Pregenerated sensors for SRD5A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038541Ensembl transcript IDs: ENSMUST00000043458.9
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGCTCACCTACATTTCTCCTGCTGCTTCCCTTCCTCCCTCTCTaGTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: PCSPTFLLLLPFLPL*FHATQFISLFFLLL Trigger: GAGGAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAAGGGAAGCAGCAGGAGAAATGTAGGTGAGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCCTCTCTGCTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCTTCTCCATAGAAGCTTaGTTCCTTAAAGTTAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: FLPLCFHATQFISLFFLLFSIEA*FLKVRV Trigger: AACCCTAACTTTAAGGAACAAAGCTTCTATGGAGAA...GAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR GCA 90 bp | TTCCTCCCTCTCTGCTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCGAACCAGGCTATGCGTaGGGGCAGGAGGGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: FLPLCFHATQFISLFFLLEPGYA*GQEGNS Trigger: GGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTC...GAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CCA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGGGATCAGGGTCCCCATaGTGGCCAATGTGGCGCTAC | + |
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Preference number: 4 (lower is better) Translates to: KMAPMSLRKEIRLELSGQGSGSP*WPMWRY Trigger: GTAGCGCCACATTGGCCACCATGGGGACCCTGATCC...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR GCA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGAAGGAAGGCAGCTCCTaGAGGAACCAGGCTATGCGT | + |
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Preference number: 4 (lower is better) Translates to: KMAPMSLRKEIRLELSGQKEGSS*RNQAMR Trigger: ACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTT...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR GCA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGCCTGTGGAAGTAATGTaGGGAGAAGAGACCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KMAPMSLRKEIRLELSGQPVEVM*GEETQQ Trigger: CTGCTGGGTCTCTTCTCCGCACATTACTTCCACAGG...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CCA 90 bp | TTCCTCCCTCTCTGCTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCCTGGAACAGACCAAGTaGCCAAAGCGTAGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: FLPLCFHATQFISLFFLLLEQTK*PKRSPS Trigger: GGATGGGCTACGCTTTGGCCACTTGGTCTGTTCCAG...GAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CCA 90 bp | TTCCTCCCTCTCTGCTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCTGTGTTTCCCGTAACTaGCGGGTTTCCCAAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: FLPLCFHATQFISLFFLLCVSRN*RVSQST Trigger: TGTGCTTTGGGAAACCCGCCAGTTACGGGAAACACA...GAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CCA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGCTATGCAGAAGGCAGTaGCTTTCAGAAAGATCACCG | + |
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Preference number: 4 (lower is better) Translates to: KMAPMSLRKEIRLELSGQLCRRQ*LSERSP Trigger: CGGTGATCTTTCTGAAAGCCACTGCCTTCTGCATAG...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR TCA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGGCCTCTGGTGAGCAATaGGTAAATAAATGTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KMAPMSLRKEIRLELSGQASGEQ*VNKCPV Trigger: CACAGGACATTTATTTACTCATTGCTCACCAGAGGC...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR GCA 90 bp | TATAGTTTACAGTTTATAGTTTCAGCAGCTGGGCAGTTTCTCCATAGAAGCTTTGGAGTCCGTTCCCTATaGAGAAGGCAGTGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YSLQFIVSAAGQFLHRSFGVRSL*RRQWLS Trigger: TGAAAGCCACTGCCTTCTGCATAGGGAACGGACTCC...AAAGCTTCTATGGAGAAACTGCCCAGCTGCTGAAACTATAAACTGTAAACTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CCA 90 bp | TATAGTTTACAGTTTATAGTTTCAGCAGCTGGGCAGTTTCTCCATAGAAGCTTTTGCAAAAGCAAAGGCTaGAACAGACCAAGTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: YSLQFIVSAAGQFLHRSFCKSKG*NRPSGQ Trigger: TTGGCCACTTGGTCTGTTCCAGCCTTTGCTTTTGCA...AAAGCTTCTATGGAGAAACTGCCCAGCTGCTGAAACTATAAACTGTAAACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 90 bp | TGCCAAGCGAGCATCCCTACCGACACCACAAAGGAAGGCAGCTCCTaGAGGAACCAGGCTATGCGTGCGGGCAGGAGGGGAACTCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: CQASIPTDTTKEGSS*RNQAMRAGRRGTPD Trigger: GTCGGGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTTGTGGTGTCGGTAGGGATGCTCGCTTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 90 bp | AGACCCAGCAGCACATTCCCCGGAGGTCCAAAGAGGGAGCGCGGCTaGCAAGCGAGCATCCCTACCGACACCACAAAGGAAGGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RPSSTFPGGPKRERG*QASIPTDTTKEGSS Trigger: GGAGCTGCCTTCCTTTGTGGTGTCGGTAGGGATGCTCGCTTGGCAGCCGCGCTCCCTCTTTGGACCTCCGGGGAATGTGCTGCTGGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 90 bp | TCCCGTAACTGGCGGGTTTCCCAAAGCACAGGATCAGGGTCCCCATaGTGGCCAATGTGGCGCTACCTGCCAGCACCGGGACCTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: SRNWRVSQSTGSGSP*WPMWRYLPAPGPDG Trigger: GCCATCAGGTCCCGGTGCTGGCAGGTAGCGCCACATTGGCCACCATGGGGACCCTGATCCTGTGCTTTGGGAAACCCGCCAGTTACGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 90 bp | CTACCGACACCACAAAGGAAGGCAGCTCCTGCAGGAACCAGGCTATaGGTGCGGGCAGGAGGGGAACTCCCGACGACACACTCTCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LPTPQRKAAPAGTRL*VRAGGELPTTHSRC Trigger: ACAGCGAGAGTGTGTCGTCGGGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTTGTGGTGTCGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 90 bp | CGGGTTTCCCAAAGCACAGGATCAGGGTCCCCATGGTGGCCAATGTaGCGCTACCTGCCAGCACCGGGACCTGATGGCACACAATCGGCA | + |
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Preference number: 5 (lower is better) Translates to: RVSQSTGSGSPWWPM*RYLPAPGPDGTQSA Trigger: TGCCGATTGTGTGCCATCAGGTCCCGGTGCTGGCAGGTAGCGCCACATTGGCCACCATGGGGACCCTGATCCTGTGCTTTGGGAAACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 90 bp | CGTAACTGGCGGGTTTCCCAAAGCACAGGATCAGGGTCCCCATGGTaGCCAATGTGGCGCTACCTGCCAGCACCGGGACCTGATGGCACA | + |
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Preference number: 5 (lower is better) Translates to: RNWRVSQSTGSGSPW*PMWRYLPAPGPDGT Trigger: TGTGCCATCAGGTCCCGGTGCTGGCAGGTAGCGCCACATTGGCCACCATGGGGACCCTGATCCTGTGCTTTGGGAAACCCGCCAGTTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 90 bp | CGACACCACAAAGGAAGGCAGCTCCTGCAGGAACCAGGCTATGCGTaGGGGCAGGAGGGGAACTCCCGACGACACACTCTCGCTGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: RHHKGRQLLQEPGYA*GQEGNSRRHTLAVF Trigger: AAACACAGCGAGAGTGTGTCGTCGGGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTTGTGGTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 90 bp | CCGCGCAATAAACCAGGTAATAGGCTTGCAGGAGTCCGTTCCCTATaGAGAAGGCAGTGGCTTTCAGAAAGATCACCGCTGATAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PRNKPGNRLAGVRSL*RRQWLSERSPLIKA Trigger: GGCCTTTATCAGCGGTGATCTTTCTGAAAGCCACTGCCTTCTGCATAGGGAACGGACTCCTGCAAGCCTATTACCTGGTTTATTGCGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CAA 90 bp | AAAATGGCCCCTATGAGTCTCCGAAAGGAAATTAGGTTAGAGCTCTCTGGGCAGATCTCGCCCAGGAAATaGGCTCCAGACACATACGTA | + |
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Preference number: 5 (lower is better) Translates to: KMAPMSLRKEIRLELSGQISPRK*APDTYV Trigger: TACGTATGTGTCTGGAGCCAATTTCCTGGGCGAGAT...CTGCCCAGAGAGCTCTAACCTAATTTCCTTTCGGAGACTCATAGGGGCCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CAA 90 bp | TTCCTCCCTCTCTGCTTTCATGCGACACAGTTTATTTCCCTCTTCTTCCTTCTCCGTAAACAAGCCACCTaGTGGGATCCTGTAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: FLPLCFHATQFISLFFLLRKQAT*WDPVDD Trigger: GTCATCTACAGGATCCCACAAGGTGGCTTGTTTACG...GAGAAGGAAGAAGAGGGAAATAAACTGTGTCGCATGAAAGCAGAGAGGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS-3UTR CAA 90 bp | TATAGTTTACAGTTTATAGTTTCAGCAGCTGGGCAGTTTCTCCATAGAAGCTTTGTGGTGGTAAAAAGCTaGCATCCCCAGGAAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: YSLQFIVSAAGQFLHRSFVVVKS*HPQETK Trigger: CTTTGTTTCCTGGGGATGCAAGCTTTTTACCACCAC...AAAGCTTCTATGGAGAAACTGCCCAGCTGCTGAAACTATAAACTGTAAACTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 72 bp | CCACAAAGGAAGGCAGCTCCTGCAGGAACCAGGCTATaGGTGCGGGCAGGAGGGGAACTCCCGACGACACAC | + |
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Preference number: 6 (lower is better) Translates to: PQRKAAPAGTRL*VRAGGELPTTH Trigger: GTGTGTCGTCGGGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 72 bp | CGGGTTTCCCAAAGCACAGGATCAGGGTCCCCATGGTaGCCAATGTGGCGCTACCTGCCAGCACCGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: RVSQSTGSGSPW*PMWRYLPAPGP Trigger: AGGTCCCGGTGCTGGCAGGTAGCGCCACATTGGCCACCATGGGGACCCTGATCCTGTGCTTTGGGAAACCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 72 bp | TGGCGGGTTTCCCAAAGCACAGGATCAGGGTCCCCATaGTGGCCAATGTGGCGCTACCTGCCAGCACCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WRVSQSTGSGSP*WPMWRYLPAPG Trigger: TCCCGGTGCTGGCAGGTAGCGCCACATTGGCCACCATGGGGACCCTGATCCTGTGCTTTGGGAAACCCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 72 bp | AAAGGAAGGCAGCTCCTGCAGGAACCAGGCTATGCGTaGGGGCAGGAGGGGAACTCCCGACGACACACTCTC | + |
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Preference number: 6 (lower is better) Translates to: KGRQLLQEPGYA*GQEGNSRRHTL Trigger: GAGAGTGTGTCGTCGGGAGTTCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS GCA 72 bp | AGCATCCCTACCGACACCACAAAGGAAGGCAGCTCCTaGAGGAACCAGGCTATGCGTGCGGGCAGGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SIPTDTTKEGSS*RNQAMRAGRRG Trigger: TCCCCTCCTGCCCGCACGCATAGCCTGGTTCCTGCAGGAGCTGCCTTCCTTTGTGGTGTCGGTAGGGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 72 bp | CTCCCGACGACACACTCTCGCTGTGTTTCCCGTAACTaGCGGGTTTCCCAAAGCACAGGATCAGGGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LPTTHSRCVSRN*RVSQSTGSGSP Trigger: TGGGGACCCTGATCCTGTGCTTTGGGAAACCCGCCAGTTACGGGAAACACAGCGAGAGTGTGTCGTCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CCA 72 bp | CCGGGCTTCCTGAGCTGGCGCAGCATGCAGTCACTGTaGATGTTGATCCCCATCCCCAGAATAAAGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGFLSWRSMQSL*MLIPIPRIKKK Trigger: CTTCTTCTTTATTCTGGGGATGGGGATCAACATCCACAGTGACTGCATGCTGCGCCAGCTCAGGAAGCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CAA 72 bp | CTCAGGGTATTCCGCGCAATAAACCAGGTAATAGGCTaGCAGGAGTCCGTTCCCTATGCAGAAGGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LRVFRAINQVIG*QESVPYAEGSG Trigger: GCCACTGCCTTCTGCATAGGGAACGGACTCCTGCAAGCCTATTACCTGGTTTATTGCGCGGAATACCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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| CDS CAA 90 bp | GTACCACTCCTCAGGGTATTCCGCGCAATAAACCAGGTAATAGGCTaGCAGGAGTCCGTTCCCTATGCAGAAGGCAGTGGCTTTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VPLLRVFRAINQVIG*QESVPYAEGSGFQK Trigger: TTTCTGAAAGCCACTGCCTTCTGCATAGGGAACGGACTCCTGCAAGCCTATTACCTGGTTTATTGCGCGGAATACCCTGAGGAGTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043458.9 |
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