Pregenerated sensors for SRD5A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029233Ensembl transcript IDs: ENSMUST00000031143.13, ENSMUST00000113506.2, ENSMUST00000113507.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | CGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAATAACGCCTCGCGCAGAAAGTGTACTTTaGTCTCTGTCTCAGTGCCTC | + |
Preference number: 2 (lower is better) Translates to: RSCKPRSAGMCSPGITPRAESVL*SLSQCL Trigger: GAGGCACTGAGACAGAGACCAAAGTACACTTTCTGC...GCGAGGCGTTATTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR-3UTR CCA 90 bp | ATGCACAGCTGTTTATACTGGTTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGCAGAAAGTGTACTTTaGTCTCTGTCTCAGTGCCTC | + |
Preference number: 2 (lower is better) Translates to: MHSCLYWLVRPESSLETPAESVL*SLSQCL Trigger: GAGGCACTGAGACAGAGACCAAAGTACACTTTCTGC...GGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCAGTATAAACAGCTGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR CAA 90 bp | TCCATGCACAGCTGTTTATACTGGTTAGTGCGGCCAGAAAGCAGTTaGGAGACACCCGTTTACTTGTTATCAGTTAGCTCTGTAAAGCTT | + |
Preference number: 2 (lower is better) Translates to: SMHSCLYWLVRPESS*ETPVYLLSVSSVKL Trigger: AAGCTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCAGTATAAACAGCTGTGCATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR CAA 90 bp | CAAAAAGAGAATTCCATCAAAGAAGTTTCTAAACTTATTATTAGGTaGGTTGCAGGGCAAGTGAGGGAGTGGGGCTATAACGGGAGATAT | + |
Preference number: 2 (lower is better) Translates to: QKENSIKEVSKLIIR*VAGQVREWGYNGRY Trigger: ATATCTCCCGTTATAGCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGAAACTTCTTTGATGGAATTCTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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3UTR-3UTR CAA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAACGCAGAAAGTGTACTTaGGTCTCTGTCTCAGTGCCT | + |
Preference number: 3 (lower is better) Translates to: WQKADPASLGLLECVLQERRKCT*VSVSVP Trigger: AGGCACTGAGACAGAGACCAAAGTACACTTTCTGCG...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTCGCAGAAAGTGTACTTaGGTCTCTGTCTCAGTGCCT | + |
Preference number: 3 (lower is better) Translates to: ERERERLTQACMYPCTAVRRKCT*VSVSVP Trigger: AGGCACTGAGACAGAGACCAAAGTACACTTTCTGCG...AACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR CCA 72 bp | TCAAGCATGCATGTATCCATGCACAGCTGTTTATACTaGTTAGTGCGGCCAGAAAGCAGTTTGGAGACACCC | + |
Preference number: 3 (lower is better) Translates to: SSMHVSMHSCLY*LVRPESSLETP Trigger: GGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCAGTATAAACAGCTGTGCATGGATACATGCATGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR-3UTR CAA 90 bp | GAAGTTTCTAAACTTATTATTAGGTTGGTTGCAGGGCAAGTGAGGGAGTGGGGCCGCAGAAAGTGTACTTaGGTCTCTGTCTCAGTGCCT | + |
Preference number: 3 (lower is better) Translates to: EVSKLIIRLVAGQVREWGRRKCT*VSVSVP Trigger: AGGCACTGAGACAGAGACCAAAGTACACTTTCTGCG...GCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGAAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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3UTR CCA 72 bp | AGAATGTTAACTCACTCCAACAAACTCTTTACTCCCTaGAACCACCGGTCTGATACTGTACATTCATATTAT | + |
Preference number: 3 (lower is better) Translates to: RMLTHSNKLFTP*NHRSDTVHSYY Trigger: ATAATATGAATGTACAGTATCAGACCGGTGGTTCCAGGGAGTAAAGAGTTTGTTGGAGTGAGTTAACATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR GCA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAACCAAAGGGGATCCGGTaGTGGCAGTGGATGACCACA | + |
Preference number: 4 (lower is better) Translates to: WQKADPASLGLLECVLQEPKGIR*WQWMTT Trigger: TGTGGTCATCCACTGCCAGCACCGGATCCCCTTTGG...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | CGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAATAACGCCTCGCCACCAGGTTAAGTTGTaGAGCCCAAAGGTGACAGCC | + |
Preference number: 4 (lower is better) Translates to: RSCKPRSAGMCSPGITPRHQVKL*SPKVTA Trigger: GGCTGTCACCTTTGGGCTCCACAACTTAACCTGGTG...GCGAGGCGTTATTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR TCA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAATGTGGAGCCCAAAGGTaGCAGCCATGGAGATGTAGA | + |
Preference number: 4 (lower is better) Translates to: WQKADPASLGLLECVLQECGAQR*QPWRCR Trigger: TCTACATCTCCATGGCTGTCACCTTTGGGCTCCACA...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | GTGCAGTTAACTGTTCCCACAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCAAAGGGGATCCGGTaGTGGCAGTGGATGACCACA | + |
Preference number: 4 (lower is better) Translates to: VQLTVPTAREREREREREPKGIR*WQWMTT Trigger: TGTGGTCATCCACTGCCAGCACCGGATCCCCTTTGG...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGTGGGAACAGTTAACTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | ATGCACAGCTGTTTATACTGGTTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCCCAAAGGGGATCCGGTaGTGGCAGTGGATGACCACA | + |
Preference number: 4 (lower is better) Translates to: MHSCLYWLVRPESSLETPPKGIR*WQWMTT Trigger: TGTGGTCATCCACTGCCAGCACCGGATCCCCTTTGG...GGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCAGTATAAACAGCTGTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | ACTCACTCCAACAAACTCTTTACTCCCTGGAACCACCGGTCTGATACTGTACATGCGAGCCGGACTGCTTaGTCTTCCCGTAGCGGAGCA | + |
Preference number: 4 (lower is better) Translates to: THSNKLFTPWNHRSDTVHASRTA*SSRSGA Trigger: TGCTCCGCTACGGGAAGACCAAGCAGTCCGGCTCGC...ATGTACAGTATCAGACCGGTGGTTCCAGGGAGTAAAGAGTTTGTTGGAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTAGCCAGCTCAGCCGCTaGCATCCGAGAAGCCTTGGA | + |
Preference number: 4 (lower is better) Translates to: ERERERLTQACMYPCTAVSQLSR*HPRSLG Trigger: TCCAAGGCTTCTCGGATGCCAGCGGCTGAGCTGGCT...AACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAACTTGTGGTTGAAGAATaGGGACAAGGCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: WQKADPASLGLLECVLQELVVEE*GQGLAG Trigger: TCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAG...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAAAGCACTAAGCCAGTTTaGAAAAGGTGCTCCCAGGAA | + |
Preference number: 4 (lower is better) Translates to: WQKADPASLGLLECVLQESTKPV*KRCSQE Trigger: TTCCTGGGAGCACCTTTTCCAAACTGGCTTAGTGCT...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CCA 90 bp | CGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAATAACGCCTCGCCATTCTTATCATCCATaGGCACTTGGCTCAGTACAG | + |
Preference number: 4 (lower is better) Translates to: RSCKPRSAGMCSPGITPRHSYHP*ALGSVQ Trigger: CTGTACTGAGCCAAGTGCCCATGGATGATAAGAATG...GCGAGGCGTTATTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | GTGCAGTTAACTGTTCCCACAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGGACAAGGCTTGGCTaGAGAAGACATACGTCACCA | + |
Preference number: 4 (lower is better) Translates to: VQLTVPTARERERERERERTRLG*RRHTSP Trigger: TGGTGACGTATGTCTTCTCCAGCCAAGCCTTGTCCG...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGTGGGAACAGTTAACTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | GTGCAGTTAACTGTTCCCACAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAACATCACCATaGCCAGGATGTGGAACCACC | + |
Preference number: 4 (lower is better) Translates to: VQLTVPTARERERERERERRTSP*PGCGTT Trigger: GGTGGTTCCACATCCTGGGCATGGTGATGTTCTTCT...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGTGGGAACAGTTAACTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | TTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCGCATCCGAGAAGCCTTaGACTCCATCTCCAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: LVRPESSLETPVYLLSVSASEKP*TPSPGL Trigger: AAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGC...GCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CCA 90 bp | CCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCTCTGTAAAGAGCCAGCTCAGCCGCTaGCATCCGAGAAGCCTTGGA | + |
Preference number: 4 (lower is better) Translates to: PESSLETPVYLLSVSSVKSQLSR*HPRSLG Trigger: TCCAAGGCTTCTCGGATGCCAGCGGCTGAGCTGGCT...CTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATCCCAGGAACAACGACTaGGAAAGTAGCCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: RERERLTQACMYPCTAVYPRNND*ESSQSR Trigger: CCTGCTCTGGCTACTTTCTCAGTCGTTGTTCCTGGG...ATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR TCA 90 bp | TTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCTGTGGAGCCCAAAGGTaGCAGCCATGGAGATGTAGA | + |
Preference number: 4 (lower is better) Translates to: LVRPESSLETPVYLLSVSCGAQR*QPWRCR Trigger: TCTACATCTCCATGGCTGTCACCTTTGGGCTCCACA...GCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | TTAACTGTTCCCACAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCACCAGGTTAAGTTGTaGAGCCCAAAGGTGACAGCC | + |
Preference number: 4 (lower is better) Translates to: LTVPTARERERERERERDHQVKL*SPKVTA Trigger: GGCTGTCACCTTTGGGCTCCACAACTTAACCTGGTG...ATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGTGGGAACAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | TGGTTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTCGGACAAGGCTTGGCTaGAGAAGACATACGTCACCA | + |
Preference number: 4 (lower is better) Translates to: WLVRPESSLETPVYLLSVRTRLG*RRHTSP Trigger: TGGTGACGTATGTCTTCTCCAGCCAAGCCTTGTCCG...AACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR TCA 90 bp | GAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTTGTGGAGCCCAAAGGTaGCAGCCATGGAGATGTAGA | + |
Preference number: 4 (lower is better) Translates to: ERERLTQACMYPCTAVYTCGAQR*QPWRCR Trigger: TCTACATCTCCATGGCTGTCACCTTTGGGCTCCACA...AGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | GTGCAGTTAACTGTTCCCACAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACAACGTGAATGGCTaGATTAGAGAAGACACTGAC | + |
Preference number: 4 (lower is better) Translates to: VQLTVPTAREREREREREHNVNG*IREDTD Trigger: GTCAGTGTCTTCTCTAATGCAGCCATTCACGTTGTG...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTGTGGGAACAGTTAACTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | TGGTTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTCTTGTGGTTGAAGAATaGGGACAAGGCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: WLVRPESSLETPVYLLSVLVVEE*GQGLAG Trigger: TCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAG...AACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | TCTAAACTTATTATTAGGTTGGTTGCAGGGCAAGTGAGGGAGTGGGGCTATAACCACCAGGTTAAGTTGTaGAGCCCAAAGGTGACAGCC | + |
Preference number: 4 (lower is better) Translates to: SKLIIRLVAGQVREWGYNHQVKL*SPKVTA Trigger: GGCTGTCACCTTTGGGCTCCACAACTTAACCTGGTG...GTTATAGCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR GCA 90 bp | TCTAAACTTATTATTAGGTTGGTTGCAGGGCAAGTGAGGGAGTGGGGCTATAACCCAGTTTGGAAAAGGTaGTCCCAGGAACAACGACTG | + |
Preference number: 4 (lower is better) Translates to: SKLIIRLVAGQVREWGYNPVWKR*SQEQRL Trigger: CAGTCGTTGTTCCTGGGAGCACCTTTTCCAAACTGG...GTTATAGCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTCACAACGTGAATGGCTaGATTAGAGAAGACACTGAC | + |
Preference number: 4 (lower is better) Translates to: ERERERLTQACMYPCTAVHNVNG*IREDTD Trigger: GTCAGTGTCTTCTCTAATGCAGCCATTCACGTTGTG...AACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATCTTGTGGTTGAAGAATaGGGACAAGGCTTGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RERERLTQACMYPCTAVYLVVEE*GQGLAG Trigger: TCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAG...ATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | CCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCTCTGTAAAGCGGACAAGGCTTGGCTaGAGAAGACATACGTCACCA | + |
Preference number: 4 (lower is better) Translates to: PESSLETPVYLLSVSSVKRTRLG*RRHTSP Trigger: TGGTGACGTATGTCTTCTCCAGCCAAGCCTTGTCCG...CTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR CAA 72 bp | GTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTaGTTATCAGTTAGCTCTGTAAAGCTTGGCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: VRPESSLETPVY*LSVSSVKLGRK Trigger: CTTTCTGCCAAGCTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | ACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTGGTTAGTGCGGCACAACGTGAATGGCTaGATTAGAGAAGACACTGAC | + |
Preference number: 4 (lower is better) Translates to: TDSSMHVSMHSCLYWLVRHNVNG*IREDTD Trigger: GTCAGTGTCTTCTCTAATGCAGCCATTCACGTTGTG...CCGCACTAACCAGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CCA 90 bp | ACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTGGTTAGTGCGGCATTCTTATCATCCATaGGCACTTGGCTCAGTACAG | + |
Preference number: 4 (lower is better) Translates to: TDSSMHVSMHSCLYWLVRHSYHP*ALGSVQ Trigger: CTGTACTGAGCCAAGTGCCCATGGATGATAAGAATG...CCGCACTAACCAGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | TTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCGGTAGGAGACAAATGTaGTTCTGTAGAACTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: LVRPESSLETPVYLLSVSGRRQM*FCRTCG Trigger: ACCACAAGTTCTACAGAAGCACATTTGTCTCCTACC...GCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR GCA 90 bp | TCTAAACTTATTATTAGGTTGGTTGCAGGGCAAGTGAGGGAGTGGGGCTATAACGGTAGGAGACAAATGTaGTTCTGTAGAACTTGTGGT | + |
Preference number: 4 (lower is better) Translates to: SKLIIRLVAGQVREWGYNGRRQM*FCRTCG Trigger: ACCACAAGTTCTACAGAAGCACATTTGTCTCCTACC...GTTATAGCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CCA 90 bp | CCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCTCTGTAAAGCATTCTTATCATCCATaGGCACTTGGCTCAGTACAG | + |
Preference number: 4 (lower is better) Translates to: PESSLETPVYLLSVSSVKHSYHP*ALGSVQ Trigger: CTGTACTGAGCCAAGTGCCCATGGATGATAAGAATG...CTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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3UTR CAA 72 bp | AATTCCATCAAAGAAGTTTCTAAACTTATTATTAGGTaGGTTGCAGGGCAAGTGAGGGAGTGGGGCTATAAC | + |
Preference number: 4 (lower is better) Translates to: NSIKEVSKLIIR*VAGQVREWGYN Trigger: GTTATAGCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGAAACTTCTTTGATGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CCA 90 bp | TCAGCCGCTGGCATCCGAGAAGCCTTGGACTCCATCTCCAGGGCTTaGAACTGTGTGGCCCCAAGAGTTCTGAGCAGAGCACTAAGCCAG | + |
Preference number: 5 (lower is better) Translates to: SAAGIREALDSISRA*NCVAPRVLSRALSQ Trigger: CTGGCTTAGTGCTCTGCTCAGAACTCTTGGGGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCCAGCGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CAA 90 bp | TGGCAGAAAGCCGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAAGAATGCGGACAAGGCTaGGCTGGAGAAGACATACGT | + |
Preference number: 5 (lower is better) Translates to: WQKADPASLGLLECVLQEECGQG*AGEDIR Trigger: ACGTATGTCTTCTCCAGCCAAGCCTTGTCCGCATTC...TTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCGGCTTTCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | CACTCCAACAAACTCTTTACTCCCTGGAACCACCGGTCTGATACTGTACATTCACTCCATCTCCAGGGCTaGGAACTGTGTGGCCCCAAG | + |
Preference number: 5 (lower is better) Translates to: HSNKLFTPWNHRSDTVHSLHLQG*ELCGPK Trigger: CTTGGGGCCACACAGTTCCAAGCCCTGGAGATGGAG...TGAATGTACAGTATCAGACCGGTGGTTCCAGGGAGTAAAGAGTTTGTTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CAA 90 bp | GAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTGGCATCCGAGAAGCCTaGGACTCCATCTCCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: ERERLTQACMYPCTAVYTGIREA*DSISRA Trigger: AGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCC...AGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CAA 90 bp | CGATCCTGCAAGCCTAGGTCTGCTGGAATGTGTTCTCCAGGAATAACGCCTCGCATGACCACACCTTTTTaGTTTCTCCTGAGGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: RSCKPRSAGMCSPGITPRMTTPF*FLLRLL Trigger: CAGCAACCTCAGGAGAAACAAAAAAGGTGTGGTCAT...GCGAGGCGTTATTCCTGGAGAACACATTCCAGCAGACCTAGGCTTGCAGGATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | CACTCCAACAAACTCTTTACTCCCTGGAACCACCGGTCTGATACTGTACATTCAATCATCCATGGGCACTaGGCTCAGTACAGTCAGGCC | + |
Preference number: 5 (lower is better) Translates to: HSNKLFTPWNHRSDTVHSIIHGH*AQYSQA Trigger: GGCCTGACTGTACTGAGCCAAGTGCCCATGGATGAT...TGAATGTACAGTATCAGACCGGTGGTTCCAGGGAGTAAAGAGTTTGTTGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTGAATGCGGACAAGGCTaGGCTGGAGAAGACATACGT | + |
Preference number: 5 (lower is better) Translates to: ERERERLTQACMYPCTAVECGQG*AGEDIR Trigger: ACGTATGTCTTCTCCAGCCAAGCCTTGTCCGCATTC...AACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTCTCTCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | GAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTATCATCCATGGGCACTaGGCTCAGTACAGTCAGGCC | + |
Preference number: 5 (lower is better) Translates to: ERERLTQACMYPCTAVYTIIHGH*AQYSQA Trigger: GGCCTGACTGTACTGAGCCAAGTGCCCATGGATGAT...AGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | GAAGTTTCTAAACTTATTATTAGGTTGGTTGCAGGGCAAGTGAGGGAGTGGGGCAGCCACCAGGTTAAGTaGTGGAGCCCAAAGGTGACA | + |
Preference number: 5 (lower is better) Translates to: EVSKLIIRLVAGQVREWGSHQVK*WSPKVT Trigger: TGTCACCTTTGGGCTCCACAACTTAACCTGGTGGCT...GCCCCACTCCCTCACTTGCCCTGCAACCAACCTAATAATAAGTTTAGAAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS-3UTR CAA 90 bp | TTAGTGCGGCCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCAGCCACCAGGTTAAGTaGTGGAGCCCAAAGGTGACA | + |
Preference number: 5 (lower is better) Translates to: LVRPESSLETPVYLLSVSSHQVK*WSPKVT Trigger: TGTCACCTTTGGGCTCCACAACTTAACCTGGTGGCT...GCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | ACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTGGTTAGTGCGGGAATGCGGACAAGGCTaGGCTGGAGAAGACATACGT | + |
Preference number: 5 (lower is better) Translates to: TDSSMHVSMHSCLYWLVRECGQG*AGEDIR Trigger: ACGTATGTCTTCTCCAGCCAAGCCTTGTCCGCATTC...CCGCACTAACCAGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | CCAGAAAGCAGTTTGGAGACACCCGTTTACTTGTTATCAGTTAGCTCTGTAAAGATCATCCATGGGCACTaGGCTCAGTACAGTCAGGCC | + |
Preference number: 5 (lower is better) Translates to: PESSLETPVYLLSVSSVKIIHGH*AQYSQA Trigger: GGCCTGACTGTACTGAGCCAAGTGCCCATGGATGAT...CTTTACAGAGCTAACTGATAACAAGTAAACGGGTGTCTCCAAACTGCTTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS TCA 90 bp | TATGCTTTGGGTAGGAGACAAATGTGCTTCTGTAGAACTTGTGGTTaGAGAATGCGGACAAGGCTTGGCTGGAGAAGACATACGTCACCA | + |
Preference number: 5 (lower is better) Translates to: YALGRRQMCFCRTCG*RMRTRLGWRRHTSP Trigger: TGGTGACGTATGTCTTCTCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAGTTCTACAGAAGCACATTTGTCTCCTACCCAAAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | ACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTGGTTAGTGCGGATGACCACACCTTTTTaGTTTCTCCTGAGGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: TDSSMHVSMHSCLYWLVRMTTPF*FLLRLL Trigger: CAGCAACCTCAGGAGAAACAAAAAAGGTGTGGTCAT...CCGCACTAACCAGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS-3UTR CAA 90 bp | GAGAGAGAGAGACTGACTCAAGCATGCATGTATCCATGCACAGCTGTTTATACTATGACCACACCTTTTTaGTTTCTCCTGAGGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: ERERLTQACMYPCTAVYTMTTPF*FLLRLL Trigger: CAGCAACCTCAGGAGAAACAAAAAAGGTGTGGTCAT...AGTATAAACAGCTGTGCATGGATACATGCATGCTTGAGTCAGTCTCTCTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS CCA 72 bp | ACAGAGCCAGCTCAGCCGCTGGCATCCGAGAAGCCTTaGACTCCATCTCCAGGGCTTGGAACTGTGTGGCCC | + |
Preference number: 6 (lower is better) Translates to: TEPAQPLASEKP*TPSPGLGTVWP Trigger: GGGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCCAGCGGCTGAGCTGGCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CAA 72 bp | GACAGAGCCAGCTCAGCCGCTGGCATCCGAGAAGCCTaGGACTCCATCTCCAGGGCTTGGAACTGTGTGGCC | + |
Preference number: 6 (lower is better) Translates to: DRASSAAGIREA*DSISRAWNCVA Trigger: GGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCCAGCGGCTGAGCTGGCTCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CAA 90 bp | CTCAGCCGCTGGCATCCGAGAAGCCTTGGACTCCATCTCCAGGGCTaGGAACTGTGTGGCCCCAAGAGTTCTGAGCAGAGCACTAAGCCA | + |
Preference number: 6 (lower is better) Translates to: LSRWHPRSLGLHLQG*ELCGPKSSEQSTKP Trigger: TGGCTTAGTGCTCTGCTCAGAACTCTTGGGGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCCAGCGGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CCA 72 bp | GGCATCCGAGAAGCCTTGGACTCCATCTCCAGGGCTTaGAACTGTGTGGCCCCAAGAGTTCTGAGCAGAGCA | + |
Preference number: 6 (lower is better) Translates to: GIREALDSISRA*NCVAPRVLSRA Trigger: TGCTCTGCTCAGAACTCTTGGGGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CAA 72 bp | TGGCATCCGAGAAGCCTTGGACTCCATCTCCAGGGCTaGGAACTGTGTGGCCCCAAGAGTTCTGAGCAGAGC | + |
Preference number: 6 (lower is better) Translates to: WHPRSLGLHLQG*ELCGPKSSEQS Trigger: GCTCTGCTCAGAACTCTTGGGGCCACACAGTTCCAAGCCCTGGAGATGGAGTCCAAGGCTTCTCGGATGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS TCA 72 bp | CCACCAGCCACCAGGTTAAGTTGTGGAGCCCAAAGGTaGCAGCCATGGAGATGTAGATCATCAGCTCTGCTA | + |
Preference number: 6 (lower is better) Translates to: PPATRLSCGAQR*QPWRCRSSALL Trigger: TAGCAGAGCTGATGATCTACATCTCCATGGCTGTCACCTTTGGGCTCCACAACTTAACCTGGTGGCTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS CCA 72 bp | GGCCCCAAGAGTTCTGAGCAGAGCACTAAGCCAGTTTaGAAAAGGTGCTCCCAGGAACAACGACTGAGAAAG | + |
Preference number: 6 (lower is better) Translates to: GPKSSEQSTKPV*KRCSQEQRLRK Trigger: CTTTCTCAGTCGTTGTTCCTGGGAGCACCTTTTCCAAACTGGCTTAGTGCTCTGCTCAGAACTCTTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031143.13 |
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CDS CAA 72 bp | TCTGTAGAACTTGTGGTTGAAGAATGCGGACAAGGCTaGGCTGGAGAAGACATACGTCACCACCAGCCACCA | + |
Preference number: 6 (lower is better) Translates to: SVELVVEECGQG*AGEDIRHHQPP Trigger: TGGTGGCTGGTGGTGACGTATGTCTTCTCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAGTTCTACAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |
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CDS TCA 72 bp | GGTAGGAGACAAATGTGCTTCTGTAGAACTTGTGGTTaGAGAATGCGGACAAGGCTTGGCTGGAGAAGACAT | + |
Preference number: 6 (lower is better) Translates to: GRRQMCFCRTCG*RMRTRLGWRRH Trigger: ATGTCTTCTCCAGCCAAGCCTTGTCCGCATTCTTCAACCACAAGTTCTACAGAAGCACATTTGTCTCCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031143.13 ENSMUST00000113506.2 ENSMUST00000113507.8 |