Pregenerated sensors for SRC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027646Ensembl transcript IDs: ENSMUST00000029175.14, ENSMUST00000092576.11, ENSMUST00000109529.2, ENSMUST00000109531.8, ENSMUST00000109533.8
Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCCGAGGCAACGCAGCCCCAGAGAGAGGATGAAGGGAGGCAGGTaGATCGGAGGCAACACCCGGAAGCCTAGAGGTGACAGTTCTGCG | + |
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Preference number: 1 (lower is better) Translates to: LPRQRSPRERMKGGR*IGGNTRKPRGDSSA Trigger: CGCAGAACTGTCACCTCTAGGCTTCCGGGTGTTGCCTCCGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGCTGCGTTGCCTCGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CCA 90 bp | ACACAAAGGTCCTTGGGCAGCTGGAGTCGGGCAGGGAGAACCGGGTaGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: TQRSLGSWSRAGRTG*QAQARQEHGENMGV Trigger: TACTCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCCAGCTGCCCAAGGACCTTTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR GCA 90 bp | GGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTaGCCCATCCCTGAAGCCCTTCCATGCTCCAAAAGGGGCATTGCC | + |
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Preference number: 1 (lower is better) Translates to: GMGQSLYQPPPVLPG*PIPEALPCSKRGIA Trigger: GGCAATGCCCCTTTTGGAGCATGGAAGGGCTTCAGGGATGGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CCA 90 bp | TGTCAGGGCAGGCCCTGCTTGGCATCCTTCCCTGCAAACATGGCCTaGCTGGCTCGGGTCCCCAGTAGCGGGGACATTATTGCTGTGATG | + |
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Preference number: 1 (lower is better) Translates to: CQGRPCLASFPANMA*LARVPSSGDIIAVM Trigger: CATCACAGCAATAATGTCCCCGCTACTGGGGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAGCAGGGCCTGCCCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR GCA 90 bp | GAACCCTGCCGACTTGAAGCCACTCTCAGGCCCCACCCTGCCCCCTaGCTTGGAGGACAGTTCTCGTTAGTTCCTGAGGAACAGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: EPCRLEATLRPHPAP*LGGQFSLVPEEQKE Trigger: CTCCTTCTGTTCCTCAGGAACTAACGAGAACTGTCCTCCAAGGCAGGGGGCAGGGTGGGGCCTGAGAGTGGCTTCAAGTCGGCAGGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR TCA 90 bp | AAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTaGAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: KAWASFLFGKALWPA*NRPRVKKVGQCQVS Trigger: GCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR TCA 90 bp | GAGTTAGGGAGTCCTGGCACGGGCAGGAGAGCAAGGGCCAGGTGTTaGAATGATCAGGACAAATGGAGGAGCAGGACTCCACACCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: ELGSPGTGRRARARC*NDQDKWRSRTPHPL Trigger: TAAGGGGTGTGGAGTCCTGCTCCTCCATTTGTCCTGATCATTTCAACACCTGGCCCTTGCTCTCCTGCCCGTGCCAGGACTCCCTAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CCA 90 bp | GGGGCAGGAAGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTaGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GAGSTYSQGLGLIPL*KGSLAGLKQTQGEE Trigger: TTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACTTCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR TCA 90 bp | GAGATGCCACAAATCATCAACTGCCCACCTTACAGACCCGGACACTaGGGCAGAGAGAAGCCACCACATAGCCTAAGGGCTGGTCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EMPQIINCPPYRPGH*GREKPPHSLRAGQR Trigger: CCTCTGACCAGCCCTTAGGCTATGTGGTGGCTTCTCTCTGCCTCAGTGTCCGGGTCTGTAAGGTGGGCAGTTGATGATTTGTGGCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGGGGCCTTGGGCTGCCTaGGAGCCACGGAAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GVGQGEPGGKLRLARSTGGPWAA*EPRKKV Trigger: AACCTTCTTCCGTGGCTCTCAGGCAGCCCAAGGCCC...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGCCTTCCCTGCAAACATaGCCTGGCTGGCTCGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GVGQGEPGGKLRLARSTGPSLQT*PGWLGS Trigger: GGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGG...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGGTTCCAGGACCCCCTTaGACGCCCAGCTGTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: GVGQGEPGGKLRLARSTGVPGPP*TPSCGS Trigger: AGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAAC...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGTACAGACCCGGACACTaGGGCAGAGAGAAGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: GVGQGEPGGKLRLARSTGYRPGH*GREKPP Trigger: TGGTGGCTTCTCTCTGCCTCAGTGTCCGGGTCTGTA...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCGCCCCAGAGAGAGGATaGAGGGAGGCAGGTGCATCG | + |
|
Preference number: 2 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVAPERG*REAGAS Trigger: CGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGC...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGACCTTCCCTGCAAACATaGCCTGGCTGGCTCGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GRTGWQAQARQEHGENMGPSLQT*PGWLGS Trigger: GGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGG...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGGCTGCCCCATCCCTaGAGCCCTTCCATGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPRLPHP*SPSMLQ Trigger: TTGGAGCATGGAAGGGCTTCAGGGATGGGGCAGCCT...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCCACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGHRESL*PWQAWD Trigger: GTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTG...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGACACACAGGGGCCCTTaGTTGAGATGCCACAAATCA | + |
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Preference number: 2 (lower is better) Translates to: GVGQGEPGGKLRLARSTGTHRGP*LRCHKS Trigger: TGATTTGTGGCATCTCAACCAAGGGCCCCTGTGTGT...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGATGGCCATGGCAGGCATaGGACAGTCACTGTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRTGWQAQARQEHGENMGWPWQA*DSHCTS Trigger: GCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCA...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCCACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LPLSPGQTHEHQGQQNPAHRESL*PWQAWD Trigger: GTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTG...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAATGGGGCAGTGCCAGGTaGGCGCAGTGGGTCGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LIPLWKGSLAGLKQTQGEWGSAR*AQWVEA Trigger: AGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCA...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTHRESL*PWQAWD Trigger: GTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTG...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTCACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: AEGVLTLTLIPTGVGPWAHRESL*PWQAWD Trigger: GTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTG...AGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CAA 90 bp | CAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTaGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QGLGLIPLWKGSLAG*KQTQGEESGAVPGE Trigger: CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGCCCCAGAGAGAGGATaGAGGGAGGCAGGTGCATCG | + |
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Preference number: 2 (lower is better) Translates to: STYSQGLGLIPLWKGSLAAPERG*REAGAS Trigger: CGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGC...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTGCCCCAGAGAGAGGATaGAGGGAGGCAGGTGCATCG | + |
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Preference number: 2 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFAPERG*REAGAS Trigger: CGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGC...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAGTTCTCGTTAGTTCCTaGGGAACAGAAGGAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GRTGWQAQARQEHGENMGVLVSS*GTEGAP Trigger: TGGTGCTCCTTCTGTTCCTCAGGAACTAACGAGAAC...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCAAGAAGGAGCACCAGGTaGCAAGCCCACCTCAACCCT | + |
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Preference number: 2 (lower is better) Translates to: QTHEHQGQQNPADLKPLSRRSTR*QAHLNP Trigger: AGGGTTGAGGTGGGCTTGGCACCTGGTGCTCCTTCT...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGCCCCACCCTGCCCCCTaGCTTGGAGGACAGTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: RTPHPLALPLLLDCLCSLPHPAP*LGGQFS Trigger: CGAGAACTGTCCTCCAAGGCAGGGGGCAGGGTGGGG...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATGGGGCAGCAGAACCCTaGCGACTTGAAGCCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYGAAEP*RLEATL Trigger: GAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCC...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCTGGCCATGGCAGGCATaGGACAGTCACTGTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTWPWQA*DSHCTS Trigger: GCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCA...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCATGGCCATGGCAGGCATaGGACAGTCACTGTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: QTHEHQGQQNPADLKPLSWPWQA*DSHCTS Trigger: GCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCA...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGACACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAHSDTYPNWCWALGCLRHRESL*PWQAWD Trigger: GTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTG...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGGCCTCATTCCTCTTTaGAAAGGCTCTCTGGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: AEGVLTLTLIPTGVGPWAGLIPL*KGSLAG Trigger: GCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCC...AGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCAGCCTCCAACAAGGATaGCCAGGGGCAGGAAGTACG | + |
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Preference number: 2 (lower is better) Translates to: TEACSTPPLSTPRSWLSLSLQQG*PGAGST Trigger: CGTACTTCCTGCCCCTGGCCATCCTTGTTGGAGGCT...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCGCCCCAGAGAGAGGATaGAGGGAGGCAGGTGCATCG | + |
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Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVAPERG*REAGAS Trigger: CGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGC...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTAGAACCCTGCCGACTTaGAGCCACTCTCAGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFRTLPT*SHSQAP Trigger: TGGGGCCTGAGAGTGGCTTCAAGTCGGCAGGGTTCT...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCAACCACCCCCAGCTCTaGTGTCACAAGTGTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TEACSTPPLSTPRSWLSLNHPQL*CHKCPV Trigger: CACAGGACACTTGTGACAGCAGAGCTGGGGGTGGTT...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTAACCACCCCCAGCTCTaGTGTCACAAGTGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AEGVLTLTLIPTGVGPWANHPQL*CHKCPV Trigger: CACAGGACACTTGTGACAGCAGAGCTGGGGGTGGTT...AGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTGCTCAGCCTCCTGCTTaGCTCTTTCCCCGGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFAQPPA*LFPRDR Trigger: TCTGTCCCGGGGAAAGAGGCAAGCAGGAGGCTGAGC...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGAAACAGACCCAGGGTaGAGAAAGTGGGGCAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: STYSQGLGLIPLWKGSLAETDPG*RKWGSA Trigger: GGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTC...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGAGAACCCTGCCGACTTaGAGCCACTCTCAGGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RTPHPLALPLLLDCLCSLRTLPT*SHSQAP Trigger: TGGGGCCTGAGAGTGGCTTCAAGTCGGCAGGGTTCT...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCTGGCCATGGCAGGCATaGGACAGTCACTGTACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: STYSQGLGLIPLWKGSLAWPWQA*DSHCTS Trigger: GCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCA...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCGAGAGCCTGTGGCCATaGCAGGCATGGGACAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVESLWP*QAWDSH Trigger: GTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCCGTATAGCCAAGGCCTaGGCCTCATTCCTCTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TEACSTPPLSTPRSWLSLRIAKA*ASFLFG Trigger: TCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACG...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGGAAACAGACCCAGGGTaGAGAAAGTGGGGCAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTPHPLALPLLLDCLCSLETDPG*RKWGSA Trigger: GGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTC...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCCTTGGCATCCTTCCCTaGAAACATGGCCTGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVLGILP*KHGLAG Trigger: GCCAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAG...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCGGCCTCATTCCTCTTTaGAAAGGCTCTCTGGCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVGLIPL*KGSLAG Trigger: GCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCC...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGGGCCTCATTCCTCTTTaGAAAGGCTCTCTGGCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: RTPHPLALPLLLDCLCSLGLIPL*KGSLAG Trigger: GCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCC...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCAGCCTCCAACAAGGATaGCCAGGGGCAGGAAGTACG | + |
|
Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVSLQQG*PGAGST Trigger: CGTACTTCCTGCCCCTGGCCATCCTTGTTGGAGGCT...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCAACCACCCCCAGCTCTaGTGTCACAAGTGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ENQTVEATLHKGPWAAGVNHPQL*CHKCPV Trigger: CACAGGACACTTGTGACAGCAGAGCTGGGGGTGGTT...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CAA 90 bp | CACAGATATGTGTACACACACACAAACACACACACACAGGGGCCCTaGGTTGAGATGCCACAAATCATCAACTGCCCACCTTACAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: HRYVYTHTNTHTQGP*VEMPQIINCPPYRP Trigger: GGGTCTGTAAGGTGGGCAGTTGATGATTTGTGGCATCTCAACCAAGGGCCCCTGTGTGTGTGTGTTTGTGTGTGTGTACACATATCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | AGGGCAGGCCCTGCTTGGCATCCTTCCCTGCAAACATaGCCTGGCTGGCTCGGGTCCCCAGTAGCGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: RAGPAWHPSLQT*PGWLGSPVAGT Trigger: TGTCCCCGCTACTGGGGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAGCAGGGCCTGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | TCCTTGGGCAGCTGGAGTCGGGCAGGGAGAACCGGGTaGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLGSWSRAGRTG*QAQARQEHGEN Trigger: ATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCCAGCTGCCCAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | GGGCATTGCCGAGGCAACGCAGCCCCAGAGAGAGGATaGAGGGAGGCAGGTGCATCGGAGGCAACACCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHCRGNAAPERG*REAGASEATPG Trigger: TCCGGGTGTTGCCTCCGATGCACCTGCCTCCCTTCATCCTCTCTCTGGGGCTGCGTTGCCTCGGCAATGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAAACTGGTGTTGGGCCTaGGGCTGCCTGAGAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: GRTGWQAQARQEHGENMGNWCWA*GCLRAT Trigger: CGTGGCTCTCAGGCAGCCCAAGGCCCAACACCAGTT...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGACAGAACCCTGCCGACTaGAAGCCACTCTCAGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRTGWQAQARQEHGENMGQNPAD*KPLSGP Trigger: GGGGCCTGAGAGTGGCTTCAAGTCGGCAGGGTTCTG...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR GCA 72 bp | TGGTCAGAGGAGCCAGGGACCAGACAGTCAGATGTCTaGTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSEEPGTRQSDV*CSRTPLDAQLW Trigger: CCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTGTCTGGTCCCTGGCTCCTCTGACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGACACACACAGGGGCCCTaGGTTGAGATGCCACAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GRTGWQAQARQEHGENMGHTQGP*VEMPQI Trigger: GATTTGTGGCATCTCAACCAAGGGCCCCTGTGTGTG...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | TCCCTTGTGGAGGACGGGCTGAGGGGGTGCTCACTCTaGCACTTATCCCAACTGGTGTTGGGCCTTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVEDGLRGCSL*HLSQLVLGLGL Trigger: CAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGCCCGTCCTCCACAAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | AGCCTCCTGCTTGCCTCTTTCCCCGGGACAGACCCATaGGCATCAGGGGCAGCAGAACCCTGCCGACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLLASFPGTDP*ASGAAEPCRLE Trigger: TTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAAGCAGGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | CCTGCTTGGCATCCTTCCCTGCAAACATGGCCTGGCTaGCTCGGGTCCCCAGTAGCGGGGACATTATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAWHPSLQTWPG*LGSPVAGTLLL Trigger: CAGCAATAATGTCCCCGCTACTGGGGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | AGGCCCTGCTTGGCATCCTTCCCTGCAAACATGGCCTaGCTGGCTCGGGTCCCCAGTAGCGGGGACATTATT | + |
|
Preference number: 3 (lower is better) Translates to: RPCLASFPANMA*LARVPSSGDII Trigger: AATAATGTCCCCGCTACTGGGGACCCGAGCCAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAGCAGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | AACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTaGGCAGCTGGAGTCGGGCAGGGAGAACCGGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NQTVEATLHKGP*AAGVGQGEPGG Trigger: GCCACCCGGTTCTCCCTGCCCGACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | TGCCCCCTGCCTTGGAGGACAGTTCTCGTTAGTTCCTaGGGAACAGAAGGAGCACCAGGTGCCAAGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: CPLPWRTVLVSS*GTEGAPGAKPT Trigger: GGTGGGCTTGGCACCTGGTGCTCCTTCTGTTCCTCAGGAACTAACGAGAACTGTCCTCCAAGGCAGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR GCA 72 bp | CAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTaGCCCATCCCTGAAGCCCTTCCATGCTCCAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QSLYQPPPVLPG*PIPEALPCSKR Trigger: CCTTTTGGAGCATGGAAGGGCTTCAGGGATGGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | GATGGCCAGGGGCAGGAAGTACGTATAGCCAAGGCCTaGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: DGQGQEVRIAKA*ASFLFGKALWP Trigger: CGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACTTCCTGCCCCTGGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | GGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTaGGCCTTGGGCTGCCTGAGAGCCACGGAAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGAHSDTYPNWC*ALGCLRATEEG Trigger: ACCTTCTTCCGTGGCTCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | CCAGGTGCCAAGCCCACCTCAACCCTAAACTGCCCTTaGTCTTGGGCAGGTCACAACCCCTCCTGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGAKPTSTLNCP*SWAGHNPSWIL Trigger: CAGAATCCAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGCTTGGCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | GCAGAGAGTACAGCTCAGAGAGGGCGGGGTCAGTGTTaGTACACAGCAGTAAGGACCCTCGCCTCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AESTAQRGRGQC*YTAVRTLASFP Trigger: GGGAAAGGAGGCGAGGGTCCTTACTGCTGTGTACCAACACTGACCCCGCCCTCTCTGAGCTGTACTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | GCTCGCCAGGAGCACGGGGAGAATATGGGAGTAAAGTaGAACTGTCAGGGCAGGCCCTGCTTGGCATCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ARQEHGENMGVK*NCQGRPCLASF Trigger: GAAGGATGCCAAGCAGGGCCTGCCCTGACAGTTCCACTTTACTCCCATATTCTCCCCGTGCTCCTGGCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGAGGGCCTCATTCCTCTTaGGAAAGGCTCTCTGGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GAHSDTYPNWCWALGCLRGPHSS*ERLSGR Trigger: CCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCC...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTAACTGGTGTTGGGCCTaGGGCTGCCTGAGAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFNWCWA*GCLRAT Trigger: CGTGGCTCTCAGGCAGCCCAAGGCCCAACACCAGTT...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | CAGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTaGCTGTCTCTGCAGCCTGAGAGCTCCCTCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: QDSTPLSSSSST*LSLQPESSLHP Trigger: GGGGTGGAGGGAGCTCTCAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | TGGCACGGGCAGGAGAGCAAGGGCCAGGTGTTGAAATaGTCAGGACAAATGGAGGAGCAGGACTCCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: WHGQESKGQVLK*SGQMEEQDSTP Trigger: GGGTGTGGAGTCCTGCTCCTCCATTTGTCCTGATCATTTCAACACCTGGCCCTTGCTCTCCTGCCCGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR GCA 72 bp | CGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTaGTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: RSGSRLENHPQL*CHKCPVRSRLT Trigger: AGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | ACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATaGCAGGCATGGGACAGTCACTGTACCAGCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TPERMHRESLWP*QAWDSHCTSLH Trigger: GTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | AGACCCAGTGTTCCACCCAGAAGCCTCCAACAAGGATaGCCAGGGGCAGGAAGTACGTATAGCCAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPSVPPRSLQQG*PGAGSTYSQGL Trigger: CAGGCCTTGGCTATACGTACTTCCTGCCCCTGGCCATCCTTGTTGGAGGCTTCTGGGTGGAACACTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTTTATCCCAACTGGTGTaGGGCCTTGGGCTGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFLSQLV*GLGLPE Trigger: CTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAA...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCAAACCCTAAACTGCCCTaGGTCTTGGGCAGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: QTHEHQGQQNPADLKPLSNPKLP*VLGRSQ Trigger: TTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTT...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | AGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTaGCCATGGCAGGCATGGGACAGTCACTGTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLTPERMHRESL*PWQAWDSHCTS Trigger: GCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCTTATCCCAACTGGTGTaGGGCCTTGGGCTGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ENQTVEATLHKGPWAAGVLSQLV*GLGLPE Trigger: CTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAA...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | ACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTaGGAGCCACGGAAGAAGGTTCTAGACCCAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLIPTGVGPWAA*EPRKKVLDPVF Trigger: GAACACTGGGTCTAGAACCTTCTTCCGTGGCTCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR GCA 72 bp | AATATGGGAGTAAAGTGGAACTGTCAGGGCAGGCCCTaGTTGGCATCCTTCCCTGCAAACATGGCCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NMGVKWNCQGRP*LASFPANMAWL Trigger: CAGCCAGGCCATGTTTGCAGGGAAGGATGCCAAGCAGGGCCTGCCCTGACAGTTCCACTTTACTCCCATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR CCA 72 bp | GCCAAGCCCACCTCAACCCTAAACTGCCCTTGGTCTTaGGCAGGTCACAACCCCTCCTGGATTCTGGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AKPTSTLNCPWS*AGHNPSWILVF Trigger: AAAAACCAGAATCCAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR TCA 72 bp | CAAATCATCAACTGCCCACCTTACAGACCCGGACACTaGGGCAGAGAGAAGCCACCACATAGCCTAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QIINCPPYRPGH*GREKPPHSLRA Trigger: AGCCCTTAGGCTATGTGGTGGCTTCTCTCTGCCTCAGTGTCCGGGTCTGTAAGGTGGGCAGTTGATGATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| 3UTR GCA 72 bp | ACACAAACACACACACACAGGGGCCCTTGGTTGAGATaGCACAAATCATCAACTGCCCACCTTACAGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: TQTHTHRGPWLR*HKSSTAHLTDP Trigger: CGGGTCTGTAAGGTGGGCAGTTGATGATTTGTGGCATCTCAACCAAGGGCCCCTGTGTGTGTGTGTTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAACCGGTCTGTCCCGTaGTCAGCGAGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVGQGEPGGKLRLARSTGNRSVP*SASVPA Trigger: GGCTGGCACACTCGCTGAGCACGGGACAGACCGGTT...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAGGTGGTCACCCCACCTaGCAGAGGCCCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGGGHPT*QRPRPL Trigger: CAGAGGGCGGGGCCTCTGGCAGGTGGGGTGACCACC...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCGGTGGTCACCCCACCTaGCAGAGGCCCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGGGHPT*QRPRPL Trigger: CAGAGGGCGGGGCCTCTGGCAGGTGGGGTGACCACC...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCAGGCTGCGGCGCCGCTaGCTGGCGTCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVRLRRR*LASLGL Trigger: CAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCT...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCAGGCTGCGGCGCCGCTaGCTGGCGTCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPRLRRR*LASLGL Trigger: CAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCT...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCCTCCGAAGAGCTTaGGCTCGGCCGCGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPSLRRA*ARPRAA Trigger: TGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCT...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGACGGTAGTGAGGCGGTaGCACAGGCCATCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGQGEPGGKLRLARSTGTVVRR*HRPSAC Trigger: ACATGCTGATGGCCTGTGTCACCGCCTCACTACCGT...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGACGGGAAGGCGCCCCCTaGCCCGTGCACGTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGREGAP*PVHVFR Trigger: TCGGAAAACGTGCACGGGGCAGGGGGCGCCTTCCCG...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCCGGGAAGGCGCCCCCTaGCCCGTGCACGTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPREGAP*PVHVFR Trigger: TCGGAAAACGTGCACGGGGCAGGGGGCGCCTTCCCG...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCAGCCTCCGAAGAGCTTaGGCTCGGCCGCGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPGQTHEHQGQQNPASLRRA*ARPRAA Trigger: TGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCT...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCAGCCTCCGAAGAGCTTaGGCTCGGCCGCGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVSLRRA*ARPRAA Trigger: TGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCT...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCAGAGGCCCCGCCCTCTaGGGGGAGGTGACGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTRGPAL*GEVTVS Trigger: GGACACCGTCACCTCCCCGCAGAGGGCGGGGCCTCT...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCGGTGGTCACCCCACCTaGCAGAGGCCCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLGGHPT*QRPRPL Trigger: CAGAGGGCGGGGCCTCTGGCAGGTGGGGTGACCACC...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCCGTGCTCAGCGAGTGTaGCAGCCACCAGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPRAQRV*QPPVSL Trigger: GAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACG...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCCGTGCTCAGCGAGTGTaGCAGCCACCAGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGRAQRV*QPPVSL Trigger: GAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACG...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCAACCGGTCTGTCCCGTaGTCAGCGAGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPNRSVP*SASVPA Trigger: GGCTGGCACACTCGCTGAGCACGGGACAGACCGGTT...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGCAAAGTCGGCCACTTTaGACACCAGGTTCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GVGQGEPGGKLRLARSTGQSRPL*TPGSPL Trigger: TAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTG...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGTGCGGCGCCGCTGGCTaGCGTCCTTGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGECGAAG*RPWACS Trigger: AGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCA...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAATGCGGCGCCGCTGGCTaGCGTCCTTGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKCGAAG*RPWACS Trigger: AGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCA...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCAGGCTGCGGCGCCGCTaGCTGGCGTCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLRLRRR*LASLGL Trigger: CAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCT...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPYHSSA*MESEGA Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCCGGTGTCCGAGGAGTTaGAGCCTCCGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGRCPRS*SLRRAW Trigger: CCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCG...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCACTGGGTGCGGGAGGTaGTGTAGAAACCGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPTGCGR*CRNRRC Trigger: ACAGCGGCGGTTTCTACATCACCTCCCGCACCCAGT...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCCGGGAAGGCGCCCCCTaGCCCGTGCACGTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLREGAP*PVHVFR Trigger: TCGGAAAACGTGCACGGGGCAGGGGGCGCCTTCCCG...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTGGCAACCCTCGTGGTaGCGTTCCAGGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLWQPSW*RSRSPS Trigger: GGATGGGGACCTGGAACGGCACCACGAGGGTTGCCA...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCTGGCAACCCTCGTGGTaGCGTTCCAGGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVWQPSW*RSRSPS Trigger: GGATGGGGACCTGGAACGGCACCACGAGGGTTGCCA...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCTGCGGCGCCGCTGGCTaGCGTCCTTGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTCGAAG*RPWACS Trigger: AGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCA...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATAGGCTGCGGCGCCGCTaGCTGGCGTCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYRLRRR*LASLGL Trigger: CAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCT...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATAGCCTCCGAAGAGCTTaGGCTCGGCCGCGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYSLRRA*ARPRAA Trigger: TGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCT...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCTCTCCGAAGCAACCCTaGCCCAGCTTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPSPKQP*PSLTSS Trigger: GCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGA...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGGACATGTCCACCAGCTaGGGTAGCCGCAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGQGEPGGKLRLARSTGDMSTS*GSRKYL Trigger: CAAATATTTGCGGCTACCCCAGCTGGTGGACATGTC...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAAGGTTCTCCCCGGGCTaGTACTGTGGCTCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGRFSPG*YCGSVD Trigger: GTCCACTGAGCCACAGTACCAGCCCGGGGAGAACCT...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCGCCGCTCCCCTTTCTTaGAGGACAGGTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVAAPLS*RTGQSL Trigger: CAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGC...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCACTGGGTGCGGGAGGTaGTGTAGAAACCGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPGQTHEHQGQQNPATGCGR*CRNRRC Trigger: ACAGCGGCGGTTTCTACATCACCTCCCGCACCCAGT...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCACGGTAGTGAGGCGGTaGCACAGGCCATCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPTVVRR*HRPSAC Trigger: ACATGCTGATGGCCTGTGTCACCGCCTCACTACCGT...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPANPWV*GLDVGH Trigger: ATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGC...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCTGCCCGTTTCCCCCTTaGGAAAGTCCAGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVCPFPP*ESPADS Trigger: GGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCA...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGATGGCACATAAGGTCATaGAGGGACTCGGGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGWHIRS*RDSGHS Trigger: CGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCA...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGATGCGGCGCCGCTGGCTaGCGTCCTTGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAHSDTYPNWCWALGCLRCGAAG*RPWACS Trigger: AGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCA...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCAGAGGGCCACAAAGGTaGTCACCCCACCTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVRGPQR*SPHLPE Trigger: CTCTGGCAGGTGGGGTGACCACCTTTGTGGCCCTCT...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGAGAGGGCCACAAAGGTaGTCACCCCACCTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLRGPQR*SPHLPE Trigger: CTCTGGCAGGTGGGGTGACCACCTTTGTGGCCCTCT...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAATACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKYHSSA*MESEGA Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCTCTCCCACGCATCCTTaGCCAATCCCTGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPSPTHP*PIPGSE Trigger: CTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGA...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGATCTCCCACGCATCCTTaGCCAATCCCTGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGSPTHP*PIPGSE Trigger: CTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGA...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGAGGTTCTCCCCGGGCTaGTACTGTGGCTCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLRFSPG*YCGSVD Trigger: GTCCACTGAGCCACAGTACCAGCCCGGGGAGAACCT...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCAGGTTCTCCCCGGGCTaGTACTGTGGCTCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPGQTHEHQGQQNPARFSPG*YCGSVD Trigger: GTCCACTGAGCCACAGTACCAGCCCGGGGAGAACCT...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGGTGTCCGAGGAGTTaGAGCCTCCGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGERCPRS*SLRRAW Trigger: CCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCG...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCCGGTGTCCGAGGAGTTaGAGCCTCCGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKVGQCQVSAVGRGWKTRCPRS*SLRRAW Trigger: CCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCG...GGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACTGGGTGCGGGAGGTaGTGTAGAAACCGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKTGCGR*CRNRRC Trigger: ACAGCGGCGGTTTCTACATCACCTCCCGCACCCAGT...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCACGGTAGTGAGGCGGTaGCACAGGCCATCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVTVVRR*HRPSAC Trigger: ACATGCTGATGGCCTGTGTCACCGCCTCACTACCGT...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLANPWV*GLDVGH Trigger: ATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGC...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTGCCCGTTTCCCCCTTaGGAAAGTCCAGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLCPFPP*ESPADS Trigger: GGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCA...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAATGCCTGAAGCGATCTaGGCAGACATGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGMPEAI*ADMSTS Trigger: GCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCAT...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCAGGGGCGGTCCACTTaGTGGGGAATTTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVQGRST*WGIWHL Trigger: AAGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTG...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCACCAGTCTCCCTCTCTaGCATCCACCTTCCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVTSLPL*HPPSSC Trigger: ACACGAGGAAGGTGGATGTCAGAGAGGGAGACTGGT...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092576.11 ENSMUST00000109529.2 |
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| CDS-3UTR GCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCCGGGAAGGCGCCCCCTaGCCCGTGCACGTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLAREGAP*PVHVFR Trigger: TCGGAAAACGTGCACGGGGCAGGGGGCGCCTTCCCG...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPAPHRP*LKRSEQ Trigger: CTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGC...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPAPHRP*LKRSEQ Trigger: CTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGC...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTAGGCTGCGGCGCCGCTaGCTGGCGTCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWKGSLAGLKQTQGEESRLRRR*LASLGL Trigger: CAAGCCCAAGGACGCCAGCCAGCGGCGCCGCAGCCT...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCAGCCTCCGAAGAGCTTaGGCTCGGCCGCGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENQTVEATLHKGPWAAGVSLRRA*ARPRAA Trigger: TGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCT...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGETPQPG*SRRAPH Trigger: ATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCTCTCCCACGCATCCTTaGCCAATCCCTGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVSPTHP*PIPGSE Trigger: CTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGA...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAATCTCCGAAGCAACCCTaGCCCAGCTTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKSPKQP*PSLTSS Trigger: GCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGA...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCAGGCCTCTGGGGACATaGTGCCTGGCTTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGRPLGT*CLASEF Trigger: AAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCT...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCCGGTGTCCGAGGAGTTaGAGCCTCCGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLRCPRS*SLRRAW Trigger: CCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCG...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCACTGGGTGCGGGAGGTaGTGTAGAAACCGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTTGCGR*CRNRRC Trigger: ACAGCGGCGGTTTCTACATCACCTCCCGCACCCAGT...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGACGGTAGTGAGGCGGTaGCACAGGCCATCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGETVVRR*HRPSAC Trigger: ACATGCTGATGGCCTGTGTCACCGCCTCACTACCGT...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGTGCCCGTTTCCCCCTTaGGAAAGTCCAGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGECPFPP*ESPADS Trigger: GGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCA...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAACAGGGGCGGTCCACTTaGTGGGGAATTTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKQGRST*WGIWHL Trigger: AAGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTG...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCAGGGGCGGTCCACTTaGTGGGGAATTTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGEQGRST*WGIWHL Trigger: AAGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTG...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATGGTGGTCACCCCACCTaGCAGAGGCCCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENGGHPT*QRPRPL Trigger: CAGAGGGCGGGGCCTCTGGCAGGTGGGGTGACCACC...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGAAACCGGTCTGTCCCGTaGTCAGCGAGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAHSDTYPNWCWALGCLRNRSVP*SASVPA Trigger: GGCTGGCACACTCGCTGAGCACGGGACAGACCGGTT...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGACGCCGCTGTCCAGCTTaGGGATCTTGTAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGRRCPA*GSCSVS Trigger: TGAAACACTACAAGATCCGCAAGCTGGACAGCGGCG...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGTGGCAACCCTCGTGGTaGCGTTCCAGGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEWQPSW*RSRSPS Trigger: GGATGGGGACCTGGAACGGCACCACGAGGGTTGCCA...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCCAAAGTCGGCCACTTTaGACACCAGGTTCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGQSRPL*TPGSPL Trigger: TAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTG...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCCAAAGTCGGCCACTTTaGACACCAGGTTCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPQSRPL*TPGSPL Trigger: TAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTG...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAATGCGGCGCCGCTGGCTaGCGTCCTTGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPLWKGSLAGLKQTQGECGAAG*RPWACS Trigger: AGAGCAAGCCCAAGGACGCCAGCCAGCGGCGCCGCA...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTTPQPG*SRRAPH Trigger: ATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCAGGCCTCTGGGGACATaGTGCCTGGCTTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVRPLGT*CLASEF Trigger: AAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCT...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGAAGTTTCTTCATGACTTaGGCCTCCTGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRTGWQAQARQEHGENMGSFFMT*ASCRKA Trigger: GGCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACT...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCAGTTTCTTCATGACTTaGGCCTCCTGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVSFFMT*ASCRKA Trigger: GGCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACT...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCTCAACCCTAAACTGCCCTTGGTCTTGGGCAGGTCACAACCCCTCCTGCCCCTACTAGGATATTaGCGGCTCGAAGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHLNPKLPLVLGRSQPLLPLLGY*RLEGPG Trigger: ACCGGGACCTTCGAGCCGCCAATATCCTAGTAGGGG...CAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CAA 72 bp | GGCAGAGAGTACAGCTCAGAGAGGGCGGGGTCAGTGTaGGTACACAGCAGTAAGGACCCTCGCCTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GREYSSERAGSV*VHSSKDPRLLS Trigger: GGAAAGGAGGCGAGGGTCCTTACTGCTGTGTACCAACACTGACCCCGCCCTCTCTGAGCTGTACTCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATCGGTGTCCGAGGAGTTaGAGCCTCCGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYRCPRS*SLRRAW Trigger: CCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCG...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATACTGGGTGCGGGAGGTaGTGTAGAAACCGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYTGCGR*CRNRRC Trigger: ACAGCGGCGGTTTCTACATCACCTCCCGCACCCAGT...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGATGCCTGAAGCGATCTaGGCAGACATGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGEMPEAI*ADMSTS Trigger: GCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCAT...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCATGCCTGAAGCGATCTaGGCAGACATGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKKVGQCQVSAVGRGWKTMPEAI*ADMSTS Trigger: GCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCAT...GGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCCGTGCTCAGCGAGTGTaGCAGCCACCAGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLARAQRV*QPPVSL Trigger: GAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACG...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGAACCGGTCTGTCCCGTaGTCAGCGAGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWNRSVP*SASVPA Trigger: GGCTGGCACACTCGCTGAGCACGGGACAGACCGGTT...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPGQTHEHQGQQNPARRCPA*GSCSVS Trigger: TGAAACACTACAAGATCCGCAAGCTGGACAGCGGCG...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKAPHRP*LKRSEQ Trigger: CTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGC...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCTGGCACATAAGGTCATaGAGGGACTCGGGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLWHIRS*RDSGHS Trigger: CGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCA...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGAAGAGGGCCACAAAGGTaGTCACCCCACCTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAHSDTYPNWCWALGCLRRGPQR*SPHLPE Trigger: CTCTGGCAGGTGGGGTGACCACCTTTGTGGCCCTCT...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLAYHSSA*MESEGA Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGTAGGCACCTTTTGTaGTCTCACTCTCCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPSRHLL*SHSPSR Trigger: TCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACT...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCGGCCATCAGCATGTTTaGAGTAGTAAGCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPGHQHV*SSKPRA Trigger: AGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCTCTCCCACGCATCCTTaGCCAATCCCTGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTSPTHP*PIPGSE Trigger: CTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGA...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCATCTCCCACGCATCCTTaGCCAATCCCTGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTHEHQGQQNPADLKPLSSPTHP*PIPGSE Trigger: CTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGA...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGATCTCCGAAGCAACCCTaGCCCAGCTTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAHSDTYPNWCWALGCLRSPKQP*PSLTSS Trigger: GCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGA...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCAGGCCTCTGGGGACATaGTGCCTGGCTTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKKVGQCQVSAVGRGWKTRPLGT*CLASEF Trigger: AAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCT...GGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCCCCCTACTAGGATATTaGCGGCTCGAAGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLPLLGY*RLEGPG Trigger: ACCGGGACCTTCGAGCCGCCAATATCCTAGTAGGGG...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCCCCTACTAGGATATTaGCGGCTCGAAGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTPLLGY*RLEGPG Trigger: ACCGGGACCTTCGAGCCGCCAATATCCTAGTAGGGG...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEANPWV*GLDVGH Trigger: ATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGC...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR TCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGTGCCCGTTTCCCCCTTaGGAAAGTCCAGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPECPFPP*ESPADS Trigger: GGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCA...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAACGTGCTCAGCGAGTGTaGCAGCCACCAGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPLWKGSLAGLKQTQGERAQRV*QPPVSL Trigger: GAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACG...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGTGGCAACCCTCGTGGTaGCGTTCCAGGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLWQPSW*RSRSPS Trigger: GGATGGGGACCTGGAACGGCACCACGAGGGTTGCCA...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGTGGCACATAAGGTCATaGAGGGACTCGGGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEWHIRS*RDSGHS Trigger: CGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCA...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATTGGCACATAAGGTCATaGAGGGACTCGGGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYWHIRS*RDSGHS Trigger: CGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCA...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGAGAGGGCCACAAAGGTaGTCACCCCACCTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWRGPQR*SPHLPE Trigger: CTCTGGCAGGTGGGGTGACCACCTTTGTGGCCCTCT...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFTPQPG*SRRAPH Trigger: ATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTTACCACTCCTCAGCCTaGATGGAGTCGGAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLWKGSLAGLKQTQGEESYHSSA*MESEGA Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTA...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCAGTAGGCACCTTTTGTaGTCTCACTCTCCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVSRHLL*SHSPSR Trigger: TCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACT...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGTCTCCGAAGCAACCCTaGCCCAGCTTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWSPKQP*PSLTSS Trigger: GCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGA...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTTCTCCGAAGCAACCCTaGCCCAGCTTGACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFSPKQP*PSLTSS Trigger: GCTGGAGGTCAAGCTGGGCCAGGGTTGCTTCGGAGA...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCAGGCCTCTGGGGACATaGTGCCTGGCTTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTRPLGT*CLASEF Trigger: AAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCT...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGAGTTTCTTCATGACTTaGGCCTCCTGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGESFFMT*ASCRKA Trigger: GGCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACT...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCGACATGTCCACCAGCTaGGGTAGCCGCAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVDMSTS*GSRKYL Trigger: CAAATATTTGCGGCTACCCCAGCTGGTGGACATGTC...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTAGGTTCTCCCCGGGCTaGTACTGTGGCTCAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFRFSPG*YCGSVD Trigger: GTCCACTGAGCCACAGTACCAGCCCGGGGAGAACCT...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTGCCGCTCCCCTTTCTTaGAGGACAGGTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFAAPLS*RTGQSL Trigger: CAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGC...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFANPWV*GLDVGH Trigger: ATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGC...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVVLLTI*SRSPFL Trigger: CAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACAC...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTRRCPA*GSCSVS Trigger: TGAAACACTACAAGATCCGCAAGCTGGACAGCGGCG...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATTGGCAACCCTCGTGGTaGCGTTCCAGGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENWQPSW*RSRSPS Trigger: GGATGGGGACCTGGAACGGCACCACGAGGGTTGCCA...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCTGCACCAGTTTCTCGTaGCTCAGTTTCTTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPCTSFS*LSFFMT Trigger: AGTCATGAAGAAACTGAGGCACGAGAAACTGGTGCA...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEAPHRP*LKRSEQ Trigger: CTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGC...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GCTGAGGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTCAAAGTCGGCCACTTTaGACACCAGGTTCTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: AEGVLTLTLIPTGVGPWAQSRPL*TPGSPL Trigger: TAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTG...AGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGTGGCACATAAGGTCATaGAGGGACTCGGGGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWWHIRS*RDSGHS Trigger: CGAGTGCCCCGAGTCCCTGCATGACCTTATGTGCCA...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAAGTAGGCACCTTTTGTaGTCTCACTCTCCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKSRHLL*SHSPSR Trigger: TCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACT...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCTCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPSHLGP*HCRSRI Trigger: TATCCGACTTCGACAATGCCAAGGGCCTAAATGTGA...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCTCAACCCTAAACTGCCCTTGGTCTTGGGCAGGTCACAACCCCTCCTGGGCCATCAGCATGTTTaGAGTAGTAAGCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHLNPKLPLVLGRSQPLLGHQHV*SSKPRA Trigger: AGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC...CAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCGACATGTCCACCAGCTaGGGTAGCCGCAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKKVGQCQVSAVGRGWKTDMSTS*GSRKYL Trigger: CAAATATTTGCGGCTACCCCAGCTGGTGGACATGTC...GGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCGCCGCTCCCCTTTCTTaGAGGACAGGTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENQTVEATLHKGPWAAGVAAPLS*RTGQSL Trigger: CAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGC...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGGCCGCTCCCCTTTCTTaGAGGACAGGTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLAAPLS*RTGQSL Trigger: CAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGC...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLANPWV*GLDVGH Trigger: ATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGC...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAATGCCCGTTTCCCCCTTaGGAAAGTCCAGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPLWKGSLAGLKQTQGECPFPP*ESPADS Trigger: GGAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCA...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGCAGGGGCGGTCCACTTaGTGGGGAATTTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLQGRST*WGIWHL Trigger: AAGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTG...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGACCAGTCTCCCTCTCTaGCATCCACCTTCCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWTSLPL*HPPSSC Trigger: ACACGAGGAAGGTGGATGTCAGAGAGGGAGACTGGT...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092576.11 ENSMUST00000109529.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKKVGQCQVSAVGRGWKTVLLTI*SRSPFL Trigger: CAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACAC...GGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYRRCPA*GSCSVS Trigger: TGAAACACTACAAGATCCGCAAGCTGGACAGCGGCG...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLAAPHRP*LKRSEQ Trigger: CTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGC...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATACTCCTCAGCCTGGATaGAGTCGGAGGGCGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENTPQPG*SRRAPH Trigger: ATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGT...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCAGTAGGCACCTTTTGTaGTCTCACTCTCCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TEACSTPPLSTPRSWLSLSRHLL*SHSPSR Trigger: TCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACT...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCGGCCATCAGCATGTTTaGAGTAGTAAGCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTGHQHV*SSKPRA Trigger: AGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATAGTTTCTTCATGACTTaGGCCTCCTGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYSFFMT*ASCRKA Trigger: GGCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACT...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCCCCCTACTAGGATATTaGCGGCTCGAAGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ENQTVEATLHKGPWAAGVPLLGY*RLEGPG Trigger: ACCGGGACCTTCGAGCCGCCAATATCCTAGTAGGGG...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTCCCCTACTAGGATATTaGCGGCTCGAAGGTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLWKGSLAGLKQTQGEESPLLGY*RLEGPG Trigger: ACCGGGACCTTCGAGCCGCCAATATCCTAGTAGGGG...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CAA 72 bp | GCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTaGGGCTGCCTGAGAGCCACGGAAGAAGGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHSDTYPNWCWA*GCLRATEEGSR Trigger: TCTAGAACCTTCTTCCGTGGCTCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CAA 72 bp | TGCCAAGCCCACCTCAACCCTAAACTGCCCTTGGTCTaGGGCAGGTCACAACCCCTCCTGGATTCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CQAHLNPKLPLV*GRSQPLLDSGF Trigger: AAAACCAGAATCCAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGCTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATGCCGCTCCCCTTTCTTaGAGGACAGGTCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENAAPLS*RTGQSL Trigger: CAGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGC...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCAGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTHEHQGQQNPADLKPLSVLLTI*SRSPFL Trigger: CAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACAC...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGTGCACCAGTTTCTCGTaGCTCAGTTTCTTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LAGLKQTQGEESGAVPGECTSFS*LSFFMT Trigger: AGTCATGAAGAAACTGAGGCACGAGAAACTGGTGCA...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCCAAAGTCGGCCACTTTaGACACCAGGTTCTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLAQSRPL*TPGSPL Trigger: TAGGGGAGAACCTGGTGTGCAAAGTGGCCGACTTTG...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAAGGCCTCTGGGGACATaGTGCCTGGCTTCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPLWKGSLAGLKQTQGERPLGT*CLASEF Trigger: AAACTCTGAAGCCAGGCACCATGTCCCCAGAGGCCT...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGGACATGTCCACCAGCTaGGGTAGCCGCAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEDMSTS*GSRKYL Trigger: CAAATATTTGCGGCTACCCCAGCTGGTGGACATGTC...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATATGCCTGAAGCGATCTaGGCAGACATGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENMPEAI*ADMSTS Trigger: GCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCAT...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTAGTAGGCACCTTTTGTaGTCTCACTCTCCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFSRHLL*SHSPSR Trigger: TCGTGAGGGAGAGTGAGACCACAAAAGGTGCCTACT...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | ACCCCAGCCCACCCACACTGTGACAAACAGAAGCCTGTTCCACACCACCACTTTGACATGTCCACCAGCTaGGGTAGCCGCAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPAHPHCDKQKPVPHHHFDMSTS*GSRKYL Trigger: CAAATATTTGCGGCTACCCCAGCTGGTGGACATGTC...AAAGTGGTGGTGTGGAACAGGCTTCTGTTTGTCACAGTGTGGGTGGGCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATCGCCGCTGTCCAGCTTaGGGATCTTGTAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENRRCPA*GSCSVS Trigger: TGAAACACTACAAGATCCGCAAGCTGGACAGCGGCG...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATTGCACCAGTTTCTCGTaGCTCAGTTTCTTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYCTSFS*LSFFMT Trigger: AGTCATGAAGAAACTGAGGCACGAGAAACTGGTGCA...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGATCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GAHSDTYPNWCWALGCLRSHLGP*HCRSRI Trigger: TATCCGACTTCGACAATGCCAAGGGCCTAAATGTGA...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGCCATCAGCATGTTTaGAGTAGTAAGCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWKGSLAGLKQTQGEESGHQHV*SSKPRA Trigger: AGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPLWKGSLAGLKQTQGEVLLTI*SRSPFL Trigger: CAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACAC...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGTCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLTPERMHRESLWPWSHLGP*HCRSRI Trigger: TATCCGACTTCGACAATGCCAAGGGCCTAAATGTGA...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCTCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: STYSQGLGLIPLWKGSLASHLGP*HCRSRI Trigger: TATCCGACTTCGACAATGCCAAGGGCCTAAATGTGA...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATGGCCATCAGCATGTTTaGAGTAGTAAGCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PALLSQVSCEKQANSRENGHQHV*SSKPRA Trigger: AGCTCGTGGCTTACTACTCCAAACATGCTGATGGCC...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| 3UTR CAA 72 bp | GTGTACACACACACAAACACACACACACAGGGGCCCTaGGTTGAGATGCCACAAATCATCAACTGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VYTHTNTHTQGP*VEMPQIINCPP Trigger: AGGTGGGCAGTTGATGATTTGTGGCATCTCAACCAAGGGCCCCTGTGTGTGTGTGTTTGTGTGTGTGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR GCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGTGCACCAGTTTCTCGTaGCTCAGTTTCTTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLCTSFS*LSFFMT Trigger: AGTCATGAAGAAACTGAGGCACGAGAAACTGGTGCA...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CCA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGTCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RTPHPLALPLLLDCLCSLSHLGP*HCRSRI Trigger: TATCCGACTTCGACAATGCCAAGGGCCTAAATGTGA...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 90 bp | CGAAGGCGGCGCTGGGCCCGCGGTGGCCGTCGGCGGAGGCGGGCTTaGTCGGTGTCTGTGAGGCCGGGAAGGCGCCCCCTGCCCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRRWARGGRRRRRA*SVSVRPGRRPLPRA Trigger: TGCACGGGGCAGGGGGCGCCTTCCCGGCCTCACAGACACCGAGCAAGCCCGCCTCCGCCGACGGCCACCGCGGGCCCAGCGCCGCCTTCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCAAGCCTCCGAAGAGCTaGGGCTCGGCCGCGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGKPPKS*GSAAGG Trigger: GCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCTT...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GCCCACCTCAACCCTAAACTGCCCTTGGTCTTGGGCAGGTCACAACCCCTCCTGAAGCCTCCGAAGAGCTaGGGCTCGGCCGCGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHLNPKLPLVLGRSQPLLKPPKS*GSAAGG Trigger: GCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCTT...CAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGCCGCTCCCCTTTCTaGAAGGACAGGTCAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVGQGEPGGKLRLARSTGSRSPF*KDRSVS Trigger: AGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCT...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GGAGTCGGGCAGGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGGGCAGTAGGCACCTTTaGTGGTCTCACTCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVGQGEPGGKLRLARSTGGSRHL*WSHSPS Trigger: TGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCC...CCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCCTGCCCGACTCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCTTCCAGGCTGCCCCCGCTGGCTGGCGTCCTaGGGCTTGCTCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGMGQSLYQPPPVLPGCPRWLAS*GLLLLL Trigger: CAGCAACAAGAGCAAGCCCAAGGACGCCAGCCAGCG...GGGGCAGCCTGGAAGGACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGLGFSA*SSSRSD Trigger: ATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAG...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CCA 90 bp | ACCACTCCTCAGCCTGGATGGAGTCGGAGGGCGCCACATAGTTGCTaGGGATGTAACCGGTCTGTCCCGTGCTCAGCGAGTGTGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTPQPGWSRRAPHSC*GCNRSVPCSASVPA Trigger: GGCTGGCACACTCGCTGAGCACGGGACAGACCGGTTACATCCCCAGCAACTATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLSPGQTHEHQGQQNPALGFSA*SSSRSD Trigger: ATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAG...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCTGGCTGGCGTCCTaGGGCTTGCTCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGLKQTQGEESGAVPGERWLAS*GLLLLL Trigger: CAGCAACAAGAGCAAGCCCAAGGACGCCAGCCAGCG...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCACGGTGTCCGAGGAGTaGAAGCCTCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVTVSEE*KPPKSL Trigger: CAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGT...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAGCCGCTCCCCTTTCTaGAAGGACAGGTCAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRVKKVGQCQVSAVGRGWSRSPF*KDRSVS Trigger: AGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCT...CCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGTTGCCCGTTTCCCCCTaGAGAAAGTCCAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PRVKKVGQCQVSAVGRGWLPVSP*RKSSRL Trigger: GAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAA...CCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCCACTTGATGGGGAATTaGGCACCTTGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVGQCQVSAVGRGWKTTPHLMGN*APCRAV Trigger: CACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTG...GGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTCAGGGGCGGTCCACTaGATGGGGAATTTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGSGAVH*MGNLAP Trigger: AGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTGA...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 90 bp | AGTACCACTCCTCAGCCTGGATGGAGTCGGAGGGCGCCACATAGTTaGTGGGGATGTAACCGGTCTGTCCCGTGCTCAGCGAGTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: STTPQPGWSRRAPHS*WGCNRSVPCSASVP Trigger: TGGCACACTCGCTGAGCACGGGACAGACCGGTTACATCCCCAGCAACTATGTGGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGGGGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTCGCTGGCTGGCGTCCTaGGGCTTGCTCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEGVLTLTLIPTGVGPWARWLAS*GLLLLL Trigger: CAGCAACAAGAGCAAGCCCAAGGACGCCAGCCAGCG...AGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACCCCCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCAGCCGCTCCCCTTTCTaGAAGGACAGGTCAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGSRSPF*KDRSVS Trigger: AGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCT...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCGGCAGTAGGCACCTTTaGTGGTCTCACTCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVGSRHL*WSHSPS Trigger: TGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCC...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAACCGGGTGGCAAGCTCAGGCTCGCCAGGAGCACGGGGAGAATATGGGATTGCCCGTTTCCCCCTaGAGAAAGTCCAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GRTGWQAQARQEHGENMGLPVSP*RKSSRL Trigger: GAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAA...TCCCATATTCTCCCCGTGCTCCTGGCGAGCCTGAGCTTGCCACCCGGTTCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAACCACCCCCAGCTCTGCTGTCGACCACACATCCGACTaGATGGTGAACCTGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CQVSAVGRGWKTTPSSAVDHTSD*MVNLPY Trigger: GTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTC...GACAGCAGAGCTGGGGGTGGTTTTCCAGCCTCGACCCACTGCGCTCACCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGAGCCGCTCCCCTTTCTaGAAGGACAGGTCAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLSRSPF*KDRSVS Trigger: AGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCT...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCACTTGATGGGGAATTaGGCACCTTGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGLKQTQGEESGAVPGEHLMGN*APCRAV Trigger: CACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTG...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACCACACATCCGACTaGATGGTGAACCTGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSPGQTHEHQGQQNPADHTSD*MVNLPY Trigger: GTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTC...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS TCA 90 bp | GAGGAAGGTCCCTCTCGGGTTCTCGGCGTTGAGCAGCAGCCGCTCTaGTTCCCGTCTAGTGATCTTGCCAAAGTACCACTCCTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EEGPSRVLGVEQQPL*FPSSDLAKVPLLSL Trigger: CAGGCTGAGGAGTGGTACTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAGAGGGACCTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCACGGTGTCCGAGGAGTaGAAGCCTCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEACSTPPLSTPRSWLSLTVSEE*KPPKSL Trigger: CAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGT...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCACGGTGTCCGAGGAGTaGAAGCCTCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTTVSEE*KPPKSL Trigger: CAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGT...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRSRLTPERMHRESLWPWLGFSA*SSSRSD Trigger: ATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAG...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGGGCAGTAGGCACCTTTaGTGGTCTCACTCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAGLKQTQGEESGAVPGEGSRHL*WSHSPS Trigger: TGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCC...CTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACCTCAACCCTAAACTGCCCTTGGTCTTGGGCAGGTCACAACCCCTCCTGCAGTTTCTTCATGACTaGGGCCTCCTGCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHLNPKLPLVLGRSQPLLQFLHD*GLLQEG Trigger: GCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACTG...CAGGAGGGGTTGTGACCTGCCCAAGACCAAGGGCAGTTTAGGGTTGAGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCACACTTGATGGGGAATTaGGCACCTTGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTHEHQGQQNPADLKPLSHLMGN*APCRAV Trigger: CACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTG...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCCACTTGATGGGGAATTaGGCACCTTGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TEACSTPPLSTPRSWLSLHLMGN*APCRAV Trigger: CACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTG...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCATCAGGGGCGGTCCACTaGATGGGGAATTTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QTHEHQGQQNPADLKPLSSGAVH*MGNLAP Trigger: AGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTGA...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTGGAAAGACCACACATCCGACTaGATGGTGAACCTGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RVKKVGQCQVSAVGRGWKDHTSD*MVNLPY Trigger: GTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTC...TTTCCAGCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGAACGGTGTCCGAGGAGTaGAAGCCTCCGAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAHSDTYPNWCWALGCLRTVSEE*KPPKSL Trigger: CAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGT...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLWKGSLAGLKQTQGEESLGFSA*SSSRSD Trigger: ATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAG...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GAAAACCAGACAGTTGAGGCCACCTTACACAAAGGTCCTTGGGCAGCTGGAGTCCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ENQTVEATLHKGPWAAGVLGFSA*SSSRSD Trigger: ATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAG...GACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGTCTGGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCTTTAGGCCCTTGGCATaGTCGAAGTCGGATACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLSPGQTHEHQGQQNPAFRPLA*SKSDTE Trigger: CTCTGTATCCGACTTCGACAATGCCAAGGGCCTAAA...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCTTTAGGCCCTTGGCATaGTCGAAGTCGGATACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPVAMAGMGQSLYQPPPVFRPLA*SKSDTE Trigger: CTCTGTATCCGACTTCGACAATGCCAAGGGCCTAAA...GACAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGACCCAGGGTGAAGAAAGTGGGGCAGTGCCAGGTGAGCGCAGTGGGTCGAGGCTTCACATTTAGGCCCTaGGCATTGTCGAAGTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPRVKKVGQCQVSAVGRGFTFRP*ALSKSD Trigger: ATCCGACTTCGACAATGCCAAGGGCCTAAATGTGAA...GCCTCGACCCACTGCGCTCACCTGGCACTGCCCCACTTTCTTCACCCTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGTTTCTTCATGACTaGGGCCTCCTGCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTQFLHD*GLLQEG Trigger: GCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACTG...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTGTGGCCATGGCAGGCATGGGACAGTCACTGTACCAGCCTCCACCTGTCCAGCAGACTCCCCTaGTTCATGTACTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ESLWPWQAWDSHCTSLHLSSRLP*FMYSVT Trigger: TGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGA...CAGGTGGAGGCTGGTACAGTGACTGTCCCATGCCTGCCATGGCCACAGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTTTCCCCGGGACAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCTCCAGCAGACTCCCCTaGTTCATGTACTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPLSPGQTHEHQGQQNPASSRLP*FMYSVT Trigger: TGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGA...GGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTGTCCCGGGGAAAGAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCCTGTTCCACACCACCACTTTCTACCCCTCGCTCCTGGCTCAGCCTCTTGCCCGTTTCCCCCTaGAGAAAGTCCAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: TEACSTPPLSTPRSWLSLLPVSP*RKSSRL Trigger: GAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAA...GAGGCTGAGCCAGGAGCGAGGGGTAGAAAGTGGTGGTGTGGAACAGGCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGCACTTGATGGGGAATTaGGCACCTTGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEHLMGN*APCRAV Trigger: CACAGCCCGGCAAGGTGCCAAATTCCCCATCAAGTG...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGATCAGGGGCGGTCCACTaGATGGGGAATTTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GAHSDTYPNWCWALGCLRSGAVH*MGNLAP Trigger: AGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTGA...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATGGCAGTAGGCACCTTTaGTGGTCTCACTCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYGSRHL*WSHSPS Trigger: TGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCC...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CACCCCCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGCAGTTTCTTCATGACTaGGGCCTCCTGCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPQLCCHKCPVRSRLTPEQFLHD*GLLQEG Trigger: GCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACTG...CTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGATGTCTGCTGTTCCAGGACCCCCTTGGACGCCCAGCTGTGGATCTATCAGTTTCTTCATGACTaGGGCCTCCTGCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSDVCCSRTPLDAQLWIYQFLHD*GLLQEG Trigger: GCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACTG...ATAGATCCACAGCTGGGCGTCCAAGGGGGTCCTGGAACAGCAGACATCTGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCACTCTGACACTTATCCCAACTGGTGTTGGGCCTTGGGCTGCCTGAGAGACCACACATCCGACTaGATGGTGAACCTGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GAHSDTYPNWCWALGCLRDHTSD*MVNLPY Trigger: GTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTC...TCTCAGGCAGCCCAAGGCCCAACACCAGTTGGGATAAGTGTCAGAGTGAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCTTTAGGCCCTTGGCATaGTCGAAGTCGGATACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGLIPLWKGSLAGLKQTFRPLA*SKSDTE Trigger: CTCTGTATCCGACTTCGACAATGCCAAGGGCCTAAA...GGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CAGACCCATGAGCATCAGGGGCAGCAGAACCCTGCCGACTTGAAGCCACTCTCATCCAGCAGACTCCCCTaGTTCATGTACTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QTHEHQGQQNPADLKPLSSSRLP*FMYSVT Trigger: TGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGA...TGAGAGTGGCTTCAAGTCGGCAGGGTTCTGCTGCCCCTGATGCTCATGGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGTTGCCCGTTTCCCCCTaGAGAAAGTCCAGCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: VRSRLTPERMHRESLWPWLPVSP*RKSSRL Trigger: GAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAA...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAATCAGGGGCGGTCCACTaGATGGGGAATTTGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: LIPLWKGSLAGLKQTQGESGAVH*MGNLAP Trigger: AGGTGCCAAATTCCCCATCAAGTGGACCGCCCCTGA...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGTACGTATAGCCAAGGCCTGGGCCTCATTCCTCTTTGGAAAGGCTCTCTGGCCGACCACACATCCGACTaGATGGTGAACCTGCCGTAC | + |
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Preference number: 5 (lower is better) Translates to: STYSQGLGLIPLWKGSLADHTSD*MVNLPY Trigger: GTACGGCAGGTTCACCATCAAGTCGGATGTGTGGTC...GGCCAGAGAGCCTTTCCAAAGAGGAATGAGGCCCAGGCCTTGGCTATACGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAAGCCGCTCCCCTTTCTaGAAGGACAGGTCAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LIPLWKGSLAGLKQTQGESRSPF*KDRSVS Trigger: AGAGACTGACCTGTCCTTCAAGAAAGGGGAGCGGCT...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CTCATTCCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGGCAGTAGGCACCTTTaGTGGTCTCACTCTCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LIPLWKGSLAGLKQTQGEGSRHL*WSHSPS Trigger: TGAGGGAGAGTGAGACCACAAAAGGTGCCTACTGCC...TTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGGAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTCAGTTTCTTCATGACTaGGGCCTCCTGCAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PLWKGSLAGLKQTQGEESQFLHD*GLLQEG Trigger: GCCTTCCTGCAGGAGGCCCAAGTCATGAAGAAACTG...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATTTGCCCGTTTCCCCCTaGAGAAAGTCCAGCAGACTC | + |
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Preference number: 5 (lower is better) Translates to: PALLSQVSCEKQANSRENLPVSP*RKSSRL Trigger: GAGTCTGCTGGACTTTCTCAAGGGGGAAACGGGCAA...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGCAGGCTAACTCCAGAGAGAATGCACAGAGAGAGCCTGTGGCCATGGTTCACATTTAGGCCCTaGGCATTGTCGAAGTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: VRSRLTPERMHRESLWPWFTFRP*ALSKSD Trigger: ATCCGACTTCGACAATGCCAAGGGCCTAAATGTGAA...CCATGGCCACAGGCTCTCTCTGTGCATTCTCTCTGGAGTTAGCCTGCTTCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | AGGACTCCACACCCCTTAGCTCTTCCTCTTCTACTTGACTGTCTCTGCAGCCTGTCCAGCAGACTCCCCTaGTTCATGTACTCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RTPHPLALPLLLDCLCSLSSRLP*FMYSVT Trigger: TGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGA...CAGGCTGCAGAGACAGTCAAGTAGAAGAGGAAGAGCTAAGGGGTGTGGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCTCTTTGGAAAGGCTCTCTGGCCGGCTTGAAACAGACCCAGGGTGAAGAAAGTTCCAGCAGACTCCCCTaGTTCATGTACTCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: PLWKGSLAGLKQTQGEESSSRLP*FMYSVT Trigger: TGTGACAGAGTACATGAACAAGGGGAGTCTGCTGGA...ACTTTCTTCACCCTGGGTCTGTTTCAAGCCGGCCAGAGAGCCTTTCCAAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATTTTAGGCCCTTGGCATaGTCGAAGTCGGATACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PALLSQVSCEKQANSRENFRPLA*SKSDTE Trigger: CTCTGTATCCGACTTCGACAATGCCAAGGGCCTAAA...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTGCTGTCACAAGTGTCCTGTGAGAAGCAGGCTAACTCCAGAGAGAATTTCACATTTAGGCCCTaGGCATTGTCGAAGTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: PALLSQVSCEKQANSRENFTFRP*ALSKSD Trigger: ATCCGACTTCGACAATGCCAAGGGCCTAAATGTGAA...ATTCTCTCTGGAGTTAGCCTGCTTCTCACAGGACACTTGTGACAGCAGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 72 bp | CGCTGGGCCCGCGGTGGCCGTCGGCGGAGGCGGGCTTaGTCGGTGTCTGTGAGGCCGGGAAGGCGCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RWARGGRRRRRA*SVSVRPGRRPL Trigger: CAGGGGGCGCCTTCCCGGCCTCACAGACACCGAGCAAGCCCGCCTCCGCCGACGGCCACCGCGGGCCCAGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 90 bp | TGCGGGGAGGTGACGGTGTCCGAGGAGTTGAAGCCTCCGAAGAGCTaGGGCTCGGCCGCGGGCGGCACGAAGGCGGCGCTGGGCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CGEVTVSEELKPPKS*GSAAGGTKAALGPR Trigger: CCGCGGGCCCAGCGCCGCCTTCGTGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGTCACCTCCCCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 72 bp | GTGACGGTGTCCGAGGAGTTGAAGCCTCCGAAGAGCTaGGGCTCGGCCGCGGGCGGCACGAAGGCGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: VTVSEELKPPKS*GSAAGGTKAAL Trigger: CAGCGCCGCCTTCGTGCCGCCCGCGGCCGAGCCCAAGCTCTTCGGAGGCTTCAACTCCTCGGACACCGTCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS TCA 72 bp | GGGATCTCCCACGCATCCTTGGCCAATCCCTGGGTCTaGGGCTTGGATGTGGGACATACGGTAGTGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GISHASLANPWV*GLDVGHTVVRR Trigger: CCGCCTCACTACCGTATGTCCCACATCCAAGCCTCAGACCCAGGGATTGGCCAAGGATGCGTGGGAGATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 72 bp | GGGGATGTAACCGGTCTGTCCCGTGCTCAGCGAGTGTaGCAGCCACCAGTCTCCCTCTCTGACATCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: GDVTGLSRAQRV*QPPVSLSDIHL Trigger: AAGGTGGATGTCAGAGAGGGAGACTGGTGGCTGGCACACTCGCTGAGCACGGGACAGACCGGTTACATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092576.11 ENSMUST00000109529.2 |
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| CDS CAA 72 bp | TCCCTCACGAGGAAGGTCCCTCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGATTCCCGTCTAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: SLTRKVPLGFSA*SSSRSDSRLVI Trigger: GATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAGAGGGACCTTCCTCGTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 90 bp | TTCTCGGCGTTGAGCAGCAGCCGCTCTGATTCCCGTCTAGTGATCTaGCCAAAGTACCACTCCTCAGCCTGGATGGAGTCGGAGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: FSALSSSRSDSRLVI*PKYHSSAWMESEGA Trigger: GGCGCCCTCCGACTCCATCCAGGCTGAGGAGTGGTACTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAACGCCGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 90 bp | GTCTCACTCTCCCTCACGAGGAAGGTCCCTCTCGGGTTCTCGGCGTaGAGCAGCAGCCGCTCTGATTCCCGTCTAGTGATCTTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSLSLTRKVPLGFSA*SSSRSDSRLVILPK Trigger: CTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAGAGGGACCTTCCTCGTGAGGGAGAGTGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS TCA 72 bp | CCCTCTCGGGTTCTCGGCGTTGAGCAGCAGCCGCTCTaGTTCCCGTCTAGTGATCTTGCCAAAGTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: PSRVLGVEQQPL*FPSSDLAKVPL Trigger: GAGTGGTACTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAACGCCGAGAACCCGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 72 bp | CCCGGTGCACATAGTTCATCCGCTCCACATAGGCCATaGCTGAAGCGATCTGAGCAGACATGTCCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGAHSSSAPHRP*LKRSEQTCPPA Trigger: AGCTGGTGGACATGTCTGCTCAGATCGCTTCAGGCATGGCCTATGTGGAGCGGATGAACTATGTGCACCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 72 bp | ATGGGGAATTTGGCACCTTGCCGGGCTGTGTATTCGTaGTCTTCTATGAGCCGGGCCAACCCAAAGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: MGNLAPCRAVYS*SSMSRANPKSA Trigger: GGCCGACTTTGGGTTGGCCCGGCTCATAGAAGACAACGAATACACAGCCCGGCAAGGTGCCAAATTCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 72 bp | GCCAGCCACCAGTCTCCCTCTGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTGAAGGACAGGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASHQSPSVLLTI*SRSPFLKDRSV Trigger: GACTGACCTGTCCTTCAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACACAGAGGGAGACTGGTGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029175.14 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS CAA 72 bp | TTGAGCAGCAGCCGCTCTGATTCCCGTCTAGTGATCTaGCCAAAGTACCACTCCTCAGCCTGGATGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSSSRSDSRLVI*PKYHSSAWMES Trigger: CGACTCCATCCAGGCTGAGGAGTGGTACTTTGGCAAGATCACTAGACGGGAATCAGAGCGGCTGCTGCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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| CDS GCA 72 bp | TCTCTGACATCCACCTTCCTCGTGTTATTGACAATCTaGAGCCGCTCCCCTTTCTTGAAGGACAGGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLTSTFLVLLTI*SRSPFLKDRSV Trigger: GACTGACCTGTCCTTCAAGAAAGGGGAGCGGCTGCAGATTGTCAATAACACGAGGAAGGTGGATGTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092576.11 ENSMUST00000109529.2 |
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| CDS CCA 72 bp | GCTTGCGGATCTTGTAGTGTTTCACATTTAGGCCCTTaGCATTGTCGAAGTCGGATACAGAGAGGCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ACGSCSVSHLGP*HCRSRIQRGSR Trigger: CCTACTGCCTCTCTGTATCCGACTTCGACAATGCCAAGGGCCTAAATGTGAAACACTACAAGATCCGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029175.14 ENSMUST00000092576.11 ENSMUST00000109529.2 ENSMUST00000109531.8 ENSMUST00000109533.8 |
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