RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SRCAP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053877

Ensembl transcript IDs: ENSMUST00000066582.12, ENSMUST00000098025.11, ENSMUST00000186672.7, ENSMUST00000186954.5, ENSMUST00000187040.7, ENSMUST00000188124.7, ENSMUST00000189136.7, ENSMUST00000190390.7

Found 698 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACTGTTGTTTGAATTGTACCACCTTCTCCACATTGCTCCAGAACTaGCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTG +
Preference number: 1 (lower is better)
Translates to: DCCLNCTTFSTLLQN*LTSLAMVEAIRRSL
Trigger: CAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
3UTR CCA 90 bp CTCGAGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATaGATATTTGCCGCTAAAACAGACTGCTGGGCACTGTTCCGAAAG +
Preference number: 1 (lower is better)
Translates to: LESKSQRVLSSPNIQ*IFAAKTDCWALFRK
Trigger: CTTTCGGAACAGTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
3UTR TCA 90 bp TATATTATATGCATTTTAAGTCCTGGACTTGAACATCTCCAGATTTaGTGCCCACAAGGAGTCCTAAAACAATCACACAAGCACAATGAG +
Preference number: 1 (lower is better)
Translates to: YIICILSPGLEHLQI*CPQGVLKQSHKHNE
Trigger: CTCATTGTGCTTGTGTGATTGTTTTAGGACTCCTTGTGGGCATCAAATCTGGAGATGTTCAAGTCCAGGACTTAAAATGCATATAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
3UTR CAA 90 bp AACTGCCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTaGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTGC +
Preference number: 2 (lower is better)
Translates to: NCLTSLAMVEAIRRS*ACSSLRARSSFCRC
Trigger: GCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
3UTR-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTACCCCCTACTTTGGTaGAAAGGAAGACAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKYPLLW*KGRQPP
Trigger: AGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR CAA 90 bp AATTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTaGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: NCTTFSTLLQNCLTS*AMVEAIRRSLACSS
Trigger: AGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
3UTR-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTACTTTCTTAAAAAGGTaGGAAAGAGCCAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: DPPASAGIKGVYLYHWPATFLKR*ERARSG
Trigger: TCCAGACCTGGCTCTTTCCCACCTTTTTAAGAAAGT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTATCCACATATAAGATaGAGTCAGTTGGAACAATTG +
Preference number: 2 (lower is better)
Translates to: DPPASAGIKGVYLYHWPAYPHIR*SQLEQL
Trigger: CAATTGTTCCAACTGACTCCATCTTATATGTGGATA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR GCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAAGGCTTTATAATTCCTaGTTTGATGGAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIRLYNS*FDGEGS
Trigger: GCTTCCTTCTCCATCAAAGCAGGAATTATAAAGCCT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR TCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGAGGCCAAGGGTCACATaGCTAAAGAACAATAAAGCT +
Preference number: 2 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLRPRVT*LKNNKA
Trigger: AGCTTTATTGTTCTTTAGTCATGTGACCCTTGGCCT...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR GCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGTTTTACACATGCCACTaGGTTGATAGAGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLFYTCH*VDREAL
Trigger: AAGTGCCTCTCTATCAACGCAGTGGCATGTGTAAAA...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR CCA 90 bp CGAGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATGGATATTTGCTGTGACACTCAGGATTaGAAAGGTCCCCTACATAGG +
Preference number: 2 (lower is better)
Translates to: RVKESKSPFIPKYTMDICCDTQD*KGPLHR
Trigger: CCTATGTAGGGGACCTTTCCAATCCTGAGTGTCACA...GCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
3UTR-3UTR CCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGGTCAGGCCTTAGAGTaGAGACAGAAAGTTTGTATA +
Preference number: 2 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKGQALE*RQKVCI
Trigger: TATACAAACTTTCTGTCTCCACTCTAAGGCCTGACC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CAA 90 bp GAGGATTCAGGAGTAATGGGATATCCACATATAAGATGGAGTCAGTaGGAACAATTGTTTGAAACTACCCTGAAACAGGTAAAATACTTT +
Preference number: 2 (lower is better)
Translates to: EDSGVMGYPHIRWSQ*EQLFETTLKQVKYF
Trigger: AAAGTATTTTACCTGTTTCAGGGTAGTTTCAAACAATTGTTCCAACTGACTCCATCTTATATGTGGATATCCCATTACTCCTGAATCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR CAA 90 bp CTGCCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTG +
Preference number: 3 (lower is better)
Translates to: LPNILGHGRSNSAQLGLFSSLLL*SLLFMV
Trigger: CACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCT...GAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
3UTR GCA 72 bp TTTCTTAAAAAGGTGGGAAAGAGCCAGGTCTGGAGGTaGATGCATTTGATCTCAGTAGTGGAGGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: FLKKVGKSQVWR*MHLISVVEGQR
Trigger: CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTTTCCCACCTTTTTAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CCA 72 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTaGGCAAGGGAAAGCGGCCATGGTGGGATACATAAG +
Preference number: 3 (lower is better)
Translates to: SKTSSSGYQSQA*ARESGHGGIHK
Trigger: CTTATGTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR GCA 72 bp TTGAATTGTACCACCTTCTCCACATTGCTCCAGAACTaGCTAACATCCTTGGCCATGGTAGAAGCAATTCGG +
Preference number: 3 (lower is better)
Translates to: LNCTTFSTLLQN*LTSLAMVEAIR
Trigger: CCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
3UTR TCA 72 bp TTTGTTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTaGTGTCCTGAAACTCATGCTGTAGACCAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: FVLQNRFSLCSS*CPETHAVDQAG
Trigger: GCCAGCCTGGTCTACAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CCA 72 bp AAATACTTTCTTAAAAAGGTGGGAAAGAGCCAGGTCTaGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: KYFLKKVGKSQV*RCMHLISVVEG
Trigger: CCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTTTCCCACCTTTTTAAGAAAGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR-3UTR CAA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGCTAAAACCATACAGTaGAGGATGAGCTTGAATTTT +
Preference number: 3 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTAKTIQ*RMSLNF
Trigger: AAAATTCAAGCTCATCCTCAACTGTATGGTTTTAGC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CCA 72 bp AAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATaGATATTTGCCGCTAAAACAGACTGCTGGGCACTG +
Preference number: 3 (lower is better)
Translates to: KSQRVLSSPNIQ*IFAAKTDCWAL
Trigger: CAGTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
3UTR TCA 72 bp TGCATTTTAAGTCCTGGACTTGAACATCTCCAGATTTaGTGCCCACAAGGAGTCCTAAAACAATCACACAAG +
Preference number: 3 (lower is better)
Translates to: CILSPGLEHLQI*CPQGVLKQSHK
Trigger: CTTGTGTGATTGTTTTAGGACTCCTTGTGGGCATCAAATCTGGAGATGTTCAAGTCCAGGACTTAAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
3UTR GCA 72 bp TCTTTTACCTTCATACCTCACAAATATGGACCACTATaGTCAGTTGATAGAGTAATGCAGCTTGATCTCACT +
Preference number: 3 (lower is better)
Translates to: SFTFIPHKYGPL*SVDRVMQLDLT
Trigger: AGTGAGATCAAGCTGCATTACTCTATCAACTGAGCATAGTGGTCCATATTTGTGAGGTATGAAGGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGTCGGGGCCACGGCCTaGACGAGGGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYVGATA*TRATWA
Trigger: TGCCCATGTGGCCCTCGTCCAGGCCGTGGCCCCGAC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGTGGAGGGGGACGGACTaGGACAGGGCCAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQWRGTD*DRAKGR
Trigger: CCTCCCCTTGGCCCTGTCCCAGTCCGTCCCCCTCCA...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCCTTCACTTTCTGCCTaGCCCAGGGGTTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYPSLSA*PRGWRC
Trigger: GCAGCGCCAACCCCTGGGCCAGGCAGAAAGTGAAGG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGGACCAAGAGCAGGCTaGGCTGAGACCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQGPRAG*AETSGP
Trigger: AGGCCCCGAGGTCTCAGCCCAGCCTGCTCTTGGTCC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACTCAGGCGAAGGACTGTaGACCAGCTTGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSGEGL*TSLRRG
Trigger: GCCCCTCCTCAAGCTGGTCCACAGTCCTTCGCCTGA...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGAGGACCAATGGGGCTaGCAACAGGTTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYEDQWG*QQVGAR
Trigger: CCTTGCCCCAACCTGTTGCCAGCCCCATTGGTCCTC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAAGCACTTTGGGACCTaGGAGCTGTCCTGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYKHFGT*ELSCPA
Trigger: GGCCGGACAGGACAGCTCCCAGGTCCCAAAGTGCTT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCCTCTTCTCCCACTTCTaGCCCCTGTTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QFGAAWPVPLSELAPPFVLFSHF*PLLTRS
Trigger: TGACCTGGTCAACAGGGGTCAGAAGTGGGAGAAGAG...GACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGGGAGGAGCCAGCTTTaGTGGAGGCCGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSGRSQL*WRPVAG
Trigger: ACCAGCCACCGGCCTCCAGCAAAGCTGGCTCCTCCC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCAATTCGGCGCAGCTTaGCCTGTTCCTCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYQFGAA*PVPLSE
Trigger: CTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGCCAAGGGGAGGCCGTaGGCTGTTCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSAKGRP*AVHHHH
Trigger: GTGGTGGTGGTGAACAGCCCACGGCCTCCCCTTGGC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGCAGAGAGGAAGAGATaGTCATGGGAGCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYAERKR*SWEQLR
Trigger: CCGGAGCTGCTCCCATGACCATCTCTTCCTCTCTGC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAGGCCCGGGGCGATTaGCCTCCTCTCCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGQARGD*PPLPHQ
Trigger: CTGGTGAGGGAGAGGAGGCCAATCGCCCCGGGCCTG...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGTGACAGGGTTGGTGTaGGAGGCCGTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFVTGLV*EAVRSH
Trigger: GTGGGACCTCACGGCCTCCCACACCAACCCTGTCAC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCTGGGCTCAGCCGAACTaGGGCAGGTGGGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGWAQPN*GRWGWL
Trigger: AAGCCAGCCCCACCTGCCCCAGTTCGGCTGAGCCCA...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp AGCAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTTCCATCTGCGTTCCTaGGCAAAGTCAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SNSAQLGLFLSPSSLLLLFHLRS*AKSAES
Trigger: GCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAA...CAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAAGGACTGGATGCTGCTaGGGAAGAACCAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGRTGCC*GRTKAR
Trigger: CCTTGCCTTGGTTCTTCCTCAGCAGCATCCAGTCCT...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGACTGTGGACCAGCTTaGGGAGGGGCCTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSDCGPA*GGASPE
Trigger: CTCTGGTGAGGCCCCTCCTCAAGCTGGTCCACAGTC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTCAGCGATCCTGGGCCTaGGCATCCATGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFQRSWA*ASMVGF
Trigger: GAATCCCACCATGGATGCTCAGGCCCAGGATCGCTG...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGTGTGGTTTGCTCCTTaGGTTTCTGCCCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYVWFAP*VSARAP
Trigger: TGGAGCTCGGGCAGAAACTCAAGGAGCAAACCACAC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGACGGGCCAGGCGGGTaGGAGGACGGCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRDGPGG*EDGFHP
Trigger: AGGATGGAAGCCGTCCTCTCACCCGCCTGGCCCGTC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGGGTGGGAGGTCCACTaGCCCCATCAACCTCACTCC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKGWEVH*PHQPHS
Trigger: GGAGTGAGGTTGATGGGGGCAGTGGACCTCCCACCC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGATTGCTGCCTGTCATaGCGTCCGACACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYDCCLS*RPTPSV
Trigger: CACAGATGGTGTCGGACGGCATGACAGGCAGCAATC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp ACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCGGGGGAGATGCCTCCTaGCCCACTAGAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSLAMVEAIRRSLACSSLGGDAS*PTRIWR
Trigger: TCTCCAGATTCTAGTGGGGCAGGAGGCATCTCCCCC...GAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSCSGRG*PTASWR
Trigger: GCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCA...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTAGTCCCATACACGGGTaGCAGAGCCCCATGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFSPIHG*QSPMSL
Trigger: GAGGCTCATGGGGCTCTGGCACCCGTGTATGGGACT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAGCTGCTCTAGTCGCTaGTGGGGAAACAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSCSSR*WGNSTA
Trigger: GGCTGTACTGTTTCCCCAGCAGCGACTAGAGCAGCT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGAGTGGTGTCAGGGGTaGTGGGAAAGGGAGCGACTG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQEWCQG*WERERL
Trigger: CAGTCGCTCCCTTTCCCAGCACCCCTGACACCACTC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGGGTCCAAGACAGGGTaGTGGCTGGGCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFGSKTG*WLGLGD
Trigger: ATCACCAAGGCCCAGCCAGCACCCTGTCTTGGACCC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGCACCACATTCCTTTaGAGCGGGCGGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQACTTFL*SGRGCP
Trigger: GGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGATGTGGTACCATCTTGTaGGCCTGGAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGCGTIL*AWRSIQ
Trigger: CTGGATGGACCTCCAGGCCCACAAGATGGTACCACA...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp TTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATGGTGTGGTACCATCTTGTaGGCCTGGAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LACSSLRARSSFCRCSSWCGTIL*AWRSIQ
Trigger: CTGGATGGACCTCCAGGCCCACAAGATGGTACCACA...CCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR CCA 90 bp TCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAACCAGGTCAGCAGCATaGGATAAGCTGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLAMVEAIRRSLACSSLRTRSAA*DKLNPS
Trigger: GGAGGGGTTCAGCTTATCCCATGCTGCTGACCTGGT...TCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR CCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGATTTGCTGGAGGCCGGTaGCTGGTTAAGGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGFAGGR*LVKALR
Trigger: TCTCAGAGCCTTAACCAGCCACCGGCCTCCAGCAAA...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCCCACTGGAGAACTTaGAGGCAGAGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQAHWRT*RQRGYW
Trigger: CCAGTACCCCCTCTGCCTCCAAGTTCTCCAGTGGGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGTGGAGCTGGGCCCACTaGAGAACTTGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQWSWAH*RTWRQR
Trigger: CCTCTGCCTCCAAGTTCTCCAGTGGGCCCAGCTCCA...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGTGATGGTGGGTTCTTaGGAGGTCGGCCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKVMVGS*EVGPAS
Trigger: GGAAGCGGGGCCGACCTCCCAAGAACCCACCATCAC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGGTCCCCTTGGTTGGTaGTCCCAACGAGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGGPLGW*SQRACG
Trigger: CCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR CAA 72 bp ACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTaGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TSLAMVEAIRRS*ACSSLRARSSF
Trigger: AAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp AACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCTCTACTTCTGACCCCTGTTaGCCAGGTCAGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: NILGHGRSNSAQLGLFLSTSDPC*PGQQHG
Trigger: CCCATGCTGCTGACCTGGTCAACAGGGGTCAGAAGT...AGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGACTTCTGACCCCTGTTaGCCAGGTCAGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQTSDPC*PGQQHG
Trigger: CCCATGCTGCTGACCTGGTCAACAGGGGTCAGAAGT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCAGTTTGCCCTACAATaGAGTCCAGGTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYQFALQ*SPGAGP
Trigger: TGGACCTGCACCTGGACTTCATTGTAGGGCAAACTG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGGCTGGCCCAGGGAGTaGGGATGGCATGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAGWPRE*GWHVQR
Trigger: TCTCTGCACATGCCATCCTCACTCCCTGGGCCAGCC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGCCTCTCAGGAGCCCTaGTTTTCTTGCTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGASQEP*FSCCAG
Trigger: ACCGGCGCAGCAAGAAAATCAGGGCTCCTGAGAGGC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCCCAACTGGAGCCCCTaGCCTTTTTCGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYPNWSP*PFSRHF
Trigger: AAAATGCCTCGAAAAAGGTCAGGGGCTCCAGTTGGG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGCCTGGTGGCACTGTaGGGGGCTTCAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGSLVAL*GASRGW
Trigger: CCAGCCTCTTGAAGCCCCTCACAGTGCCACCAGGCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCGCTGCTCTTCATGGTaGCGGATCACCATACGTACC +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRRCSSW*RITIRT
Trigger: GGTACGTATGGTGATCCGGCACCATGAAGAGCAGCG...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAGCCCCTGCATATTGCTaGAGTAGCTCCTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGAPAYC*SSSSID
Trigger: GTCTATGGAGGAGCTACTGCAGCAATATGCAGGGGC...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFASWRT*APVKVS
Trigger: ACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRCPTAS*RTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCCCCTCCACAGGACCTaGCACCTCCTGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWPLHRT*HLLLLT
Trigger: GGTCAGCAGCAGGAGGTGCCAGGTCCTGTGGAGGGG...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACTCCTTCTCCATTCTCTaGGCTTCCCCCAGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSFSIL*ASPSSR
Trigger: ACGACTACTGGGGGAAGCCCAGAGAATGGAGAAGGA...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGACAGGGTGCTGGCTaGGCCTTGGTGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKRQGAG*ALVMVG
Trigger: ACCCACCATCACCAAGGCCCAGCCAGCACCCTGTCT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGCTGGTCCCCTTGGTTaGTGGTCCCAACGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAAGPLG*WSQRAC
Trigger: GCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTCTACGCAGGATACGCTaGTCCCCTTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFLRRIR*SPWLVV
Trigger: GACCACCAACCAAGGGGACCAGCGTATCCTGCGTAG...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGACCTGGAGGTGGAGCTaGGCTCAGCCGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWTWRWS*AQPNWG
Trigger: GCCCCAGTTCGGCTGAGCCCAGCTCCACCTCCAGGT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATGGTGCCTGGAGGTCCATCCAGTaGGGAATCTTGAGCTATATG +
Preference number: 4 (lower is better)
Translates to: PVPLSELAPPFVAALHGAWRSIQ*GILSYM
Trigger: CATATAGCTCAAGATTCCTCACTGGATGGACCTCCA...GGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAGCTTGTTACATTGTGTaGCAGCGGAAGATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGACYIV*QRKMEG
Trigger: ACCCTCCATCTTCCGCTGTCACACAATGTAACAAGC...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGCGGCACCAGATGCTaGAACAAGGGAAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKSGTRC*NKGRRL
Trigger: CAGGCGTCTTCCCTTGTTTCAGCATCTGGTGCCGCT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGGCACCTCCTGCTGCTaGCCATTGGGGATGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGGTSCC*PLGMLS
Trigger: TGAGAGCATCCCCAATGGTCAGCAGCAGGAGGTGCC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTGGGGCTGGCTTCAGTaGCAGGGTTGGTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRWGWLQ*QGWCGR
Trigger: CCTCCCACACCAACCCTGTCACTGAAGCCAGCCCCA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYHLVSI*VPEQSQ
Trigger: CTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp ATTGCTCCAGAACTGCCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCAGGAGACACAGGATTaGTGCCTGTCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: IAPELPNILGHGRSNSAQQETQD*CLSCRP
Trigger: CGGACGGCATGACAGGCAGCAATCCTGTGTCTCCTG...CTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCACTGTACGGCCTTCTTaGTTGGGCACTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGTVRPS*LGTGCS
Trigger: GCTGCAGCCAGTGCCCAAGCAAGAAGGCCGTACAGT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTCCTCCAGAGGAACTGTaGTACCATCTTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPAPPEEL*YHLVGL
Trigger: CAGGCCCACAAGATGGTACCACAGTTCCTCTGGAGG...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACTCAATCTCACGCCTCTaGGTCTCTGCATCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSISRL*VSASLP
Trigger: AGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGA...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTCTCAGTTCCATGGCATaGTCCACCTCCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPALSSMA*STSPSN
Trigger: GTTGGAAGGGGAGGTGGACCATGCCATGGAACTGAG...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCTCTAACAGTATGCGGTaGGAAAGACGGTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGSNSMR*ERRWRG
Trigger: GCCCCGCCACCGTCTTTCCCACCGCATACTGTTAGA...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCAGCCGACACCATGAGTaGTGCTGGCAACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGSRHHE*CWQHWR
Trigger: CCTCCAGTGTTGCCAGCACCACTCATGGTGTCGGCT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGAGAACAGGTCCAGGTaGCCGAGATGCAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFENRSR*PRCRNN
Trigger: GTTGTTCCTGCATCTCGGCCACCTGGACCTGTTCTC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCCCAGCACTAGTCACTaGACGTTGTGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQPSTSH*TLCQGS
Trigger: GCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACTGCTGGTGCCAATGGTaGAACAGGAGTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYCWCQW*NRSQSI
Trigger: GATGGATTGACTCCTGTTCCACCATTGGCACCAGCA...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCAGGAAGAGATGGTCATaGGAGCAGCTCCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGRKRWS*EQLRVL
Trigger: CAGCACCCGGAGCTGCTCCCATGACCATCTCTTCCT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCAGATAAATCCAGAGTaGGCACAGGAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYQINPE*AQELEQ
Trigger: CTGCTCCAGTTCCTGTGCCCACTCTGGATTTATCTG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACTTTCCTGTTCAGCCCTaGACATCTCCTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYFPVQP*TSPHPQ
Trigger: CTGAGGATGAGGAGATGTCCAGGGCTGAACAGGAAA...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTACCTCCTCCTTGGCTTaGTCCAGGTCTTTTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFTSSLA*SRSFRA
Trigger: TGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCCTGCTGCTGACCATTaGGGATGCTCTCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQPAADH*GCSQLP
Trigger: TGGAAGCTGAGAGCATCCCCAATGGTCAGCAGCAGG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGAGATCTGTTCTTCTTaGGAGGCCTCCCCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKEICSS*EASPSD
Trigger: GTCGGAGGGGGAGGCCTCCCAAGAAGAACAGATCTC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTTTCAGGGCCGGGGACTaGGTCAACCCCATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFFRAGD*VNPIGF
Trigger: AAAACCAATGGGGTTGACCCAGTCCCCGGCCCTGAA...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCATACGCTGGTCCCCTTaGTTGGTGGTCCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGIRWSP*LVVPTS
Trigger: GCTCGTTGGGACCACCAACCAAGGGGACCAGCGTAT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR CAA 72 bp AAGGTGGGAAAGAGCCAGGTCTGGAGGTGCATGCATTaGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KVGKSQVWRCMH*ISVVEGQRQGN
Trigger: ATTTCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTTTCCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CAA 72 bp ACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTaGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TFSTLLQNCLTS*AMVEAIRRSLA
Trigger: GGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCTGAGACAGAAGGTCTaGGTACTTCTCAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRLRQKV*VLLSLP
Trigger: GGGCAAACTGAGAAGTACTCAGACCTTCTGTCTCAG...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCAGGACTGGATGCTGCTaGGGAAGAACCAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGRTGCC*GRTKAR
Trigger: CCTTGCCTTGGTTCTTCCTCAGCAGCATCCAGTCCT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGATCTTCCTCTTGGGGTTaGAAGTCCCCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGSSSWG*KSPSSS
Trigger: TGATGAAGATGGGGACTTTCAACCCCAAGAGGAAGA...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCATCTTCACTATCCCCTaGGGCTGGAGCAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGIFTIP*GWSRGI
Trigger: GATGCCTCTGCTCCAGCCTCAGGGGATAGTGAAGAT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGCTTGGCTCTGGGACTaGGCATCCTCCGACTCATCA +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGAWLWD*ASSDSS
Trigger: TGATGAGTCGGAGGATGCTCAGTCCCAGAGCCAAGC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCTGGATTTGGAAGGTaGGAGGTTTGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSPGFGR*EVCFPQ
Trigger: CTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGG...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAGGATTGCTGTCTGTaGAGCCGCCATAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGQDCCL*SRHRSQ
Trigger: CTGGCTCCTATGGCGGCTTCACAGACAGCAATCCTG...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGTTCTTCTGCCTGTTTaGGCTCCTCTCGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQVLLPV*APLGSL
Trigger: AAGTGAGCCGAGAGGAGCTCAAACAGGCAGAAGAAC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCAGACCCCTGACCCCTaGTTTCTACATCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSQTPDP*FLHQHW
Trigger: CCAGTGCTGATGTAGAAATCAGGGGTCAGGGGTCTG...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCGCTTCATGTTTGGCTTaGTCTGCAATTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: HGRSNSAQLGLFLSPSSLASCLA*SAISAW
Trigger: CCATGCAGAAATTGCAGAGCAAGCCAAACATGAAGC...GAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAGGGTGGGAGGTCCACTaGCCCCATCAACCTCACTCC +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIGWEVH*PHQPHS
Trigger: GGAGTGAGGTTGATGGGGGCAGTGGACCTCCCACCC...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGGCCGAGGTGCTGGTaGCAATGGTGGAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGRPRCW*QWWNRS
Trigger: ACTCCTGTTCCACCATTGGCACCAGCACCTCGGCCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGACTGCCTTCACTTTCTaGCTGGCCCAGGGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARTAFTF*LAQGLA
Trigger: CGCCAACCCCTGGGCCAGGCAGAAAGTGAAGGCAGT...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTTGTGGTACCATCTTGTaGGCCTGGAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSCGTIL*AWRSIQ
Trigger: CTGGATGGACCTCCAGGCCCACAAGATGGTACCACA...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGTGCTGGGGTCACACTaGTCAACAGAGCTGGACCTA +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGVLGSH*STELDL
Trigger: TAGGTCCAGCTCTGTTGACCAGTGTGACCCCAGCAC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGAGGCAGAGGGGGTACTaGAGCCAGAGACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQRQRGY*SQRQCL
Trigger: CAAACATTGTCTCTGGCTCCAGTACCCCCTCTGCCT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGTGTGACCTGGAGCTaGGCCCACTGGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQACVTWS*AHWRTW
Trigger: CCAAGTTCTCCAGTGGGCCCAGCTCCAGGTCACACA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGTGGGCACAGGAACTaGAGCAGGGCTCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKSGHRN*SRAQGK
Trigger: CTTACCTTGAGCCCTGCTCCAGTTCCTGTGCCCACT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGAAAGGGGAACGAGGTaGTGGCGGGGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSERGTR*WRGLAS
Trigger: CGACGCCAACCCCCGCCACCACCTCGTTCCCCTTTC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGAGAACGAGGACCAATaGGGCTGGCAACAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGENEDQ*GWQQVG
Trigger: CCCAACCTGTTGCCAGCCCCATTGGTCCTCGTTCTC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTCCTGAGCATCCATGGTaGGATTCCAGTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFPEHPW*DSSRCH
Trigger: ATGACAGCGACTGGAATCCCACCATGGATGCTCAGG...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCCACTTGTTCAGCTTTaGCCTGAGTGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGPLVQL*PEWLHG
Trigger: TCCGTGCAGCCACTCAGGCCAAAGCTGAACAAGTGG...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAAGCTGAAGCAGAGGTaGAGTAGGCAAGATATGGAC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYKLKQR*SRQDMD
Trigger: GTCCATATCTTGCCTACTCCACCTCTGCTTCAGCTT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGTAAGGGGGTACAAGTaGGTAGAGGGGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGVRGYK*VEGYRQ
Trigger: CTGCCTGTACCCCTCTACCCACTTGTACCCCCTTAC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGCTTTCGAAGCACTTTaGGACCTGGGAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKAFEAL*DLGAVL
Trigger: CAGGACAGCTCCCAGGTCCCAAAGTGCTTCGAAAGC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCTTCTGGTCTGTGAACTaGTTGGGGTCCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGFWSVN*LGSRRL
Trigger: CAGCCTCCTGGACCCCAACCAGTTCACAGACCAGAA...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGTGTCAGGGGTGCTaGGAAAGGGAGCGACTGTGT +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAWCQGC*ERERLC
Trigger: ACACAGTCGCTCCCTTTCCCAGCACCCCTGACACCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR CAA 72 bp CCCATTTCCATGACAACCAGTAACCTACCCCCTACTTaGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PISMTTSNLPPT*VERKTAPYVSL
Trigger: CAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTGTCATGGAAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGTGGAGGTCCATCCAGTaGGGAATCTTGAGCTATATG +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRWRSIQ*GILSYM
Trigger: CATATAGCTCAAGATTCCTCACTGGATGGACCTCCA...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCACTTCTGACCCCTGTTaGCCAGGTCAGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTTSDPC*PGQQHG
Trigger: CCCATGCTGCTGACCTGGTCAACAGGGGTCAGAAGT...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CTCAGGATTGGAAAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGACTTCTGACCCCTGTTaGCCAGGTCAGCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: LRIGKVPYIGTCHKELELTSDPC*PGQQHG
Trigger: CCCATGCTGCTGACCTGGTCAACAGGGGTCAGAAGT...CAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTTTCCAATCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCTCTTCTCCCACTTCTaGCCCCTGTTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQALFSHF*PLLTRS
Trigger: TGACCTGGTCAACAGGGGTCAGAAGTGGGAGAAGAG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGGCCGAGACTGTTGTTTaGATTGTACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRAETVV*IVPPSP
Trigger: TGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGC...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCTTGTTACATTGTGTaGCAGCGGAAGATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQACYIV*QRKMEG
Trigger: ACCCTCCATCTTCCGCTGTCACACAATGTAACAAGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTCCTTGAATTCTCGGTaGGACTGGAAGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASLNSR*DWKTCG
Trigger: GCCACATGTCTTCCAGTCTCACCGAGAATTCAAGGA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGTCCTTGAATTCTCGGTaGGACTGGAAGACATGTGGC +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQSLNSR*DWKTCG
Trigger: GCCACATGTCTTCCAGTCTCACCGAGAATTCAAGGA...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCAAGGGGGCTGTaGTGGGGATGGGTAATGGGG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSQARGL*WGWVMG
Trigger: CCCCATTACCCATCCCCATCACAGCCCCCTTGCCTG...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGTGGAGAAACCCCAGCTaGTGCCAAAGGTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGWRNPS*CQRWSR
Trigger: TCTGGACCACCTTTGGCATCAGCTGGGGTTTCTCCA...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGCTGGGGCCACAGCTaGGTTCAATCCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQACWGHS*VQSWNM
Trigger: CATGTTCCAGGATTGAACTCAGCTGTGGCCCCAGCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTGTTCAGCTTTGGCCTaGGTGGCTGCACGGATATCT +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKCSALA*VAARIS
Trigger: AGATATCCGTGCAGCCACTCAGGCCAAAGCTGAACA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTAAGGTGTTGCAGGTATaGTGGGAGGATGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFKVLQV*WEDVTG
Trigger: TCCTGTCACATCCTCCCATCATACCTGCAACACCTT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGAACTAGGAGGAAGCTaGAGCAGAGGTGGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAELGGS*SRGGVG
Trigger: GCCTACTCCACCTCTGCTTCAGCTTCCTCCTAGTTC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGTCCGGCCAGACCCCTaGCCCCTGATTTCTACATCA +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRVRPDP*PLISTS
Trigger: TGATGTAGAAATCAGGGGTCAGGGGTCTGGCCGGAC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCTTCGGTGGGGATGTTaGAATGGTGACAGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQLRWGC*NGDSSD
Trigger: GTCACTACTGTCACCATTTCAACATCCCCACCGAAG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCTGATGAGGTGGTGCTaGCCCCCTGCTGACACCAGG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSLMRWC*PPADTR
Trigger: CCTGGTGTCAGCAGGGGGTCAGCACCACCTCATCAG...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGGGAGATGCCTGTCATaGCGTCCGACACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTGRCLS*RPTPSV
Trigger: CACAGATGGTGTCGGACGGCATGACAGGCATCTCCC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTCACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPAHLVSI*VPEQSQ
Trigger: CTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTG...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp GCTCCAGAACTGCCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCTTCACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: APELPNILGHGRSNSAQLHLVSI*VPEQSQ
Trigger: CTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTG...AAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCGCTGCTCTTCATGGTaGCGGATCACCATACGTACC +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQARCSSW*RITIRT
Trigger: GGTACGTATGGTGATCCGGCACCATGAAGAGCAGCG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAACAATGAAGTCCAGGTaGAGGTCCAAGGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGTMKSR*RSKAFL
Trigger: TAAGAAAGCCTTGGACCTGCACCTGGACTTCATTGT...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGGGGAGGAGCCAGCTTTaGTGGAGGCCGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLGRSQL*WRPVAG
Trigger: ACCAGCCACCGGCCTCCAGCAAAGCTGGCTCCTCCC...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTACCTCCCCTTCCAACTaGTCTTCAGCTGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPATSPSN*SSAAIV
Trigger: CACTATAGCAGCTGAAGAGCAGTTGGAAGGGGAGGT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAACTGTCTTCTTGAGCTaGCTCTTCAACTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGTVFLS*LFNCFL
Trigger: GAGGAAACAGTTGAAGAGGCAGCTCAAGAAGACAGT...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTTGGCCATGGTGATTGCTGCCTGTCATaGCGTCCGACACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LYHLLHIAPELPNILGHGDCCLS*RPTPSV
Trigger: CACAGATGGTGTCGGACGGCATGACAGGCAGCAATC...ACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp TTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTTGGCCATGGTGAGACACAGGATTGCTaGCTGTCATGCCGTCCGACA +
Preference number: 4 (lower is better)
Translates to: LYHLLHIAPELPNILGHGETQDC*LSCRPT
Trigger: TGTCGGACGGCATGACAGGCAGCAATCCTGTGTCTC...ACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCAGGAGACACAGGATTaGTGCCTGTCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWQETQD*CLSCRP
Trigger: CGGACGGCATGACAGGCAGCAATCCTGTGTCTCCTG...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGATGTAGAAGGTGCTaGAGCCAGAAGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKRCRRC*SQKGSL
Trigger: CAGGCTTCCCTTCTGGCTGCAGCACCTTCTACATCT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGGCGCTCAGATCGCTaGTGCTTCCGCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGRRSDR*CFRFSS
Trigger: GGAAGAAAAGCGGAAGCAGCAGCGATCTGAGCGCCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGTGCTCCTTGAGTTTCTaGCCGAGCTCCACGAAGACG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGCSLSF*PSSTKT
Trigger: CGTCTTCGTGGAGCTCGGGCAGAAACTCAAGGAGCA...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCAATGGGCAAATCCCTTaGTTTAGGGGGACGCCCACG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQANGQIP*FRGTPT
Trigger: CGTGGGCGTCCCCCTAAAGCAAGGGATTTGCCCATT...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGCCTCATCAGAGGAACTaGCTTCACTTTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKPHQRN*LHFLPG
Trigger: GCCAGGCAGAAAGTGAAGGCAGTTCCTCTGATGAGG...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTCCTTGGCAATTCGGCGCAGCTTaGCCTGTTCCTCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PYIGTCHKELELQRLVPWQFGAA*PVPLSE
Trigger: CTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTG...CCAAGGAACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTTTGCTGGAGGCCGGTaGCTGGTTAAGGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAFAGGR*LVKALR
Trigger: TCTCAGAGCCTTAACCAGCCACCGGCCTCCAGCAAA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTCAATCTCACGCCTCTaGGTCTCTGCATCATTGCCT +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASISRL*VSASLP
Trigger: AGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCTCAGTTCCATGGCATaGTCCACCTCCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQALSSMA*STSPSN
Trigger: GTTGGAAGGGGAGGTGGACCATGCCATGGAACTGAG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGGTCGCAGAACCTTGTaGAGGCGTTTGACTAGACCT +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGGRRTL*RRLTRP
Trigger: AGGTCTAGTCAAACGCCTCCACAAGGTTCTGCGACC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTAGGTGCTGGTGCCAATaGTGGAACAGGAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSRCWCQ*WNRSQS
Trigger: GGATTGACTCCTGTTCCACCATTGGCACCAGCACCT...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCTAAAGATAGTGTCTaGGCTGGTGTTGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQAKDSV*AGVGTR
Trigger: CCTGGTACCAACACCAGCCCAGACACTATCTTTAGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGAAAAGATGGGGTGGCTaGGGCCAGGAGAACGAGGAC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARKRWGG*GQENED
Trigger: GTCCTCGTTCTCCTGGCCCCAGCCACCCCATCTTTT...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGCTCTAGTCGCTGCTaGGGAAACAGTACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQACSSRC*GNSTAR
Trigger: TCGGGCTGTACTGTTTCCCCAGCAGCGACTAGAGCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGGGCCTGAGCATCCATaGTGGGATTCCAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARGPEHP*WDSSRC
Trigger: ACAGCGACTGGAATCCCACCATGGATGCTCAGGCCC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCAGCTTTGGCCTGAGTaGCTGCACGGATATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQQLWPE*LHGYLL
Trigger: AAGAAGATATCCGTGCAGCCACTCAGGCCAAAGCTG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTTCCTCTTCCTCGTaGGGTAGTCGGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRPSSSS*GSRNTS
Trigger: GGAGGTGTTCCGACTACCCCACGAGGAAGAGGAAGG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGACGTTTCACAGCAGGTaGAGTGATGGCAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQTFHSR*SDGKLC
Trigger: ACAGAGCTTGCCATCACTCCACCTGCTGTGAAACGT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGTCCAAGACAGGGTGCTaGCTGGGCCTTGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWSKTGC*LGLGDG
Trigger: ACCATCACCAAGGCCCAGCCAGCACCCTGTCTTGGA...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGCCGAGACTGTTGTTTaGATTGTACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFAETVV*IVPPSP
Trigger: TGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCGCTGGTCGGAACAATaGTTAAATGGGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQARWSEQ*LNGDPS
Trigger: ACTGGGGTCCCCATTTAATCATTGTTCCGACCAGCG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCCAGCTTGTAAGACGTaGTACACACATGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRPACKT*YTHGKH
Trigger: ATGCTTTCCATGTGTGTATCACGTCTTACAAGCTGG...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCATTCGCTGGAGAGGATaGACTTCAGTGGCCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGIRWRG*TSVALR
Trigger: TCTAAGGGCCACTGAAGTTCATCCTCTCCAGCGAAT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTAGGGGAGAGGAATTGTaGATTGTCATCGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFRGEEL*IVIGEE
Trigger: CTCTTCTCCGATGACAATTCACAATTCCTCTCCCCT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGTTGACACCAGAGTTTaGGTTGATGAGGGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKVDTRV*VDEGAN
Trigger: GTTGGCTCCCTCATCAACTCAAACTCTGGTGTCAAC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGAACAGAAGACACAGATaGGCCAGGTGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWNRRHR*ARWLLQ
Trigger: CTGGAGGAGCCACCTGGCTCATCTGTGTCTTCTGTT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGTGCTGACCCCCTGCTaGCACCAGGTGCACCACATT +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSVLTPC*HQVHHI
Trigger: AATGTGGTGCACCTGGTGTCAGCAGGGGGTCAGCAC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTACATTGCTCCAGAACTaGCTAACATCCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPATLLQN*LTSLAM
Trigger: CATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGGAGTACTTCTCAGTTTaGCCTACAATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQREYFSV*PTMKSR
Trigger: CCTGGACTTCATTGTAGGGCAAACTGAGAAGTACTC...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGTCTGGATGCCAACGCTaGTTGTTACATTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRSGCQR*LLHCVT
Trigger: TGTCACACAATGTAACAAGCAGCGTTGGCATCCAGA...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTCCATGAGGCTATTCTaGAAGGGAGTTCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKSMRLF*KGVPVR
Trigger: CCTGACAGGAACTCCCTTGCAGAATAGCCTCATGGA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAGACACAGGATTGCTaGCTGTCATGCCGTCCGACA +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARETQDC*LSCRPT
Trigger: TGTCGGACGGCATGACAGGCAGCAATCCTGTGTCTC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp AAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTGGGGGAGATGCCTCCTaGCCCACTAGAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KVPYIGTCHKELELQRLVGGDAS*PTRIWR
Trigger: TCTCCAGATTCTAGTGGGGCAGGAGGCATCTCCCCC...AACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAGCACAGCCAATGTCTaGAACTTTCCACAATCATAC +
Preference number: 4 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSTANV*NFPQSY
Trigger: GTATGATTGTGGAAAGTTGCAGACATTGGCTGTGCT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCCCTCTCCCAGCATCTaGTGGAGATCTGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGPSPSI*WRSVLL
Trigger: AAGAAGAACAGATCTCCAGCAGATGCTGGGAGAGGG...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGCCTGCTGACACCAGGTaGACCACATTCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARPADTR*TTFLCS
Trigger: GCTGCAAAGGAATGTGGTGCACCTGGTGTCAGCAGG...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGACCAGGTCAGCAGCATaGGATAAGCTGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRTRSAA*DKLNPS
Trigger: GGAGGGGTTCAGCTTATCCCATGCTGCTGACCTGGT...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGTCGCTGCTCTTCATaGTGCCGGATCACCATACGT +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQACRCSS*CRITIR
Trigger: ACGTATGGTGATCCGGCACCATGAAGAGCAGCGACA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAGTTCTTCAACCTCAATaGTCTCCTCATCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGVLQPQ*SPHHLP
Trigger: AGGAAGATGATGAGGAGACCATTGAGGTTGAAGAAC...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAGCAAGGAGATGGTCTaGATTGTCTTTCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASKEMV*IVFPSP
Trigger: GGGACTAGGAAAGACAATCCAGACCATCTCCTTGCT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGAGCAAGGAGATGGTCTaGATTGTCTTTCCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQSKEMV*IVFPSP
Trigger: GGGACTAGGAAAGACAATCCAGACCATCTCCTTGCT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAATGACACTCATAAAATaGCCTGTAGCTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGMTLIK*PVASVS
Trigger: GGAGACACTAGCTACAGGCCATTTTATGAGTGTCAT...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGACCTTCATCTTGACTaGCTTGGGACGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRDLHLD*LGTRWR
Trigger: CCTCCACCTCGTCCCAAGCCAGTCAAGATGAAGGTC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTACGGCCTTCTTGCTTaGGCACTGGCTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARYGLLA*ALAAAF
Trigger: GAATGCTGCAGCCAGTGCCCAAGCAAGAAGGCCGTA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTTCTCAGGCTCATCCTTaGGAACAGGTAGCCGGTTTA +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSSQAHP*EQVAGL
Trigger: TAAACCGGCTACCTGTTCCCAAGGATGAGCCTGAGA...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGGCTGGCAACAGGTTaGGGCAAGGTACAGAAATCC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWGLATG*GKVQKS
Trigger: GGATTTCTGTACCTTGCCCCAACCTGTTGCCAGCCC...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTGTAAGTCCAAAAGATaGGGTGGCTGGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRCKSKR*GGWGQE
Trigger: CTCCTGGCCCCAGCCACCCCATCTTTTGGACTTACA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTAAAATGAGCACCCGGTaGCCCTCCGCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSKMSTR*PSALSC
Trigger: GCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTT...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGATTTGGGGCTGAAATaGGTATTGGAGCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQDLGLK*VLELWL
Trigger: TAGCCACAGCTCCAATACCCATTTCAGCCCCAAATC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGATGGATGGTGGCACCTaGTTAGCAGCAAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWMDGGT*LAASGR
Trigger: CCTTCCGCTTGCTGCTAACCAGGTGCCACCATCCAT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGTTCACCATGGATGGTaGCACCTGGTTAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGVHHGW*HLVSSK
Trigger: CTTGCTGCTAACCAGGTGCCACCATCCATGGTGAAC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTGGAGGTCCATCCAGTaGGGAATCTTGAGCTATATG +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKWRSIQ*GILSYM
Trigger: CATATAGCTCAAGATTCCTCACTGGATGGACCTCCA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCAGGATTGGAAAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGTTCCATCTGCGTTCCTaGGCAAAGTCAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRIGKVPYIGTCHKELELFHLRS*AKSAES
Trigger: GCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAA...CAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTTTCCAATCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR TCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCCAGTTTGCCCTACAATaGAGTCCAGGTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTQFALQ*SPGAGP
Trigger: TGGACCTGCACCTGGACTTCATTGTAGGGCAAACTG...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGGCTGGTTAAGGCTCTaGGACAGAAGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTGWLRL*DRRSEY
Trigger: GTACTCAGACCTTCTGTCTCAGAGCCTTAACCAGCC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGCTGGTTAAGGCTCTaGGACAGAAGGTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWGWLRL*DRRSEY
Trigger: GTACTCAGACCTTCTGTCTCAGAGCCTTAACCAGCC...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAATCTTCACTATCCCCTaGGGCTGGAGCAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIIFTIP*GWSRGI
Trigger: GATGCCTCTGCTCCAGCCTCAGGGGATAGTGAAGAT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGCTGCTACTGTCTTCTTaGGCTGCCTCTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKLLLSS*AASSTV
Trigger: AACAGTTGAAGAGGCAGCTCAAGAAGACAGTAGCAG...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTTCTCACAGGCCAAGTaGGCAAGCAAGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRFSQAK*ASKEMV
Trigger: GACCATCTCCTTGCTTGCTCACTTGGCCTGTGAGAA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCCAGCTTGTAAGACGTaGTACACACATGGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQPACKT*YTHGKH
Trigger: ATGCTTTCCATGTGTGTATCACGTCTTACAAGCTGG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGAGGTGGCTAAAGCCTaGGATGTAGAAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVREVAKA*DVEGAA
Trigger: TGCAGCACCTTCTACATCTCAGGCTTTAGCCACCTC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTGCGTTTGTCCGCATTaGACCGTTCCATCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARCVCPH*TVPSRP
Trigger: AGGCCTTGATGGAACGGTTCAATGCGGACAAACGCA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCACGAAGACGTTCACTaGCACGAGTCCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSHEDVH*HESPAS
Trigger: AGAGGCTGGGGACTCGTGTCAGTGAACGTCTTCGTG...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTGTGACGACAAGCTATaGAGGTGGATTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARCDDKL*RWIGLG
Trigger: CCCCAACCCAATCCACCTTCATAGCTTGTCGTCACA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGAACAAATTGGGGCCTaGGGTCAGGTTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVREQIGA*GQVLQQ
Trigger: CTGTTGCAGAACCTGACCTCAGGCCCCAATTTGTTC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTTGCTCTGCAATTTCTaGATGGCTCTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPALLCNF*MALLPL
Trigger: AAGTGGGAGAAGAGCCATGCAGAAATTGCAGAGCAA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTACATTGCTCCAGAACTaGCTAACATCCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSTLLQN*LTSLAM
Trigger: CATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGT...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTACAATGAAGTCCAGGTaGAGGTCCAAGGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFTMKSR*RSKAFL
Trigger: TAAGAAAGCCTTGGACCTGCACCTGGACTTCATTGT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGACGCCTCTGGGTCTCTaGATCATTGCCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWTPLGL*IIAFLL
Trigger: CAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGATACTTTTTGGGCATCTaGTTCTCAACATCCACCTTA +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGYFLGI*FSTSTL
Trigger: TAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTA...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCGGCACCGGATAACATaGTCATACTTTTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSRHRIT*SYFLGI
Trigger: GATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCG...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGGGGGAGATGCCTCCTaGCCCACTAGAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSGGDAS*PTRIWR
Trigger: TCTCCAGATTCTAGTGGGGCAGGAGGCATCTCCCCC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGGACCAGTATTTGGCTaGAAGGGAGACAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSGPVFG*KGDKRT
Trigger: TGTTCTCTTGTCTCCCTTGCAGCCAAATACTGGTCC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGAGTCACTGGACGTTGTaGCAAGGAAGCCAACTGTCC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWSHWTL*QGSQLS
Trigger: GGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCTGAGATGTAGAAGGTaGTGCAGCCAGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWLRCRR*CSQKGS
Trigger: GCTTCCCTTCTGGCTGCAGCACCTTCTACATCTCAG...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGCGCTCAGATCGCTGCTaGTTCCGCTTTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARRSDRC*FRFSSR
Trigger: TCTGGAAGAAAAGCGGAAGCAGCAGCGATCTGAGCG...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCATGATTTCTGACAGCTaGTCTAGTCGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAMISDS*SSRCWG
Trigger: TCCCCAGCAGCGACTAGAGCAGCTGTCAGAAATCAT...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGACAGGAGTGTGGTTTaGTCCTTGAGTTTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARDRSVV*SLSFCP
Trigger: CGGGCAGAAACTCAAGGAGCAAACCACACTCCTGTC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGAAGGCAAACGAGCCTaGATTTCAGGAGATAAGATG +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFEGKRA*ISGDKM
Trigger: CATCTTATCTCCTGAAATGCAGGCTCGTTTGCCTTC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCAGGATTGGAAAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGTGTCGCTGCTCTTCATaGTGCCGGATCACCATACGT +
Preference number: 4 (lower is better)
Translates to: LRIGKVPYIGTCHKELELCRCSS*CRITIR
Trigger: ACGTATGGTGATCCGGCACCATGAAGAGCAGCGACA...CAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTTTCCAATCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGATACTGGAAAAGGACTaGTCAGGGCTGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKILEKD*SGLKLT
Trigger: TGTCAGCTTCAGCCCTGACCAGTCCTTTTCCAGTAT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGCCAGTGCTAAAGTCTaGGTGGCAGATAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKASAKV*VADKSR
Trigger: TCTGGATTTATCTGCCACCCAGACTTTAGCACTGGC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGCATTCGGGTCATCTaGGTAAAAATGAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGSIRVI*VKMSTR
Trigger: CCGGGTGCTCATTTTTACCCAGATGACCCGAATGCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGACGAGGCCTAGGCACTaGCCTGGGAATTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWTRPRH*PGNSFS
Trigger: AGAGAAAGAATTCCCAGGCCAGTGCCTAGGCCTCGT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTTTCTACATCAGCACTaGTTCGACGCCGTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARFLHQH*FDAVED
Trigger: GTCCTCCACGGCGTCGAACCAGTGCTGATGTAGAAA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGTAGGGATACATAGGTaGGGAGGAGCACTACTACGC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRVGIHR*GGALLR
Trigger: GCGTAGTAGTGCTCCTCCCCACCTATGTATCCCTAC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGTGTAGAATTCGGAGCTaGCACTGCTGTAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGCRIRS*HCCSGD
Trigger: GTCACCACTACAGCAGTGCCAGCTCCGAATTCTACA...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCTGAGACAGAAGGTCTaGGTACTTCTCAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRLRQKV*VLLSLP
Trigger: GGGCAAACTGAGAAGTACTCAGACCTTCTGTCTCAG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTCCTTGTGGAGGCGTTTaGCTAGACCTTCATTATATT +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPAPCGGV*LDLHYI
Trigger: AATATAATGAAGGTCTAGTCAAACGCCTCCACAAGG...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCCATACCTGGAGAGGATaGACTTCAGTGGCCCTTAGA +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTHTWRG*TSVALR
Trigger: TCTAAGGGCCACTGAAGTTCATCCTCTCCAGGTATG...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGGTGCCAGAGCCCCATaGGCCTCACTAAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSGARAP*ASLSWK
Trigger: TTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGCCTGCTCCAAAATATaGGTTTGTTTGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAACSKI*VCLLAT
Trigger: TGTGGCCAGCAAACAAACTCATATTTTGGAGCAGGC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTTTGGAAATTGGGATCTaGACCTCTCTTGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSLEIGI*TSLVSP
Trigger: GGGAGAAACAAGAGAGGTTCAGATCCCAATTTCCAA...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCAAATCCAGGTCATCCTaGATTACGGCCATCACCATG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAKSRSS*ITAITM
Trigger: CATGGTGATGGCCGTAATTCAGGATGACCTGGATTT...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCTTGCTCTGCAATTTCTaGATGGCTCTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGLLCNF*MALLPL
Trigger: AAGTGGGAGAAGAGCCATGCAGAAATTGCAGAGCAA...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTCCTTGGCACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PYIGTCHKELELQRLVPWHLVSI*VPEQSQ
Trigger: CTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTG...CCAAGGAACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp CCACAAGGAGTCCTAAAACAATCACACAAGCACAATGAGGGAGGTGAGAGAATTCGCTGCTCTTCATGGTaGCGGATCACCATACGTACC +
Preference number: 4 (lower is better)
Translates to: PQGVLKQSHKHNEGGERIRCSSW*RITIRT
Trigger: GGTACGTATGGTGATCCGGCACCATGAAGAGCAGCG...AATTCTCTCACCTCCCTCATTGTGCTTGTGTGATTGTTTTAGGACTCCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGAGTACTTCTCAGTTTaGCCTACAATGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGEYFSV*PTMKSR
Trigger: CCTGGACTTCATTGTAGGGCAAACTGAGAAGTACTC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAACGCCTCTGGGTCTCTaGATCATTGCCTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYITPLGL*IIAFLL
Trigger: CAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTCATCTTCATCTGGATaGCAACGCTGCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASSSSG*QRCLLH
Trigger: ATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCACTGTCTTCTTGAGCTaGCTCTTCAACTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGTVFLS*LFNCFL
Trigger: GAGGAAACAGTTGAAGAGGCAGCTCAAGAAGACAGT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAGAATCCGACTGACTaGTACTGTCTTCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGQNPTD*YCLLEL
Trigger: CAGCTCAAGAAGACAGTAGCAGTCAGTCGGATTCTG...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCACAAGGAGTCCTAAAACAATCACACAAGCACAATGAGGGAGGTGAGAGAATTGATTGCTGCCTGTCATaGCGTCCGACACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: PQGVLKQSHKHNEGGERIDCCLS*RPTPSV
Trigger: CACAGATGGTGTCGGACGGCATGACAGGCAGCAATC...AATTCTCTCACCTCCCTCATTGTGCTTGTGTGATTGTTTTAGGACTCCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp TTTCATCCCCAAATATACAATGGATATTTGCCGCTAAAACAGACTGCTGGGCACCAGGAGACACAGGATTaGTGCCTGTCATGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: FHPQIYNGYLPLKQTAGHQETQD*CLSCRP
Trigger: CGGACGGCATGACAGGCAGCAATCCTGTGTCTCCTG...GTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGATCAAGGCCTGTCTCTaGTCCACTCTAGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWIKACL*STLVDP
Trigger: TGGGTCTACTAGAGTGGAGCAGAGACAGGCCTTGAT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCAAAAACAACAGTGTCTaGTCCTGTCAGGTTCACACC +
Preference number: 4 (lower is better)
Translates to: SKTSSSGYQSQAWARESGKNNSV*SCQVHT
Trigger: GGTGTGAACCTGACAGGAGCAGACACTGTTGTTTTT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTTCCACTTGTTCTTCTaGCTGTTTGAGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAFHLFF*LFELLS
Trigger: CGAGAGGAGCTCAAACAGGCAGAAGAACAAGTGGAA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAGGCACAAAGGTGTTaGAGGTATGATGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWAREAQRC*RYDGRM
Trigger: CATCCTCCCATCATACCTGCAACACCTTTGTGCCTC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCAATTCGGCGCAGCTTaGCCTGTTCCTCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLQFGAA*PVPLSE
Trigger: CTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAGTGACTGCCATCGTTaGGACTTGAAATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASDCHR*DLKFLM
Trigger: CATCAAGAATTTCAAGTCCCAACGATGGCAGTCACT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGACCTTCATTATATTCTTaGCTTCCTTCAATCATGCCA +
Preference number: 4 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGPSLYS*LPSIMP
Trigger: TGGCATGATTGAAGGAAGCCAAGAATATAATGAAGG...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGCTAAAGCAGATGCCTaGGGTGATGAACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSAKADA*GDERGG
Trigger: ACCTCCCCGTTCATCACCCCAGGCATCTGCTTTAGC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGACAATGTTTGAGTTaGACCTACTGGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGRQCLS*TYWSSW
Trigger: CCAGGAGGACCAGTAGGTCCAACTCAAACATTGTCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGTTGCCTCCTTCAATaGCCATATCTCCCAACATTC +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKSCLLQ*PYLPTF
Trigger: GAATGTTGGGAGATATGGCCATTGAAGGAGGCAACT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCATAGCGCTCAATaGGAGTCAGCTGTTCTACTA +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAWHSAQ*ESAVLL
Trigger: TAGTAGAACAGCTGACTCCCATTGAGCGCTATGCCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGGAGTAGGCAAGATATaGACAGGAAGAATGGTTACT +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQGVGKI*TGRMVT
Trigger: AGTAACCATTCTTCCTGTCCATATCTTGCCTACTCC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGATATCAACAGCCACTaGCAAAAGATCCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFDINSH*QKILWR
Trigger: TCTCCAAAGGATCTTTTGCCAGTGGCTGTTGATATC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TTTCATCCCCAAATATACAATGGATATTTGCCGCTAAAACAGACTGCTGGGCACCTCTTCTCCCACTTCTaGCCCCTGTTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FHPQIYNGYLPLKQTAGHLFSHF*PLLTRS
Trigger: TGACCTGGTCAACAGGGGTCAGAAGTGGGAGAAGAG...GTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTTTCCATCTGCGTTCCTaGGCAAAGTCAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSFHLRS*AKSAES
Trigger: GCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAA...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTCTTCCTCTTGGGGTTaGAAGTCCCCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRSSSWG*KSPSSS
Trigger: TGATGAAGATGGGGACTTTCAACCCCAAGAGGAAGA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGCTTGGCTCTGGGACTaGGCATCCTCCGACTCATCA +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKAWLWD*ASSDSS
Trigger: TGATGAGTCGGAGGATGCTCAGTCCCAGAGCCAAGC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTTTCGAGTTGAAAGGATaGAGCAGAATATGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFFELKG*SRICVC
Trigger: ACAAACGCATATTCTGCTTCATCCTTTCAACTCGAA...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGACCCCCACTTCGAGTTaGAAGGATGAAGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGTPTSS*KDEAEY
Trigger: ATATTCTGCTTCATCCTTTCAACTCGAAGTGGGGGT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGTTAATACAGAGGTTTaGGCTTGTAAGGGGGTACAA +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSVNTEV*ACKGVQ
Trigger: TTGTACCCCCTTACAAGCTCAAACCTCTGTATTAAC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGTCTCCCGAGTTCCTATaGGTCTCCAAAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWSPEFL*VSKSSS
Trigger: TGATGAGCTTTTGGAGACTCATAGGAACTCGGGAGA...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGCCCCTGCATATTGCTaGAGTAGCTCCTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSAPAYC*SSSSID
Trigger: GTCTATGGAGGAGCTACTGCAGCAATATGCAGGGGC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATATCCATGAGGCTATTCTaGAAGGGAGTTCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYISMRLF*KGVPVR
Trigger: CCTGACAGGAACTCCCTTGCAGAATAGCCTCATGGA...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCCTGAGGTCAGGTTCTaGAACAGTTACTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWPEVRF*NSYCFR
Trigger: CCTGAAACAGTAACTGTTGCAGAACCTGACCTCAGG...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGACCAGGTCAGCAGCATaGGATAAGCTGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLTRSAA*DKLNPS
Trigger: GGAGGGGTTCAGCTTATCCCATGCTGCTGACCTGGT...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGTTCTTCAACCTCAATaGTCTCCTCATCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKVLQPQ*SPHHLP
Trigger: AGGAAGATGATGAGGAGACCATTGAGGTTGAAGAAC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTCACCATCAGAGCTATTaGCTTCAACTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFHHQSY*LQLHLH
Trigger: ATGAAGATGAAGTTGAAGCCAATAGCTCTGATGGTG...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCAAAGTATAACCCTTaGGCTGGAGACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRPKYNP*AGDFQL
Trigger: CAGCTGAAAGTCTCCAGCCCAAGGGTTATACTTTGG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGACGTGATACACACATaGAAAGCATTGGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTDVIHT*KALGLV
Trigger: GACCAAGCCCAATGCTTTCCATGTGTGTATCACGTC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGACGTGATACACACATaGAAAGCATTGGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARDVIHT*KALGLV
Trigger: GACCAAGCCCAATGCTTTCCATGTGTGTATCACGTC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTAGTGACTGCCATCGTTaGGACTTGAAATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSSDCHR*DLKFLM
Trigger: CATCAAGAATTTCAAGTCCCAACGATGGCAGTCACT...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGGCTAAAGCAGATGCCTaGGGTGATGAACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLAKADA*GDERGG
Trigger: ACCTCCCCGTTCATCACCCCAGGCATCTGCTTTAGC...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGTCAGTTTGTTGCCCTaGATTTGGAAGGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWVSLLP*IWKVRG
Trigger: ACCTCTCACCTTCCAAATCCAGGGCAACAAACTGAC...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGACAATCCACCAAGAGTaGGTGCTAAAGTTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRTIHQE*VLKLGL
Trigger: TAGCCCCAACTTTAGCACCCACTCTTGGTGGATTGT...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGCTTCTAGGAACTTCATaGCATAGCGCTCAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARLLGTS*HSAQWE
Trigger: CTCCCATTGAGCGCTATGCCATGAAGTTCCTAGAAG...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGCTATGAAGGTGGATTaGGTTGGGGTAGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARAMKVD*VGVDSE
Trigger: TTCACTGTCTACCCCAACCCAATCCACCTTCATAGC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp AAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTTGGAGGTCCATCCAGTaGGGAATCTTGAGCTATATG +
Preference number: 4 (lower is better)
Translates to: KVPYIGTCHKELELQRLVWRSIQ*GILSYM
Trigger: CATATAGCTCAAGATTCCTCACTGGATGGACCTCCA...AACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR TCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAACAGCATGGGATAAGCTaGACCCCTCCAGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKQHGIS*TPPEEL
Trigger: CAGTTCCTCTGGAGGGGTTCAGCTTATCCCATGCTG...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAACTCTTCTCCCACTTCTaGCCCCTGTTGACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKLFSHF*PLLTRS
Trigger: TGACCTGGTCAACAGGGGTCAGAAGTGGGAGAAGAG...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGTTCCATCTGCGTTCCTaGGCAAAGTCAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLFHLRS*AKSAES
Trigger: GCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAA...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGTTCTCACAGGCCAAGTaGGCAAGCAAGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLFSQAK*ASKEMV
Trigger: GACCATCTCCTTGCTTGCTCACTTGGCCTGTGAGAA...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCGCTGGTCGGAACAATaGTTAAATGGGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLRWSEQ*LNGDPS
Trigger: ACTGGGGTCCCCATTTAATCATTGTTCCGACCAGCG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTTCTTGTGGCTTTTCTaGGTTGGAAATTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAFLWLF*VGNWDL
Trigger: CAGATCCCAATTTCCAACTCAGAAAAGCCACAAGAA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTCTGGATGCCAACGCTaGTTGTTACATTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARSGCQR*LLHCVT
Trigger: TGTCACACAATGTAACAAGCAGCGTTGGCATCCAGA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTACCTCCCCTTCCAACTaGTCTTCAGCTGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSTSPSN*SSAAIV
Trigger: CACTATAGCAGCTGAAGAGCAGTTGGAAGGGGAGGT...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCCTTCATTATATTCTTaGCTTCCTTCAATCATGCCA +
Preference number: 4 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQPSLYS*LPSIMP
Trigger: TGGCATGATTGAAGGAAGCCAAGAATATAATGAAGG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
3UTR CAA 72 bp CGAGACTGTTGTTTGAATTGTACCACCTTCTCCACATaGCTCCAGAACTGCCTAACATCCTTGGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: RDCCLNCTTFST*LQNCLTSLAMV
Trigger: TACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR TCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTTGTGGAGGCGTTTaGCTAGACCTTCATTATATT +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRPCGGV*LDLHYI
Trigger: AATATAATGAAGGTCTAGTCAAACGCCTCCACAAGG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGCTCAAGTCAGGGAACTaGGTACGCATATTACATACA +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWLKSGN*VRILHT
Trigger: TGTATGTAATATGCGTACTCAGTTCCCTGACTTGAG...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGATGGCCATGGTAGGTaGGAAATTGCTCTAATACAT +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARDGHGR*EIALIH
Trigger: ATGTATTAGAGCAATTTCTCACCTACCATGGCCATC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp AAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTGCTTCATGTTTGGCTTaGTCTGCAATTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: KVPYIGTCHKELELQRLVASCLA*SAISAW
Trigger: CCATGCAGAAATTGCAGAGCAAGCCAAACATGAAGC...AACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTCATCTTCATCTGGATaGCAACGCTGCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRSSSSG*QRCLLH
Trigger: ATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCTGGAGACTTTCAGCTaGTGCAGCAATATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRLETFS*CSNISN
Trigger: ATTACTGATATTGCTGCAGCAGCTGAAAGTCTCCAG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp AGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATGGATATTTGCCGGAGACACAGGATTGCTaGCTGTCATGCCGTCCGACA +
Preference number: 4 (lower is better)
Translates to: SQRVKESFHPQIYNGYLPETQDC*LSCRPT
Trigger: TGTCGGACGGCATGACAGGCAGCAATCCTGTGTCTC...CGGCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGAAATATGAGTTTGTTTaGTGGCCACAGCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARKYEFV*WPQPPL
Trigger: AAGAGGAGGCTGTGGCCAGCAAACAAACTCATATTT...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CGAGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATGGATATTTGCTGTGGTACCATCTTGTaGGCCTGGAGGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RVKESKSPFIPKYTMDICCGTIL*AWRSIQ
Trigger: CTGGATGGACCTCCAGGCCCACAAGATGGTACCACA...GCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CCA 90 bp CGAGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATGGATATTTGCACCAGGTCAGCAGCATaGGATAAGCTGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: RVKESKSPFIPKYTMDICTRSAA*DKLNPS
Trigger: GGAGGGGTTCAGCTTATCCCATGCTGCTGACCTGGT...GCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAATGTCGCTGCTCTTCATaGTGCCGGATCACCATACGT +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKCRCSS*CRITIR
Trigger: ACGTATGGTGATCCGGCACCATGAAGAGCAGCGACA...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTTCATCATCTTCATCTaGATGCCAACGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARFIIFI*MPTLLV
Trigger: AACAAGCAGCGTTGGCATCCAGATGAAGATGATGAA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGGAACAATGATTAAATaGGGACCCCAGTTACCTTTC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARGTMIK*GPQLPF
Trigger: GAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGGTCGCAGAACCTTGTaGAGGCGTTTGACTAGACCT +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKGRRTL*RRLTRP
Trigger: AGGTCTAGTCAAACGCCTCCACAAGGTTCTGCGACC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGATGACACTCATAAAATaGCCTGTAGCTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRMTLIK*PVASVS
Trigger: GGAGACACTAGCTACAGGCCATTTTATGAGTGTCAT...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGTGCTAAAGTCTGGGTaGCAGATAAATCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSVLKSG*QINPEW
Trigger: CCACTCTGGATTTATCTGCCACCCAGACTTTAGCAC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCTGCTACTGTCTTCTTaGGCTGCCTCTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLLLLSS*AASSTV
Trigger: AACAGTTGAAGAGGCAGCTCAAGAAGACAGTAGCAG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGACTCATTTCTTCCTCTaGATGTTCATCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARTHFFL*MFIFLI
Trigger: GATGAGGAAGATGAACATTCAGAGGAAGAAATGAGT...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp GACTGTTGTTTGAATTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATTGCTCTGCAATTTCTaGATGGCTCTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: DCCLNCTTFSTLLQNCLTLLCNF*MALLPL
Trigger: AAGTGGGAGAAGAGCCATGCAGAAATTGCAGAGCAA...TGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTGCTTCATGTTTGGCTTaGTCTGCAATTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSASCLA*SAISAW
Trigger: CCATGCAGAAATTGCAGAGCAAGCCAAACATGAAGC...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TTTCATCCCCAAATATACAATGGATATTTGCCGCTAAAACAGACTGCTGGGCACACATTGCTCCAGAACTaGCTAACATCCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: FHPQIYNGYLPLKQTAGHTLLQN*LTSLAM
Trigger: CATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGT...GTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAACTGCTCTTCAGCTaGTATAGTGTCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSQLLFS*YSVLFI
Trigger: GATGAAGAGGACACTATAGCAGCTGAAGAGCAGTTG...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTACTTTTTGGGCATCTaGTTCTCAACATCCACCTTA +
Preference number: 4 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRYFLGI*FSTSTL
Trigger: TAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCGGCACCGGATAACATaGTCATACTTTTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLRHRIT*SYFLGI
Trigger: GATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATATTCATCATCTTCATCTaGATGCCAACGCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIFIIFI*MPTLLV
Trigger: AACAAGCAGCGTTGGCATCCAGATGAAGATGATGAA...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCCAAAGTATAACCCTTaGGCTGGAGACTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLPKYNP*AGDFQL
Trigger: CAGCTGAAAGTCTCCAGCCCAAGGGTTATACTTTGG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSLLPWI*KVRGLL
Trigger: AAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAA...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR TCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAACTCATTTCTTCCTCTaGATGTTCATCTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYITHFFL*MFIFLI
Trigger: GATGAGGAAGATGAACATTCAGAGGAAGAAATGAGT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGCAACTGCTCTTCAGCTaGTATAGTGTCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLQLLFS*YSVLFI
Trigger: GATGAAGAGGACACTATAGCAGCTGAAGAGCAGTTG...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAACAGAATCCGACTGACTaGTACTGTCTTCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKQNPTD*YCLLEL
Trigger: CAGCTCAAGAAGACAGTAGCAGTCAGTCGGATTCTG...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGATTCTCATTAAATTCTaGAAGCTCAGCCACTTGTTC +
Preference number: 4 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWILIKF*KLSHLF
Trigger: GAACAAGTGGCTGAGCTTGCAGAATTTAATGAGAAT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CCA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATACACCATCAGAGCTATTaGCTTCAACTTCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIHHQSY*LQLHLH
Trigger: ATGAAGATGAAGTTGAAGCCAATAGCTCTGATGGTG...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
3UTR CAA 72 bp AAAGAGTCCTTTCATCCCCAAATATACAATGGATATTaGCCGCTAAAACAGACTGCTGGGCACTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KESFHPQIYNGY*PLKQTAGHCSE
Trigger: TTCGGAACAGTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAAGGACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR GCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGCTTCATGTTTGGCTTaGTCTGCAATTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKASCLA*SAISAW
Trigger: CCATGCAGAAATTGCAGAGCAAGCCAAACATGAAGC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR TCA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTAAATTCTTGATGTTCTaGGCCTCATCCAGAATAAGA +
Preference number: 4 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSKFLMF*ASSRIR
Trigger: TCTTATTCTGGATGAGGCTCAGAACATCAAGAATTT...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR GCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAACTGGAGACTTTCAGCTaGTGCAGCAATATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKLETFS*CSNISN
Trigger: ATTACTGATATTGCTGCAGCAGCTGAAAGTCTCCAG...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGGAACAATGATTAAATaGGGACCCCAGTTACCTTTC +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKGTMIK*GPQLPF
Trigger: GAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR GCA 90 bp CTCGAGTCAAAGAGTCAAAGAGTCCTTTCATCCCCAAATATACAATGGATATTTTTGCTCTGCAATTTCTaGATGGCTCTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LESKSQRVLSSPNIQWIFLLCNF*MALLPL
Trigger: AAGTGGGAGAAGAGCCATGCAGAAATTGCAGAGCAA...AAATATCCATTGTATATTTGGGGATGAAAGGACTCTTTGACTCTTTGACTCGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR TCA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAAAATTCTTGATGTTCTaGGCCTCATCCAGAATAAGA +
Preference number: 4 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKKFLMF*ASSRIR
Trigger: TCTTATTCTGGATGAGGCTCAGAACATCAAGAATTT...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS TCA 90 bp GGCCACATGGGCAGGCTGGCTGATGAGGTGGTGCTGACCCCCTGCTaGCACCAGGTGCACCACATTCCTTTGCAGCGGGCGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GHMGRLADEVVLTPC*HQVHHIPLQRAGLP
Trigger: GGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCACCTGGTGTCAGCAGGGGGTCAGCACCACCTCATCAGCCAGCCTGCCCATGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp GCCTGGACGAGGGCCACATGGGCAGGCTGGCTGATGAGGTGGTGCTaGCCCCCTGCTGACACCAGGTGCACCACATTCCTTTGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: AWTRATWAGWLMRWC*PPADTRCTTFLCSG
Trigger: CCCGCTGCAAAGGAATGTGGTGCACCTGGTGTCAGCAGGGGGTCAGCACCACCTCATCAGCCAGCCTGCCCATGTGGCCCTCGTCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CCA 90 bp GGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GICSGRGCPTASWRT*APVKVSLLPWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 90 bp GGAGCAGCTCCGGGTGCTGAAGCACTGACTTCAGGCGAAGGACTGTaGACCAGCTTGAGGAGGGGCCTCACCAGAGTGGGTGTGGGTATG +
Preference number: 5 (lower is better)
Translates to: GAAPGAEALTSGEGL*TSLRRGLTRVGVGM
Trigger: CATACCCACACCCACTCTGGTGAGGCCCCTCCTCAAGCTGGTCCACAGTCCTTCGCCTGAAGTCAGTGCTTCAGCACCCGGAGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp AGGAGGAGGAGCAGGAGGAGGAGGAGGAGGACGAGGCCTAGGCACTaGCCTGGGAATTCTTTCTCTCACAGGGCTGCATTGGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: RRRSRRRRRRTRPRH*PGNSFSHRAALGRH
Trigger: GTGCCTCCCCAATGCAGCCCTGTGAGAGAAAGAATTCCCAGGCCAGTGCCTAGGCCTCGTCCTCCTCCTCCTCCTCCTGCTCCTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGGGGGAGGAGCCAGCTTaGCTGGAGGCCGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRGEEPA*LEAGGW
Trigger: CCAGCCACCGGCCTCCAGCAAAGCTGGCTCCTCCCC...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS GCA 90 bp CCTGTATTGTTCACCATGGATGGTGGCATTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: PVLFTMDGGICSGRG*PTASWRTWAPVKVS
Trigger: ACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCCACCATCCATGGTGAACAATACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 90 bp ATGGATGGTGGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: MDGGICSGRGCPTAS*RTWAPVKVSLLPWI
Trigger: AATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCCACCATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 90 bp GACTCCCACGGGGGATGGCAACACCTGGGGGAGAGGACCAGTATTTaGCTGCAAGGGAGACAAGAGAACAGGTCCAGGTGGCCGAGATGC +
Preference number: 5 (lower is better)
Translates to: DSHGGWQHLGERTSI*LQGRQENRSRWPRC
Trigger: GCATCTCGGCCACCTGGACCTGTTCTCTTGTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGTGTTGCCATCCCCCGTGGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FLCSGRGCPTASWRT*APVKVSLLPWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CCA 90 bp TGCACCACATTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CTTFLCSGRGCPTAS*RTWAPVKVSLLPWI
Trigger: AATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCGGTGGCCCTCCGCCTaGAGCTGCCGTAACAGCACA +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYRWPSA*SCRNST
Trigger: TGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp AGGTCCAGGTGGCCGAGATGCAGGAACAACTGGTGTTCCGGCAGGTaGAGCCGACACCATGAGTGGTGCTGGCAACACTGGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: RSRWPRCRNNWCSGR*SRHHEWCWQHWRNW
Trigger: CCAGTTCCTCCAGTGTTGCCAGCACCACTCATGGTGTCGGCTTCACCTGCCGGAACACCAGTTGTTCCTGCATCTCGGCCACCTGGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp GTCCCCGCATCCCTTCAGCTTCAAGCCGAAGACGGGCCAGGCGGGTaGGAGGACGGCTTCCATCCTCATCAGAGGAACTGCCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: VPASLQLQAEDGPGG*EDGFHPHQRNCLHF
Trigger: AAAGTGAAGGCAGTTCCTCTGATGAGGATGGAAGCCGTCCTCTCACCCGCCTGGCCCGTCTTCGGCTTGAAGCTGAAGGGATGCGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp AGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTaGTCTTCATGGTGCCGGATCACCATACGTACCACCTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLACSSLRARSSFCR*SSWCRITIRTTFRA
Trigger: GGCCCGGAAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS GCA 90 bp CCACAACTCTCAAGAATAGAAGAGCTGTCGGGGTCCAAGACAGGGTaGTGGCTGGGCCTTGGTGATGGTGGGTTCTTGGGAGGTCGGCCC +
Preference number: 5 (lower is better)
Translates to: PQLSRIEELSGSKTG*WLGLGDGGFLGGRP
Trigger: GGGCCGACCTCCCAAGAACCCACCATCACCAAGGCCCAGCCAGCACCCTGTCTTGGACCCCGACAGCTCTTCTATTCTTGAGAGTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp GAGAGGACGGCTTCCATCCTCATCAGAGGAACTGCCTTCACTTTCTaGCTGGCCCAGGGGTTGGCGCTGCACTCCCAGTCCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: ERTASILIRGTAFTF*LAQGLALHSQSTTL
Trigger: GAGAGTTGTGGACTGGGAGTGCAGCGCCAACCCCTGGGCCAGGCAGAAAGTGAAGGCAGTTCCTCTGATGAGGATGGAAGCCGTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp GGCCGTGAGGTCCCACTCATGACTCCCACGGGGGATGGCAACACCTaGGGGAGAGGACCAGTATTTGGCTGCAAGGGAGACAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: GREVPLMTPTGDGNT*GRGPVFGCKGDKRT
Trigger: TGTTCTCTTGTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGTGTTGCCATCCCCCGTGGGAGTCATGAGTGGGACCTCACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp AGTGTGGTATTGGTCCCCTCCACAGGACCTGGCACCTCCTGCTGCTaGCCATTGGGGATGCTCTCAGCTTCCAGGGTTGAACTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: SVVLVPSTGPGTSCC*PLGMLSASRVELGA
Trigger: TGCACCCAGTTCAACCCTGGAAGCTGAGAGCATCCCCAATGGTCAGCAGCAGGAGGTGCCAGGTCCTGTGGAGGGGACCAATACCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp TCTTCTTGGGAGGCCTCCCCCTCCGACGTTTCACAGCAGGTGGAGTaGTGGCAAGCTCTGTTCCTTCTCCATTCTCTGGGCTTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSWEASPSDVSQQVE*WQALFLLHSLGFPQ
Trigger: CTGGGGGAAGCCCAGAGAATGGAGAAGGAACAGAGCTTGCCATCACTCCACCTGCTGTGAAACGTCGGAGGGGGAGGCCTCCCAAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp TCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATGGTaGCGGATCACCATACGTACCACCTTCCGGGCCACACCTCGTTTC +
Preference number: 5 (lower is better)
Translates to: SSLRARSSFCRCSSW*RITIRTTFRATPRF
Trigger: GAAACGAGGTGTGGCCCGGAAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CCA 90 bp TGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATaGTGCCGGATCACCATACGTACCACCTTCCGGGCCACACCTCGT +
Preference number: 5 (lower is better)
Translates to: CSSLRARSSFCRCSS*CRITIRTTFRATPR
Trigger: ACGAGGTGTGGCCCGGAAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CCA 90 bp ACCTGGAGCTGGGCCCACTGGAGAACTTGGAGGCAGAGGGGGTACTaGAGCCAGAGACAATGTTTGAGTTGGACCTACTGGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TWSWAHWRTWRQRGY*SQRQCLSWTYWSSW
Trigger: CCAGGAGGACCAGTAGGTCCAACTCAAACATTGTCTCTGGCTCCAGTACCCCCTCTGCCTCCAAGTTCTCCAGTGGGCCCAGCTCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TGGCTGGGGCCAGGAGAACGAGGACCAATGGGGCTGGCAACAGGTTaGGGCAAGGTACAGAAATCCAGGACTTCAGTCCCATACACGGGT +
Preference number: 5 (lower is better)
Translates to: WLGPGERGPMGLATG*GKVQKSRTSVPYTG
Trigger: ACCCGTGTATGGGACTGAAGTCCTGGATTTCTGTACCTTGCCCCAACCTGTTGCCAGCCCCATTGGTCCTCGTTCTCCTGGCCCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp GGACGGCTTCCATCCTCATCAGAGGAACTGCCTTCACTTTCTGCCTaGCCCAGGGGTTGGCGCTGCACTCCCAGTCCACAACTCTCAAGA +
Preference number: 5 (lower is better)
Translates to: GRLPSSSEELPSLSA*PRGWRCTPSPQLSR
Trigger: TCTTGAGAGTTGTGGACTGGGAGTGCAGCGCCAACCCCTGGGCCAGGCAGAAAGTGAAGGCAGTTCCTCTGATGAGGATGGAAGCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGGGGAGGAGCCAGCTTaGCTGGAGGCCGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAGEEPA*LEAGGW
Trigger: CCAGCCACCGGCCTCCAGCAAAGCTGGCTCCTCCCC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp TGGGTTCTTGGGAGGTCGGCCCCGCTTCCGCTTCGGTGGGGATGTTaGAATGGTGACAGTAGTGACAGTGTTGGTGACAGCAGTGGGACA +
Preference number: 5 (lower is better)
Translates to: WVLGRSAPLPLRWGC*NGDSSDSVGDSSGT
Trigger: TGTCCCACTGCTGTCACCAACACTGTCACTACTGTCACCATTTCAACATCCCCACCGAAGCGGAAGCGGGGCCGACCTCCCAAGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp TCAGGGGTGCTGGGAAAGGGAGCGACTGTGTTCGGCTCTCTAAATTaGCGCCTCCTGGAGAGGATATGGTCCCAGGAATGGGCAAATCCC +
Preference number: 5 (lower is better)
Translates to: SGVLGKGATVFGSLN*RLLERIWSQEWANP
Trigger: GGGATTTGCCCATTCCTGGGACCATATCCTCTCCAGGAGGCGGCAATTTAGAGAGCCGAACACAGTCGCTCCCTTTCCCAGCACCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TCCAATGCTGACCACTTCTCCAGCCTGGGGGAGAGGACCAGTATTTaGCTGCAAGGGAGACAAGAGAACAGGTCCAGGTGGCCGAGATGC +
Preference number: 5 (lower is better)
Translates to: SNADHFSSLGERTSI*LQGRQENRSRWPRC
Trigger: GCATCTCGGCCACCTGGACCTGTTCTCTTGTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGCTGGAGAAGTGGTCAGCATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186954.5
CDS CCA 90 bp GTGGTCCAGAGGCTGCTGAGACAACAGCTAGTGCTGGGGTCACACTaGTCAACAGAGCTGGACCTAAGTCTGAAACAGGCAAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VVQRLLRQQLVLGSH*STELDLSLKQARGL
Trigger: CAGCCCCCTTGCCTGTTTCAGACTTAGGTCCAGCTCTGTTGACCAGTGTGACCCCAGCACTAGCTGTTGTCTCAGCAGCCTCTGGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGACACACATGGAAAGCATaGGGCTTGGTCCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGHTWKA*GLVQPC
Trigger: GCAGGGCTGGACCAAGCCCAATGCTTTCCATGTGTG...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGAAGACAGCGTTGCCGCTaGGAAAGTCGGCACCGGATA +
Preference number: 5 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGRQRCR*ESRHRI
Trigger: TATCCGGTGCCGACTTTCCAAGCGGCAACGCTGTCT...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGTGTCTGGGCTGGTGTaGGTACCAGGGATGATGCTG +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYVSGLV*VPGMML
Trigger: CAGCATCATCCCTGGTACCAACACCAGCCCAGACAC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGGTGATGGTGGGTTCTaGGGAGGTCGGCCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: SKTSSSGYQSQAWARESGGDGGF*GGRPRF
Trigger: GAAGCGGGGCCGACCTCCCAAGAACCCACCATCACC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCTTCAGTGACAGGGTaGGTGTGGGAGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQASVTG*VWEAVR
Trigger: CCTCACGGCCTCCCACACCAACCCTGTCACTGAAGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGTGCACCACATTCCTTaGCAGCGGGCGGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGVHHIP*QRAGLP
Trigger: GGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCAC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CCA 90 bp CCTTCCTCTTCCTCGTGGGGTAGTCGGAACACCTCCTCCTTGGCTTaGTCCAGGTCTTTTCGGGCAGCTTCCACTTGTTCTTCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PSSSSWGSRNTSSLA*SRSFRAASTCSSAC
Trigger: ACAGGCAGAAGAACAAGTGGAAGCTGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGACTACCCCACGAGGAAGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CTGGTCCTTCCTCTTCCTCGTGGGGTAGTCGGAACACCTCCTCCTTaGCTTGGTCCAGGTCTTTTCGGGCAGCTTCCACTTGTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LVLPLPRGVVGTPPP*LGPGLFGQLPLVLL
Trigger: CAGAAGAACAAGTGGAAGCTGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGACTACCCCACGAGGAAGAGGAAGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CAGGGCCCACTGCTAGGAGGTGAGGATTCTGGCCCTGACATACTGTaGATCGATGGGCTTCTTGGACTGGCGCTAACTTCAGATACCCCA +
Preference number: 5 (lower is better)
Translates to: QGPLLGGEDSGPDIL*IDGLLGLALTSDTP
Trigger: TGGGGTATCTGAAGTTAGCGCCAGTCCAAGAAGCCCATCGATCCACAGTATGTCAGGGCCAGAATCCTCACCTCCTAGCAGTGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TCTGTTCTTCTTGGGAGGCCTCCCCCTCCGACGTTTCACAGCAGGTaGAGTGATGGCAAGCTCTGTTCCTTCTCCATTCTCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SVLLGRPPPPTFHSR*SDGKLCSFSILWAS
Trigger: GGAAGCCCAGAGAATGGAGAAGGAACAGAGCTTGCCATCACTCCACCTGCTGTGAAACGTCGGAGGGGGAGGCCTCCCAAGAAGAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CAATTCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCTCTGTGTCTGTAGGATaGGGAGCTGAGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: QFGAAWPVPLSELAPPFVSVSVG*GAEDEQ
Trigger: CTGCTCATCCTCAGCTCCCAATCCTACAGACACAGA...GACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCAATTCGGCGCAGCTaGGCCTGTTCCTCTCTCCGA +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQAIRRS*ACSSLR
Trigger: TCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTGGAAAGCATTGGGCTaGGTCCAGCCCTGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: DPPASAGIKGVYLYHWPAWKALG*VQPCRL
Trigger: CAAGCGGCAGGGCTGGACCAAGCCCAATGCTTTCCA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGCAGGAGACACAGGATaGCTGCCTGTCATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQAGDTG*LPVMPS
Trigger: GGACGGCATGACAGGCAGCAATCCTGTGTCTCCTGC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGGAGCCCTGATTTTCTaGCTGCGCCGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSGALIF*LRRWLA
Trigger: AGCCAGCCACCGGCGCAGCAAGAAAATCAGGGCTCC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGGAGATCTGTTCTTCTaGGGAGGCCTCCCCCTCCGA +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFGDLFF*GGLPLR
Trigger: TCGGAGGGGGAGGCCTCCCAAGAAGAACAGATCTCC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp GGGGAGGAGCCAGCTTTGCTGGAGGCCGGTGGCTGGTTAAGGCTCTaGGACAGAAGGTCTGAGTACTTCTCAGTTTGCCCTACAATGAAG +
Preference number: 5 (lower is better)
Translates to: GEEPALLEAGGWLRL*DRRSEYFSVCPTMK
Trigger: CTTCATTGTAGGGCAAACTGAGAAGTACTCAGACCTTCTGTCTCAGAGCCTTAACCAGCCACCGGCCTCCAGCAAAGCTGGCTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 90 bp GTGTCTCAGGCTCATCCTTGGGAACAGGTAGCCGGTTTACCATGGTaGCAGGCAAGGAAGCGGCACCAGATGCTGAAACAAGGGAAGACG +
Preference number: 5 (lower is better)
Translates to: VSQAHPWEQVAGLPW*QARKRHQMLKQGKT
Trigger: CGTCTTCCCTTGTTTCAGCATCTGGTGCCGCTTCCTTGCCTGTCACCATGGTAAACCGGCTACCTGTTCCCAAGGATGAGCCTGAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp CAGAAATCCAGGACTTCAGTCCCATACACGGGTGCCAGAGCCCCATaGGCCTCACTAAGTTGGAAAATCCGATCCAGGCGCTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: QKSRTSVPYTGARAP*ASLSWKIRSRRSDR
Trigger: GCGATCTGAGCGCCTGGATCGGATTTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACCCGTGTATGGGACTGAAGTCCTGGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp GGATCACCATACGTACCACCTTCCGGGCCACACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAGCAGAGAGCCACTGCATCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GSPYVPPSGPHLVSI*VPEQSQQRATASLH
Trigger: GTGAAGAGATGCAGTGGCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTGTGGCCCGGAAGGTGGTACGTATGGTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS GCA 90 bp GAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTGGACGTTGTaGCAAGGAAGCCAACTGTCCAATGCTGACCACTTCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EGERFASPSTSHWTL*QGSQLSNADHFSSL
Trigger: CAGGCTGGAGAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186954.5
CDS GCA 90 bp ATGATGGGAGGATGTGACAGGAGTGTGGTTTGCTCCTTGAGTTTCTaGCCGAGCTCCACGAAGACGTTCACTGACACGAGTCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: MMGGCDRSVVCSLSF*PSSTKTFTDTSPQP
Trigger: AGGCTGGGGACTCGTGTCAGTGAACGTCTTCGTGGAGCTCGGGCAGAAACTCAAGGAGCAAACCACACTCCTGTCACATCCTCCCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TCAGGTGCAGTTGCTATCTCTAACAGTATGCGGTGGGAAAGACGGTaGCGGGGCAGAAATGTGTCAGCCTCATATCGAGAGACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: SGAVAISNSMRWERR*RGRNVSASYRETRP
Trigger: GGGCCGAGTCTCTCGATATGAGGCTGACACATTTCTGCCCCGCCACCGTCTTTCCCACCGCATACTGTTAGAGATAGCAACTGCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TGGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTGGACGT +
Preference number: 5 (lower is better)
Translates to: WRTWAPVKVSLLPWI*KVRGLLPPALVTGR
Trigger: ACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp AATACATCCAGCATTCGGGTCATCTGGGTAAAAATGAGCACCCGGTaGCCCTCCGCCTTGAGCTGCCGTAACAGCACAGCCAATGTCTGC +
Preference number: 5 (lower is better)
Translates to: NTSSIRVIWVKMSTR*PSALSCRNSTANVC
Trigger: GCAGACATTGGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGATGACCCGAATGCTGGATGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CACAGCAGGTGGAGTGATGGCAAGCTCTGTTCCTTCTCCATTCTCTaGGCTTCCCCCAGTAGTCGTCCCCAGTTCATTGTGACGACAAGC +
Preference number: 5 (lower is better)
Translates to: HSRWSDGKLCSFSIL*ASPSSRPQFIVTTS
Trigger: GCTTGTCGTCACAATGAACTGGGGACGACTACTGGGGGAAGCCCAGAGAATGGAGAAGGAACAGAGCTTGCCATCACTCCACCTGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCAGGGATCTGTGTCTGTAGGATaGGGAGCTGAGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: QVWRCMHLISVVEGQRQGSVSVG*GAEDEQ
Trigger: CTGCTCATCCTCAGCTCCCAATCCTACAGACACAGA...TCCCTGCCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGTCATGAGAAGGTGTTaGAGAGGGGCTAAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYVMRRC*RGAKRP
Trigger: GGGCCTTTTAGCCCCTCTCAAACACCTTCTCATGAC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGTCAAGGCCAATGTGTaGGTACTCTCGGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFVKANV*VLSELA
Trigger: GGCCAGCTCCGAGAGTACCAACACATTGGCCTTGAC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTCACACATGGAAAGCATaGGGCTTGGTCCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFHTWKA*GLVQPC
Trigger: GCAGGGCTGGACCAAGCCCAATGCTTTCCATGTGTG...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCACCTCCTCCTTGGCTaGGTCCAGGTCTTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSHLLLG*VQVFSG
Trigger: GCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTG...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGCGCTGGTCCCCTTGGTaGGTGGTCCCAACGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARRWSPW*VVPTSL
Trigger: CAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCG...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGATACGCTGGTCCCCTaGGTTGGTGGTCCCAACGAG +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKDTLVP*VGGPNE
Trigger: CTCGTTGGGACCACCAACCAAGGGGACCAGCGTATC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS GCA 90 bp GAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTGGACGTTGTaGCAAGGAAGCCAACTGTCCAATGCTGACCACTTCTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: EGERFASPSTSHWTL*QGSQLSNADHFSRR
Trigger: CCTTCTGGAGAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CGAGGTGGAGGATCAGGTGCAGTTGCTATCTCTAACAGTATGCGGTaGGAAAGACGGTGGCGGGGCAGAAATGTGTCAGCCTCATATCGA +
Preference number: 5 (lower is better)
Translates to: RGGGSGAVAISNSMR*ERRWRGRNVSASYR
Trigger: TCGATATGAGGCTGACACATTTCTGCCCCGCCACCGTCTTTCCCACCGCATACTGTTAGAGATAGCAACTGCACCTGATCCTCCACCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp TGTGCCAAGGAAGCCAACTGTCCAATGCTGACCACTTCTCCAGCCTaGGGGAGAGGACCAGTATTTGGCTGCAAGGGAGACAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: CAKEANCPMLTTSPA*GRGPVFGCKGDKRT
Trigger: TGTTCTCTTGTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGCTGGAGAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186954.5
CDS CCA 90 bp CTGCTGAGGGTGGGAGCTCCAGCCCATTGCTCTCATTCAGACTCATaGTCAATTCCTCACTACCAGGTAGCAGTGTGGTATTGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LLRVGAPAHCSHSDS*SIPHYQVAVWYWSP
Trigger: AGGGGACCAATACCACACTGCTACCTGGTAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAACTGTGGTACCATCTaGTGGGCCTGGAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: DPPASAGIKGVYLYHWPANCGTI*WAWRSI
Trigger: GATGGACCTCCAGGCCCACAAGATGGTACCACAGTT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGGTCATGAGAAGGTGTTaGAGAGGGGCTAAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRVMRRC*RGAKRP
Trigger: GGGCCTTTTAGCCCCTCTCAAACACCTTCTCATGAC...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGAAAGCATTGGGCTaGGTCCAGCCCTGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAWKALG*VQPCRL
Trigger: CAAGCGGCAGGGCTGGACCAAGCCCAATGCTTTCCA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGATCATAGAGACAGCGTaGCCGCTTGGAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRIIETA*PLGKSA
Trigger: TGCCGACTTTCCAAGCGGCAACGCTGTCTCTATGAT...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp TTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTTGGCCATGGTGCAGGAGACACAGGATaGCTGCCTGTCATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: LYHLLHIAPELPNILGHGAGDTG*LPVMPS
Trigger: GGACGGCATGACAGGCAGCAATCCTGTGTCTCCTGC...ACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGGTGGACATCCCGAGTTaGACCAATTCGGTGACAGCG +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQVDIPS*TNSVTA
Trigger: CGCTGTCACCGAATTGGTCAAACTCGGGATGTCCAC...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGAGCTTTCGAAGCACTTaGGGACCTGGGAGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQSFRST*GPGSCP
Trigger: AGGACAGCTCCCAGGTCCCAAAGTGCTTCGAAAGCT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp GGAGAACTTGGAGGCAGAGGGGGTACTGGAGCCAGAGACAATGTTTaGGTTGGACCTACTGGTCCTCCTGGTGCTAAAGATAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GELGGRGGTGARDNV*VGPTGPPGAKDSVW
Trigger: CCAGACACTATCTTTAGCACCAGGAGGACCAGTAGGTCCAACTCAAACATTGTCTCTGGCTCCAGTACCCCCTCTGCCTCCAAGTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp CAGGCAGAAGGCGGGGTAGAAGCAGGAGACGAACTAGGAGGAAGCTaGAGCAGAGGTGGAGTAGGCAAGATATGGACAGGAAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: QAEGGVEAGDELGGS*SRGGVGKIWTGRMV
Trigger: AACCATTCTTCCTGTCCATATCTTGCCTACTCCACCTCTGCTTCAGCTTCCTCCTAGTTCGTCTCCTGCTTCTACCCCGCCTTCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp GTCATCTGGGTAAAAATGAGCACCCGGTGGCCCTCCGCCTTGAGCTaGCGTAACAGCACAGCCAATGTCTGCAACTTTCCACAATCATAC +
Preference number: 5 (lower is better)
Translates to: VIWVKMSTRWPSALS*RNSTANVCNFPQSY
Trigger: GTATGATTGTGGAAAGTTGCAGACATTGGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp CAAGTGGTTCAGCAGATGCTGCTGAGGGTGGGAGCTCCAGCCCATTaGTCTCATTCAGACTCATGGTCAATTCCTCACTACCAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: QVVQQMLLRVGAPAH*SHSDSWSIPHYQVA
Trigger: TGCTACCTGGTAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTGAACCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CTGGATTTGGAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTaGACGTTGTGCCAAGGAAGCCAACTGTCCAATGCTGACCACTTC +
Preference number: 5 (lower is better)
Translates to: LDLEGERFASPSTSH*TLCQGSQLSNADHF
Trigger: GAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CCTGCTGCTGACCATTGGGGATGCTCTCAGCTTCCAGGGTTGAACTaGGTGCAGGAATACAAGGAAGAGTCTTCTCTGATTCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PAADHWGCSQLPGLN*VQEYKEESSLIQAG
Trigger: TCCTGCCTGAATCAGAGAAGACTCTTCCTTGTATTCCTGCACCCAGTTCAACCCTGGAAGCTGAGAGCATCCCCAATGGTCAGCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKSSLLL*SLLFMV
Trigger: CACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGCAATTCGGCGCAGCTaGGCCTGTTCCTCTCTCCGA +
Preference number: 5 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTAIRRS*ACSSLR
Trigger: TCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGACCACCTTCTCCACATaGCTCCAGAACTGCCTAACA +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRTTFST*LQNCLT
Trigger: TGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGT...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGCTCTGGCTGTTAAAGTaGAGCAGTGACTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRLWLLK*SSDCHR
Trigger: ACGATGGCAGTCACTGCTCAACTTTAACAGCCAGAG...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGACAGCGTTGCCGCTaGGAAAGTCGGCACCGGATA +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGRQRCR*ESRHRI
Trigger: TATCCGGTGCCGACTTTCCAAGCGGCAACGCTGTCT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGCACTGTACGGCCTTCTaGCTTGGGCACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARHCTAF*LGHWLQ
Trigger: CTGCAGCCAGTGCCCAAGCAAGAAGGCCGTACAGTG...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTGGAAGGTGAGAGGTTaGCTTCCCCCAGCACTAGTC +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKWKVRG*LPPALV
Trigger: GACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACCCAGTCAAAGTCAGTTaGTTGCCCTGGATTTGGAAG +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYPVKVS*LPWIWK
Trigger: CTTCCAAATCCAGGGCAACAAACTGACTTTGACTGG...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCTGGAAGCCCAGAACTaGAAGGCCGAGGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRLEAQN*KAEVLV
Trigger: CACCAGCACCTCGGCCTTCAAGTTCTGGGCTTCCAG...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACGAGCCAACACAGAAGTaGGAGCTGATACCAATGATG +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYEPTQK*ELIPMM
Trigger: CATCATTGGTATCAGCTCCAACTTCTGTGTTGGCTC...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTGTCTCAGGCTCATCCTaGGGAACAGGTAGCCGGTTT +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSVSGSS*GTGSRF
Trigger: AAACCGGCTACCTGTTCCCAAGGATGAGCCTGAGAC...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGGGGCTGGCAACAGGTaGGGGCAAGGTACAGAAATC +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAGAGNR*GQGTEI
Trigger: GATTTCTGTACCTTGCCCCAACCTGTTGCCAGCCCC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTATGCGTTTGTCCGCATaGAACCGTTCCATCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFMRLSA*NRSIKA
Trigger: GGCCTTGATGGAACGGTTCAATGCGGACAAACGCAT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCGGAACACCTCCTCCTaGGCTTGGTCCAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSRNTSS*AWSRSF
Trigger: AAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCG...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGAGTCCAAGGGGAGGTaGGTAACCCCAGGAGAGATG +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGESKGR*VTPGEM
Trigger: CATCTCTCCTGGGGTTACCAACCTCCCCTTGGACTC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGGTAGCAGTGTGGTATaGGTCCCCTCCACAGGACCT +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAGSSVV*VPSTGP
Trigger: AGGTCCTGTGGAGGGGACCAATACCACACTGCTACC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGACAGTAGTGACAGTGTaGGTGACAGCAGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQTVVTV*VTAVGQ
Trigger: CTGTCCCACTGCTGTCACCAACACTGTCACTACTGT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp TACGACGAAAAGCCTGGTGATCTTGCAGTACCAGCTTGTAAGACGTaGTACACACATGGAAAGCATTGGGCTTGGTCCAGCCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: YDEKPGDLAVPACKT*YTHGKHWAWSSPAA
Trigger: AGCGGCAGGGCTGGACCAAGCCCAATGCTTTCCATGTGTGTATCACGTCTTACAAGCTGGTACTGCAAGATCACCAGGCTTTTCGTCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp CCTATGAGTCTCCAAAAGCTCATCAAGTGGTTCAGCAGATGCTGCTaGGGGTGGGAGCTCCAGCCCATTGCTCTCATTCAGACTCATGGT +
Preference number: 5 (lower is better)
Translates to: PMSLQKLIKWFSRCC*GWELQPIALIQTHG
Trigger: ACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTGAACCACTTGATGAGCTTTTGGAGACTCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp AGTTCTAACCCACTTGGCCCACTATCTGCTAAATCCAGGTCATCCTaGATTACGGCCATCACCATGGACCCTTCACTCTTTCGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSNPLGPLSAKSRSS*ITAITMDPSLFRPR
Trigger: GCGGGGACGAAAGAGTGAAGGGTCCATGGTGATGGCCGTAATTCAGGATGACCTGGATTTAGCAGATAGTGGGCCAAGTGGGTTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp GCTCCTCTCGGCTCACTTCCTCCAATGAAGCTTCTAGGAACTTCATaGCATAGCGCTCAATGGGAGTCAGCTGTTCTACTAGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: APLGSLPPMKLLGTS*HSAQWESAVLLGQQ
Trigger: TTGCTGCCCTAGTAGAACAGCTGACTCCCATTGAGCGCTATGCCATGAAGTTCCTAGAAGCTTCATTGGAGGAAGTGAGCCGAGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CACTATCTGCTAAATCCAGGTCATCCTGAATTACGGCCATCACCATaGACCCTTCACTCTTTCGTCCCCGCATCCCTTCAGCTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: HYLLNPGHPELRPSP*TLHSFVPASLQLQA
Trigger: GGCTTGAAGCTGAAGGGATGCGGGGACGAAAGAGTGAAGGGTCCATGGTGATGGCCGTAATTCAGGATGACCTGGATTTAGCAGATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAGCTTCATGTTTGGCTaGCTCTGCAATTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYSFMFG*LCNFCM
Trigger: CATGCAGAAATTGCAGAGCAAGCCAAACATGAAGCT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGTTCTTCCTCTTGGGGTaGAAAGTCCCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRFFLLG*KVPIFI
Trigger: GATGAAGATGGGGACTTTCAACCCCAAGAGGAAGAA...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGACTGCTACTGTCTTCTaGAGCTGCCTCTTCAACTGT +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRTATVF*SCLFNC
Trigger: ACAGTTGAAGAGGCAGCTCAAGAAGACAGTAGCAGT...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGCTCTGGCTGTTAAAGTaGAGCAGTGACTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQLWLLK*SSDCHR
Trigger: ACGATGGCAGTCACTGCTCAACTTTAACAGCCAGAG...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGTACGGCCTTCTTGCTaGGGCACTGGCTGCAGCATT +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARVRPSC*GTGCSI
Trigger: AATGCTGCAGCCAGTGCCCAAGCAAGAAGGCCGTAC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGGAGTGGGTGCTAAAGTaGGGGCTAGGGTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKEWVLK*GLGSMS
Trigger: AGACATTGACCCTAGCCCCAACTTTAGCACCCACTC...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTATGAGCCTCACTAAGTaGGAAAATCCGATCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFMSLTK*ENPIQA
Trigger: CGCCTGGATCGGATTTTCCAACTTAGTGAGGCTCAT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCTGTTCTTCTGCCTGTTaGAGCTCCTCTCGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SKTSSSGYQSQAWARESGCSSAC*SSSRLT
Trigger: AGTGAGCCGAGAGGAGCTCAAACAGGCAGAAGAACA...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAGTGTGGTTTGCTCCTaGAGTTTCTGCCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGSVVCS*SFCPSS
Trigger: GGAGCTCGGGCAGAAACTCAAGGAGCAAACCACACT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCGGGAGCTCCAGCCCATaGCTCTCATTCAGACTCATG +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQAGSSSP*LSFRLM
Trigger: CATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCC...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp AATCCACCAAGAGTGGGTGCTAAAGTTGGGGCTAGGGTCAATGTCTaGGTAGAAGCCAGGCTTGAGAGAGGTGATGAAACTGGGGTTGAC +
Preference number: 5 (lower is better)
Translates to: NPPRVGAKVGARVNV*VEARLERGDETGVD
Trigger: GTCAACCCCAGTTTCATCACCTCTCTCAAGCCTGGCTTCTACTCAGACATTGACCCTAGCCCCAACTTTAGCACCCACTCTTGGTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp AGTGTCTGCTCCTGTCAGGTTCACACCCACACCCCCACTTCGAGTTaGAAGGATGAAGCAGAATATGCGTTTGTCCGCATTGAACCGTTC +
Preference number: 5 (lower is better)
Translates to: SVCSCQVHTHTPTSS*KDEAEYAFVRIEPF
Trigger: GAACGGTTCAATGCGGACAAACGCATATTCTGCTTCATCCTTTCAACTCGAAGTGGGGGTGTGGGTGTGAACCTGACAGGAGCAGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CCACAAGGAGTCCTAAAACAATCACACAAGCACAATGAGGGAGGTGAGAGAATTGCAATTCGGCGCAGCTaGGCCTGTTCCTCTCTCCGA +
Preference number: 5 (lower is better)
Translates to: PQGVLKQSHKHNEGGERIAIRRS*ACSSLR
Trigger: TCGGAGAGAGGAACAGGCCAAGCTGCGCCGAATTGC...AATTCTCTCACCTCCCTCATTGTGCTTGTGTGATTGTTTTAGGACTCCTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTTCCTCTTCTTCCTCTaGGGGTTGAAAGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKFLFFL*GLKVPI
Trigger: GATGGGGACTTTCAACCCCAAGAGGAAGAAGAGGAA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGAAAAGCCTGGTGATCTaGCAGTACCAGCTTGTAAGA +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRKSLVI*QYQLVR
Trigger: TCTTACAAGCTGGTACTGCAAGATCACCAGGCTTTT...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCTGTTGACCTTCATCTaGACTGGCTTGGGACGAGGT +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQALLTFI*TGLGRG
Trigger: ACCTCGTCCCAAGCCAGTCAAGATGAAGGTCAACAG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGTTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQFVALD*EGERFA
Trigger: AGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAA...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTGTCAAAGTCAGTTTGTaGCCCTGGATTTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFVKVSL*PWIWKV
Trigger: CACCTTCCAAATCCAGGGCAACAAACTGACTTTGAC...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCGAGACAATGTTTGAGTaGGACCTACTGGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SKTSSSGYQSQAWARESGETMFE*DLLVLL
Trigger: CAGGAGGACCAGTAGGTCCAACTCAAACATTGTCTC...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTCCCTGGAGGCTTTTTAAGCAGAATATGCGTTaGTCCGCATTGAACCGTTCC +
Preference number: 5 (lower is better)
Translates to: PLLWWKGRQPPMSPWRLFKQNMR*SALNRS
Trigger: GGAACGGTTCAATGCGGACAAACGCATATTCTGCTT...AAAAAGCCTCCAGGGAGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTCTCACAGGGCTGCATaGGGGAGGCACAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRSHRAA*GRHKGV
Trigger: AACACCTTTGTGCCTCCCCAATGCAGCCCTGTGAGA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGTCTCAGCTTCCAGGGTaGAACTGGGTGCAGGAATAC +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGSQLPG*NWVQEY
Trigger: GTATTCCTGCACCCAGTTCAACCCTGGAAGCTGAGA...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp ATCAGAGCTATTGGCTTCAACTTCATCTTCATCTTCACTATCCCCTaGGGCTGGAGCAGAGGCATCACAGGCATAGGCCCCTGCATATTG +
Preference number: 5 (lower is better)
Translates to: IRAIGFNFIFIFTIP*GWSRGITGIGPCIL
Trigger: CAATATGCAGGGGCCTATGCCTGTGATGCCTCTGCTCCAGCCTCAGGGGATAGTGAAGATGAAGATGAAGTTGAAGCCAATAGCTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAGCTTCATGTTTGGCTaGCTCTGCAATTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASFMFG*LCNFCM
Trigger: CATGCAGAAATTGCAGAGCAAGCCAAACATGAAGCT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp TTGCTCCAGAACTGCCTAACATCCTTGGCCATGGTAGAAGCAATTCGGCGCAGCAGCTTCATGTTTGGCTaGCTCTGCAATTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LLQNCLTSLAMVEAIRRSSFMFG*LCNFCM
Trigger: CATGCAGAAATTGCAGAGCAAGCCAAACATGAAGCT...GCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098025.11
CDS-3UTR CAA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYISSLLL*SLLFMV
Trigger: CACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp AAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: KVPYIGTCHKELELQRLVSSLLL*SLLFMV
Trigger: CACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCT...AACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CAA 90 bp GTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCCATGGTGGGATACAGACTGTTGTTTGAATaGTACCACCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: VVVIRVRPGQGKAAMVGYRLLFE*YHLLHI
Trigger: AATGTGGAGAAGGTGGTACAATTCAAACAACAGTCT...GTATCCCACCATGGCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCGGATGCCAACGCTGCTaGTTACATTGTGTGACAGCG +
Preference number: 5 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTGCQRC*LHCVTA
Trigger: CGCTGTCACACAATGTAACAAGCAGCGTTGGCATCC...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGGGATGCCAACGCTGCTaGTTACATTGTGTGACAGCG +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRGCQRC*LHCVTA
Trigger: CGCTGTCACACAATGTAACAAGCAGCGTTGGCATCC...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGACTGCTACTGTCTTCTaGAGCTGCCTCTTCAACTGT +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKTATVF*SCLFNC
Trigger: ACAGTTGAAGAGGCAGCTCAAGAAGACAGTAGCAGT...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTTCAGTAATTTCTTTCTaGGGCCCTAGAGTGGTCGTA +
Preference number: 5 (lower is better)
Translates to: DPPASAGIKGVYLYHWPASVISF*GPRVVV
Trigger: TACGACCACTCTAGGGCCCAAGAAAGAAATTACTGA...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGAAAGGTCGCAGAACCTaGTGGAGGCGTTTGACTAGA +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGKGRRT*WRRLTR
Trigger: TCTAGTCAAACGCCTCCACAAGGTTCTGCGACCTTT...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGATCATAGAGACAGCGTaGCCGCTTGGAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWIIETA*PLGKSA
Trigger: TGCCGACTTTCCAAGCGGCAACGCTGTCTCTATGAT...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTTCATCCCCAAATATACAATGGATATTTGCCGCTAAAACAGACTGCTGGGCACGCAGGAGACACAGGATaGCTGCCTGTCATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FHPQIYNGYLPLKQTAGHAGDTG*LPVMPS
Trigger: GGACGGCATGACAGGCAGCAATCCTGTGTCTCCTGC...GTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGGCTGCAGCATTCTGTaGACCTTCATCTTGACTGGC +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARGCSIL*TFILTG
Trigger: GCCAGTCAAGATGAAGGTCAACAGAATGCTGCAGCC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGTTCACCACGCCTGTATaGTTCACCATGGATGGTGGC +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRFTTPV*FTMDGG
Trigger: GCCACCATCCATGGTGAACAATACAGGCGTGGTGAA...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGATGACAATGTCTGAATaGGAAAGGGCCCCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRMTMSE*ERAPEG
Trigger: GCCCTCAGGGGCCCTTTCCAATTCAGACATTGTCAT...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGTCGGGCAGCTTCCACTaGTTCTTCTGCCTGTTTGAG +
Preference number: 5 (lower is better)
Translates to: WRLFPSKTSSSGYQSQAWSGSFH*FFCLFE
Trigger: CTCAAACAGGCAGAAGAACAAGTGGAAGCTGCCCGA...CCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS GCA 90 bp TTCTCCCTCATGTCGAAGAAGTTCAATCTCACGCCTCTGGGTCTCTaGATCATTGCCTTCCTGTTGTTCTTCAACCTCAATGGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: FSLMSKKFNLTPLGL*IIAFLLFFNLNGLL
Trigger: GAGGAGACCATTGAGGTTGAAGAACAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGAACTTCTTCGACATGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp AAGGTCCCCTACATAGGGACATGTCATAAAGAGCTGGAACTGCAGCGTTTAGTTTCTGTGTCTGTAGGATaGGGAGCTGAGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: KVPYIGTCHKELELQRLVSVSVG*GAEDEQ
Trigger: CTGCTCATCCTCAGCTCCCAATCCTACAGACACAGA...AACTAAACGCTGCAGTTCCAGCTCTTTATGACATGTCCCTATGTAGGGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CAA 90 bp CTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGACCACCTTCTCCACATaGCTCCAGAACTGCCTAACA +
Preference number: 5 (lower is better)
Translates to: LPGGFFPQRLQVVVIRVRTTFST*LQNCLT
Trigger: TGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGT...CCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTTCAGTAATTTCTTTCTaGGGCCCTAGAGTGGTCGTA +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSSVISF*GPRVVV
Trigger: TACGACCACTCTAGGGCCCAAGAAAGAAATTACTGA...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CAAGTACAAGGGGGTGGGGACAGAAACTATCTTGCCACCCTTAACACTGCCCAGACCTTGTGGAGGCGTTaGACTAGACCTTCATTATAT +
Preference number: 5 (lower is better)
Translates to: QVQGGGDRNYLATLNTAQTLWRR*TRPSLY
Trigger: ATATAATGAAGGTCTAGTCAAACGCCTCCACAAGGT...CTGGGCAGTGTTAAGGGTGGCAAGATAGTTTCTGTCCCCACCCCCTTGTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAAAAATACCAAAGGTCGCAGAACCTaGTGGAGGCGTTTGACTAGA +
Preference number: 5 (lower is better)
Translates to: ASAGIKGVYLYHWPAKNTKGRRT*WRRLTR
Trigger: TCTAGTCAAACGCCTCCACAAGGTTCTGCGACCTTT...GGTATTTTTAGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCCTCCAAAATATGAGTTaGTTTGCTGGCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQALQNMS*FAGHSL
Trigger: GAGGCTGTGGCCAGCAAACAAACTCATATTTTGGAG...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp CTTCATCATCTTCATCTGGATGCCAACGCTGCTTGTTACATTGTGTaGCAGCGGAAGATGGAGGGTGTACCTCTAAATCCTGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LHHLHLDANAACYIV*QRKMEGVPLNPEMA
Trigger: AGCCATCTCAGGATTTAGAGGTACACCCTCCATCTTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTTCTGTGTCTGTAGGATaGGGAGCTGAGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSSVSVG*GAEDEQ
Trigger: CTGCTCATCCTCAGCTCCCAATCCTACAGACACAGA...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GATCCACCTGCCTCTGCTGGCATTAAAGGTGTATACCTCTACCACTGGCCAGCTAGACTGTTGTTTGAATaGTACCACCTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: DPPASAGIKGVYLYHWPARLLFE*YHLLHI
Trigger: AATGTGGAGAAGGTGGTACAATTCAAACAACAGTCT...AGCTGGCCAGTGGTAGAGGTATACACCTTTAATGCCAGCAGAGGCAGGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTTCTTCCTCTTGGGGTaGAAAGTCCCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARFFLLG*KVPIFI
Trigger: GATGAAGATGGGGACTTTCAACCCCAAGAGGAAGAA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAAAGCGGCATCATTGCCTTCCTGTaGTTCTTCAACCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: SKTSSSGYQSQAWARESGIIAFL*FFNLNG
Trigger: ACCATTGAGGTTGAAGAACAACAGGAAGGCAATGAT...GCCGCTTTCCCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGTGGGTCTCTGCATCATaGCCTTCCTGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARWVSAS*PSCCSS
Trigger: TGAAGAACAACAGGAAGGCAATGATGCAGAGACCCA...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAGTCAAGGCCAATGTGTaGGTACTCTCGGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKVKANV*VLSELA
Trigger: GGCCAGCTCCGAGAGTACCAACACATTGGCCTTGAC...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CAACCAGTAACCTACCCCCTACTTTGGTGGAAAGGAAGACAGCCCCCTATGTCTACATGCTCATACTTTTaGGGCATCTGCTTCTCAACA +
Preference number: 5 (lower is better)
Translates to: QPVTYPLLWWKGRQPPMSTCSYF*GICFST
Trigger: TGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGT...AGACATAGGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp AAGAGCCAGGTCTGGAGGTGCATGCATTTGATCTCAGTAGTGGAGGGGCAGAGGAACTGCATCAGAATGTaGATGACACTCATAAAATGG +
Preference number: 5 (lower is better)
Translates to: KSQVWRCMHLISVVEGQRNCIRM*MTLIKW
Trigger: CCATTTTATGAGTGTCATCAACATTCTGATGCAGTT...CCTCTGCCCCTCCACTACTGAGATCAAATGCATGCACCTCCAGACCTGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTACTAGTCACTGGACGTaGTGCCAAGGAAGCCAACTG +
Preference number: 5 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSTSHWT*CQGSQL
Trigger: CAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGT...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGGAGAGGAATTGTGAATaGTCATCGGAGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARERNCE*SSEKRL
Trigger: CAGCCTCTTCTCCGATGACAATTCACAATTCCTCTC...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGAATGGTTACTGGATTaGGGGCTGAAATGGGTATTG +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGEWLLD*GLKWVL
Trigger: CAATACCCATTTCAGCCCCAAATCCAGTAACCATTC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp TTGCCACCCTTAACACTGCCCAGCCATATAGGAGAGAAAGGGGGTTGTGACAAGTTTCTGAGTTGGAAATaGGGATCTGAACCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPPLTLPSHIGEKGGCDKFLSWK*GSEPLL
Trigger: CAAGAGAGGTTCAGATCCCAATTTCCAACTCAGAAA...CTTGTCACAACCCCCTTTCTCTCCTATATGGCTGGGCAGTGTTAAGGGTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTCAGTTCTAACCCACTaGGCCCACTATCTGCTAAAT +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQASVLTH*AHYLLN
Trigger: ATTTAGCAGATAGTGGGCCAAGTGGGTTAGAACTGA...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp GGCTCTGAGACAGAAGGTCTGAGTACTTCTCAGTTTGCCCTACAATaGAGTCCAGGTGCAGGTCCAAGGCTTTCTTACGTTTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: GSETEGLSTSQFALQ*SPGAGPRLSYVFLQ
Trigger: TTGAAGAAAAACGTAAGAAAGCCTTGGACCTGCACCTGGACTTCATTGTAGGGCAAACTGAGAAGTACTCAGACCTTCTGTCTCAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 90 bp TTACATTGTGTGACAGCGGAAGATGGAGGGTGTACCTCTAAATCCTaGGATGGCTCCTCTTCAATATTTTCTTCAGGCCCATCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LHCVTAEDGGCTSKS*DGSSSIFSSGPSWV
Trigger: TACCCAGGATGGGCCTGAAGAAAATATTGAAGAGGAGCCATCTCAGGATTTAGAGGTACACCCTCCATCTTCCGCTGTCACACAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 90 bp GTTTCAATTCCATCTCCCAATTCAACATCACGCTGGTCGGAACAATaGTTAAATGGGGACCCCAGTTACCTTTCTCACAGGCCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: VSIPSPNSTSRWSEQ*LNGDPSYLSHRPSE
Trigger: CTCACTTGGCCTGTGAGAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCCGACCAGCGTGATGTTGAATTGGGAGATGGAATTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp AGAAGGTCTGAGTACTTCTCAGTTTGCCCTACAATGAAGTCCAGGTaGAGGTCCAAGGCTTTCTTACGTTTTTCTTCAAGCCGAGACTGT +
Preference number: 5 (lower is better)
Translates to: RRSEYFSVCPTMKSR*RSKAFLRFSSSRDC
Trigger: ACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGCCTTGGACCTGCACCTGGACTTCATTGTAGGGCAAACTGAGAAGTACTCAGACCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp CTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGCAAGGAAAAGCCTGGTGATCTaGCAGTACCAGCTTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LFPSKTSSSGYQSQAWARKSLVI*QYQLVR
Trigger: TCTTACAAGCTGGTACTGCAAGATCACCAGGCTTTT...CCTTGCCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCTGGGGAGGGTCAAATAGATTaGGATGATTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: GGFFPQRLQVVVIRVRPGEGQID*DDCRLS
Trigger: GGAAAGTCTGCAATCATCCAAATCTATTTGACCCTC...CCCAGGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp ATGTCTCCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTACACCAGAGTTTGAGTaGATGAGGGAGCCAACACAG +
Preference number: 5 (lower is better)
Translates to: MSPWRLFPSKTSSSGYQSTPEFE*MREPTQ
Trigger: CTGTGTTGGCTCCCTCATCAACTCAAACTCTGGTGT...ACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGGAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 90 bp TGCAACTTTCCACAATCATACTGGATGAGTCTCAAGTCAGGGAACTaGGTACGCATATTACATACAATACGGTGCAAAGGACGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: CNFPQSYWMSLKSGN*VRILHTIRCKGRAR
Trigger: TCGAGCCCGTCCTTTGCACCGTATTGTATGTAATATGCGTACTCAGTTCCCTGACTTGAGACTCATCCAGTATGATTGTGGAAAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp TTCTCATTAAATTCTGCAAGCTCAGCCACTTGTTCAGCTTTGGCCTaGGTGGCTGCACGGATATCTTCTTCATCTTCTGCCCGACATAAT +
Preference number: 5 (lower is better)
Translates to: FSLNSASSATCSALA*VAARISSSSSARHN
Trigger: ATTATGTCGGGCAGAAGATGAAGAAGATATCCGTGCAGCCACTCAGGCCAAAGCTGAACAAGTGGCTGAGCTTGCAGAATTTAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 90 bp TCATTAGCAGTAAACTCTTCATCATCTTCATCTGGATGCCAACGCTaGTTGTTACATTGTGTGACAGCGGAAGATGGAGGGTGTACCTCT +
Preference number: 5 (lower is better)
Translates to: SLAVNSSSSSSGCQR*LLHCVTAEDGGCTS
Trigger: AGAGGTACACCCTCCATCTTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CCA 90 bp CGCAGAACCTTGTGGAGGCGTTTGACTAGACCTTCATTATATTCTTaGCTTCCTTCAATCATGCCAGTTAGAGGGTTAGAAAACCACTCC +
Preference number: 5 (lower is better)
Translates to: RRTLWRRLTRPSLYS*LPSIMPVRGLENHS
Trigger: GGAGTGGTTTTCTAACCCTCTAACTGGCATGATTGAAGGAAGCCAAGAATATAATGAAGGTCTAGTCAAACGCCTCCACAAGGTTCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 90 bp TTGAGCAGTGACTGCCATCGTTGGGACTTGAAATTCTTGATGTTCTaGGCCTCATCCAGAATAAGATACCGCCAGTTCTTACGACGAAAA +
Preference number: 5 (lower is better)
Translates to: LSSDCHRWDLKFLMF*ASSRIRYRQFLRRK
Trigger: TTTTCGTCGTAAGAACTGGCGGTATCTTATTCTGGATGAGGCTCAGAACATCAAGAATTTCAAGTCCCAACGATGGCAGTCACTGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 90 bp CAGACTTTCCGCAACTGCATCAGAATGTTGATGACACTCATAAAATaGCCTGTAGCTAGTGTCTCCTTAGTTGTAGTCTGTGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: QTFRNCIRMLMTLIK*PVASVSLVVVCAMK
Trigger: CTTCATGGCACAGACTACAACTAAGGAGACACTAGCTACAGGCCATTTTATGAGTGTCATCAACATTCTGATGCAGTTGCGGAAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS-3UTR CAA 90 bp TCCCCAAATATACAATGGATATTTGCCGCTAAAACAGACTGCTGGGCACTGTTCAGCTTCATGTTTGGCTaGCTCTGCAATTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: SPNIQWIFAAKTDCWALFSFMFG*LCNFCM
Trigger: CATGCAGAAATTGCAGAGCAAGCCAAACATGAAGCT...GAACAGTGCCCAGCAGTCTGTTTTAGCGGCAAATATCCATTGTATATTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS-3UTR CAA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAATTCCTCTTCTTCCTCTaGGGGTTGAAAGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKFLFFL*GLKVPI
Trigger: GATGGGGACTTTCAACCCCAAGAGGAAGAAGAGGAA...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAATCATTGCCTTCCTGTaGTTCTTCAACCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIIIAFL*FFNLNG
Trigger: ACCATTGAGGTTGAAGAACAACAGGAAGGCAATGAT...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CCCTGGAGGCTTTTTCCCTCAAAGACTTCAAGTAGTGGTTATCAGAGTCAGGCCAACTGCATCAGAATGTaGATGACACTCATAAAATGG +
Preference number: 5 (lower is better)
Translates to: PWRLFPSKTSSSGYQSQANCIRM*MTLIKW
Trigger: CCATTTTATGAGTGTCATCAACATTCTGATGCAGTT...GGCCTGACTCTGATAACCACTACTTGAAGTCTTTGAGGGAAAAAGCCTCCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS-3UTR CAA 90 bp GAGGGGCAGAGGCAGGGAAATCTCTCTAAGTTTGATGACAGAGTGGTCTATATAGAGGGTCAAATAGATTaGGATGATTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: EGQRQGNLSKFDDRVVYIEGQID*DDCRLS
Trigger: GGAAAGTCTGCAATCATCCAAATCTATTTGACCCTC...TATATAGACCACTCTGTCATCAAACTTAGAGAGATTTCCCTGCCTCTGCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAATGGGTCTCTGCATCATaGCCTTCCTGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKWVSAS*PSCCSS
Trigger: TGAAGAACAACAGGAAGGCAATGATGCAGAGACCCA...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp TTCTTCAAAACAGGTTTTCTCTGTGTAGCTCCTGATGTCCTGAAACTCATGCTGACATGCTCATACTTTTaGGGCATCTGCTTCTCAACA +
Preference number: 5 (lower is better)
Translates to: FFKTGFLCVAPDVLKLMLTCSYF*GICFST
Trigger: TGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGT...CAGCATGAGTTTCAGGACATCAGGAGCTACACAGAGAAAACCTGTTTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS-3UTR CAA 90 bp CTGAGGATGGATGGTAGAGATGACTTACAACACAAATATCCTGAGGTCACTAAAACCTTGTGGAGGCGTTaGACTAGACCTTCATTATAT +
Preference number: 5 (lower is better)
Translates to: LRMDGRDDLQHKYPEVTKTLWRR*TRPSLY
Trigger: ATATAATGAAGGTCTAGTCAAACGCCTCCACAAGGT...TTTAGTGACCTCAGGATATTTGTGTTGTAAGTCATCTCTACCATCCATCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066582.12
CDS GCA 72 bp ACCAGGTGCACCACATTCCTTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGCACCTGGGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: TRCTTFLCSGRG*PTASWRTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAATGTGGTGCACCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS GCA 72 bp TTCACCATGGATGGTGGCATTTGCAGCGGGCGGGGCTaGCCCACAGCAAGCTGGCGCACCTGGGCACCAGTC +
Preference number: 6 (lower is better)
Translates to: FTMDGGICSGRG*PTASWRTWAPV
Trigger: GACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCCACCATCCATGGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 72 bp AGGGGGACGGACTGGGACAGGGCCAAGGGGAGGCCGTaGGCTGTTCACCACCACCACTGTACGGCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RGTDWDRAKGRP*AVHHHHCTAFL
Trigger: CAAGAAGGCCGTACAGTGGTGGTGGTGAACAGCCCACGGCCTCCCCTTGGCCCTGTCCCAGTCCGTCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp ACAGGGTTGGTGTGGGAGGCCGTGAGGTCCCACTCATaGCTCCCACGGGGGATGGCAACACCTGGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: TGLVWEAVRSHS*LPRGMATPGGE
Trigger: CTCTCCCCCAGGTGTTGCCATCCCCCGTGGGAGTCATGAGTGGGACCTCACGGCCTCCCACACCAACCCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GGCAGGCTGGCTGATGAGGTGGTGCTGACCCCCTGCTaGCACCAGGTGCACCACATTCCTTTGCAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GRLADEVVLTPC*HQVHHIPLQRA
Trigger: CGCCCGCTGCAAAGGAATGTGGTGCACCTGGTGTCAGCAGGGGGTCAGCACCACCTCATCAGCCAGCCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CCA 72 bp AGCGGGCGGGGCTGCCCCACAGCAAGCTGGCGCACCTaGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATT +
Preference number: 6 (lower is better)
Translates to: SGRGCPTASWRT*APVKVSLLPWI
Trigger: AATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GGCATTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTG +
Preference number: 6 (lower is better)
Translates to: GICSGRGCPTAS*RTWAPVKVSLL
Trigger: CAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 72 bp CACTACTACGCAGGATACGCTGGTCCCCTTGGTTGGTaGTCCCAACGAGCCTGCGGGGACCAGTTCGACGGC +
Preference number: 6 (lower is better)
Translates to: HYYAGYAGPLGW*SQRACGDQFDG
Trigger: GCCGTCGAACTGGTCCCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GGGAGGAGCACTACTACGCAGGATACGCTGGTCCCCTaGGTTGGTGGTCCCAACGAGCCTGCGGGGACCAGT +
Preference number: 6 (lower is better)
Translates to: GRSTTTQDTLVP*VGGPNEPAGTS
Trigger: ACTGGTCCCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTGCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCGGGTGCTGAAGCACTGACTTCAGGCGAAGGACTGTGGACCAGCTaGAGGAGGGGCCTCACCAGAGTGGGTGTGGGTATGGGGGTACGA +
Preference number: 6 (lower is better)
Translates to: PGAEALTSGEGLWTS*RRGLTRVGVGMGVR
Trigger: TCGTACCCCCATACCCACACCCACTCTGGTGAGGCCCCTCCTCAAGCTGGTCCACAGTCCTTCGCCTGAAGTCAGTGCTTCAGCACCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp AGGGCCACATGGGCAGGCTGGCTGATGAGGTGGTGCTaGCCCCCTGCTGACACCAGGTGCACCACATTCCTT +
Preference number: 6 (lower is better)
Translates to: RATWAGWLMRWC*PPADTRCTTFL
Trigger: AAGGAATGTGGTGCACCTGGTGTCAGCAGGGGGTCAGCACCACCTCATCAGCCAGCCTGCCCATGTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CCA 72 bp CCGGGTGCTGAAGCACTGACTTCAGGCGAAGGACTGTaGACCAGCTTGAGGAGGGGCCTCACCAGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: PGAEALTSGEGL*TSLRRGLTRVG
Trigger: ACCCACTCTGGTGAGGCCCCTCCTCAAGCTGGTCCACAGTCCTTCGCCTGAAGTCAGTGCTTCAGCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GAGCACTACTACGCAGGATACGCTGGTCCCCTTGGTTaGTGGTCCCAACGAGCCTGCGGGGACCAGTTCGAC +
Preference number: 6 (lower is better)
Translates to: EHYYAGYAGPLG*WSQRACGDQFD
Trigger: GTCGAACTGGTCCCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GGAGGAGCACTACTACGCAGGATACGCTGGTCCCCTTaGTTGGTGGTCCCAACGAGCCTGCGGGGACCAGTT +
Preference number: 6 (lower is better)
Translates to: GGALLRRIRWSP*LVVPTSLRGPV
Trigger: AACTGGTCCCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTGCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CATAGGTGGGGAGGAGCACTACTACGCAGGATACGCTaGTCCCCTTGGTTGGTGGTCCCAACGAGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: HRWGGALLRRIR*SPWLVVPTSLR
Trigger: CCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTGCTCCTCCCCACCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp TTCCTTTGCAGCGGGCGGGGCTGCCCCACAGCAAGCTaGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTG +
Preference number: 6 (lower is better)
Translates to: FLCSGRGCPTAS*RTWAPVKVSLL
Trigger: CAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCAGCCCCGCCCGCTGCAAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CAA 72 bp GGAGCACTACTACGCAGGATACGCTGGTCCCCTTGGTaGGTGGTCCCAACGAGCCTGCGGGGACCAGTTCGA +
Preference number: 6 (lower is better)
Translates to: GALLRRIRWSPW*VVPTSLRGPVR
Trigger: TCGAACTGGTCCCCGCAGGCTCGTTGGGACCACCAACCAAGGGGACCAGCGTATCCTGCGTAGTAGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp TCCCTTCAGCTTCAAGCCGAAGACGGGCCAGGCGGGTaGGAGGACGGCTTCCATCCTCATCAGAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: SLQLQAEDGPGG*EDGFHPHQRNC
Trigger: GCAGTTCCTCTGATGAGGATGGAAGCCGTCCTCTCACCCGCCTGGCCCGTCTTCGGCTTGAAGCTGAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CTCCGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATaGTGCCGGATCACCATACGTACCACCTTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LRARSSFCRCSS*CRITIRTTFRA
Trigger: GGCCCGGAAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CCA 72 bp CCTCCACAGGACCTGGCACCTCCTGCTGCTGACCATTaGGGATGCTCTCAGCTTCCAGGGTTGAACTGGGTG +
Preference number: 6 (lower is better)
Translates to: PPQDLAPPAADH*GCSQLPGLNWV
Trigger: CACCCAGTTCAACCCTGGAAGCTGAGAGCATCCCCAATGGTCAGCAGCAGGAGGTGCCAGGTCCTGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CCCCTCTCCCAGCATCTGCTGGAGATCTGTTCTTCTTaGGAGGCCTCCCCCTCCGACGTTTCACAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PLSQHLLEICSS*EASPSDVSQQV
Trigger: CACCTGCTGTGAAACGTCGGAGGGGGAGGCCTCCCAAGAAGAACAGATCTCCAGCAGATGCTGGGAGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GTCCCACTCATGACTCCCACGGGGGATGGCAACACCTaGGGGAGAGGACCAGTATTTGGCTGCAAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: VPLMTPTGDGNT*GRGPVFGCKGD
Trigger: GTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGTGTTGCCATCCCCCGTGGGAGTCATGAGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCATCACGAGGGGCCTGTCTCACTACAATCTTCACCACGCCTGTATaGTTCACCATGGATGGTGGCATTTGCAGCGGGCGGGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PSRGACLTTIFTTPV*FTMDGGICSGRGCP
Trigger: GGGGCAGCCCCGCCCGCTGCAAATGCCACCATCCATGGTGAACAATACAGGCGTGGTGAAGATTGTAGTGAGACAGGCCCCTCGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CAA 90 bp GGGCTGGGAGGACCAGAGCGCAGAGTCAGTGTCTCAGGCTCATCCTaGGGAACAGGTAGCCGGTTTACCATGGTGACAGGCAAGGAAGCG +
Preference number: 6 (lower is better)
Translates to: GLGGPERRVSVSGSS*GTGSRFTMVTGKEA
Trigger: CGCTTCCTTGCCTGTCACCATGGTAAACCGGCTACCTGTTCCCAAGGATGAGCCTGAGACACTGACTCTGCGCTCTGGTCCTCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp TGGCCGAGATGCAGGAACAACTGGTGTTCCGGCAGGTaGAGCCGACACCATGAGTGGTGCTGGCAACACTGG +
Preference number: 6 (lower is better)
Translates to: WPRCRNNWCSGR*SRHHEWCWQHW
Trigger: CCAGTGTTGCCAGCACCACTCATGGTGTCGGCTTCACCTGCCGGAACACCAGTTGTTCCTGCATCTCGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GAGGCCTCCCCCTCCGACGTTTCACAGCAGGTGGAGTaGTGGCAAGCTCTGTTCCTTCTCCATTCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: EASPSDVSQQVE*WQALFLLHSLG
Trigger: GCCCAGAGAATGGAGAAGGAACAGAGCTTGCCATCACTCCACCTGCTGTGAAACGTCGGAGGGGGAGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CGAGCTCGCTCCTCCTTTTGTCGCTGCTCTTCATGGTaGCGGATCACCATACGTACCACCTTCCGGGCCACA +
Preference number: 6 (lower is better)
Translates to: RARSSFCRCSSW*RITIRTTFRAT
Trigger: TGTGGCCCGGAAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS GCA 72 bp GGGCCCAGGAACAAATTGGGGCCTGAGGTCAGGTTCTaGAACAGTTACTGTTTCAGGGCCGGGGACTGGGTC +
Preference number: 6 (lower is better)
Translates to: GPRNKLGPEVRF*NSYCFRAGDWV
Trigger: GACCCAGTCCCCGGCCCTGAAACAGTAACTGTTGCAGAACCTGACCTCAGGCCCCAATTTGTTCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp AGCATTCGGGTCATCTGGGTAAAAATGAGCACCCGGTaGCCCTCCGCCTTGAGCTGCCGTAACAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: SIRVIWVKMSTR*PSALSCRNSTA
Trigger: GGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGATGACCCGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp AGCAGGAGGAGGAGGAGGAGGACGAGGCCTAGGCACTaGCCTGGGAATTCTTTCTCTCACAGGGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: SRRRRRRTRPRH*PGNSFSHRAAL
Trigger: CAATGCAGCCCTGTGAGAGAAAGAATTCCCAGGCCAGTGCCTAGGCCTCGTCCTCCTCCTCCTCCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GCCCACGCCGTCTTTTCTCCACAGGCGATAGGATGGTaGGTTCTGGTCTGTGAACTGGTTGGGGTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: AHAVFSPQAIGW*VLVCELVGVQE
Trigger: CTCCTGGACCCCAACCAGTTCACAGACCAGAACCCACCATCCTATCGCCTGTGGAGAAAAGACGGCGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GACGCCCACGCCGTCTTTTCTCCACAGGCGATAGGATaGTGGGTTCTGGTCTGTGAACTGGTTGGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: DAHAVFSPQAIG*WVLVCELVGVQ
Trigger: CTGGACCCCAACCAGTTCACAGACCAGAACCCACCATCCTATCGCCTGTGGAGAAAAGACGGCGTGGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ACACGAGTCCCCAGCCTCTCAGGAGCCCTGATTTTCTaGCTGCGCCGGTGGCTGGCTCCACTACTTCCACAA +
Preference number: 6 (lower is better)
Translates to: TRVPSLSGALIF*LRRWLAPLLPQ
Trigger: TTGTGGAAGTAGTGGAGCCAGCCACCGGCGCAGCAAGAAAATCAGGGCTCCTGAGAGGCTGGGGACTCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ACCCCTCTCCCAGCATCTGCTGGAGATCTGTTCTTCTaGGGAGGCCTCCCCCTCCGACGTTTCACAGCAGGT +
Preference number: 6 (lower is better)
Translates to: TPLPASAGDLFF*GGLPLRRFTAG
Trigger: ACCTGCTGTGAAACGTCGGAGGGGGAGGCCTCCCAAGAAGAACAGATCTCCAGCAGATGCTGGGAGAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp TCGGCGCAGCTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTGCCGGATCACCATACGTACCACCTT +
Preference number: 6 (lower is better)
Translates to: SAQLGLFLSPSSLLL*SLLFMVPDHHTYHL
Trigger: AAGGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAGCTGCGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CAA 90 bp TGCCCCACAGCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGTTaGTTGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: CPTASWRTWAPVKVS*LPWIWKVRGLLPPA
Trigger: TGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CGTTCACTGACACGAGTCCCCAGCCTCTCAGGAGCCCTGATTTTCTaGCTGCGCCGGTGGCTGGCTCCACTACTTCCACAAGACATCTCA +
Preference number: 6 (lower is better)
Translates to: RSLTRVPSLSGALIF*LRRWLAPLLPQDIS
Trigger: TGAGATGTCTTGTGGAAGTAGTGGAGCCAGCCACCGGCGCAGCAAGAAAATCAGGGCTCCTGAGAGGCTGGGGACTCGTGTCAGTGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp ACCTCATCTACCCCTCTCCCAGCATCTGCTGGAGATCTGTTCTTCTaGGGAGGCCTCCCCCTCCGACGTTTCACAGCAGGTGGAGTGATG +
Preference number: 6 (lower is better)
Translates to: TSSTPLPASAGDLFF*GGLPLRRFTAGGVM
Trigger: CATCACTCCACCTGCTGTGAAACGTCGGAGGGGGAGGCCTCCCAAGAAGAACAGATCTCCAGCAGATGCTGGGAGAGGGGTAGATGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp GTCAGGGGTGCTGGGAAAGGGAGCGACTGTGTTCGGCTCTCTAAATaGCCGCCTCCTGGAGAGGATATGGTCCCAGGAATGGGCAAATCC +
Preference number: 6 (lower is better)
Translates to: VRGAGKGSDCVRLSK*PPPGEDMVPGMGKS
Trigger: GGATTTGCCCATTCCTGGGACCATATCCTCTCCAGGAGGCGGCAATTTAGAGAGCCGAACACAGTCGCTCCCTTTCCCAGCACCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CTGTCATGCCGTCCGACACCATCTGTGTCTGTAGGATaGGGAGCTGAGGATGAGCAGTGGAGGGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LSCRPTPSVSVG*GAEDEQWRGCS
Trigger: AGAGCAGCCCCTCCACTGCTCATCCTCAGCTCCCAATCCTACAGACACAGATGGTGTCGGACGGCATGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066582.12
ENSMUST00000098025.11
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CAA 72 bp CTTGGCCTGTTCCTCTCTCCGAGCTCGCTCCTCCTTTaGTCGCTGCTCTTCATGGTGCCGGATCACCATACG +
Preference number: 6 (lower is better)
Translates to: LGLFLSPSSLLL*SLLFMVPDHHT
Trigger: CGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CAA 72 bp GGACCAGAGCGCAGAGTCAGTGTCTCAGGCTCATCCTaGGGAACAGGTAGCCGGTTTACCATGGTGACAGGC +
Preference number: 6 (lower is better)
Translates to: GPERRVSVSGSS*GTGSRFTMVTG
Trigger: GCCTGTCACCATGGTAAACCGGCTACCTGTTCCCAAGGATGAGCCTGAGACACTGACTCTGCGCTCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TCCTCTTCCTCGTGGGGTAGTCGGAACACCTCCTCCTaGGCTTGGTCCAGGTCTTTTCGGGCAGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: SSSSWGSRNTSS*AWSRSFRAAST
Trigger: AGTGGAAGCTGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGACTACCCCACGAGGAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CTGGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTGGACG +
Preference number: 6 (lower is better)
Translates to: LAHLGTSQSQFVALD*EGERFASPSTSHWT
Trigger: CGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCCACAGCAAGCTGGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTaGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCCCCAGCACTA +
Preference number: 6 (lower is better)
Translates to: PTASWRTWAPVKVSL*PWIWKVRGLLPPAL
Trigger: TAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCTTGCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp TTCAGTCCCATACACGGGTGCCAGAGCCCCATGAGCCTCACTAAGTaGGAAAATCCGATCCAGGCGCTCAGATCGCTGCTGCTTCCGCTT +
Preference number: 6 (lower is better)
Translates to: FSPIHGCQSPMSLTK*ENPIQALRSLLLPL
Trigger: AAGCGGAAGCAGCAGCGATCTGAGCGCCTGGATCGGATTTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACCCGTGTATGGGACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCTGGTCCTTCCTCTTCCTCGTGGGGTAGTCGGAACACCTCCTCCTaGGCTTGGTCCAGGTCTTTTCGGGCAGCTTCCACTTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PGPSSSSWGSRNTSS*AWSRSFRAASTCSS
Trigger: AGAAGAACAAGTGGAAGCTGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGACTACCCCACGAGGAAGAGGAAGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CTGGACGTTGTGCCAAGGAAGCCAACTGTCCAATGCTaGCCACTTCTCCAGCCTGGGGGAGAGGACCAGTAT +
Preference number: 6 (lower is better)
Translates to: LDVVPRKPTVQC*PLLQPGGEDQY
Trigger: ATACTGGTCCTCTCCCCCAGGCTGGAGAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186954.5
CDS TCA 72 bp AGGACTTCAGTCCCATACACGGGTGCCAGAGCCCCATaGGCCTCACTAAGTTGGAAAATCCGATCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: RTSVPYTGARAP*ASLSWKIRSRR
Trigger: GCGCCTGGATCGGATTTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACCCGTGTATGGGACTGAAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CAGCAACAGGAGATAAAGTGTAGCCTGGTGGCACTGTaGGGGGCTTCAAGAGGCTGGAGGAACCTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: QQQEIKCSLVAL*GASRGWRNLEV
Trigger: CACCTCCAGGTTCCTCCAGCCTCTTGAAGCCCCTCACAGTGCCACCAGGCTACACTTTATCTCCTGTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp TACGTACCACCTTCCGGGCCACACCTCGTTTCCATCTaGGTTCCTGAGCAAAGTCAGCAGAGAGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: YVPPSGPHLVSI*VPEQSQQRATA
Trigger: TGCAGTGGCTCTCTGCTGACTTTGCTCAGGAACGCAGATGGAAACGAGGTGTGGCCCGGAAGGTGGTACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066582.12
ENSMUST00000098025.11
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS GCA 72 bp TGTTCCTCTCTCCGAGCTCGCTCCTCCTTTTGTCGCTaGTCTTCATGGTGCCGGATCACCATACGTACCACC +
Preference number: 6 (lower is better)
Translates to: CSSLRARSSFCR*SSWCRITIRTT
Trigger: GGTGGTACGTATGGTGATCCGGCACCATGAAGAGCAGCGACAAAAGGAGGAGCGAGCTCGGAGAGAGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS GCA 72 bp TGGAGAGGATATGGTCCCAGGAATGGGCAAATCCCTTaGTTTAGGGGGACGCCCACGCCGTCTTTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: WRGYGPRNGQIP*FRGTPTPSFLH
Trigger: GTGGAGAAAAGACGGCGTGGGCGTCCCCCTAAAGCAAGGGATTTGCCCATTCCTGGGACCATATCCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CTGGGAAAGGGAGCGACTGTGTTCGGCTCTCTAAATTaGCGCCTCCTGGAGAGGATATGGTCCCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: LGKGATVFGSLN*RLLERIWSQEW
Trigger: CCATTCCTGGGACCATATCCTCTCCAGGAGGCGGCAATTTAGAGAGCCGAACACAGTCGCTCCCTTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CTGCCTTCACTTTCTGCCTGGCCCAGGGGTTGGCGCTaGACTCCCAGTCCACAACTCTCAAGAATAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LPSLSAWPRGWR*TPSPQLSRIEE
Trigger: CTCTTCTATTCTTGAGAGTTGTGGACTGGGAGTGCAGCGCCAACCCCTGGGCCAGGCAGAAAGTGAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp ATTTGGCTGCAAGGGAGACAAGAGAACAGGTCCAGGTaGCCGAGATGCAGGAACAACTGGTGTTCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: IWLQGRQENRSR*PRCRNNWCSGR
Trigger: CCTGCCGGAACACCAGTTGTTCCTGCATCTCGGCCACCTGGACCTGTTCTCTTGTCTCCCTTGCAGCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GAAGCCAACTGTCCAATGCTGACCACTTCTCCAGCCTaGGGGAGAGGACCAGTATTTGGCTGCAAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: EANCPMLTTSPA*GRGPVFGCKGD
Trigger: GTCTCCCTTGCAGCCAAATACTGGTCCTCTCCCCCAGGCTGGAGAAGTGGTCAGCATTGGACAGTTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186954.5
CDS CCA 72 bp TCACTACAATCTTCACCACGCCTGTATTGTTCACCATaGATGGTGGCATTTGCAGCGGGCGGGGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: SLQSSPRLYCSP*MVAFAAGGAAP
Trigger: TGGGGCAGCCCCGCCCGCTGCAAATGCCACCATCCATGGTGAACAATACAGGCGTGGTGAAGATTGTAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CCA 72 bp CCAGGAGAACGAGGACCAATGGGGCTGGCAACAGGTTaGGGCAAGGTACAGAAATCCAGGACTTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PGERGPMGLATG*GKVQKSRTSVP
Trigger: TGGGACTGAAGTCCTGGATTTCTGTACCTTGCCCCAACCTGTTGCCAGCCCCATTGGTCCTCGTTCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CTCTCAATGATTTCTGACAGCTGCTCTAGTCGCTGCTaGGGAAACAGTACAGCCCGACGGGCAGCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LSMISDSCSSRC*GNSTARRAASV
Trigger: CACTGAGGCTGCCCGTCGGGCTGTACTGTTTCCCCAGCAGCGACTAGAGCAGCTGTCAGAAATCATTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp TCCTCGTGGGGTAGTCGGAACACCTCCTCCTTGGCTTaGTCCAGGTCTTTTCGGGCAGCTTCCACTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SSWGSRNTSSLA*SRSFRAASTCS
Trigger: AGAACAAGTGGAAGCTGCCCGAAAAGACCTGGACCAAGCCAAGGAGGAGGTGTTCCGACTACCCCACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp AGCCTCTCAGGAGCCCTGATTTTCTTGCTGCGCCGGTaGCTGGCTCCACTACTTCCACAAGACATCTCATCC +
Preference number: 6 (lower is better)
Translates to: SLSGALIFLLRR*LAPLLPQDISS
Trigger: GGATGAGATGTCTTGTGGAAGTAGTGGAGCCAGCCACCGGCGCAGCAAGAAAATCAGGGCTCCTGAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GGGGCCTGTCTCACTACAATCTTCACCACGCCTGTATaGTTCACCATGGATGGTGGCATTTGCAGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: GACLTTIFTTPV*FTMDGGICSGR
Trigger: CCGCCCGCTGCAAATGCCACCATCCATGGTGAACAATACAGGCGTGGTGAAGATTGTAGTGAGACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000186954.5
ENSMUST00000190390.7
CDS CAA 72 bp ATACACGGGTGCCAGAGCCCCATGAGCCTCACTAAGTaGGAAAATCCGATCCAGGCGCTCAGATCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: IHGCQSPMSLTK*ENPIQALRSLL
Trigger: CAGCAGCGATCTGAGCGCCTGGATCGGATTTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACCCGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ATCTGGGTAAAAATGAGCACCCGGTGGCCCTCCGCCTaGAGCTGCCGTAACAGCACAGCCAATGTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: IWVKMSTRWPSA*SCRNSTANVCN
Trigger: GTTGCAGACATTGGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ATGGTCAATTCCTCACTACCAGGTAGCAGTGTGGTATaGGTCCCCTCCACAGGACCTGGCACCTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MVNSSLPGSSVV*VPSTGPGTSCC
Trigger: GCAGCAGGAGGTGCCAGGTCCTGTGGAGGGGACCAATACCACACTGCTACCTGGTAGTGAGGAATTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GCTGGGAAAGGGAGCGACTGTGTTCGGCTCTCTAAATaGCCGCCTCCTGGAGAGGATATGGTCCCAGGAATG +
Preference number: 6 (lower is better)
Translates to: AGKGSDCVRLSK*PPPGEDMVPGM
Trigger: CATTCCTGGGACCATATCCTCTCCAGGAGGCGGCAATTTAGAGAGCCGAACACAGTCGCTCCCTTTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp GGCTGGAGACTTTCAGCTGCTGCAGCAATATCAGTAATTTCTTTCTaGGGCCCTAGAGTGGTCGTAGGACCGGGGGTGGGAGGTCCACTG +
Preference number: 6 (lower is better)
Translates to: GWRLSAAAAISVISF*GPRVVVGPGVGGPL
Trigger: CAGTGGACCTCCCACCCCCGGTCCTACGACCACTCTAGGGCCCAAGAAAGAAATTACTGATATTGCTGCAGCAGCTGAAAGTCTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp AGGCCTAGGCACTGGCCTGGGAATTCTTTCTCTCACAGGGCTGCATaGGGGAGGCACAAAGGTGTTGCAGGTATGATGGGAGGATGTGAC +
Preference number: 6 (lower is better)
Translates to: RPRHWPGNSFSHRAA*GRHKGVAGMMGGCD
Trigger: GTCACATCCTCCCATCATACCTGCAACACCTTTGTGCCTCCCCAATGCAGCCCTGTGAGAGAAAGAATTCCCAGGCCAGTGCCTAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCATCACGAGGGGCCTGTCTCACTACAATCTTCACCACGCCTGTATaGTTCACCATGGATGGTGGCACCTGGTTAGCAGCAAGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: PSRGACLTTIFTTPV*FTMDGGTWLAASGR
Trigger: CCTTCCGCTTGCTGCTAACCAGGTGCCACCATCCATGGTGAACAATACAGGCGTGGTGAAGATTGTAGTGAGACAGGCCCCTCGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS TCA 72 bp CCAGCTTTGCTGGAGGCCGGTGGCTGGTTAAGGCTCTaGGACAGAAGGTCTGAGTACTTCTCAGTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: PALLEAGGWLRL*DRRSEYFSVCP
Trigger: AGGGCAAACTGAGAAGTACTCAGACCTTCTGTCTCAGAGCCTTAACCAGCCACCGGCCTCCAGCAAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS GCA 72 bp AAATGCATCAAGGACCACAGCTCCATGAGGCTATTCTaGAAGGGAGTTCCTGTCAGGAGCAGGCGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: KCIKDHSSMRLF*KGVPVRSRRLW
Trigger: CCAGAGGCGCCTGCTCCTGACAGGAACTCCCTTGCAGAATAGCCTCATGGAGCTGTGGTCCTTGATGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp AACCTCTCAATGATTTCTGACAGCTGCTCTAGTCGCTaGTGGGGAAACAGTACAGCCCGACGGGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: NLSMISDSCSSR*WGNSTARRAAS
Trigger: TGAGGCTGCCCGTCGGGCTGTACTGTTTCCCCAGCAGCGACTAGAGCAGCTGTCAGAAATCATTGAGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GTAAAAATGAGCACCCGGTGGCCCTCCGCCTTGAGCTaGCGTAACAGCACAGCCAATGTCTGCAACTTTCCA +
Preference number: 6 (lower is better)
Translates to: VKMSTRWPSALS*RNSTANVCNFP
Trigger: TGGAAAGTTGCAGACATTGGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GGATCAGGTGCAGTTGCTATCTCTAACAGTATGCGGTaGGAAAGACGGTGGCGGGGCAGAAATGTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: GSGAVAISNSMR*ERRWRGRNVSA
Trigger: GGCTGACACATTTCTGCCCCGCCACCGTCTTTCCCACCGCATACTGTTAGAGATAGCAACTGCACCTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GGACCTACTGGTCCTCCTGGTGCTAAAGATAGTGTCTaGGCTGGTGTTGGTACCAGGGATGATGCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GPTGPPGAKDSV*AGVGTRDDAGV
Trigger: GACTCCAGCATCATCCCTGGTACCAACACCAGCCCAGACACTATCTTTAGCACCAGGAGGACCAGTAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CCTGTGTTAAGGCTGGGGCCAGTGCTAAAGTCTGGGTaGCAGATAAATCCAGAGTGGGCACAGGAACTGGAG +
Preference number: 6 (lower is better)
Translates to: PVLRLGPVLKSG*QINPEWAQELE
Trigger: CTCCAGTTCCTGTGCCCACTCTGGATTTATCTGCCACCCAGACTTTAGCACTGGCCCCAGCCTTAACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GGAGCCTGTGTTAAGGCTGGGGCCAGTGCTAAAGTCTaGGTGGCAGATAAATCCAGAGTGGGCACAGGAACT +
Preference number: 6 (lower is better)
Translates to: GACVKAGASAKV*VADKSRVGTGT
Trigger: AGTTCCTGTGCCCACTCTGGATTTATCTGCCACCCAGACTTTAGCACTGGCCCCAGCCTTAACACAGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp AGCTGGCGCACCTGGGCACCAGTCAAAGTCAGTTTGTaGCCCTGGATTTGGAAGGTGAGAGGTTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SWRTWAPVKVSL*PWIWKVRGLLP
Trigger: GGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAGGTGCGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CTGCAGCCAGAAGGGAAGCCTGAGCTGGAGCTGAACTaGGTGATACTGGAAAAGGACTGGTCAGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LQPEGKPELELN*VILEKDWSGLK
Trigger: CTTCAGCCCTGACCAGTCCTTTTCCAGTATCACCAAGTTCAGCTCCAGCTCAGGCTTCCCTTCTGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp ATTCGGGTCATCTGGGTAAAAATGAGCACCCGGTGGCCCTCCGCCTaGAGCTGCCGTAACAGCACAGCCAATGTCTGCAACTTTCCACAA +
Preference number: 6 (lower is better)
Translates to: IRVIWVKMSTRWPSA*SCRNSTANVCNFPQ
Trigger: TTGTGGAAAGTTGCAGACATTGGCTGTGCTGTTACGGCAGCTCAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGATGACCCGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GGAGGCAGAGGGGGTACTGGAGCCAGAGACAATGTTTaGGTTGGACCTACTGGTCCTCCTGGTGCTAAAGAT +
Preference number: 6 (lower is better)
Translates to: GGRGGTGARDNV*VGPTGPPGAKD
Trigger: ATCTTTAGCACCAGGAGGACCAGTAGGTCCAACTCAAACATTGTCTCTGGCTCCAGTACCCCCTCTGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GCTCATCCTTGGGAACAGGTAGCCGGTTTACCATGGTaGCAGGCAAGGAAGCGGCACCAGATGCTGAAACAA +
Preference number: 6 (lower is better)
Translates to: AHPWEQVAGLPW*QARKRHQMLKQ
Trigger: TTGTTTCAGCATCTGGTGCCGCTTCCTTGCCTGTCACCATGGTAAACCGGCTACCTGTTCCCAAGGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CTCCAAAAGCTCATCAAGTGGTTCAGCAGATGCTGCTaGGGGTGGGAGCTCCAGCCCATTGCTCTCATTCAG +
Preference number: 6 (lower is better)
Translates to: LQKLIKWFSRCC*GWELQPIALIQ
Trigger: CTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTGAACCACTTGATGAGCTTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp AGGTTTGCTTCCCCCAGCACTAGTCACTGGACGTTGTaGCAAGGAAGCCAACTGTCCAATGCTGACCACTTC +
Preference number: 6 (lower is better)
Translates to: RFASPSTSHWTL*QGSQLSNADHF
Trigger: GAAGTGGTCAGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GGCACAGGAACTGGAGCAGGGCTCAAGGTAAGTGTTTaGACCGAAGTTGGGACCAGGAGTGAAGCAGATGAT +
Preference number: 6 (lower is better)
Translates to: GTGTGAGLKVSV*TEVGTRSEADD
Trigger: ATCATCTGCTTCACTCCTGGTCCCAACTTCGGTGCAAACACTTACCTTGAGCCCTGCTCCAGTTCCTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GGATGTGACAGGAGTGTGGTTTGCTCCTTGAGTTTCTaGCCGAGCTCCACGAAGACGTTCACTGACACGAGT +
Preference number: 6 (lower is better)
Translates to: GCDRSVVCSLSF*PSSTKTFTDTS
Trigger: ACTCGTGTCAGTGAACGTCTTCGTGGAGCTCGGGCAGAAACTCAAGGAGCAAACCACACTCCTGTCACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CAGCAGATGCTGCTGAGGGTGGGAGCTCCAGCCCATTaGTCTCATTCAGACTCATGGTCAATTCCTCACTAC +
Preference number: 6 (lower is better)
Translates to: QQMLLRVGAPAH*SHSDSWSIPHY
Trigger: GTAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GATGAGGCGTTGTGGTGTAGAATTCGGAGCTGGCACTaGTGTAGTGGTGACAGTTGCTATGGTGGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: DEALWCRIRSWH*CSGDSCYGGGG
Trigger: ACCTCCTCCACCATAGCAACTGTCACCACTACAGCAGTGCCAGCTCCGAATTCTACACCACAACGCCTCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186672.7
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTCACTaGACGTTGTGCCAAGGAAGCCAACTGTCCAATGCT +
Preference number: 6 (lower is better)
Translates to: EGERFASPSTSH*TLCQGSQLSNA
Trigger: AGCATTGGACAGTTGGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CTGCTAGGAGGTGAGGATTCTGGCCCTGACATACTGTaGATCGATGGGCTTCTTGGACTGGCGCTAACTTCA +
Preference number: 6 (lower is better)
Translates to: LLGGEDSGPDIL*IDGLLGLALTS
Trigger: TGAAGTTAGCGCCAGTCCAAGAAGCCCATCGATCCACAGTATGTCAGGGCCAGAATCCTCACCTCCTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GGCTGCAGCATTCTGTTGACCTTCATCTTGACTGGCTaGGGACGAGGTGGAGGATCAGGTGCAGTTGCTATC +
Preference number: 6 (lower is better)
Translates to: GCSILLTFILTG*GRGGGSGAVAI
Trigger: GATAGCAACTGCACCTGATCCTCCACCTCGTCCCAAGCCAGTCAAGATGAAGGTCAACAGAATGCTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GTCAGTTTGTTGCCCTGGATTTGGAAGGTGAGAGGTTaGCTTCCCCCAGCACTAGTCACTGGACGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: VSLLPWIWKVRG*LPPALVTGRCA
Trigger: GGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CACTGGCCTGGGAATTCTTTCTCTCACAGGGCTGCATaGGGGAGGCACAAAGGTGTTGCAGGTATGATGGGA +
Preference number: 6 (lower is better)
Translates to: HWPGNSFSHRAA*GRHKGVAGMMG
Trigger: TCCCATCATACCTGCAACACCTTTGTGCCTCCCCAATGCAGCCCTGTGAGAGAAAGAATTCCCAGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GGGGCCTGTCTCACTACAATCTTCACCACGCCTGTATaGTTCACCATGGATGGTGGCACCTGGTTAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GACLTTIFTTPV*FTMDGGTWLAA
Trigger: TGCTGCTAACCAGGTGCCACCATCCATGGTGAACAATACAGGCGTGGTGAAGATTGTAGTGAGACAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187040.7
CDS CAA 90 bp GCCCCACTAGAATCTGGAGAACTAGATGAGGCAGGAGACACAGGATaGCTGCCTGTCATGCCGTCCGACACCATCTGTGTCTGTAGGATT +
Preference number: 6 (lower is better)
Translates to: APLESGELDEAGDTG*LPVMPSDTICVCRI
Trigger: AATCCTACAGACACAGATGGTGTCGGACGGCATGACAGGCAGCAATCCTGTGTCTCCTGCCTCATCTAGTTCTCCAGATTCTAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000098025.11
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000189136.7
ENSMUST00000190390.7
CDS CAA 90 bp CCAGTCAAAGTCAGTTTGTTGCCCTGGATTTGGAAGGTGAGAGGTTaGCTTCCCCCAGCACTAGTCACTGGACGTTGTGCCAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PVKVSLLPWIWKVRG*LPPALVTGRCAKEA
Trigger: GGCTTCCTTGGCACAACGTCCAGTGACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp AACTTGGAGGCAGAGGGGGTACTGGAGCCAGAGACAATGTTTGAGTaGGACCTACTGGTCCTCCTGGTGCTAAAGATAGTGTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: NLEAEGVLEPETMFE*DLLVLLVLKIVSGL
Trigger: CAGCCCAGACACTATCTTTAGCACCAGGAGGACCAGTAGGTCCAACTCAAACATTGTCTCTGGCTCCAGTACCCCCTCTGCCTCCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp AATTCTTGTGCACACAGCCCTACTTCTCCTGAGTCCAAGGGGAGGTaGGTAACCCCAGGAGAGATGGGAACAGAAAGGGAGTCAAGTGGG +
Preference number: 6 (lower is better)
Translates to: NSCAHSPTSPESKGR*VTPGEMGTERESSG
Trigger: CCCACTTGACTCCCTTTCTGTTCCCATCTCTCCTGGGGTTACCAACCTCCCCTTGGACTCAGGAGAAGTAGGGCTGTGTGCACAAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp TCAAGTGGTTCAGCAGATGCTGCTGAGGGTGGGAGCTCCAGCCCATaGCTCTCATTCAGACTCATGGTCAATTCCTCACTACCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SSGSADAAEGGSSSP*LSFRLMVNSSLPGS
Trigger: GCTACCTGGTAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTGAACCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp ATTGGCTTCAACTTCATCTTCATCTTCACTATCCCCTaGGGCTGGAGCAGAGGCATCACAGGCATAGGCCCC +
Preference number: 6 (lower is better)
Translates to: IGFNFIFIFTIP*GWSRGITGIGP
Trigger: GGGGCCTATGCCTGTGATGCCTCTGCTCCAGCCTCAGGGGATAGTGAAGATGAAGATGAAGTTGAAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp TGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTTaGAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGTC +
Preference number: 6 (lower is better)
Translates to: WAPVKVSLLPWI*KVRGLLPPALV
Trigger: GACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp CTAAATCCAGGTCATCCTGAATTACGGCCATCACCATaGACCCTTCACTCTTTCGTCCCCGCATCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LNPGHPELRPSP*TLHSFVPASLQ
Trigger: CTGAAGGGATGCGGGGACGAAAGAGTGAAGGGTCCATGGTGATGGCCGTAATTCAGGATGACCTGGATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CTGGGCACCAGTCAAAGTCAGTTTGTTGCCCTGGATTaGGAAGGTGAGAGGTTTGCTTCCCCCAGCACTAGT +
Preference number: 6 (lower is better)
Translates to: LGTSQSQFVALD*EGERFASPSTS
Trigger: ACTAGTGCTGGGGGAAGCAAACCTCTCACCTTCCAAATCCAGGGCAACAAACTGACTTTGACTGGTGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ATGATGGGAGGATGTGACAGGAGTGTGGTTTGCTCCTaGAGTTTCTGCCCGAGCTCCACGAAGACGTTCACT +
Preference number: 6 (lower is better)
Translates to: MMGGCDRSVVCS*SFCPSSTKTFT
Trigger: AGTGAACGTCTTCGTGGAGCTCGGGCAGAAACTCAAGGAGCAAACCACACTCCTGTCACATCCTCCCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TCAGCAGATGCTGCTGAGGGTGGGAGCTCCAGCCCATaGCTCTCATTCAGACTCATGGTCAATTCCTCACTA +
Preference number: 6 (lower is better)
Translates to: SADAAEGGSSSP*LSFRLMVNSSL
Trigger: TAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCACCCTCAGCAGCATCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ACTAGAGACCCTGGACGCAGGCGGGTTGAGCGAAATTaGGGAGTTAATGAGACCACAGGTGGTGTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: TRDPGRRRVERN*GVNETTGGVSS
Trigger: AGAACTGACACCACCTGTGGTCTCATTAACTCCCAAATTTCGCTCAACCCGCCTGCGTCCAGGGTCTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp CCCACACCCCCACTTCGAGTTGAAAGGATGAAGCAGAATATGCGTTaGTCCGCATTGAACCGTTCCATCAAGGCCTGTCTCTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: PTPPLRVERMKQNMR*SALNRSIKACLCST
Trigger: AGTGGAGCAGAGACAGGCCTTGATGGAACGGTTCAATGCGGACAAACGCATATTCTGCTTCATCCTTTCAACTCGAAGTGGGGGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp TCATGGTTCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTaGGCCATGGTAGAAGCAATTCGGCGCAGCTTGGCCTGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SWFTFSTLLQNCLTS*AMVEAIRRSLACSS
Trigger: AGAGGAACAGGCCAAGCTGCGCCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGAACCATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS CAA 90 bp CGTTGCCGCTTGGAAAGTCGGCACCGGATAACATGCTCATACTTTTaGGGCATCTGCTTCTCAACATCCACCTTAACTCGGCGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: RCRLESRHRITCSYF*GICFSTSTLTRRSK
Trigger: TTTGCTGCGCCGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCGACTTTCCAAGCGGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CAGCGTTGCCGCTTGGAAAGTCGGCACCGGATAACATaGTCATACTTTTTGGGCATCTGCTTCTCAACATCC +
Preference number: 6 (lower is better)
Translates to: QRCRLESRHRIT*SYFLGICFSTS
Trigger: GGATGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCGACTTTCCAAGCGGCAACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GGTACAGAAATCCAGGACTTCAGTCCCATACACGGGTaGCAGAGCCCCATGAGCCTCACTAAGTTGGAAAAT +
Preference number: 6 (lower is better)
Translates to: GTEIQDFSPIHG*QSPMSLTKLEN
Trigger: ATTTTCCAACTTAGTGAGGCTCATGGGGCTCTGGCACCCGTGTATGGGACTGAAGTCCTGGATTTCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GCCTCATGGTTCACCTTCTCCACATTGCTCCAGAACTaGCTAACATCCTTGGCCATGGTAGAAGCAATTCGG +
Preference number: 6 (lower is better)
Translates to: ASWFTFSTLLQN*LTSLAMVEAIR
Trigger: CCGAATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGAACCATGAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189136.7
CDS CCA 72 bp AGAAATTGCTCTAATACATCCAGCATTCGGGTCATCTaGGTAAAAATGAGCACCCGGTGGCCCTCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: RNCSNTSSIRVI*VKMSTRWPSAL
Trigger: CAAGGCGGAGGGCCACCGGGTGCTCATTTTTACCCAGATGACCCGAATGCTGGATGTATTAGAGCAATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp GTGGGAGCTCCAGCCCATTGCTCTCATTCAGACTCATaGTCAATTCCTCACTACCAGGTAGCAGTGTGGTAT +
Preference number: 6 (lower is better)
Translates to: VGAPAHCSHSDS*SIPHYQVAVWY
Trigger: ATACCACACTGCTACCTGGTAGTGAGGAATTGACCATGAGTCTGAATGAGAGCAATGGGCTGGAGCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TGTAGTCTGTGCCATGAAGTCATCATAGAGACAGCGTaGCCGCTTGGAAAGTCGGCACCGGATAACATGCTC +
Preference number: 6 (lower is better)
Translates to: CSLCHEVIIETA*PLGKSAPDNML
Trigger: GAGCATGTTATCCGGTGCCGACTTTCCAAGCGGCAACGCTGTCTCTATGATGACTTCATGGCACAGACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GTCCTCCTGGTGCTAAAGATAGTGTCTGGGCTGGTGTaGGTACCAGGGATGATGCTGGAGTCAATGACAATG +
Preference number: 6 (lower is better)
Translates to: VLLVLKIVSGLV*VPGMMLESMTM
Trigger: CATTGTCATTGACTCCAGCATCATCCCTGGTACCAACACCAGCCCAGACACTATCTTTAGCACCAGGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TTTGGAGACACAAGACTAGCCAGGGAAGCCTCAGAATaGGTCATTCCAGGCAGCTCTAGAGACTCCACAGGT +
Preference number: 6 (lower is better)
Translates to: FGDTRLAREASE*VIPGSSRDSTG
Trigger: ACCTGTGGAGTCTCTAGAGCTGCCTGGAATGACCAATTCTGAGGCTTCCCTGGCTAGTCTTGTGTCTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp GACCTACTGGTCCTCCTGGTGCTAAAGATAGTGTCTGGGCTGGTGTaGGTACCAGGGATGATGCTGGAGTCAATGACAATGTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: DLLVLLVLKIVSGLV*VPGMMLESMTMSEL
Trigger: CAATTCAGACATTGTCATTGACTCCAGCATCATCCCTGGTACCAACACCAGCCCAGACACTATCTTTAGCACCAGGAGGACCAGTAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp AAGCCTGGTGATCTTGCAGTACCAGCTTGTAAGACGTaGTACACACATGGAAAGCATTGGGCTTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: KPGDLAVPACKT*YTHGKHWAWSS
Trigger: GCTGGACCAAGCCCAATGCTTTCCATGTGTGTATCACGTCTTACAAGCTGGTACTGCAAGATCACCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CAGGAGCAGGCGCCTCTGGCTGTTAAAGTTGAGCAGTaGCTGCCATCGTTGGGACTTGAAATTCTTGATGTT +
Preference number: 6 (lower is better)
Translates to: QEQAPLAVKVEQ*LPSLGLEILDV
Trigger: AACATCAAGAATTTCAAGTCCCAACGATGGCAGTCACTGCTCAACTTTAACAGCCAGAGGCGCCTGCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CCACTTGGCCCACTATCTGCTAAATCCAGGTCATCCTaGATTACGGCCATCACCATGGACCCTTCACTCTTT +
Preference number: 6 (lower is better)
Translates to: PLGPLSAKSRSS*ITAITMDPSLF
Trigger: AAAGAGTGAAGGGTCCATGGTGATGGCCGTAATTCAGGATGACCTGGATTTAGCAGATAGTGGGCCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CGGCACCGGATAACATGCTCATACTTTTTGGGCATCTaGTTCTCAACATCCACCTTAACTCGGCGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: RHRITCSYFLGI*FSTSTLTRRSK
Trigger: TTTGCTGCGCCGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CCAATGCTGACCACTTCTCCAGAAGGCAAACGAGCCTaGATTTCAGGAGATAAGATGAGGCGTTGTGGTGTA +
Preference number: 6 (lower is better)
Translates to: PMLTTSPEGKRA*ISGDKMRRCGV
Trigger: TACACCACAACGCCTCATCTTATCTCCTGAAATGCAGGCTCGTTTGCCTTCTGGAGAAGTGGTCAGCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CCA 72 bp AAGAATGTGTCTGAGACGGAGACAATCCACCAAGAGTaGGTGCTAAAGTTGGGGCTAGGGTCAATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: KNVSETETIHQE*VLKLGLGSMSE
Trigger: CTCAGACATTGACCCTAGCCCCAACTTTAGCACCCACTCTTGGTGGATTGTCTCCGTCTCAGACACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp AAAAGATCCTTTGGAGACACAAGACTAGCCAGGGAAGCCTCAGAATaGGTCATTCCAGGCAGCTCTAGAGACTCCACAGGTGCCAATTCT +
Preference number: 6 (lower is better)
Translates to: KRSFGDTRLAREASE*VIPGSSRDSTGANS
Trigger: AGAATTGGCACCTGTGGAGTCTCTAGAGCTGCCTGGAATGACCAATTCTGAGGCTTCCCTGGCTAGTCTTGTGTCTCCAAAGGATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GTGACAGCGGAAGATGGAGGGTGTACCTCTAAATCCTaGGATGGCTCCTCTTCAATATTTTCTTCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: VTAEDGGCTSKS*DGSSSIFSSGP
Trigger: TGGGCCTGAAGAAAATATTGAAGAGGAGCCATCTCAGGATTTAGAGGTACACCCTCCATCTTCCGCTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 72 bp CTTCATCTGGATGCCAACGCTGCTTGTTACATTGTGTaGCAGCGGAAGATGGAGGGTGTACCTCTAAATCCT +
Preference number: 6 (lower is better)
Translates to: LHLDANAACYIV*QRKMEGVPLNP
Trigger: AGGATTTAGAGGTACACCCTCCATCTTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 72 bp CCATCTCCCAATTCAACATCACGCTGGTCGGAACAATaGTTAAATGGGGACCCCAGTTACCTTTCTCACAGG +
Preference number: 6 (lower is better)
Translates to: PSPNSTSRWSEQ*LNGDPSYLSHR
Trigger: CCTGTGAGAAAGGTAACTGGGGTCCCCATTTAATCATTGTTCCGACCAGCGTGATGTTGAATTGGGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp CATCCTCACTACACTCCTCAGCAGAATCCGACTGACTaGTACTGTCTTCTTGAGCTGCCTCTTCAACTGTTT +
Preference number: 6 (lower is better)
Translates to: HPHYTPQQNPTD*YCLLELPLQLF
Trigger: AAACAGTTGAAGAGGCAGCTCAAGAAGACAGTAGCAGTCAGTCGGATTCTGCTGAGGAGTGTAGTGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp ATGACAAAGATGAACCTCTCAATGATTTCTGACAGCTaGTCTAGTCGCTGCTGGGGAAACAGTACAGCCCGA +
Preference number: 6 (lower is better)
Translates to: MTKMNLSMISDS*SSRCWGNSTAR
Trigger: TCGGGCTGTACTGTTTCCCCAGCAGCGACTAGAGCAGCTGTCAGAAATCATTGAGAGGTTCATCTTTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GTTGAAAGGATGAAGCAGAATATGCGTTTGTCCGCATaGAACCGTTCCATCAAGGCCTGTCTCTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: VERMKQNMRLSA*NRSIKACLCST
Trigger: AGTGGAGCAGAGACAGGCCTTGATGGAACGGTTCAATGCGGACAAACGCATATTCTGCTTCATCCTTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CCACTTCGAGTTGAAAGGATGAAGCAGAATATGCGTTaGTCCGCATTGAACCGTTCCATCAAGGCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: PLRVERMKQNMR*SALNRSIKACL
Trigger: GAGACAGGCCTTGATGGAACGGTTCAATGCGGACAAACGCATATTCTGCTTCATCCTTTCAACTCGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp ATCATCATCGTCATCATCAACATCATCATCCTCTCCCTCATCATCTaGTTCTTCATCTGCTTGGCTCTGGGACTGAGCATCCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: IIIVIINIIILSLII*FFICLALGLSILRL
Trigger: GAGTCGGAGGATGCTCAGTCCCAGAGCCAAGCAGATGAAGAACAAGATGATGAGGGAGAGGATGATGATGTTGATGATGACGATGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp ATTTGGGAGTTAATGAGACCACAGGTGGTGTCAGTTCTAACCCACTaGGCCCACTATCTGCTAAATCCAGGTCATCCTGAATTACGGCCA +
Preference number: 6 (lower is better)
Translates to: IWELMRPQVVSVLTH*AHYLLNPGHPELRP
Trigger: TGGCCGTAATTCAGGATGACCTGGATTTAGCAGATAGTGGGCCAAGTGGGTTAGAACTGACACCACCTGTGGTCTCATTAACTCCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp GTGCAGGTCCAAGGCTTTCTTACGTTTTTCTTCAAGCCGAGACTGTaGTTTGAATTGTACCACCTTCTCCACATTGCTCCAGAACTGCCT +
Preference number: 6 (lower is better)
Translates to: VQVQGFLTFFFKPRL*FELYHLLHIAPELP
Trigger: AGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGCCTTGGACCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp TCATGTCGAAGAAGTTCAATCTCACGCCTCTGGGTCTCTGCATCATaGCCTTCCTGTTGTTCTTCAACCTCAATGGTCTCCTCATCATCT +
Preference number: 6 (lower is better)
Translates to: SCRRSSISRLWVSAS*PSCCSSTSMVSSSS
Trigger: AGATGATGAGGAGACCATTGAGGTTGAAGAACAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGAACTTCTTCGACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp CTCCTTAGTTGTAGTCTGTGCCATGAAGTCATCATAGAGACAGCGTaGCCGCTTGGAAAGTCGGCACCGGATAACATGCTCATACTTTTT +
Preference number: 6 (lower is better)
Translates to: LLSCSLCHEVIIETA*PLGKSAPDNMLILF
Trigger: AAAAAGTATGAGCATGTTATCCGGTGCCGACTTTCCAAGCGGCAACGCTGTCTCTATGATGACTTCATGGCACAGACTACAACTAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp AGCAGGAAACCCATCATTCTCATTAAATTCTGCAAGCTCAGCCACTaGTTCAGCTTTGGCCTGAGTGGCTGCACGGATATCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: SRKPIILIKFCKLSH*FSFGLSGCTDIFFI
Trigger: GATGAAGAAGATATCCGTGCAGCCACTCAGGCCAAAGCTGAACAAGTGGCTGAGCTTGCAGAATTTAATGAGAATGATGGGTTTCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp TCATCTTCTGCCCGACATAATGCCTGCTCCAAAATATaGGTTTGTTTGCTGGCCACAGCCTCCTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: SSSARHNACSKI*VCLLATASSSS
Trigger: AGATGAAGAGGAGGCTGTGGCCAGCAAACAAACTCATATTTTGGAGCAGGCATTATGTCGGGCAGAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GTAAACTCTTCATCATCTTCATCTGGATGCCAACGCTaGTTGTTACATTGTGTGACAGCGGAAGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: VNSSSSSSGCQR*LLHCVTAEDGG
Trigger: CCCTCCATCTTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAGAGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS GCA 72 bp AGCCAAAGTATAACCCTTGGGCTGGAGACTTTCAGCTaGTGCAGCAATATCAGTAATTTCTTTCTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: SQSITLGLETFS*CSNISNFFLGP
Trigger: GGGCCCAAGAAAGAAATTACTGATATTGCTGCAGCAGCTGAAAGTCTCCAGCCCAAGGGTTATACTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp ATACCGCCAGTTCTTACGACGAAAAGCCTGGTGATCTaGCAGTACCAGCTTGTAAGACGTGATACACACATG +
Preference number: 6 (lower is better)
Translates to: IPPVLTTKSLVI*QYQLVRRDTHM
Trigger: CATGTGTGTATCACGTCTTACAAGCTGGTACTGCAAGATCACCAGGCTTTTCGTCGTAAGAACTGGCGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TTGGAAAGTCGGCACCGGATAACATGCTCATACTTTTaGGGCATCTGCTTCTCAACATCCACCTTAACTCGG +
Preference number: 6 (lower is better)
Translates to: LESRHRITCSYF*GICFSTSTLTR
Trigger: CCGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTATGAGCATGTTATCCGGTGCCGACTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp TTAATGAGACCACAGGTGGTGTCAGTTCTAACCCACTaGGCCCACTATCTGCTAAATCCAGGTCATCCTGAA +
Preference number: 6 (lower is better)
Translates to: LMRPQVVSVLTH*AHYLLNPGHPE
Trigger: TTCAGGATGACCTGGATTTAGCAGATAGTGGGCCAAGTGGGTTAGAACTGACACCACCTGTGGTCTCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 90 bp TCTTCAAGCCGAGACTGTTGTTTGAATTGTACCACCTTCTCCACATaGCTCCAGAACTGCCTAACATCCTTGGCCATGGTAGAAGCAATT +
Preference number: 6 (lower is better)
Translates to: SSSRDCCLNCTTFST*LQNCLTSLAMVEAI
Trigger: AATTGCTTCTACCATGGCCAAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 72 bp ACCCATCTAGACGCAAATACAGATGGCCATGGTAGGTaGGAAATTGCTCTAATACATCCAGCATTCGGGTCA +
Preference number: 6 (lower is better)
Translates to: THLDANTDGHGR*EIALIHPAFGS
Trigger: TGACCCGAATGCTGGATGTATTAGAGCAATTTCTCACCTACCATGGCCATCTGTATTTGCGTCTAGATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp GAGTACTTCTCAGTTTGCCCTACAATGAAGTCCAGGTaGAGGTCCAAGGCTTTCTTACGTTTTTCTTCAAGC +
Preference number: 6 (lower is better)
Translates to: EYFSVCPTMKSR*RSKAFLRFSSS
Trigger: GCTTGAAGAAAAACGTAAGAAAGCCTTGGACCTGCACCTGGACTTCATTGTAGGGCAAACTGAGAAGTACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS GCA 72 bp ATGTCGAAGAAGTTCAATCTCACGCCTCTGGGTCTCTaGATCATTGCCTTCCTGTTGTTCTTCAACCTCAAT +
Preference number: 6 (lower is better)
Translates to: MSKKFNLTPLGL*IIAFLLFFNLN
Trigger: ATTGAGGTTGAAGAACAACAGGAAGGCAATGATGCAGAGACCCAGAGGCGTGAGATTGAACTTCTTCGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp AGGTCCAAGGCTTTCTTACGTTTTTCTTCAAGCCGAGACTGTTGTTaGAATTGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACA +
Preference number: 6 (lower is better)
Translates to: RSKAFLRFSSSRDCC*NCTTFSTLLQNCLT
Trigger: TGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGCCTTGGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp TTAGCAGTAAACTCTTCATCATCTTCATCTGGATGCCAACGCTGCTaGTTACATTGTGTGACAGCGGAAGATGGAGGGTGTACCTCTAAA +
Preference number: 6 (lower is better)
Translates to: LAVNSSSSSSGCQRC*LHCVTAEDGGCTSK
Trigger: TTTAGAGGTACACCCTCCATCTTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp CAGAATAAGATACCGCCAGTTCTTACGACGAAAAGCCTGGTGATCTaGCAGTACCAGCTTGTAAGACGTGATACACACATGGAAAGCATT +
Preference number: 6 (lower is better)
Translates to: QNKIPPVLTTKSLVI*QYQLVRRDTHMESI
Trigger: AATGCTTTCCATGTGTGTATCACGTCTTACAAGCTGGTACTGCAAGATCACCAGGCTTTTCGTCGTAAGAACTGGCGGTATCTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp GACTGCCATCGTTGGGACTTGAAATTCTTGATGTTCTaGGCCTCATCCAGAATAAGATACCGCCAGTTCTTA +
Preference number: 6 (lower is better)
Translates to: DCHRWDLKFLMF*ASSRIRYRQFL
Trigger: TAAGAACTGGCGGTATCTTATTCTGGATGAGGCTCAGAACATCAAGAATTTCAAGTCCCAACGATGGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS TCA 72 bp CAGCCAATGTCTGCAACTTTCCACAATCATACTGGATaGGTCTCAAGTCAGGGAACTGAGTACGCATATTAC +
Preference number: 6 (lower is better)
Translates to: QPMSATFHNHTG*VSSQGTEYAYY
Trigger: GTAATATGCGTACTCAGTTCCCTGACTTGAGACTCATCCAGTATGATTGTGGAAAGTTGCAGACATTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp CTTACGTTTTTCTTCAAGCCGAGACTGTTGTTTGAATaGTACCACCTTCTCCACATTGCTCCAGAACTGCCT +
Preference number: 6 (lower is better)
Translates to: LTFFFKPRLLFE*YHLLHIAPELP
Trigger: AGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 90 bp CAAGGCTTTCTTACGTTTTTCTTCAAGCCGAGACTGTTGTTTGAATaGTACCACCTTCTCCACATTGCTCCAGAACTGCCTAACATCCTT +
Preference number: 6 (lower is better)
Translates to: QGFLTFFFKPRLLFE*YHLLHIAPELPNIL
Trigger: AAGGATGTTAGGCAGTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS TCA 72 bp CCACAATCATACTGGATGAGTCTCAAGTCAGGGAACTaGGTACGCATATTACATACAATACGGTGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: PQSYWMSLKSGN*VRILHTIRCKG
Trigger: TCCTTTGCACCGTATTGTATGTAATATGCGTACTCAGTTCCCTGACTTGAGACTCATCCAGTATGATTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS GCA 72 bp TCATTAGCAGTAAACTCTTCATCATCTTCATCTGGATaGCAACGCTGCTTGTTACATTGTGTGACAGCGGAA +
Preference number: 6 (lower is better)
Translates to: SLAVNSSSSSSG*QRCLLHCVTAE
Trigger: TTCCGCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CCA 72 bp CGCAACTGCATCAGAATGTTGATGACACTCATAAAATaGCCTGTAGCTAGTGTCTCCTTAGTTGTAGTCTGT +
Preference number: 6 (lower is better)
Translates to: RNCIRMLMTLIK*PVASVSLVVVC
Trigger: ACAGACTACAACTAAGGAGACACTAGCTACAGGCCATTTTATGAGTGTCATCAACATTCTGATGCAGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7
CDS CAA 72 bp GCTTTCTTACGTTTTTCTTCAAGCCGAGACTGTTGTTaGAATTGTACCACCTTCTCCACATTGCTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: AFLRFSSSRDCC*NCTTFSTLLQN
Trigger: GTTCTGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CAA 72 bp CAAGGCTTTCTTACGTTTTTCTTCAAGCCGAGACTGTaGTTTGAATTGTACCACCTTCTCCACATTGCTCCA +
Preference number: 6 (lower is better)
Translates to: QGFLTFFFKPRL*FELYHLLHIAP
Trigger: TGGAGCAATGTGGAGAAGGTGGTACAATTCAAACAACAGTCTCGGCTTGAAGAAAAACGTAAGAAAGCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CCA 72 bp ATCTTCATTAGCAGTAAACTCTTCATCATCTTCATCTaGATGCCAACGCTGCTTGTTACATTGTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: IFISSKLFIIFI*MPTLLVTLCDS
Trigger: GCTGTCACACAATGTAACAAGCAGCGTTGGCATCCAGATGAAGATGATGAAGAGTTTACTGCTAATGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000188124.7
ENSMUST00000190390.7
CDS CCA 72 bp TTGTGGAGGCGTTTGACTAGACCTTCATTATATTCTTaGCTTCCTTCAATCATGCCAGTTAGAGGGTTAGAA +
Preference number: 6 (lower is better)
Translates to: LWRRLTRPSLYS*LPSIMPVRGLE
Trigger: TTCTAACCCTCTAACTGGCATGATTGAAGGAAGCCAAGAATATAATGAAGGTCTAGTCAAACGCCTCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066582.12
ENSMUST00000186672.7
ENSMUST00000186954.5
ENSMUST00000187040.7
ENSMUST00000190390.7