Pregenerated sensors for SRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006050Ensembl transcript IDs: ENSMUST00000006209.5, ENSMUST00000173482.8, ENSMUST00000173875.9, ENSMUST00000236330.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAGCAGGACAGCTCCCCATGGGCGGAGGCCTGGAAGCCTTACTTaGAGGAGGTGGATGATCCACTGGAGGTGGTCCAGAAGTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSRTAPHGRRPGSLT*RRWMIHWRWSRSFW Trigger: CCAGAAACTTCTGGACCACCTCCAGTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGCCTCCGCCCATGGGGAGCTGTCCTGCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR CCA 90 bp | CAGAGGTCTCAGCACGTCTTCTATCAGAGTTTCAGACTCAATGACTaGGGAACTTGGGGGCTCCACACCAGTAGCAGGACAGCTCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: QRSQHVFYQSFRLND*GTWGLHTSSRTAPH Trigger: ATGGGGAGCTGTCCTGCTACTGGTGTGGAGCCCCCAAGTTCCCCAGTCATTGAGTCTGAAACTCTGATAGAAGACGTGCTGAGACCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR CCA 90 bp | TCAGGTGAAGTGAGTCTGGGGAGCCACAGGCATTATGATGGCTGTTaGAAGCCTGGTATTGTCTGGTTCTCAGGTTCCACTGTAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: SGEVSLGSHRHYDGC*KPGIVWFSGSTVNF Trigger: GAAATTTACAGTGGAACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATAATGCCTGTGGCTCCCCAGACTCACTTCACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR GCA 90 bp | TCCTCTTCCTGCCTCCATGTCTCAACTGTTAGGACCACAGGTGTGTaGTGCTACACTCGACAGAAATGCAGAAATCTTGTCTTTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSSCLHVSTVRTTGV*CYTRQKCRNLVFFS Trigger: GGAGAAAAAGACAAGATTTCTGCATTTCTGTCGAGTGTAGCAGCACACACCTGTGGTCCTAACAGTTGAGACATGGAGGCAGGAAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR CCA 90 bp | GGAGCAGGGAAGCTGACACCACAAAGAACCAGTCTGACATCAGAATaGCTCATCTTTCCTACCCACTTCCCACCATTGAGATGTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: GAGKLTPQRTSLTSE*LIFPTHFPPLRCLL Trigger: CAATAAACATCTCAATGGTGGGAAGTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTCAGCTTCCCTGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR GCA 90 bp | TCAACTGTTAGGACCACAGGTGTGTGCTGCTACACTCGACAGAAATaGAGAAATCTTGTCTTTTTCTCCTTCCGTTTAAATAGCAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: STVRTTGVCCYTRQK*RNLVFFSFRLNSRK Trigger: TTTTCTGCTATTTAAACGGAAGGAGAAAAAGACAAGATTTCTGCATTTCTGTCGAGTGTAGCAGCACACACCTGTGGTCCTAACAGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCAGCCCACTGTTCTCGAAGCAGCGCCAAGCGTCGGCTGATATCATCACAGGAAGTCAGGTGAAGTaGGTCTGGGGAGCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: PSSPLFSKQRQASADIITGSQVK*VWGATG Trigger: GCCTGTGGCTCCCCAGACTCACTTCACCTGACTTCC...TGTGATGATATCAGCCGACGCTTGGCGCTGCTTCGAGAACAGTGGGCTGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTCAGGACAGCTCCCCATaGGCGGAGGCCTGGAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPQDSSP*AEAWKP Trigger: AGGCTTCCAGGCCTCCGCCCATGGGGAGCTGTCCTG...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTTCCTACCCACGGAAGTCAGGTGAAGTaGGTCTGGGGAGCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LTPQRTSLTSEWLIFPTHGSQVK*VWGATG Trigger: GCCTGTGGCTCCCCAGACTCACTTCACCTGACTTCC...GTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCGGAAGTCAGGTGAAGTaGGTCTGGGGAGCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RPTRPIVSLVVKRKKKPSGSQVK*VWGATG Trigger: GCCTGTGGCTCCCCAGACTCACTTCACCTGACTTCC...GGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000173482.8 ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGGGGAGCCCTGGAAGCCTTACTTaGAGGAGGTGGATGATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KKPSTLRHRKSGEVSLGSPGSLT*RRWMIH Trigger: GTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGG...GCTCCCCAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGGGGAGCGCGCCAAGCGTCGGCTaGTATCATCACATACCTGTT | + |
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Preference number: 2 (lower is better) Translates to: KKPSTLRHRKSGEVSLGSAPSVG*YHHIPV Trigger: AACAGGTATGTGATGATATCAGCCGACGCTTGGCGC...GCTCCCCAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGTCCTCCAATGCCTGTTCCAGAGGTCTCAGCACGTCTTCTATCAGAGTATGATCCACTGGAGGTaGTCCAGAAGTTTCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: MAVLQCLFQRSQHVFYQSMIHWR*SRSFWG Trigger: GCCCCAGAAACTTCTGGACCACCTCCAGTGGATCAT...ACTCTGATAGAAGACGTGCTGAGACCTCTGGAACAGGCATTGGAGGACTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGGCATTATGATGGCTGTTGGAAGCCTGGTATTGTCTGGTTCTCAGGTGAGTTTCAGACTCAATaGCTGGGGAACTTGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SHRHYDGCWKPGIVWFSGEFQTQ*LGNLGA Trigger: AGCCCCCAAGTTCCCCAGTCATTGAGTCTGAAACTC...ACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATAATGCCTGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAGGTTCCACTGTAAATTTCTCTTCTTTGGTCTCCTCTGAAGATAGACTCCTTGAAGGAGGTGGATaGTCCACTGGAGGTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: FSGSTVNFSSLVSSEDRLLEGGG*STGGGP Trigger: TGGACCACCTCCAGTGGATCATCCACCTCCTTCAAG...GAGTCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTACAGTGGAACCTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTATTGTCTGGTTCTCAGGTTCCACTGTAAATTTCTCTTCTTTGGTCTCACCATGAGTGATCGGTaGATGTCATCTGCTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: AWYCLVLRFHCKFLFFGLTMSDR*MSSAAS Trigger: GGATGCAGCAGATGACATTCACCGATCACTCATGGT...GAGACCAAAGAAGAGAAATTTACAGTGGAACCTGAGAACCAGACAATACCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGGAAGCCTGGTATTGTCTGGTTCTCAGGTTCCACTGTAAATTTCTCTTCACCTGTTTCTTTGTGTaGCCATGGCAGTCCTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLEAWYCLVLRFHCKFLFTCFFV*PWQSSN Trigger: ATTGGAGGACTGCCATGGTCACACAAAGAAACAGGT...GAAGAGAAATTTACAGTGGAACCTGAGAACCAGACAATACCAGGCTTCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTAGTCTGACATCAGAATaGCTCATCTTTCCTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPSLTSE*LIFPTH Trigger: GTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACT...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTCATTATGATGGCTGTTaGAAGCCTGGTATTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPHYDGC*KPGIVW Trigger: CCAGACAATACCAGGCTTCCAACAGCCATCATAATG...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCACAAAGAACCAGTCTaGCATCAGAATGGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KRKKKPSTLRHRKSGEVSHKEPV*HQNGSS Trigger: AGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTG...ACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATAACCTTGAACTCCTCTTCCTGCCTCCATGTCTCAACTGTTAGGACCACAAATGTACATAACAAGTaGTCTTGCAGTGGTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SITLNSSSCLHVSTVRTTNVHNK*SCSGLD Trigger: ATCTAGACCACTGCAAGATCACTTGTTATGTACATT...TGTGGTCCTAACAGTTGAGACATGGAGGCAGGAAGAGGAGTTCAAGGTTATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAGGTTCCACTGTAAATTTCTCTTCTTTGGTCTCCTCTGAAGATAGACTCCTTCTTTACAGGTATTaGCAACTTCCCTCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSGSTVNFSSLVSSEDRLLLYRY*QLPSSP Trigger: TGGGCTGGAGGGAAGTTGTCAATACCTGTAAAGAAG...GAGTCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTACAGTGGAACCTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGCATCCAAAGACACCATaGCACAATATAAATATACCT | + |
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Preference number: 2 (lower is better) Translates to: RKKKPSTLRHRKSGEVSLHPKTP*HNINIP Trigger: AGGTATATTTATATTGTGGCATGGTGTCTTTGGATG...CAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | CATAGTTTAGGCTGTCATTATGTAGTTGTAGTACAGCATAACCTTGAACTCCTCGATACAGCAAAGGGCTaGTTTCTTCTACAGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: HSLGCHYVVVVQHNLELLDTAKG*FLLQEV Trigger: AACTTCCTGTAGAAGAAATCAGCCCTTTGCTGTATC...GAGGAGTTCAAGGTTATGCTGTACTACAACTACATAATGACAGCCTAAACTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR-3UTR TCA 90 bp | CATAGTTTAGGCTGTCATTATGTAGTTGTAGTACAGCATAACCTTGAACTCCTCAAGTTTCCAGTTGTTTaGATCTGTTCTCAGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: HSLGCHYVVVVQHNLELLKFPVV*ICSQTE Trigger: TTCAGTCTGAGAACAGATTCAAACAACTGGAAACTT...GAGGAGTTCAAGGTTATGCTGTACTACAACTACATAATGACAGCCTAAACTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR CCA 72 bp | AGGTGGATGATCCACTGGAGGTGGTCCAGAAGTTTCTaGGGCTCTAGGGGATCCATCCTGTGGGGCCGCGAC | + |
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Preference number: 3 (lower is better) Translates to: RWMIHWRWSRSF*GSRGSILWGRD Trigger: GTCGCGGCCCCACAGGATGGATCCCCTAGAGCCCCAGAAACTTCTGGACCACCTCCAGTGGATCATCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR TCA 72 bp | ACAGCTCCCCATGGGCGGAGGCCTGGAAGCCTTACTTaGAGGAGGTGGATGATCCACTGGAGGTGGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: TAPHGRRPGSLT*RRWMIHWRWSR Trigger: TCTGGACCACCTCCAGTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGCCTCCGCCCATGGGGAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR TCA 72 bp | CCACTGACTGACCTCAGTCACATGGTCAACCATGAGTaGTCGGTGAATGTCATCTGCTGCATCCCACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: PLTDLSHMVNHE*SVNVICCIPLV Trigger: CACCAGTGGGATGCAGCAGATGACATTCACCGATCACTCATGGTTGACCATGTGACTGAGGTCAGTCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR CCA 72 bp | CAGCACGTCTTCTATCAGAGTTTCAGACTCAATGACTaGGGAACTTGGGGGCTCCACACCAGTAGCAGGACA | + |
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Preference number: 3 (lower is better) Translates to: QHVFYQSFRLND*GTWGLHTSSRT Trigger: TGTCCTGCTACTGGTGTGGAGCCCCCAAGTTCCCCAGTCATTGAGTCTGAAACTCTGATAGAAGACGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR CCA 72 bp | GTGAGTCTGGGGAGCCACAGGCATTATGATGGCTGTTaGAAGCCTGGTATTGTCTGGTTCTCAGGTTCCACT | + |
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Preference number: 3 (lower is better) Translates to: VSLGSHRHYDGC*KPGIVWFSGST Trigger: AGTGGAACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATAATGCCTGTGGCTCCCCAGACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR TCA 72 bp | CAGCCCACTGTTCTCGAAGCAGCGCCAAGCGTCGGCTaGTATCATCACATACCTGTTTCTTTGTGTGACCAT | + |
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Preference number: 3 (lower is better) Translates to: QPTVLEAAPSVG*YHHIPVSLCDH Trigger: ATGGTCACACAAAGAAACAGGTATGTGATGATATCAGCCGACGCTTGGCGCTGCTTCGAGAACAGTGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CAA 90 bp | TATGATGGCTGTTGGAAGCCTGGTATTGTCTGGTTCTCAGGTTCCACTGTAAATGCCTGGAAGCCTTACTaGAAGGAGGTGGATGATCCA | + |
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Preference number: 3 (lower is better) Translates to: YDGCWKPGIVWFSGSTVNAWKPY*KEVDDP Trigger: TGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGC...ATTTACAGTGGAACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCTTCTTTACAGGTATaGACAACTTCCCTCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPSSLQV*TTSLQP Trigger: GGGCTGGAGGGAAGTTGTCAATACCTGTAAAGAAGA...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTACCCACTTCCCACCATaGAGATGTTTATTGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPTHFPP*RCLLRC Trigger: ACATCTCAATAAACATCTCAATGGTGGGAAGTGGGT...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000173482.8 ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTCAGGTTCCACTGTAAATTTCTCTTCTTTGGTCTCCTCTGAAGATAGACTCACCCACTTCCCACCATaGAGATGTTTATTGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: FSGSTVNFSSLVSSEDRLTHFPP*RCLLRC Trigger: ACATCTCAATAAACATCTCAATGGTGGGAAGTGGGT...GAGTCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTACAGTGGAACCTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| 3UTR TCA 72 bp | CAGGAAGTTTCCAGTTGTTTGAATCTGTTCTCAGACTaGAATTATATCATCCAAAGACACCATGCCACAATA | + |
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Preference number: 3 (lower is better) Translates to: QEVSSCLNLFSD*NYIIQRHHATI Trigger: TATTGTGGCATGGTGTCTTTGGATGATATAATTTCAGTCTGAGAACAGATTCAAACAACTGGAAACTTCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| 3UTR TCA 72 bp | AGGGCTGATTTCTTCTACAGGAAGTTTCCAGTTGTTTaGATCTGTTCTCAGACTGAAATTATATCATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: RADFFYRKFPVV*ICSQTEIISSK Trigger: TTTGGATGATATAATTTCAGTCTGAGAACAGATTCAAACAACTGGAAACTTCCTGTAGAAGAAATCAGCCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| CDS-3UTR CCA 90 bp | AAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGGGGAGCCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: KKPSTLRHRKSGEVSLGSPVGEL*RVVPAA Trigger: CGCGGCTGGAACGACCCGCCACAATTCTCCTACGGG...GCTCCCCAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173482.8 ENSMUST00000173875.9 |
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| CDS-3UTR CCA 90 bp | AGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: RKKKPSTLRHRKSGEVSLPVGEL*RVVPAA Trigger: CGCGGCTGGAACGACCCGCCACAATTCTCCTACGGG...CAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173482.8 ENSMUST00000173875.9 |
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| CDS-3UTR CCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGCAGGACAGCTCCCCATaGGCGGAGGCCTGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKQDSSP*AEAWKP Trigger: AGGCTTCCAGGCCTCCGCCCATGGGGAGCTGTCCTG...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS-3UTR GCA 90 bp | ACCTTGAACTCCTCTTCCTGCCTCCATGTCTCAACTGTTAGGACCACAGGTGTGATGGCAGTCCTCCAATaGCTGTTCCAGAGGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TLNSSSCLHVSTVRTTGVMAVLQ*LFQRSQ Trigger: CTGAGACCTCTGGAACAGGCATTGGAGGACTGCCAT...CACACCTGTGGTCCTAACAGTTGAGACATGGAGGCAGGAAGAGGAGTTCAAGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| CDS-3UTR CCA 90 bp | GGATCTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAAGGGGATCCATCCTGTaGGGCCGCGACCCTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GSLVKTHKTNSLPGGKKERGSIL*GRDPLS Trigger: ACTAAGAGGGTCGCGGCCCCACAGGATGGATCCCCT...TTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
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| CDS-3UTR TCA 90 bp | AAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGAGTCTGGGGAGCACCATGAGTGATCGGTaGATGTCATCTGCTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: KKPSTLRHRKSGEVSLGSTMSDR*MSSAAS Trigger: GGATGCAGCAGATGACATTCACCGATCACTCATGGT...GCTCCCCAGACTCACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGCTTGAAGGAGGTGGATaGTCCACTGGAGGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKLEGGG*STGGGP Trigger: TGGACCACCTCCAGTGGATCATCCACCTCCTTCAAG...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS-3UTR TCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTCTTGAAGGAGGTGGATaGTCCACTGGAGGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPLEGGG*STGGGP Trigger: TGGACCACCTCCAGTGGATCATCCACCTCCTTCAAG...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS-3UTR TCA 90 bp | GGATCTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAACTCCCACCATCCACTaGCTGACCTCAGTCACATGG | + |
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Preference number: 4 (lower is better) Translates to: GSLVKTHKTNSLPGGKKETPTIH*LTSVTW Trigger: CCATGTGACTGAGGTCAGTCAGTGGATGGTGGGAGT...TTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGACTCCCACCATCCACTaGCTGACCTCAGTCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKTPTIH*LTSVTW Trigger: CCATGTGACTGAGGTCAGTCAGTGGATGGTGGGAGT...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGAAGCTGACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTATGATCCACTGGAGGTaGTCCAGAAGTTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SREADTTKNQSDIRMAHLMIHWR*SRSFWG Trigger: GCCCCAGAAACTTCTGGACCACCTCCAGTGGATCAT...AAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTCAGCTTCCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CCA 90 bp | CATAGTTTAGGCTGTCATTATGTAGTTGTAGTACAGCATAACCTTGAACTCCTCCAGGACAGCTCCCCATaGGCGGAGGCCTGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGCHYVVVVQHNLELLQDSSP*AEAWKP Trigger: AGGCTTCCAGGCCTCCGCCCATGGGGAGCTGTCCTG...GAGGAGTTCAAGGTTATGCTGTACTACAACTACATAATGACAGCCTAAACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR TCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGCCTGGAAGCCTTACTTaGAGGAGGTGGATGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKPGSLT*RRWMIH Trigger: GTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGG...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | CTGACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTTCCTACCCACACCATGAGTGATCGGTaGATGTCATCTGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTPQRTSLTSEWLIFPTHTMSDR*MSSAAS Trigger: GGATGCAGCAGATGACATTCACCGATCACTCATGGT...GTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR TCA 90 bp | GACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTTCCTACCCACTTGCGCCAAGCGTCGGCTaGTATCATCACATACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DTTKNQSDIRMAHLSYPLAPSVG*YHHIPV Trigger: AACAGGTATGTGATGATATCAGCCGACGCTTGGCGC...AAGTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTGCGCCAAGCGTCGGCTaGTATCATCACATACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPAPSVG*YHHIPV Trigger: AACAGGTATGTGATGATATCAGCCGACGCTTGGCGC...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR GCA 90 bp | GGATCTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAATGGCAGTCCTCCAATaGCTGTTCCAGAGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLVKTHKTNSLPGGKKEMAVLQ*LFQRSQ Trigger: CTGAGACCTCTGGAACAGGCATTGGAGGACTGCCAT...TTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTATGATCCACTGGAGGTaGTCCAGAAGTTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPMIHWR*SRSFWG Trigger: GCCCCAGAAACTTCTGGACCACCTCCAGTGGATCAT...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGTTCAGACTCAATGACTaGGGAACTTGGGGGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKFRLND*GTWGLH Trigger: GTGGAGCCCCCAAGTTCCCCAGTCATTGAGTCTGAA...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTTCAGACTCAATGACTaGGGAACTTGGGGGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTRPIVSLVVKRKKKPFRLND*GTWGLH Trigger: GTGGAGCCCCCAAGTTCCCCAGTCATTGAGTCTGAA...AGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCACCTGACCTCAGTCACATaGTCAACCATGAGTGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: THKTNSLPGGKKEEEAFHLTSVT*STMSDR Trigger: CCGATCACTCATGGTTGACCATGTGACTGAGGTCAG...GTGGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAACCTGGAAGCCTTACTTaGAGGAGGTGGATGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVKRKKKPSTLRHRKSGEPGSLT*RRWMIH Trigger: GTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGG...TTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGGAGTTTCAGACTCAATaGCTGGGGAACTTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRKKKPSTLRHRKSGEVEFQTQ*LGNLGA Trigger: AGCCCCCAAGTTCCCCAGTCATTGAGTCTGAAACTC...CACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | AGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCCTTCTTTACAGGTATTaGCAACTTCCCTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTRPIVSLVVKRKKKPSLLYRY*QLPSSP Trigger: TGGGCTGGAGGGAAGTTGTCAATACCTGTAAAGAAG...GGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAACCACCATCCACTGACTaGCCTCAGTCACATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVKTHKTNSLPGGKKEEEPPSTD*PQSHGQ Trigger: TTGACCATGTGACTGAGGTCAGTCAGTGGATGGTGG...TTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAACCACCATCCACTGACTaGCCTCAGTCACATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVKRKKKPSTLRHRKSGEPPSTD*PQSHGQ Trigger: TTGACCATGTGACTGAGGTCAGTCAGTGGATGGTGG...TTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | AGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCACCTGTTTCTTTGTGTaGCCATGGCAGTCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTRPIVSLVVKRKKKPSTCFFV*PWQSSN Trigger: ATTGGAGGACTGCCATGGTCACACAAAGAAACAGGT...GGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | ACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCACACCTGTTTCTTTGTGTaGCCATGGCAGTCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: THKTNSLPGGKKEEEAFHTCFFV*PWQSSN Trigger: ATTGGAGGACTGCCATGGTCACACAAAGAAACAGGT...GTGGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGCTGACCTCAGTCACATaGTCAACCATGAGTGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKLTSVT*STMSDR Trigger: CCGATCACTCATGGTTGACCATGTGACTGAGGTCAG...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGTGGCTGTTGGAAGCCTaGTATTGTCTGGTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKWLLEA*YCLVLR Trigger: CCTGAGAACCAGACAATACCAGGCTTCCAACAGCCA...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | CTGACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTTCCTACCCACTCACATGGTCAACCATaGGTGATCGGTGAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTPQRTSLTSEWLIFPTHSHGQP*VIGECH Trigger: ATGACATTCACCGATCACTCATGGTTGACCATGTGA...GTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGTGGCTGTTGGAAGCCTaGTATTGTCTGGTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKRKKKPSTLRHRKSGEVWLLEA*YCLVLR Trigger: CCTGAGAACCAGACAATACCAGGCTTCCAACAGCCA...CACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAATGGTCAACCATGAGTaGTCGGTGAATGTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVKTHKTNSLPGGKKEEEMVNHE*SVNVIC Trigger: GCAGATGACATTCACCGATCACTCATGGTTGACCAT...TTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAATGGTCAACCATGAGTaGTCGGTGAATGTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVKRKKKPSTLRHRKSGEMVNHE*SVNVIC Trigger: GCAGATGACATTCACCGATCACTCATGGTTGACCAT...TTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAATCACATGGTCAACCATaGGTGATCGGTGAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVKTHKTNSLPGGKKEEESHGQP*VIGECH Trigger: ATGACATTCACCGATCACTCATGGTTGACCATGTGA...TTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| 3UTR CAA 72 bp | CCATGCCACAATATAAATATACCTTTCTGTCTAATTTaGAGAAGAGCAGGTAGCAACATAGTTATCCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PCHNINIPFCLI*RRAGSNIVIPI Trigger: GATAGGGATAACTATGTTGCTACCTGCTCTTCTCAAAATTAGACAGAAAGGTATATTTATATTGTGGCATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS TCA 90 bp | CTCCCCATGGGCGGAGGCCTGGAAGCCTTACTTGAAGGAGGTGGATaGTCCACTGGAGGTGGTCCAGAAGTTTCTGGGGCGGGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LPMGGGLEALLEGGG*STGGGPEVSGAGFT Trigger: CGTGAAGCCCGCCCCAGAAACTTCTGGACCACCTCCAGTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGCCTCCGCCCATGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236330.2 |
||
| CDS CCA 90 bp | GCGTTTGGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCGGGCTTCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: AFGSTSLSLEPVGEL*RVVPAAFLVAGLHV Trigger: TACGTGAAGCCCGGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCCAAACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006209.5 ENSMUST00000173875.9 |
||
| CDS CCA 90 bp | GCGTTTGGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCAGCTCCGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AFGSTSLSLEPVGEL*RVVPAAFLVAAPPS Trigger: AGATGGCGGAGCTGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCCAAACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCCAGCCCACTGTTCTCGAAGCAGCGCCAAGCGTCGGCTGATATCATCAGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPPAHCSRSSAKRRLISSEPVGE*WRVVPA Trigger: GGCTGGAACGACCCGCCACAATTCTCCTACGGGCTC...TGATGATATCAGCCGACGCTTGGCGCTGCTTCGAGAACAGTGGGCTGGAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTGAACTCCTCTTCCTGCCTCCATGTCTCAACTGTTAGGACCACAGGTGTGGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLNSSSCLHVSTVRTTGVEPVGE*WRVVPA Trigger: GGCTGGAACGACCCGCCACAATTCTCCTACGGGCTC...CACACCTGTGGTCCTAACAGTTGAGACATGGAGGCAGGAAGAGGAGTTCAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CAA 90 bp | ACCTTGAACTCCTCTTCCTGCCTCCATGTCTCAACTGTTAGGACCACAGGTGTGTTCCAGCCGCGTTCCTaGTTGCCGGGCTTCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TLNSSSCLHVSTVRTTGVFQPRS*LPGFTY Trigger: GTACGTGAAGCCCGGCAACAAGGAACGCGGCTGGAA...CACACCTGTGGTCCTAACAGTTGAGACATGGAGGCAGGAAGAGGAGTTCAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CAA 90 bp | AGCCACAGGCATTATGATGGCTGTTGGAAGCCTGGTATTGTCTGGTTCTCAGGTCAGCCGCGTTCCTTGTaGCAGCTCCGCCATCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SHRHYDGCWKPGIVWFSGQPRSL*QLRHLH Trigger: GTGGAGATGGCGGAGCTGCAACAAGGAACGCGGCTG...ACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATAATGCCTGTGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
||
| CDS TCA 90 bp | ACTTCCCTCCAGCCCACTGTTCTCGAAGCAGCGCCAAGCGTCGGCTaGTATCATCACATACCTTTGTGTGACCATGGCAGTCCTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TSLQPTVLEAAPSVG*YHHIPLCDHGSPPM Trigger: CATTGGAGGACTGCCATGGTCACACAAAGGTATGTGATGATATCAGCCGACGCTTGGCGCTGCTTCGAGAACAGTGGGCTGGAGGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006209.5 |
||
| CDS-3UTR CAA 90 bp | CTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGCAGCCGCGTTCCTTGTaGCCGGGCTTCACGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWSRPTRPIVSLVVKRKKQPRSL*PGFTYS Trigger: GCTGTACGTGAAGCCCGGCAACAAGGAACGCGGCTG...CTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CAA 90 bp | ACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCTTCCACTTCCAGCCGCGTTCCTaGTTGCAGCTCCGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: THKTNSLPGGKKEEEAFHFQPRS*LQLRHL Trigger: GAGATGGCGGAGCTGCAACAAGGAACGCGGCTGGAA...GTGGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAAGCCGCCTGGAAGCCTTACTaGAAGGAGGTGGATGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKTHKTNSLPGGKKEEEAAWKPY*KEVDDP Trigger: TGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGC...GGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS GCA 90 bp | GCTGATATCATCACATACCTTTGTGTGACCATGGCAGTCCTCCAATaGCTGTTCCAGAGGTCTCAGCACGTCTTCTATCAGAGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ADIITYLCVTMAVLQ*LFQRSQHVFYQSFR Trigger: TCTGAAACTCTGATAGAAGACGTGCTGAGACCTCTGGAACAGGCATTGGAGGACTGCCATGGTCACACAAAGGTATGTGATGATATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006209.5 |
||
| CDS-3UTR CAA 90 bp | GACACCACAAAGAACCAGTCTGACATCAGAATGGCTCATCTTTCCTACCCACTTTCTTCTTTACAGGTATaGACAACTTCCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DTTKNQSDIRMAHLSYPLSSLQV*TTSLQP Trigger: GGGCTGGAGGGAAGTTGTCAATACCTGTAAAGAAGA...AAGTGGGTAGGAAAGATGAGCCATTCTGATGTCAGACTGGTTCTTTGTGGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTTGGAAGCCTGGTATaGTCTGGTTCTCAGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVKRKKKPSTLRHRKSGEVGSLV*SGSQVP Trigger: TGGAACCTGAGAACCAGACAATACCAGGCTTCCAAC...TTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGAAGAATCTTCTTTACAGGTATaGACAACTTCCCTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKTHKTNSLPGGKKEEESSLQV*TTSLQP Trigger: GGGCTGGAGGGAAGTTGTCAATACCTGTAAAGAAGA...TTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CAA 90 bp | CATAGTTTAGGCTGTCATTATGTAGTTGTAGTACAGCATAACCTTGAACTCCTCGTTGGAAGCCTGGTATaGTCTGGTTCTCAGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSLGCHYVVVVQHNLELLVGSLV*SGSQVP Trigger: TGGAACCTGAGAACCAGACAATACCAGGCTTCCAAC...GAGGAGTTCAAGGTTATGCTGTACTACAACTACATAATGACAGCCTAAACTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173875.9 |
||
| CDS-3UTR CAA 90 bp | GGATCTTTGGTCAAGACCCACAAGACCAATAGTCTCCCTGGTGGTAAAAAGGAAGTAAATTTCTCTTCTTaGGTCTCCTCTGAAGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLVKTHKTNSLPGGKKEVNFSS*VSSEDR Trigger: TCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTAC...TTCCTTTTTACCACCAGGGAGACTATTGGTCTTGTGGGTCTTGACCAAAGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAAAGGAAGAAGAAGCCTTCCACACTAAGGCATAGGAAGTCAGGTGAAGTGGTAAATTTCTCTTCTTaGGTCTCCTCTGAAGATAGA | + |
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Preference number: 5 (lower is better) Translates to: VKRKKKPSTLRHRKSGEVVNFSS*VSSEDR Trigger: TCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTAC...CACTTCACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173875.9 ENSMUST00000236330.2 |
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| CDS CCA 72 bp | TCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: STSLSLEPVGEL*RVVPAAFLVAG Trigger: CCCGGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006209.5 ENSMUST00000173875.9 |
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| CDS CAA 72 bp | GGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSTSLSLEPVGE*WRVVPAAFLVA Trigger: GGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006209.5 ENSMUST00000173875.9 |
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| CDS CAA 90 bp | AGTGCGTTTGGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCCGGGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SAFGSTSLSLEPVGE*WRVVPAAFLVAGLH Trigger: GTGAAGCCCGGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCCAAACGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006209.5 ENSMUST00000173875.9 |
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| CDS CAA 90 bp | AGTGCGTTTGGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCAGCTCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SAFGSTSLSLEPVGE*WRVVPAAFLVAAPP Trigger: TGGCGGAGCTGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCCAAACGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| CDS CAA 72 bp | GGGTCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATaGTGGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSTSLSLEPVGE*WRVVPAAFLVA Trigger: TGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| CDS CCA 72 bp | TCCACCAGTCTGAGTCTGGAGCCCGTAGGAGAATTGTaGCGGGTCGTTCCAGCCGCGTTCCTTGTTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: STSLSLEPVGEL*RVVPAAFLVAA Trigger: AGCTGCAACAAGGAACGCGGCTGGAACGACCCGCCACAATTCTCCTACGGGCTCCAGACTCAGACTGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173482.8 |
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| CDS CCA 72 bp | AGGTGGATGATCCACTGGAGGTGGTCCAGAAGTTTCTaGGGCGGGCTTCACGTACAGCTCCGCCATCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RWMIHWRWSRSF*GGLHVQLRHLH Trigger: GTGGAGATGGCGGAGCTGTACGTGAAGCCCGCCCCAGAAACTTCTGGACCACCTCCAGTGGATCATCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236330.2 |
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| CDS TCA 72 bp | CAGCCCACTGTTCTCGAAGCAGCGCCAAGCGTCGGCTaGTATCATCACATACCTTTGTGTGACCATGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QPTVLEAAPSVG*YHHIPLCDHGS Trigger: ACTGCCATGGTCACACAAAGGTATGTGATGATATCAGCCGACGCTTGGCGCTGCTTCGAGAACAGTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006209.5 |
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| CDS GCA 72 bp | ATCACATACCTTTGTGTGACCATGGCAGTCCTCCAATaGCTGTTCCAGAGGTCTCAGCACGTCTTCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: ITYLCVTMAVLQ*LFQRSQHVFYQ Trigger: CTGATAGAAGACGTGCTGAGACCTCTGGAACAGGCATTGGAGGACTGCCATGGTCACACAAAGGTATGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006209.5 |
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