Pregenerated sensors for SQSTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015837Ensembl transcript IDs: ENSMUST00000015981.12, ENSMUST00000102774.11, ENSMUST00000136936.2, ENSMUST00000143379.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTaGGAGTGCAGTGTGTGCTGCAGTTCCCTGCAGAGGCCAGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: AGILDCWCNAGGKSR*ECSVCCSSLQRPGL Trigger: TAGGCCTGGCCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR TCA 90 bp | GCCTCCTCAAGCCATTCACACTACCACCCCACAACTGGACAGACCTaGCAGGAAGACCCGAGAGCAGCCAAGGGACATGGGGACTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: ASSSHSHYHPTTGQT*QEDPRAAKGHGDSS Trigger: CGAGGAGTCCCCATGTCCCTTGGCTGCTCTCGGGTCTTCCTGTCAGGTCTGTCCAGTTGTGGGGTGGTAGTGTGAATGGCTTGAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR GCA 90 bp | ATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTaGAGTGTGTGCTGCAGTTCCCTGCAGAGGCCAGGCCTAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ILDCWCNAGGKSRWE*SVCCSSLQRPGLGK Trigger: TTTCCCTAGGCCTGGCCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR GCA 90 bp | TGTTCTGTGTCCCTCAATGCCAGTCCTCCTTGTCACAGACTGGGGTaGTCTGGAACAAATAACCCAACAATAAACGTGCCTGTCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: CSVSLNASPPCHRLG*SGTNNPTINVPVNR Trigger: TCTGTTGACAGGCACGTTTATTGTTGGGTTATTTGTTCCAGAGCACCCCAGTCTGTGACAAGGAGGACTGGCATTGAGGGACACAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 90 bp | TTACACAAGTTAATGCCCCATCTTCTAAATGGGCACGGTTTCTCCTaGCACCTGGAAATAGTCCTCAAGTGGATGAGAAACCAAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LHKLMPHLLNGHGFS*HLEIVLKWMRNQVL Trigger: GAGGACTTGGTTTCTCATCCACTTGAGGACTATTTCCAGGTGCCAGGAGAAACCGTGCCCATTTAGAAGATGGGGCATTAACTTGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR GCA 90 bp | CGTCAGCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTaGCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGA | + |
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Preference number: 1 (lower is better) Translates to: RQHMHIQNSPHALSY*LKRHHTFPPEDSTR Trigger: TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGCTGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR GCA 90 bp | TTGCTGCTACACTCGTACGGATCACAGGGCTGGTTAAAGTGCATATaGCATTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LLLHSYGSQGWLKCI*HFITGYLQTKSEEA Trigger: AGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAATGGCATATGCACTTTAACCAGCCCTGTGATCCGTACGAGTGTAGCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACAGTCCCCTCTTGGAATTCTGGACTGCTaGTGCAATGCTGGCGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GAVGPCLPPFTHYGQSPLGILDC*CNAGGK Trigger: CTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCC...AAGAGGGGACTGTCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTGGCTCAAGGGACCCAGAAGGCTCCACCCTTGCAACTGCACAACCTCTTGGAATTCTGGACTGCTaGTGCAATGCTGGCGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AFGSRDPEGSTLATAQPLGILDC*CNAGGK Trigger: CTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCC...AAGAGGTTGTGCAGTTGCAAGGGTGGAGCCTTCTGGGTCCCTTGAGCCAAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR GCA 90 bp | GCACCTGGAAATAGTCCTCAAGTGGATGAGAAACCAAGTCCTCTGCAGGAGGCCAAGAGCAGGTGGGAGTaGAGTGTGTGCTGCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: APGNSPQVDEKPSPLQEAKSRWE*SVCCSS Trigger: GGAACTGCAGCACACACTGCACTCCCACCTGCTCTT...GGCCTCCTGCAGAGGACTTGGTTTCTCATCCACTTGAGGACTATTTCCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTACACAAGTTAATGCCCCATCTTCTAAATGGGCACGGTTTCTCCTGGCATGGGAGTGCAGTGTGTaGTGCAGTTCCCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVTQVNAPSSKWARFLLAWECSV*CSSLQR Trigger: CCTCTGCAGGGAACTGCAGCACACACTGCACTCCCA...TGCCAGGAGAAACCGTGCCCATTTAGAAGATGGGGCATTAACTTGTGTAACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR CCA 90 bp | CACAACTGGACAGACCTGACAGGAAGACCCGAGAGCAGCCAAGGGACATGGGGAACAAACACTAAAGAGTaGCCATTAGAAAGGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: HNWTDLTGRPESSQGTWGTNTKE*PLERGT Trigger: TGTCCCCCTTTCTAATGGCCACTCTTTAGTGTTTGT...TCCCCATGTCCCTTGGCTGCTCTCGGGTCTTCCTGTCAGGTCTGTCCAGTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR GCA 90 bp | CACAACTGGACAGACCTGACAGGAAGACCCGAGAGCAGCCAAGGGACATGGGGATCAAAACTCTCCTCATaGACTTTCCTATTGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HNWTDLTGRPESSQGTWGSKLSS*TFLLPE Trigger: TTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGA...TCCCCATGTCCCTTGGCTGCTCTCGGGTCTTCCTGTCAGGTCTGTCCAGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR-3UTR GCA 90 bp | ATTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTTGGGAGTGCAGTGTGTaGTGCAGTTCCCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ILLQVTYKPSQRKLHGGPWECSV*CSSLQR Trigger: CCTCTGCAGGGAACTGCAGCACACACTGCACTCCCA...AGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTTCACACATTCCCACCTaGAGATTCTACAAGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: ITGYLQTKSEEATWGSCASHIPT*RFYKNA Trigger: GGCATTCTTGTAGAATCTTCAGGTGGGAATGTGTGA...AGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTCATGCACTTTCCTATTaGCTGAAAAGGCATCACACA | + |
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Preference number: 2 (lower is better) Translates to: ITGYLQTKSEEATWGSCAHALSY*LKRHHT Trigger: TGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATG...AGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR-3UTR GCA 90 bp | TATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTCAAAACTCTCCTCATaGACTTTCCTATTGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: YYRLLTNQVRGSYMGVLCSKLSS*TFLLPE Trigger: TTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGA...GCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGACAAACACTAAAGAGTaGCCATTAGAAAGGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: FYYRLLTNQVRGSYMGVLTNTKE*PLERGT Trigger: TGTCCCCCTTTCTAATGGCCACTCTTTAGTGTTTGT...CAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR GCA 72 bp | TGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTaGAGTGTGTGCTGCAGTTCCCTGCAGAGGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: CWCNAGGKSRWE*SVCCSSLQRPG Trigger: GCCTGGCCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR CCA 72 bp | CTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTaGGAGTGCAGTGTGTGCTGCAGTTCCCTGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LDCWCNAGGKSR*ECSVCCSSLQR Trigger: CCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR GCA 72 bp | GGGTTGTCAGGCAGGAATTCTGGACTGCTGGTGCAATaGTGGCGGCAAGAGCAGGTGGGAGTGCAGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: GLSGRNSGLLVQ*WRQEQVGVQCV Trigger: CACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR CCA 72 bp | GGAAACACGGGTTGTCAGGCAGGAATTCTGGACTGCTaGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: GNTGCQAGILDC*CNAGGKSRWEC Trigger: GCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACAACCCGTGTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR CCA 72 bp | TTGTCAGGCAGGAATTCTGGACTGCTGGTGCAATGCTaGCGGCAAGAGCAGGTGGGAGTGCAGTGTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LSGRNSGLLVQC*RQEQVGVQCVL Trigger: CAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR CCA 72 bp | GGCCTCCTCAAGCCATTCACACTACCACCCCACAACTaGACAGACCTGACAGGAAGACCCGAGAGCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: GLLKPFTLPPHN*TDLTGRPESSQ Trigger: TTGGCTGCTCTCGGGTCTTCCTGTCAGGTCTGTCCAGTTGTGGGGTGGTAGTGTGAATGGCTTGAGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 72 bp | GGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTaGGTCTGTTCTCAGGCGTCAGCATATGCACATTCA | + |
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Preference number: 3 (lower is better) Translates to: GKQRKLSSATGT*VCSQASAYAHS Trigger: TGAATGTGCATATGCTGACGCCTGAGAACAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR GCA 72 bp | TGGCTCAAGGGACCCAGAAGGCTCCACCCTTGCAACTaGACAACCTCTTTACAACCGGAGAGGACTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: WLKGPRRLHPCN*TTSLQPERTLM Trigger: CATCAAAGTCCTCTCCGGTTGTAAAGAGGTTGTGCAGTTGCAAGGGTGGAGCCTTCTGGGTCCCTTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 72 bp | CACGGTTTCTCCTGGCACCTGGAAATAGTCCTCAAGTaGATGAGAAACCAAGTCCTCTGCAGGAGGCCACCA | + |
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Preference number: 3 (lower is better) Translates to: HGFSWHLEIVLK*MRNQVLCRRPP Trigger: TGGTGGCCTCCTGCAGAGGACTTGGTTTCTCATCCACTTGAGGACTATTTCCAGGTGCCAGGAGAAACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 72 bp | AATGAGCGCTTTCTCTGCTTACTTTCAGGACTCCACTaGCCTGTTTGGAACAGAGCAGCAAGGCACCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: NERFLCLLSGLH*PVWNRAARHQP Trigger: GGGCTGGTGCCTTGCTGCTCTGTTCCAAACAGGCCAGTGGAGTCCTGAAAGTAAGCAGAGAAAGCGCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR TCA 72 bp | TGCAGAAAGCAGGGTTTGCTGAGCATCCTGCCAAGCTaGATGAGCGCTTTCTCTGCTTACTTTCAGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: CRKQGLLSILPS*MSAFSAYFQDS Trigger: GGAGTCCTGAAAGTAAGCAGAGAAAGCGCTCATTCAGCTTGGCAGGATGCTCAGCAAACCCTGCTTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 72 bp | TTAATGCCCCATCTTCTAAATGGGCACGGTTTCTCCTaGCACCTGGAAATAGTCCTCAAGTGGATGAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: LMPHLLNGHGFS*HLEIVLKWMRN Trigger: GTTTCTCATCCACTTGAGGACTATTTCCAGGTGCCAGGAGAAACCGTGCCCATTTAGAAGATGGGGCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR CCA 72 bp | AGTCCTGTTACACAAGTTAATGCCCCATCTTCTAAATaGGCACGGTTTCTCCTGGCACCTGGAAATAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SPVTQVNAPSSK*ARFLLAPGNSP Trigger: AGGACTATTTCCAGGTGCCAGGAGAAACCGTGCCCATTTAGAAGATGGGGCATTAACTTGTGTAACAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR TCA 72 bp | TTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTaGAGATTCTACAAGAATGCCAAGACACTGGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: FLLPEKASHIPT*RFYKNAKTLGL Trigger: TAGGCCCAGTGTCTTGGCATTCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| 3UTR CCA 72 bp | GTCCTCTTGCTGCTACACTCGTACGGATCACAGGGCTaGTTAAAGTGCATATGCCATTTTATTACAGGTTAC | + |
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Preference number: 3 (lower is better) Translates to: VLLLLHSYGSQG*LKCICHFITGY Trigger: GTAACCTGTAATAAAATGGCATATGCACTTTAACCAGCCCTGTGATCCGTACGAGTGTAGCAGCAAGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| 3UTR GCA 72 bp | CAGGCGTCAGCATATGCACATTCAAAACTCTCCTCATaGACTTTCCTATTGCCTGAAAAGGCATCACACATT | + |
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Preference number: 3 (lower is better) Translates to: QASAYAHSKLSS*TFLLPEKASHI Trigger: AATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGCTGACGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| 3UTR CCA 72 bp | ACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATaGGGGTCCTGTGCTTTAAGCATTAACATTAGACAC | + |
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Preference number: 3 (lower is better) Translates to: TGYLQTKSEEAT*GSCALSINIRH Trigger: GTGTCTAATGTTAATGCTTAAAGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCGGCAAGAGCAGGTGGGAGTGCAGTGTGTGCTGCAGTTCCCTGCAGAGGTGCTCTGTCAGAGACTaGGCAGGGCCCTCCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AGGKSRWECSVCCSSLQRCSVRD*AGPSPA Trigger: GGCTGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCA...CCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCGGCAAGAGCAGGTGGGAGTGCAGTGTGTGCTGCAGTTCCCTGCAGAGGCCCCGTCAGGTTTGCTaGCTTCCGAAGAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGGKSRWECSVCCSSLQRPRQVC*LPKSSC Trigger: GCAGCTGCTCTTCGGAAGTCAGCAAACCTGACGGGG...CCTCTGCAGGGAACTGCAGCACACACTGCACTCCCACCTGCTCTTGCCGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTGCATGCTCTGTCAGAGACTaGGCAGGGCCCTCCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QEFWTAGAMLAARAGGSACSVRD*AGPSPA Trigger: GGCTGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCA...TGCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS-3UTR GCA 90 bp | CAGTTCCCTGCAGAGGCCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCATCCCCTCGCACACGCTaGACAGGTCGTAGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QFPAEARPRESRGSSAQPSPRTR*TGRSLG Trigger: GCCCAGACTACGACCTGTGCAGCGTGTGCGAGGGGA...TGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGGCCTCTGCAGGGAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR TCA 90 bp | AGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGTTTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCG | + |
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Preference number: 4 (lower is better) Translates to: RPRESRGSSAQPRVPGSVSVGAW*ASRLHP Trigger: CGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGA...AACAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS-3UTR CCA 90 bp | GGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACAGTCCCCTCTTCTCCTGAGCACATGGTaGGCGATGTTCCCGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GAVGPCLPPFTHYGQSPLLLSTW*AMFPPA Trigger: TGCCGGCGGGAACATCGCCCACCATGTGCTCAGGAG...AAGAGGGGACTGTCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGACCCGAGAGCAGCCAAGGGACATGGGGACTCCTCGAGCAGATGGTATGCCTCCTGAGCACATaGTGGGCGATGTTCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: TGRPESSQGTWGLLEQMVCLLST*WAMFPP Trigger: CGGCGGGAACATCGCCCACCATGTGCTCAGGAGGCA...TACCATCTGCTCGAGGAGTCCCCATGTCCCTTGGCTGCTCTCGGGTCTTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGCTTCCTTCAGCCCTGTaGGTCCTTCCTGTGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PGLGKAEEAQLSHGYLGLLPSAL*VLPVRG Trigger: ACCCCTCACAGGAAGGACCCACAGGGCTGAAGGAAG...CAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102774.11 |
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| CDS-3UTR GCA 90 bp | CAGTTCCCTGCAGAGGCCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCAGGGTCGCCTCCTCCTTaGCCAGAAGATAGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QFPAEARPRESRGSSAQPGSPPP*PEDRPS Trigger: TGAAGGCCTATCTTCTGGGCAAGGAGGAGGCGACCC...TGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGGCCTCTGCAGGGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR GCA 90 bp | CTCCATTCCCTAGGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGATCCCCTCGCACACGCTaGACAGGTCGTAGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LHSLGAVGPCLPPFTHYGSPRTR*TGRSLG Trigger: GCCCAGACTACGACCTGTGCAGCGTGTGCGAGGGGA...TCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCCTAGGGAATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR TCA 90 bp | GGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACAGTCCCCTCTTTGGTGGAGCAGAAGCTaGCTCAGCTGTAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAVGPCLPPFTHYGQSPLWWSRS*LSCRAR Trigger: CCTTGCCCTACAGCTGAGTCAGCTTCTGCTCCACCA...AAGAGGGGACTGTCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGCCACCACAGGCCCGTTaGAACCATCACAGATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLGKAEEAQLSHGYLGLPPQAR*NHHRSH Trigger: ATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGG...CAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTGCTGTGCTGGAACTTTCTaGGGTAGTGGGTGTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGILDCWCNAGGKSRWECCAGTF*GSGCQA Trigger: CGCCTGACACCCACTACCCCAGAAAGTTCCAGCACA...GCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTGCGGGTGCTTCGAATACTaGATCGTGTCCAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGILDCWCNAGGKSRWECGCFEY*IVSRAA Trigger: GGCTGCTCTGGACACGATCCAGTATTCGAAGCACCC...GCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCCTGCAGAGGCCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCAAGGGGTTGGGAAAGATaGGCTTGCTGTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFPAEARPRESRGSSAQPRGWER*ACCVPC Trigger: ACAGGGAACACAGCAAGCTCATCTTTCCCAACCCCT...TGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGGCCTCTGCAGGGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGTGCAGGGGTTGGGAAAGATaGGCTTGCTGTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGILDCWCNAGGKSRWECRGWER*ACCVPC Trigger: ACAGGGAACACAGCAAGCTCATCTTTCCCAACCCCT...GCACTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR TCA 90 bp | GCACCTGGAAATAGTCCTCAAGTGGATGAGAAACCAAGTCCTCTGCAGGAGGCCTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: APGNSPQVDEKPSPLQEASVGAW*ASRLHP Trigger: CGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGA...GGCCTCCTGCAGAGGACTTGGTTTCTCATCCACTTGAGGACTATTTCCAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACAGTCCCCTCTTCTCCATCTGTTCCTCTaGCTGTCCCACCGACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GAVGPCLPPFTHYGQSPLLHLFL*LSHRLQ Trigger: TTGGAGTCGGTGGGACAGCCAGAGGAACAGATGGAG...AAGAGGGGACTGTCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | TGTCAGGCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGGGTGCTTCGAATACTaGATCGTGTCCAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQAGILDCWCNAGGKSRWGCFEY*IVSRAA Trigger: GGCTGCTCTGGACACGATCCAGTATTCGAAGCACCC...CCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| 3UTR CAA 72 bp | AGGCCTTTGGCTCAAGGGACCCAGAAGGCTCCACCCTaGCAACTGCACAACCTCTTTACAACCGGAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLAQGTQKAPP*QLHNLFTTGED Trigger: GTCCTCTCCGGTTGTAAAGAGGTTGTGCAGTTGCAAGGGTGGAGCCTTCTGGGTCCCTTGAGCCAAAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCACTGTTCTGTGTCCCTCAATGCCAGTCCTCCTTGTCACAGACTGGGGCGAAGCCAGCGGCTATaGGAGAAGCTATCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHCSVSLNASPPCHRLGRSQRL*EKLSER Trigger: CCTCTCTGATAGCTTCTCTCATAGCCGCTGGCTTCG...CCCCAGTCTGTGACAAGGAGGACTGGCATTGAGGGACACAGAACAGTGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR GCA 90 bp | AGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGTTCTTCCGAAGAGCAGCTaGTTGGCTGAGTGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPRESRGSSAQPRVPGSVLPKSS*LAECYS Trigger: AGAGTAACACTCAGCCAAGCAGCTGCTCTTCGGAAG...AACAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGTTGCACAGGTCGTAGTCTaGGCACACACTGCACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: RPRESRGSSAQPRVPGSVAQVVV*AHTALI Trigger: TATAAGTGCAGTGTGTGCCCAGACTACGACCTGTGC...AACAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACAGTCCCCTCTTGGCATCTGTAGAGACTaGAGTTCACCTGTAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAVGPCLPPFTHYGQSPLGICRD*SSPVDG Trigger: CCCATCTACAGGTGAACTCCAGTCTCTACAGATGCC...AAGAGGGGACTGTCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAATGCACGAGGAGGACGTaGGCTCCAGTTCCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHALSYCLKRHHTFPPECTRRT*APVPRW Trigger: CCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCA...TTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | GCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACTGCTCTGTCAGAGACTaGGCAGGGCCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSKLSSCTFLLPEKASHCSVRD*AGPSPA Trigger: GGCTGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCA...GTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTTTAAGTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLLTNQVRGSYMGVLCFKSVGAW*ASRLHP Trigger: CGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGA...CTTAAAGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAATCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPHALSYCLKRHHTFPPESVGAW*ASRLHP Trigger: CGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGA...TTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | CTATCTATAGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTTTGCTGTGTTCCCTGTaGAGGCCCTTCCCCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIEALLLYVMQLQDKGGLLCSL*RPFPSH Trigger: GTGCGAGGGGAAGGGCCTGCACAGGGAACACAGCAA...ACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCTATAGATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR GCA 90 bp | GCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCAAGGGCGGCCATCCCCTaGACGAGGAGGACGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYAHSKLSSCTFLLPEKARAAIP*TRRTWA Trigger: AGCCCACGTCCTCCTCGTGCAGGGGATGGCCGCCCT...TGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACAGGGCGGCCATCCCCTaGACGAGGAGGACGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHIQNSPHALSYCLKRHHRAAIP*TRRTWA Trigger: AGCCCACGTCCTCCTCGTGCAGGGGATGGCCGCCCT...GTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTTGCCTCCTGAGCACATaGTGGGCGATGTTCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSPHALSYCLKRHHTFPPCLLST*WAMFPP Trigger: CGGCGGGAACATCGCCCACCATGTGCTCAGGAGGCA...AGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGCCTCCTGAGCACATaGTGGGCGATGTTCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTCLLST*WAMFPP Trigger: CGGCGGGAACATCGCCCACCATGTGCTCAGGAGGCA...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | TTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGTGCACGAGGAGGACGTaGGCTCCAGTTCCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQVTYKPSQRKLHGGPVCTRRT*APVPRW Trigger: CCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCA...CACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR TCA 90 bp | ATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTCCCCGTCAGGTTTGCTaGCTTCCGAAGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITGYLQTKSEEATWGSCAPRQVC*LPKSSC Trigger: GCAGCTGCTCTTCGGAAGTCAGCAAACCTGACGGGG...AGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGATGCTCTGTCAGAGACTaGGCAGGGCCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSYCLKRHHTFPPEDSTRCSVRD*AGPSPA Trigger: GGCTGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCA...TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | GCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACTCCCCTCGCACACGCTaGACAGGTCGTAGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHSKLSSCTFLLPEKASHSPRTR*TGRSLG Trigger: GCCCAGACTACGACCTGTGCAGCGTGTGCGAGGGGA...GTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTTTAAGTTGCTGTGTTCCCTGTaGAGGCCCTTCCCCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLTNQVRGSYMGVLCFKLLCSL*RPFPSH Trigger: GTGCGAGGGGAAGGGCCTGCACAGGGAACACAGCAA...CTTAAAGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR GCA 90 bp | AACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTTTGCTGTGTTCCCTGTaGAGGCCCTTCCCCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSPHALSYCLKRHHTFPPLLCSL*RPFPSH Trigger: GTGCGAGGGGAAGGGCCTGCACAGGGAACACAGCAA...AGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTAGGGCGGCCATCCCCTaGACGAGGAGGACGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLQVTYKPSQRKLHGGPRAAIP*TRRTWA Trigger: AGCCCACGTCCTCCTCGTGCAGGGGATGGCCGCCCT...AGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | CATTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGCACGAGGAGGACGTaGGCTCCAGTTCCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HFITGYLQTKSEEATWGSCTRRT*APVPRW Trigger: CCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCA...GGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | CCTATCTATAGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGGGGTGCTTCGAATACTaGATCGTGTCCAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIYRSPAALRDATTRQRGGCFEY*IVSRAA Trigger: GGCTGCTCTGGACACGATCCAGTATTCGAAGCACCC...CCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCTATAGATAGG 52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGGTGGAGCAGAAGCTaGCTCAGCTGTAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTWWSRS*LSCRAR Trigger: CCTTGCCCTACAGCTGAGTCAGCTTCTGCTCCACCA...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCCACCATGTTTCGGGGTaGCTCCTGAGCACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTHHVSG*LLSTWW Trigger: CCACCATGTGCTCAGGAGGCACCCCGAAACATGGTG...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATTTGTTAAAGGGATTGGTGGTGGTTATGCAGAAAGCAGGGTTTGCTGAGCTCCTGAGCACATGGTaGGCGATGTTCCCGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLLKGLVVVMQKAGFAELLSTW*AMFPPA Trigger: TGCCGGCGGGAACATCGCCCACCATGTGCTCAGGAG...CTCAGCAAACCCTGCTTTCTGCATAACCACCACCAATCCCTTTAACAAATCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGACCCCGTCAGGTTTGCTaGCTTCCGAAGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYCLKRHHTFPPEDSTRPRQVC*LPKSSC Trigger: GCAGCTGCTCTTCGGAAGTCAGCAAACCTGACGGGG...TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | GCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCACCCCGTCAGGTTTGCTaGCTTCCGAAGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AYAHSKLSSCTFLLPEKAPRQVC*LPKSSC Trigger: GCAGCTGCTCTTCGGAAGTCAGCAAACCTGACGGGG...TGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | TTAATGCCCCATCTTCTAAATGGGCACGGTTTCTCCTGGCACCTGGAAATAGTCCCACCACAGGCCCGTTaGAACCATCACAGATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LMPHLLNGHGFSWHLEIVPPQAR*NHHRSH Trigger: ATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGG...GACTATTTCCAGGTGCCAGGAGAAACCGTGCCCATTTAGAAGATGGGGCATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR CCA 90 bp | TATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCCTCCATCTGTTCCTCTaGCTGTCCCACCGACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YYRLLTNQVRGSYMGVLCLHLFL*LSHRLQ Trigger: TTGGAGTCGGTGGGACAGCCAGAGGAACAGATGGAG...GCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCGGGTGCTTCGAATACTaGATCGTGTCCAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTGCFEY*IVSRAA Trigger: GGCTGCTCTGGACACGATCCAGTATTCGAAGCACCC...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGACAGTATAAGATAAGATCCTTCATTCGGCTTCACATGAATTCTCCATTCGGGTCGCCTCCTCCTTaGCCAGAAGATAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGQYKIRSFIRLHMNSPFGSPPP*PEDRPS Trigger: TGAAGGCCTATCTTCTGGGCAAGGAGGAGGCGACCC...GAATGGAGAATTCATGTGAAGCCGAATGAAGGATCTTATCTTATACTGTCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAACCACCACAGGCCCGTTaGAACCATCACAGATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHALSYCLKRHHTFPPEPPQAR*NHHRSH Trigger: ATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGG...TTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | CTATCTATAGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTGCACAGGTCGTAGTCTaGGCACACACTGCACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: LSIEALLLYVMQLQDKGGAQVVV*AHTALI Trigger: TATAAGTGCAGTGTGTGCCCAGACTACGACCTGTGC...ACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCTATAGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACTGTGCTGGAACTTTCTaGGGTAGTGGGTGTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHSKLSSCTFLLPEKASHCAGTF*GSGCQA Trigger: CGCCTGACACCCACTACCCCAGAAAGTTCCAGCACA...GTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTTGTCACAGACTGGGGTGCTCTGGAACAAATAACCCAACAATAAACGTGCGAAGAGCAGCTGCTTaGCTGAGTGTTACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPCHRLGCSGTNNPTINVRRAAA*LSVTLV Trigger: GACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCG...CACGTTTATTGTTGGGTTATTTGTTCCAGAGCACCCCAGTCTGTGACAAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| 3UTR CAA 72 bp | TGCAACTGCACAACCTCTTTACAACCGGAGAGGACTTaGATGATGACCTGTAGCCTTCACTGTTCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CNCTTSLQPERT*MMTCSLHCSVS Trigger: GGACACAGAACAGTGAAGGCTACAGGTCATCATCAAAGTCCTCTCCGGTTGTAAAGAGGTTGTGCAGTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR TCA 90 bp | CAGCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCGAAGCCAGCGGCTATaGGAGAAGCTATCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHMHIQNSPHALSYCLKRRSQRL*EKLSER Trigger: CCTCTCTGATAGCTTCTCTCATAGCCGCTGGCTTCG...CCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | TATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCATGGTGGAGCAGAAGCTaGCTCAGCTGTAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YAHSKLSSCTFLLPEKASWWSRS*LSCRAR Trigger: CCTTGCCCTACAGCTGAGTCAGCTTCTGCTCCACCA...TGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | TATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCAGGGTCGCCTCCTCCTTaGCCAGAAGATAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YAHSKLSSCTFLLPEKASGSPPP*PEDRPS Trigger: TGAAGGCCTATCTTCTGGGCAAGGAGGAGGCGACCC...TGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | CATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACCATGTTTCGGGGTaGCTCCTGAGCACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMHIQNSPHALSYCLKRHHHVSG*LLSTWW Trigger: CCACCATGTGCTCAGGAGGCACCCCGAAACATGGTG...ATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR GCA 90 bp | AACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTCTTCCGAAGAGCAGCTaGTTGGCTGAGTGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSPHALSYCLKRHHTFPPLPKSS*LAECYS Trigger: AGAGTAACACTCAGCCAAGCAGCTGCTCTTCGGAAG...AGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTCAGCTCCTCATCACTaGAAAAGGCAACCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTSAPHH*KRQPSP Trigger: GGGACTTGGTTGCCTTTTCCAGTGATGAGGAGCTGA...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAACATCACAGATCACATTaGGGTGCACCATGTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHALSYCLKRHHTFPPEHHRSH*GAPCFG Trigger: CCCGAAACATGGTGCACCCCAATGTGATCTGTGATG...TTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTCATCACAGATCACATTaGGGTGCACCATGTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPHALSYCLKRHHTFPPHHRSH*GAPCFG Trigger: CCCGAAACATGGTGCACCCCAATGTGATCTGTGATG...AGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCGCACAGGTCGTAGTCTaGGCACACACTGCACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTAQVVV*AHTALI Trigger: TATAAGTGCAGTGTGTGCCCAGACTACGACCTGTGC...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGACAGTATAAGATAAGATCCTTCATTCGGCTTCACATGAATTCTCCATTCTGTGCTGGAACTTTCTaGGGTAGTGGGTGTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGQYKIRSFIRLHMNSPFCAGTF*GSGCQA Trigger: CGCCTGACACCCACTACCCCAGAAAGTTCCAGCACA...GAATGGAGAATTCATGTGAAGCCGAATGAAGGATCTTATCTTATACTGTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | TATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCCGAAGAGCAGCTGCTTaGCTGAGTGTTACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YYRLLTNQVRGSYMGVLCRRAAA*LSVTLV Trigger: GACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCG...GCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCCGAAGAGCAGCTGCTTaGCTGAGTGTTACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTRRAAA*LSVTLV Trigger: GACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCG...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGAAGGGGTTGGGAAAGATaGGCTTGCTGTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSYCLKRHHTFPPEDSTRRGWER*ACCVPC Trigger: ACAGGGAACACAGCAAGCTCATCTTTCCCAACCCCT...TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | CTATCTATAGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTTGGGTCCACTTCTTTTaGAGACAAATGTGTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSIEALLLYVMQLQDKGGWVHFF*RQMCPV Trigger: GACTGGACACATTTGTCTTCAAAAGAAGTGGACCCA...ACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCTATAGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACTCAGCTCCTCATCACTaGAAAAGGCAACCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSKLSSCTFLLPEKASHSAPHH*KRQPSP Trigger: GGGACTTGGTTGCCTTTTCCAGTGATGAGGAGCTGA...GTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCGCACTATCACAATGGTaGAGGGTGCTTCGAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTALSQW*RVLRIL Trigger: CAGTATTCGAAGCACCCTCCACCATTGTGATAGTGC...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGGGTCCACTTCTTTTaGAGACAAATGTGTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSCTFLLPEKASHIPTWVHFF*RQMCPV Trigger: GACTGGACACATTTGTCTTCAAAAGAAGTGGACCCA...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | ATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACTCAGCTCCTCATCACTaGAAAAGGCAACCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHIQNSPHALSYCLKRHHSAPHH*KRQPSP Trigger: GGGACTTGGTTGCCTTTTCCAGTGATGAGGAGCTGA...GTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCCATCACAGATCACATTaGGGTGCACCATGTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFITGYLQTKSEEATWGSHHRSH*GAPCFG Trigger: CCCGAAACATGGTGCACCCCAATGTGATCTGTGATG...GGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS-3UTR CCA 90 bp | GGGGGACAGTATAAGATAAGATCCTTCATTCGGCTTCACATGAATTCTCCATTCCGAAGAGCAGCTGCTTaGCTGAGTGTTACTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGQYKIRSFIRLHMNSPFRRAAA*LSVTLV Trigger: GACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCG...GAATGGAGAATTCATGTGAAGCCGAATGAAGGATCTTATCTTATACTGTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR GCA 90 bp | TATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACTTCCGAAGAGCAGCTaGTTGGCTGAGTGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YAHSKLSSCTFLLPEKASLPKSS*LAECYS Trigger: AGAGTAACACTCAGCCAAGCAGCTGCTCTTCGGAAG...TGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | ACTCGGCTCAGCAGCCTCTCGCAGGGCCCCGGGCCGGCCGCGGCTTaGGCTTCCGCCTCCGGCTCCGGGCTGAAGCAGAAGCTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLSSLSQGPGPAAA*ASASGSGLKQKLKR Trigger: CCGCTTCAGCTTCTGCTTCAGCCCGGAGCCGGAGGCGGAAGCCCAAGCCGCGGCCGGCCCGGGGCCCTGCGAGAGGCTGCTGAGCCGAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | CTCAGCTGTAGGGCAAGGGCGGCCATCCCCTGCACGAGGAGGACGTaGGCTCCAGTTCCCCGGTGGGCCCATCTCCCAGCCAGGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSCRARAAIPCTRRT*APVPRWAHLPARPA Trigger: GGCTGGCCTGGCTGGGAGATGGGCCCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCAGGGGATGGCCGCCCTTGCCCTACAGCTGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | GCGGCCATCCCCTGCACGAGGAGGACGTGGGCTCCAGTTCCCCGGTaGGCCCATCTCCCAGCCAGGCCAGCCAAAGTGTCCATGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAIPCTRRTWAPVPR*AHLPARPAKVSMFQ Trigger: CTGAAACATGGACACTTTGGCTGGCCTGGCTGGGAGATGGGCCCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCAGGGGATGGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | CTGGTGAGCCAGCCGCCTTCATCCGAGAAACCCATGGACAGCATCTaGGAGAGGGACTCAATCAGCCGGGGATCAGCCTCTGGTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSQPPSSEKPMDSI*ERDSISRGSASGGR Trigger: TCTCCCACCAGAGGCTGATCCCCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS GCA 90 bp | CCTTCCCCTCGCACACGCTGCACAGGTCGTAGTCTGGGCACACACTaGACTTATAGCGAGTTCCCACCACAGGCCCGTTGCAACCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRTRCTGRSLGTH*TYSEFPPQARCNHH Trigger: GTGATGGTTGCAACGGGCCTGTGGTGGGAACTCGCTATAAGTGCAGTGTGTGCCCAGACTACGACCTGTGCAGCGTGTGCGAGGGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | AGCGAGTTCCCACCACAGGCCCGTTGCAACCATCACAGATCACATTaGGGTGCACCATGTTTCGGGGTGCCTCCTGAGCACATGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEFPPQARCNHHRSH*GAPCFGVPPEHMVG Trigger: GCCCACCATGTGCTCAGGAGGCACCCCGAAACATGGTGCACCCCAATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGGGAACTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | CTGGTGAGCCAGCCGCCTTCATCCGAGAAACCCATGGACAGCATCTaGGAGAGGGACTCAATCAGCCGGGGATCAGCCTCTGTAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSQPPSSEKPMDSI*ERDSISRGSASVDG Trigger: CCCATCTACAGAGGCTGATCCCCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGAGGTGGCCAAAGGGGTaGGGAAAGATGAGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGKAEEAQLSHGYLGLRWPKG*GKMSLL Trigger: CAGCAAGCTCATCTTTCCCAACCCCTTTGGCCACCT...CAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
||
| CDS TCA 90 bp | CCAGAGCAGCCCCGATGTCGTAATTCTTGGTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCGAGAAACCCATGGACAGCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEQPRCRNSWSVGAW*ASRLHPRNPWTASG Trigger: CCCAGATGCTGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGACCAAGAATTACGACATCGGGGCTGCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCCCTAGGAGCTGTAGGCCCCTGCCTGCCACCTTTCACTCACTATGGACCAGCCCCGTCAGGTTaGCTGACTTCCGAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHSLGAVGPCLPPFTHYGPAPSG*LTSEEQ Trigger: CTGCTCTTCGGAAGTCAGCAAACCTGACGGGGCTGG...TCCATAGTGAGTGAAAGGTGGCAGGCAGGGGCCTACAGCTCCTAGGGAATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGGAGCCGAAGAGCAGCTGCTaGGCTGAGTGTTACTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QAGILDCWCNAGGKSRWEPKSSC*AECYSC Trigger: ACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCGG...CTCCCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS TCA 90 bp | CCAGAGCAGCCCCGATGTCGTAATTCTTGGTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCGAGAAACCCATGGACAGCATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PEQPRCRNSWSVGAW*ASRLHPRNPWTAFQ Trigger: TTGGAATGCTGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGACCAAGAATTACGACATCGGGGCTGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | ACTACAAGACAAAGGGGGTGGGGCTTGGCCACAGCACTATCACAATaGTGGAGGGTGCTTCGAATACTGGATCGTGTCCAGAGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTRQRGWGLATALSQ*WRVLRILDRVQSSP Trigger: GGGGCTGCTCTGGACACGATCCAGTATTCGAAGCACCCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTGTCTTGTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAGGCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGCCGAAGAGCAGCTGCTaGGCTGAGTGTTACTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CQAGILDCWCNAGGKSRWPKSSC*AECYSC Trigger: ACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCGG...CCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
||
| CDS CCA 90 bp | AGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTaGGGCTTGGCCACAGCACTATCACAATGGTGGAGGGTGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPAALRDATTRQRG*GLATALSQWWRVLR Trigger: TCGAAGCACCCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
||
| CDS TCA 90 bp | GGCCAGCCAAAGTGTCCATGTTTCAGCTTCCGAAGCCAGCGGCTATaGGAGAAGCTATCAGAGAGGTGGCCAAAGGGGTTGGGAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GQPKCPCFSFRSQRL*EKLSERWPKGLGKM Trigger: CATCTTTCCCAACCCCTTTGGCCACCTCTCTGATAGCTTCTCTCATAGCCGCTGGCTTCGGAAGCTGAAACATGGACACTTTGGCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS CCA 90 bp | TGGCTGAGTGTTACTCTTGTCTTCTGTGCCTGTGCTGGAACTTTCTaGGGTAGTGGGTGTCAGGCGGCTTCTCTTCCCTCCATGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WLSVTLVFCACAGTF*GSGCQAASLPSMFH Trigger: GTGGAACATGGAGGGAAGAGAAGCCGCCTGACACCCACTACCCCAGAAAGTTCCAGCACAGGCACAGAAGACAAGAGTAACACTCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCACTGTTCTGTGTCCCTCAATGCCAGTCCTCCTTGTCACAGACTGGGGTTGGGAAAGATGAGCTaGCTGTGTTCCCTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHCSVSLNASPPCHRLGLGKMS*LCSLCR Trigger: CCTGCACAGGGAACACAGCAAGCTCATCTTTCCCAA...CCCCAGTCTGTGACAAGGAGGACTGGCATTGAGGGACACAGAACAGTGAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| CDS-3UTR CAA 90 bp | CCAGGCCTAGGGAAAGCAGAGGAAGCTCAGCTCAGCCACGGGTACCTGGGTCTGACATTCTTCAGGAAATaGACATTGGGATCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PGLGKAEEAQLSHGYLGLTFFRK*TLGSSG Trigger: ACCAGAAGATCCCAATGTCAATTTCCTGAAGAATGT...CAGACCCAGGTACCCGTGGCTGAGCTGAGCTTCCTCTGCTTTCCCTAGGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | CTATCTATAGAAGCCCTGCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTCCCACCACAGGCCCGTaGCAACCATCACAGATCACA | + |
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Preference number: 5 (lower is better) Translates to: LSIEALLLYVMQLQDKGGPTTGP*QPSQIT Trigger: TGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGGG...ACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGCAGGGCTTCTATAGATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | AAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCCCAGCCCCGTCAGGTTaGCTGACTTCCGAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KLSSCTFLLPEKASHIPTPAPSG*LTSEEQ Trigger: CTGCTCTTCGGAAGTCAGCAAACCTGACGGGGCTGG...GGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGCAGGAATTCTGGACTGCTGGTGCAATGCTGGCGGCAAGAGCAGGTGGATGGGTCCACTTCTTTaGAAGACAAATGTGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CQAGILDCWCNAGGKSRWMGPLL*KTNVSS Trigger: ACTGGACACATTTGTCTTCAAAAGAAGTGGACCCAT...CCACCTGCTCTTGCCGCCAGCATTGCACCAGCAGTCCAGAATTCCTGCCTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | AGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTTTAAGAGGTGGCCAAAGGGGTaGGGAAAGATGAGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RLLTNQVRGSYMGVLCFKRWPKG*GKMSLL Trigger: CAGCAAGCTCATCTTTCCCAACCCCTTTGGCCACCT...CTTAAAGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | GCACCTGGAAATAGTCCTCAAGTGGATGAGAAACCAAGTCCTCTGCAGGAGGCCTTCAGGAAATTGACATaGGGATCTTCTGGTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: APGNSPQVDEKPSPLQEAFRKLT*GSSGGA Trigger: TGCTCCACCAGAAGATCCCAATGTCAATTTCCTGAA...GGCCTCCTGCAGAGGACTTGGTTTCTCATCCACTTGAGGACTATTTCCAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015981.12 |
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| CDS-3UTR CAA 90 bp | ATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACCCAGCCCCGTCAGGTTaGCTGACTTCCGAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: MHIQNSPHALSYCLKRHHPAPSG*LTSEEQ Trigger: CTGCTCTTCGGAAGTCAGCAAACCTGACGGGGCTGG...GTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | AACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTCCGAAGAGCAGCTGCTaGGCTGAGTGTTACTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: NSPHALSYCLKRHHTFPPPKSSC*AECYSC Trigger: ACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCGG...AGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | CATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCCCACCACAGGCCCGTaGCAACCATCACAGATCACA | + |
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Preference number: 5 (lower is better) Translates to: HMHIQNSPHALSYCLKRHPTTGP*QPSQIT Trigger: TGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGGG...ATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | CAGCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGAGGTGGCCAAAGGGGTaGGGAAAGATGAGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QHMHIQNSPHALSYCLKRRWPKG*GKMSLL Trigger: CAGCAAGCTCATCTTTCCCAACCCCTTTGGCCACCT...CCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | TTTTATTACAGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGCCATCACAGATCACATaGGGGTGCACCATGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FYYRLLTNQVRGSYMGVLPSQIT*GCTMFR Trigger: CCGAAACATGGTGCACCCCAATGTGATCTGTGATGG...CAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCTGTAATAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | CTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGACCATCACAGATCACATaGGGGTGCACCATGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSYCLKRHHTFPPEDSTRPSQIT*GCTMFR Trigger: CCGAAACATGGTGCACCCCAATGTGATCTGTGATGG...TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | GCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCACCATCACAGATCACATaGGGGTGCACCATGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AYAHSKLSSCTFLLPEKAPSQIT*GCTMFR Trigger: CCGAAACATGGTGCACCCCAATGTGATCTGTGATGG...TGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | GGGGGACAGTATAAGATAAGATCCTTCATTCGGCTTCACATGAATTCTCCATTCTTGGGAAAGATGAGCTaGCTGTGTTCCCTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGQYKIRSFIRLHMNSPFLGKMS*LCSLCR Trigger: CCTGCACAGGGAACACAGCAAGCTCATCTTTCCCAA...GAATGGAGAATTCATGTGAAGCCGAATGAAGGATCTTATCTTATACTGTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | CAGCATATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCCGAAGAGCAGCTGCTaGGCTGAGTGTTACTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QHMHIQNSPHALSYCLKRPKSSC*AECYSC Trigger: ACAAGAGTAACACTCAGCCAAGCAGCTGCTCTTCGG...CCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | TATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCATTGGGAAAGATGAGCTaGCTGTGTTCCCTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YAHSKLSSCTFLLPEKASLGKMS*LCSLCR Trigger: CCTGCACAGGGAACACAGCAAGCTCATCTTTCCCAA...TGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | AGGTTACTTACAAACCAAGTCAGAGGAAGCTACATGGGGGTCCTGTGCTTTAAGATGGGTCCACTTCTTTaGAAGACAAATGTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLLTNQVRGSYMGVLCFKMGPLL*KTNVSS Trigger: ACTGGACACATTTGTCTTCAAAAGAAGTGGACCCAT...CTTAAAGCACAGGACCCCCATGTAGCTTCCTCTGACTTGGTTTGTAAGTAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | GGGGGACAGTATAAGATAAGATCCTTCATTCGGCTTCACATGAATTCTCCATTCTTCAGGAAATTGACATaGGGATCTTCTGGTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGQYKIRSFIRLHMNSPFFRKLT*GSSGGA Trigger: TGCTCCACCAGAAGATCCCAATGTCAATTTCCTGAA...GAATGGAGAATTCATGTGAAGCCGAATGAAGGATCTTATCTTATACTGTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 |
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| CDS-3UTR CAA 90 bp | ATGCACATTCAAAACTCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACTTCAGGAAATTGACATaGGGATCTTCTGGTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MHIQNSPHALSYCLKRHHFRKLT*GSSGGA Trigger: TGCTCCACCAGAAGATCCCAATGTCAATTTCCTGAA...GTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGAGTTTTGAATGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCATGCACTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAACATTCTTCAGGAAATaGACATTGGGATCTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPHALSYCLKRHHTFPPETFFRK*TLGSSG Trigger: ACCAGAAGATCCCAATGTCAATTTCCTGAAGAATGT...TTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAGTGCATGAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS-3UTR CAA 90 bp | CTTTCCTATTGCCTGAAAAGGCATCACACATTCCCACCTGAAGATTCTACAAGAACATTCTTCAGGAAATaGACATTGGGATCTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSYCLKRHHTFPPEDSTRTFFRK*TLGSSG Trigger: ACCAGAAGATCCCAATGTCAATTTCCTGAAGAATGT...TCTTGTAGAATCTTCAGGTGGGAATGTGTGATGCCTTTTCAGGCAATAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | AGCAGCCTCTCGCAGGGCCCCGGGCCGGCCGCGGCTTaGGCTTCCGCCTCCGGCTCCGGGCTGAAGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSQGPGPAAA*ASASGSGLKQK Trigger: CTTCTGCTTCAGCCCGGAGCCGGAGGCGGAAGCCCAAGCCGCGGCCGGCCCGGGGCCCTGCGAGAGGCTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | AGGGCAAGGGCGGCCATCCCCTGCACGAGGAGGACGTaGGCTCCAGTTCCCCGGTGGGCCCATCTCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RARAAIPCTRRT*APVPRWAHLPA Trigger: GGCTGGGAGATGGGCCCACCGGGGAACTGGAGCCCACGTCCTCCTCGTGCAGGGGATGGCCGCCCTTGCCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GGGGTGCACCATGTTTCGGGGTGCCTCCTGAGCACATaGTGGGCGATGTTCCCGCCGGCACTCCTTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVHHVSGCLLST*WAMFPPALLLL Trigger: GAGAAGAAGGAGTGCCGGCGGGAACATCGCCCACCATGTGCTCAGGAGGCACCCCGAAACATGGTGCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS TCA 72 bp | ACTGAGCAGGGCCCTCCCCAGCCCCGTCAGGTTTGCTaGCTTCCGAAGAGCAGCTGCTTGGCTGAGTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: TEQGPPQPRQVC*LPKSSCLAECY Trigger: GTAACACTCAGCCAAGCAGCTGCTCTTCGGAAGTCAGCAAACCTGACGGGGCTGGGGAGGGCCCTGCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GCCCTTCCCCTCGCACACGCTGCACAGGTCGTAGTCTaGGCACACACTGCACTTATAGCGAGTTCCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALPLAHAAQVVV*AHTALIASSHH Trigger: GTGGTGGGAACTCGCTATAAGTGCAGTGTGTGCCCAGACTACGACCTGTGCAGCGTGTGCGAGGGGAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GTGCACCATGTTTCGGGGTGCCTCCTGAGCACATGGTaGGCGATGTTCCCGCCGGCACTCCTTCTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VHHVSGCLLSTW*AMFPPALLLLF Trigger: AAAGAGAAGAAGGAGTGCCGGCGGGAACATCGCCCACCATGTGCTCAGGAGGCACCCCGAAACATGGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | CCACCACAGGCCCGTTGCAACCATCACAGATCACATTaGGGTGCACCATGTTTCGGGGTGCCTCCTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPQARCNHHRSH*GAPCFGVPPEH Trigger: GTGCTCAGGAGGCACCCCGAAACATGGTGCACCCCAATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | CAGCCGCCTTCATCCGAGAAACCCATGGACAGCATCTaGGAGAGGGACTCAATCAGCCGGGGATCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPSSEKPMDSI*ERDSISRGSAS Trigger: AGAGGCTGATCCCCGGCTGATTGAGTCCCTCTCCCAGATGCTGTCCATGGGTTTCTCGGATGAAGGCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 |
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| CDS CCA 72 bp | GGAGATGTGGGTATAGGGCAGCTTCCTTCAGCCCTGTaGGTCCTTCCTGTGAGGGGTCTAGAGAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GDVGIGQLPSAL*VLPVRGLESLA Trigger: GGCCAAGCTCTCTAGACCCCTCACAGGAAGGACCCACAGGGCTGAAGGAAGCTGCCCTATACCCACATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102774.11 |
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| CDS CAA 72 bp | GCCCTGTGGGTCCTTCCTGTGAGGGGTCTAGAGAGCTaGGCCCTTCCGATTCTGGCATCTGTAGAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALWVLPVRGLES*ALPILASVETG Trigger: TCCAGTCTCTACAGATGCCAGAATCGGAAGGGCCAAGCTCTCTAGACCCCTCACAGGAAGGACCCACAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102774.11 |
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| CDS TCA 72 bp | CCCCGATGTCGTAATTCTTGGTCTGTAGGAGCCTGGTaGGCCAGCCGCCTTCATCCGAGAAACCCATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PRCRNSWSVGAW*ASRLHPRNPWT Trigger: TGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGACCAAGAATTACGACATCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000136936.2 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | CAAAGGGGGTGGGGCTTGGCCACAGCACTATCACAATaGTGGAGGGTGCTTCGAATACTGGATCGTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRGWGLATALSQ*WRVLRILDRVQ Trigger: CTGGACACGATCCAGTATTCGAAGCACCCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GTTACTCTTGTCTTCTGTGCCTGTGCTGGAACTTTCTaGGGTAGTGGGTGTCAGGCGGCTTCTCTTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTLVFCACAGTF*GSGCQAASLPS Trigger: GGAGGGAAGAGAAGCCGCCTGACACCCACTACCCCAGAAAGTTCCAGCACAGGCACAGAAGACAAGAGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GCTGCTCTACGTGATGCAACTACAAGACAAAGGGGGTaGGGCTTGGCCACAGCACTATCACAATGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AALRDATTRQRG*GLATALSQWWR Trigger: CCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTGTCTTGTAGTTGCATCACGTAGAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
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| CDS GCA 72 bp | CACTGCACTTATAGCGAGTTCCCACCACAGGCCCGTTaGAACCATCACAGATCACATTGGGGTGCACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: HCTYSEFPPQAR*NHHRSHWGAPC Trigger: ACATGGTGCACCCCAATGTGATCTGTGATGGTTGCAACGGGCCTGTGGTGGGAACTCGCTATAAGTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CCA 72 bp | TACGTGATGCAACTACAAGACAAAGGGGGTGGGGCTTaGCCACAGCACTATCACAATGGTGGAGGGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YVMQLQDKGGGA*PQHYHNGGGCF Trigger: GAAGCACCCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTGTCTTGTAGTTGCATCACGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
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| CDS CAA 72 bp | CTACGTGATGCAACTACAAGACAAAGGGGGTGGGGCTaGGCCACAGCACTATCACAATGGTGGAGGGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRDATTRQRGWG*ATALSQWWRVL Trigger: AAGCACCCTCCACCATTGTGATAGTGCTGTGGCCAAGCCCCACCCCCTTTGTCTTGTAGTTGCATCACGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
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| CDS TCA 72 bp | AAGTGTCCATGTTTCAGCTTCCGAAGCCAGCGGCTATaGGAGAAGCTATCAGAGAGGTGGCCAAAGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KCPCFSFRSQRL*EKLSERWPKGL Trigger: CAACCCCTTTGGCCACCTCTCTGATAGCTTCTCTCATAGCCGCTGGCTTCGGAAGCTGAAACATGGACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015981.12 ENSMUST00000102774.11 ENSMUST00000143379.2 |
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| CDS CAA 72 bp | AACCCATGGACAGCATTCCAAGGCTATCTTTTTCATTaGCTCTGTCAGAGACTGAGCAGGGCCCTCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NPWTAFQGYLFH*LCQRLSRALPS Trigger: GCTGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCAAATGAAAAAGATAGCCTTGGAATGCTGTCCATGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143379.2 |
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| CDS CCA 72 bp | GAGCTTGGCCCTTCCGATTCTGGCATCTGTAGAGACTaGAGTTCACCTGTAGATGGGTCCACTTCTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ELGPSDSGICRD*SSPVDGSTSFE Trigger: TTCAAAAGAAGTGGACCCATCTACAGGTGAACTCCAGTCTCTACAGATGCCAGAATCGGAAGGGCCAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102774.11 |
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