAGCTGGGAGCAGCAGCAACCTCACCGAGCTACA...CACCCTGGACAGACGGCCCAAGGGACGGCACCACTTATTTATTGTTGCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS CCA 90 bp | GGTTTCCCCACTGCTGTCAGATTCCGACACCTGGTAGGTGAGATCTaGCTCTTCAAAGCCAGTGGCACTCATTCTCTGGTCTGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFPTAVRFRHLVGEI*LFKASGTHSLVCGG Trigger: CCCACCACAGACCAGAGAATGAGTGCCACTGGCTTTGAAGAGCCAGATCTCACCTACCAGGTGTCGGAATCTGACAGCAGTGGGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 90 bp | TGTCCTTGGTTTCCCCACTGCTGTCAGATTCCGACACCTGGTAGGTaGGATCTGGCTCTTCAAAGCCAGTGGCACTCATTCTCTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPWFPHCCQIPTPGR*DLALQSQWHSFSGL Trigger: CAGACCAGAGAATGAGTGCCACTGGCTTTGAAGAGCCAGATCTCACCTACCAGGTGTCGGAATCTGACAGCAGTGGGGAAACCAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | GCTCCTCCTCCTCGCCGGACTCGGAGTCGCCCTCGCTaGCGCTGTAGAGGGCCCCGGCGGTGGGCGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APPPRRTRSRPR*RCRGPRRWAPL Trigger: CAGCGGCGCCCACCGCCGGGGCCCTCTACAGCGGCAGCGAGGGCGACTCCGAGTCCGGCGAGGAGGAGGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | GCCCCACCAGGCATGAGGGTGAAGCTGGTAGGCAGCTaGATAAGGCCCCCAGAGGAGACAGGGCCGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: APPGMRVKLVGS*IRPPEETGPLP Trigger: AGGCAGCGGCCCTGTCTCCTCTGGGGGCCTTATGCAGCTGCCTACCAGCTTCACCCTCATGCCTGGTGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | GCCAGTGGCACTCATTCTCTGGTCTGTGGTGGGGTCTaGGCGGGGCGGAGAGTCTGGCGAGTTGAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGTHSLVCGGV*AGRRVWRVEAG Trigger: ACCTGCCTCAACTCGCCAGACTCTCCGCCCCGCTCAGACCCCACCACAGACCAGAGAATGAGTGCCACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | CGGGCAACGTCACTGTCCCGCTGGAGGAGGTCTGCGTaGGGTCTGTGCTGCTGTCACGAGAGGGAGACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RATSLSRWRRSA*GLCCCHERETL Trigger: AAGCGTCTCCCTCTCGTGACAGCAGCACAGACCTCACGCAGACCTCCTCCAGCGGGACAGTGACGTTGCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | GAGGGACACCACCTGTCCCGCTGGAGGAGGTCTGCGTaGGGTCTGTGCTGCTGTCACGAGAGGGAGACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EGHHLSRWRRSA*GLCCCHERETL Trigger: AAGCGTCTCCCTCTCGTGACAGCAGCACAGACCTCACGCAGACCTCCTCCAGCGGGACAGGTGGTGTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233104.2 |
||
| CDS CAA 90 bp | AGCTGCATAAGGCCCCCAGAGGAGACAGGGCCGCTGCCTGTACTCTaGAGCACAGTCCCGTTGGCACTGCTGACAGCGCTGGGGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SCIRPPEETGPLPVL*STVPLALLTALGLT Trigger: TGTCAGCCCCAGCGCTGTCAGCAGTGCCAACGGGACTGTGCTCAAGAGTACAGGCAGCGGCCCTGTCTCCTCTGGGGGCCTTATGCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CAA 90 bp | GGAGGTCTGCGTGAGGTCTGTGCTGCTGTCACGAGAGGGAGACGCTaGCTGTGGGGCCTGGTGCACATGAATGGCCTGCACAGGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLREVCAAVTRGRR*LWGLVHMNGLHRDL Trigger: CAGGTCCCTGTGCAGGCCATTCATGTGCACCAGGCCCCACAGCAAGCGTCTCCCTCTCGTGACAGCAGCACAGACCTCACGCAGACCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS CAA 90 bp | CCAGAGGAGACAGGGCCGCTGCCTGTACTCTTGAGCACAGTCCCGTaGGCACTGCTGACAGCGCTGGGGCTGACACTAGCAGACACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PEETGPLPVLLSTVP*ALLTALGLTLADTG Trigger: ACCAGTGTCTGCTAGTGTCAGCCCCAGCGCTGTCAGCAGTGCCAACGGGACTGTGCTCAAGAGTACAGGCAGCGGCCCTGTCTCCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | GAGCGGGGCGGAGAGTCTGGCGAGTTGAGGCAGGTCTaGATCAGCGCCTTGCCGGTCTCACTGGTGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: ERGGESGELRQV*ISALPVSLVIM Trigger: CATGATCACCAGTGAGACCGGCAAGGCGCTGATTCAGACCTGCCTCAACTCGCCAGACTCTCCGCCCCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | TGTGGCCACCCACAGTTGTGGGTACAGACGACGTCATaGTGGTGGCGGGCAACGTCACTGTCCCGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGHPQLWVQTTS*WWRATSLSRWR Trigger: CCTCCAGCGGGACAGTGACGTTGCCCGCCACCATCATGACGTCGTCTGTACCCACAACTGTGGGTGGCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | CTGGACCTGGCTGTGGGACACCTGCATGGTGGATGGTaGCTGAGAGAAGGCATTGAGCACGGTGAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LDLAVGHLHGGW*LREGIEHGEAA Trigger: GGCAGCCTCACCGTGCTCAATGCCTTCTCTCAGGCACCATCCACCATGCAGGTGTCCCACAGCCAGGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | AACTGCAGAGACAGGGATCTGCACGGTCCCAGACGGTaGTGTCAGGAACACCTGAGGGACACCACCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NCRDRDLHGPRR*CQEHLRDTTWL Trigger: GAGCCAGGTGGTGTCCCTCAGGTGTTCCTGACAGCACCGTCTGGGACCGTGCAGATCCCTGTCTCTGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | AACTGCAGAGACAGGGATCTGCACGGTCCCAGACGGTaGTGTCAGGAACACCTGAGGGACACCACCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NCRDRDLHGPRR*CQEHLRDTTCP Trigger: GGGACAGGTGGTGTCCCTCAGGTGTTCCTGACAGCACCGTCTGGGACCGTGCAGATCCCTGTCTCTGCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233104.2 |
||
| CDS CCA 72 bp | GCTCTTCAAAGCCAGTGGCACTCATTCTCTGGTCTGTaGTGGGGTCTGAGCGGGGCGGAGAGTCTGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALQSQWHSFSGL*WGLSGAESLAS Trigger: ACTCGCCAGACTCTCCGCCCCGCTCAGACCCCACCACAGACCAGAGAATGAGTGCCACTGGCTTTGAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | CTCCTGGACCTGGCTGTGGGACACCTGCATGGTGGATaGTGCCTGAGAGAAGGCATTGAGCACGGTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLDLAVGHLHGG*CLREGIEHGEA Trigger: AGCCTCACCGTGCTCAATGCCTTCTCTCAGGCACCATCCACCATGCAGGTGTCCCACAGCCAGGTCCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CAA 72 bp | GTGGCATCCAGGTTCACCACCTGTAGCTCGGTGAGGTaGCTGCTGCTCCCAGCTTGCTGCCCTATCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VASRFTTCSSVR*LLLPACCPITA Trigger: GGCTGTGATAGGGCAGCAAGCTGGGAGCAGCAGCAACCTCACCGAGCTACAGGTGGTGAACCTGGATGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015749.7 ENSMUST00000233104.2 |
||
| CDS CAA 90 bp | TGGTGCCAGGTAGTTGGTGATGGGGAAGGAGGGGCCGCTGCTGACTaGCATGGTGGTAGAGGTGCTGGGTGCTGTCTGGATTGTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WCQVVGDGEGGAAAD*HGGRGAGCCLDCGG Trigger: ACCTCCACAATCCAGACAGCACCCAGCACCTCTACCACCATGCAAGTCAGCAGCGGCCCCTCCTTCCCCATCACCAACTACCTGGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | TGCGGGTGGCAAAGGTATACACATGGCCTGTCTCACTaGCCACCAGCAACAGCACCTGTGTCCCTGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CGWQRYTHGLSH*PPATAPVSLSA Trigger: CGCTGACAGGGACACAGGTGCTGTTGCTGGTGGCCAGTGAGACAGGCCATGTGTATACCTTTGCCACCCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | GGCAGGTCTGAATCAGCGCCTTGCCGGTCTCACTGGTaGTCATGGGCTGCAGTTTGCGGGTGGCAAAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GRSESAPCRSHW*SWAAVCGWQRY Trigger: ATACCTTTGCCACCCGCAAACTGCAGCCCATGATCACCAGTGAGACCGGCAAGGCGCTGATTCAGACCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | GGAGGTGGTACCCGGCAGGTTGGTGACTGTGAATGCTaGCTTCAGTGTGTCCTTGGTTTCCCCACTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGGTRQVGDCEC*LQCVLGFPTAV Trigger: GACAGCAGTGGGGAAACCAAGGACACACTGAAGCCAGCATTCACAGTCACCAACCTGCCGGGTACCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | CTGACTTGCATGGTGGTAGAGGTGCTGGGTGCTGTCTaGATTGTGGAGGTGGTACCCGGCAGGTTGGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LTCMVVEVLGAV*IVEVVPGRLVT Trigger: AGTCACCAACCTGCCGGGTACCACCTCCACAATCCAGACAGCACCCAGCACCTCTACCACCATGCAAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | ATCAGCGCCTTGCCGGTCTCACTGGTGATCATGGGCTaGAGTTTGCGGGTGGCAAAGGTATACACATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISALPVSLVIMG*SLRVAKVYTWP Trigger: AGGCCATGTGTATACCTTTGCCACCCGCAAACTGCAGCCCATGATCACCAGTGAGACCGGCAAGGCGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS GCA 72 bp | TGTGGAGGTGGTACCCGGCAGGTTGGTGACTGTGAATaGTGGCTTCAGTGTGTCCTTGGTTTCCCCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CGGGTRQVGDCE*WLQCVLGFPTA Trigger: AGCAGTGGGGAAACCAAGGACACACTGAAGCCAGCATTCACAGTCACCAACCTGCCGGGTACCACCTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | ATGGGCTGCAGTTTGCGGGTGGCAAAGGTATACACATaGCCTGTCTCACTGGCCACCAGCAACAGCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MGCSLRVAKVYT*PVSLATSNSTC Trigger: ACAGGTGCTGTTGCTGGTGGCCAGTGAGACAGGCCATGTGTATACCTTTGCCACCCGCAAACTGCAGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CAA 72 bp | GCCTTGCCGGTCTCACTGGTGATCATGGGCTGCAGTTaGCGGGTGGCAAAGGTATACACATGGCCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPVSLVIMGCS*RVAKVYTWPVS Trigger: TGAGACAGGCCATGTGTATACCTTTGCCACCCGCAAACTGCAGCCCATGATCACCAGTGAGACCGGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | GCATACATCACTGCATGGGGACTAGGGTACATCATGTaGCCACCCACAGTTGTGGGTACAGACGACGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: AYITAWGLGYIM*PPTVVGTDDVM Trigger: CATGACGTCGTCTGTACCCACAACTGTGGGTGGCCACATGATGTACCCTAGTCCCCATGCAGTGATGTATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS TCA 72 bp | TTTCCCCACTGCTGTCAGATTCCGACACCTGGTAGGTaGGATCTGGCTCTTCAAAGCCAGTGGCACTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FPHCCQIPTPGR*DLALQSQWHSF Trigger: GAATGAGTGCCACTGGCTTTGAAGAGCCAGATCTCACCTACCAGGTGTCGGAATCTGACAGCAGTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||
| CDS CCA 72 bp | ACTGCTGTCAGATTCCGACACCTGGTAGGTGAGATCTaGCTCTTCAAAGCCAGTGGCACTCATTCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TAVRFRHLVGEI*LFKASGTHSLV Trigger: GACCAGAGAATGAGTGCCACTGGCTTTGAAGAGCCAGATCTCACCTACCAGGTGTCGGAATCTGACAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015749.7 |
||