Pregenerated sensors for SQOR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005803Ensembl transcript IDs: ENSMUST00000005953.11, ENSMUST00000110506.9, ENSMUST00000124460.2, ENSMUST00000126403.9, ENSMUST00000147475.2, ENSMUST00000176343.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATGCCCAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTATTCGCTCTTTACTCTaGTCAAAAGGGAAGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HAQMKQLSQEGWTSPVASIRSLL*SKGKVS Trigger: GGAAACCTTCCCTTTTGATCAGAGTAAAGAGCGAAT...AGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTGGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| 3UTR-3UTR TCA 90 bp | TCGTTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGAACCTCCTTAAAGGGTaGGGTTCTGAGTCCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SFWVVHMIAIQRPRKVTMNLLKG*GSESFV Trigger: TACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTT...CATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACAAACCTCCTTAAAGGGTaGGGTTCTGAGTCCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTNLLKG*GSESFV Trigger: TACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTT...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| 3UTR TCA 72 bp | GCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTaGGCATCATATTCCAGTACAGGAATGGCATCATGT | + |
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Preference number: 3 (lower is better) Translates to: AFARRLDLPSSL*ASYSSTGMASC Trigger: ACATGATGCCATTCCTGTACTGGAATATGATGCTCAGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| 3UTR CCA 72 bp | ATTCATGCCCAGATGAAACAGCTTTCGCAAGAAGGCTaGACCTCCCCAGTAGCCTCTGAGCATCATATTCCA | + |
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Preference number: 3 (lower is better) Translates to: IHAQMKQLSQEG*TSPVASEHHIP Trigger: TGGAATATGATGCTCAGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTGGGCATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| 3UTR TCA 72 bp | CCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTaGGGTTCTGAGTCCTTTGTATCTGTCATGTCAATC | + |
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Preference number: 3 (lower is better) Translates to: PRKVTMSNLLKG*GSESFVSVMSI Trigger: GATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATCAGTAACTGCGATTTaGATCCAGAAGCCATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTSVTAI*IQKPSK Trigger: CTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGA...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| 3UTR CCA 72 bp | TTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTaGGTTGTCCACATGATAGCTATTCAGAGGCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LLFHLDVSKDSF*VVHMIAIQRPR Trigger: TCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR TCA 90 bp | CAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTGAGCATGGGCATTGCCTTCCTTaGAACCCTGCAGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QMKQLSQEGWTSPVASEHGHCLP*NPAGPS Trigger: GGAAGGCCCTGCAGGGTTTCAAGGAAGGCAATGCCC...ATGCTCAGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR TCA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCTTCGAGTGGCCATGGTaGTCCCTCCAGCTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLFEWPW*SLQLPH Trigger: GTGGGGGAGCTGGAGGGATCACCATGGCCACTCGAA...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR TCA 90 bp | TTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAGGGGTCCGGCCTGCTaGGTGCCCAGCCTAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: FWVVHMIAIQRPRKVTMSRGPAC*VPSLRK Trigger: TTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCT...GGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR TCA 90 bp | GAATCACTCGGTTGTAGCCAGTTACCAGTGGGCACGAGGTATAACCATCATACTAGGGGTCCGGCCTGCTaGGTGCCCAGCCTAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ESLGCSQLPVGTRYNHHTRGPAC*VPSLRK Trigger: TTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCT...AGTATGATGGTTATACCTCGTGCCCACTGGTAACTGGCTACAACCGAGTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR TCA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTGGGCATTGCCTTCCTTaGAACCCTGCAGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFRGLERSPCPTSLKGEVGHCLP*NPAGPS Trigger: GGAAGGCCCTGCAGGGTTTCAAGGAAGGCAATGCCC...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | CAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTGAGCATCATATTCCAAGGTACATGATCTTCTaGGGGGCACCAGCACACTTC | + |
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Preference number: 4 (lower is better) Translates to: QLSQEGWTSPVASEHHIPRYMIF*GAPAHF Trigger: GAAGTGTGCTGGTGCCCCCCAGAAGATCATGTACCT...TGGAATATGATGCTCAGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR TCA 90 bp | AAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTGCGATTTTCGAGTGGCCATGGTaGTCCCTCCAGCTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KGEVLSPLYLSCQSVTAIFEWPW*SLQLPH Trigger: GTGGGGGAGCTGGAGGGATCACCATGGCCACTCGAA...AATCGCAGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR TCA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTCCACAGGACTCCTCTTaGGGACATCTGGTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LFRGLERSPCPTSLKGEVPQDSS*GHLVHS Trigger: TGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGG...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR TCA 90 bp | TTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCCCACAGGACTCCTCTTaGGGACATCTGGTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: FWVVHMIAIQRPRKVTMSPQDSS*GHLVHS Trigger: TGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGG...GGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | CTGTGTAGTCAAACTCAGCAAGAATCACTCGGTTGTAGCCAGTTACCAGTGGGCCCTTGCCACTGTCTGTaGGGATACAGTTCTCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCSQTQQESLGCSQLPVGPCHCL*GYSSRL Trigger: CAGACGAGAACTGTATCCGCACAGACAGTGGCAAGG...GCCCACTGGTAACTGGCTACAACCGAGTGATTCTTGCTGAGTTTGACTACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR TCA 90 bp | ATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGCCACAGGACTCCTCTTaGGGACATCTGGTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: MIAIQRPRKVTMSNLLKGPQDSS*GHLVHS Trigger: TGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGG...CCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | TCGTTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGCCTTGCCACTGTCTGTaGGGATACAGTTCTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFWVVHMIAIQRPRKVTMPCHCL*GYSSRL Trigger: CAGACGAGAACTGTATCCGCACAGACAGTGGCAAGG...CATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR GCA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCCTTCCTTGAAACCCTaGAGGGCCTTCCATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLPSLKP*RAFHVF Trigger: GAAGACATGGAAGGCCCTGCAGGGTTTCAAGGAAGG...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR TCA 90 bp | CAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTGAGCATCTCCACTGTCTTCACTaGGTAATTGGACCCTATTTT | + |
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Preference number: 4 (lower is better) Translates to: QMKQLSQEGWTSPVASEHLHCLH*VIGPYF Trigger: AAAATAGGGTCCAATTACTCAGTGAAGACAGTGGAG...ATGCTCAGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR GCA 90 bp | AGCAAGAATCACTCGGTTGTAGCCAGTTACCAGTGGGCACGAGGTATAACCATCTCCCGAATGATCTCCTaGAAGGCATCTGCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: SKNHSVVASYQWARGITISRMIS*KASAYF Trigger: GAAGTATGCAGATGCCTTGCAGGAGATCATTCGGGA...GATGGTTATACCTCGTGCCCACTGGTAACTGGCTACAACCGAGTGATTCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CCA 90 bp | TCATGCCCAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCAATTGGACCCTATTTTaGGATAAGCAAAGCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SCPDETAFARRLDLPSSLNWTLF*DKQSLQ Trigger: CTGAAGGCTTTGCTTATCCCAAAATAGGGTCCAATT...GAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTGGGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CCA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTCCTCTTGAGGACATCTaGTGCACTCATAGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LFRGLERSPCPTSLKGEVPLEDI*CTHRWC Trigger: ACACCACCTATGAGTGCACCAGATGTCCTCAAGAGG...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR TCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGAGGGGTCCGGCCTGCTaGGTGCCCAGCCTAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMRGPAC*VPSLRK Trigger: TTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCT...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR GCA 90 bp | TTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCTCCCGAATGATCTCCTaGAAGGCATCTGCATACTTC | + |
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Preference number: 4 (lower is better) Translates to: FWVVHMIAIQRPRKVTMSSRMIS*KASAYF Trigger: GAAGTATGCAGATGCCTTGCAGGAGATCATTCGGGA...GGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTTGGTGCAGTCCCCAATaGCAAACACATTCGGGTATT | + |
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Preference number: 4 (lower is better) Translates to: LFRGLERSPCPTSLKGEVWCSPQ*QTHSGI Trigger: AATACCCGAATGTGTTTGGCATTGGGGACTGCACCA...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | TTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCTGGTGCAGTCCCCAATaGCAAACACATTCGGGTATT | + |
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Preference number: 4 (lower is better) Translates to: FWVVHMIAIQRPRKVTMSWCSPQ*QTHSGI Trigger: AATACCCGAATGTGTTTGGCATTGGGGACTGCACCA...GGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCAGAAGTGCCTCTCACTaGGTTCAACAATGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLRSASH*VQQWPH Trigger: ATGTGGCCATTGTTGAACCCAGTGAGAGGCACTTCT...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | CATGCCCAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTAGCCTCTTCTTCACTGAGTAATTaGACCCTATTTTGGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: HAQMKQLSQEGWTSPVASSSLSN*TLFWDK Trigger: CTTATCCCAAAATAGGGTCCAATTACTCAGTGAAGA...AGAGGCTACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTGGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CCA 90 bp | ATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGCCTCTTGAGGACATCTaGTGCACTCATAGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: MIAIQRPRKVTMSNLLKGPLEDI*CTHRWC Trigger: ACACCACCTATGAGTGCACCAGATGTCCTCAAGAGG...CCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR TCA 90 bp | ATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGCAGCAGCAGTCTTTaGAGTTGGAAGATTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: MIAIQRPRKVTMSNLLKGCSSSL*SWKIGA Trigger: TGCACCAATCTTCCAACTTCAAAGACTGCTGCTGCA...CCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | ATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGGTGCAGTCCCCAATaGCAAACACATTCGGGTATT | + |
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Preference number: 4 (lower is better) Translates to: MIAIQRPRKVTMSNLLKGWCSPQ*QTHSGI Trigger: AATACCCGAATGTGTTTGGCATTGGGGACTGCACCA...CCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CCA 90 bp | CTTTACTCTGATCAAAAGGGAAGGTTTCCAGGGGCTGAGCTGTGTAGTCAAACTCACTGGGTTCAACAATaGCCACATTCTCTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LYSDQKGRFPGAELCSQTHWVQQ*PHSLLQ Trigger: TTGGAGCAGAGAATGTGGCCATTGTTGAACCCAGTG...AGTTTGACTACACAGCTCAGCCCCTGGAAACCTTCCCTTTTGATCAGAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CCA 90 bp | CTTTACTCTGATCAAAAGGGAAGGTTTCCAGGGGCTGAGCTGTGTAGTCAAACTCTTCACCGGAGTGTTTaGGAAGGTGAAAAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: LYSDQKGRFPGAELCSQTLHRSV*EGEKGI Trigger: AATGCCCTTTTCACCTTCCCAAACACTCCGGTGAAG...AGTTTGACTACACAGCTCAGCCCCTGGAAACCTTCCCTTTTGATCAGAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CCA 90 bp | TTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCTGGTGCACTCATAGGTaGTGTGACATGAAGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: FWVVHMIAIQRPRKVTMSWCTHR*CDMKHF Trigger: GAAATGCTTCATGTCACACCACCTATGAGTGCACCA...GGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR TCA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTCCACTGTCTTCACTaGGTAATTGGACCCTATTTT | + |
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Preference number: 4 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLLHCLH*VIGPYF Trigger: AAAATAGGGTCCAATTACTCAGTGAAGACAGTGGAG...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR TCA 90 bp | AATAGAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCGGGCATTGCCTTCCTTaGAACCCTGCAGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NRVLLFHLDVSKDSFWVVGHCLP*NPAGPS Trigger: GGAAGGCCCTGCAGGGTTTCAAGGAAGGCAATGCCC...GACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGTCATGTCAATCAGTAACTGCGATTTTGATCCAGAAGCCATCCAAGAACCTTCCTTGAAACCCTaGAGGGCCTTCCATGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VSVMSISNCDFDPEAIQEPSLKP*RAFHVF Trigger: GAAGACATGGAAGGCCCTGCAGGGTTTCAAGGAAGG...TTCTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGATTGACATGACAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR GCA 90 bp | ACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTACTTGAGGACATCTGGTaGACTCATAGGTGGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TSLKGEVLSPLYLSCQSVLEDIW*THRWCD Trigger: GTCACACCACCTATGAGTGCACCAGATGTCCTCAAG...TACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | TGTCCAACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAACACTGGGTTCAACAATaGCCACATTCTCTGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CPTSLKGEVLSPLYLSCQHWVQQ*PHSLLQ Trigger: TTGGAGCAGAGAATGTGGCCATTGTTGAACCCAGTG...TTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | TCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTAGGTACATGATCTTCTaGGGGGCACCAGCACACTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKGEVLSPLYLSCQSVTRYMIF*GAPAHF Trigger: GAAGTGTGCTGGTGCCCCCCAGAAGATCATGTACCT...AGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTATTCCAGTACAGGAATaGCATCATGTCAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFRGLERSPCPTSLKGEVIPVQE*HHVSLH Trigger: ATGAAGGCTGACATGATGCCATTCCTGTACTGGAAT...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR TCA 90 bp | GTATCTGTCATGTCAATCAGTAACTGCGATTTTGATCCAGAAGCCATCCAAGAACTCCCCAGTAGCCTCTaGGCATCATATTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSVMSISNCDFDPEAIQELPSSL*ASYSST Trigger: TGTACTGGAATATGATGCTCAGAGGCTACTGGGGAG...TTCTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGATTGACATGACAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR TCA 90 bp | TCGTTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGAAGAAAAGCAAGCTGTaGGCCATCTTTAATTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFWVVHMIAIQRPRKVTMKKSKL*AIFNSC Trigger: GCATGAATTAAAGATGGCTCACAGCTTGCTTTTCTT...CATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176343.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGCCTTGCCACTGTCTGTaGGGATACAGTTCTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMPCHCL*GYSSRL Trigger: CAGACGAGAACTGTATCCGCACAGACAGTGGCAAGG...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTATCCCGAATGATCTCCTaGAAGGCATCTGCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSLKGEVLSPLYLSCQSVSRMIS*KASAYF Trigger: GAAGTATGCAGATGCCTTGCAGGAGATCATTCGGGA...TACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR GCA 90 bp | GTATCTGTCATGTCAATCAGTAACTGCGATTTTGATCCAGAAGCCATCCAAGAACTTGAGGACATCTGGTaGACTCATAGGTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVMSISNCDFDPEAIQELEDIW*THRWCD Trigger: GTCACACCACCTATGAGTGCACCAGATGTCCTCAAG...TTCTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGATTGACATGACAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTGCGATTCACTGGGTTCAACAATaGCCACATTCTCTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGEVLSPLYLSCQSVTAIHWVQQ*PHSLLQ Trigger: TTGGAGCAGAGAATGTGGCCATTGTTGAACCCAGTG...AATCGCAGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAAGAAGTGCCTCTCACTaGGTTCAACAATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TSLKGEVLSPLYLSCQSVRSASH*VQQWPH Trigger: ATGTGGCCATTGTTGAACCCAGTGAGAGGCACTTCT...TACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTGCGATTCTTCACCGGAGTGTTTaGGAAGGTGAAAAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KGEVLSPLYLSCQSVTAILHRSV*EGEKGI Trigger: AATGCCCTTTTCACCTTCCCAAACACTCCGGTGAAG...AATCGCAGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACAAGGTACATGATCTTCTaGGGGGCACCAGCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTRYMIF*GAPAHF Trigger: GAAGTGTGCTGGTGCCCCCCAGAAGATCATGTACCT...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGCTTGAGGACATCTGGTaGACTCATAGGTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMLEDIW*THRWCD Trigger: GTCACACCACCTATGAGTGCACCAGATGTCCTCAAG...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTGCGATTCTCCACTGTCTTCACTaGGTAATTGGACCCTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGEVLSPLYLSCQSVTAILHCLH*VIGPYF Trigger: AAAATAGGGTCCAATTACTCAGTGAAGACAGTGGAG...AATCGCAGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGTGCAGCAGCAGTCTTTaGAGTTGGAAGATTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMCSSSL*SWKIGA Trigger: TGCACCAATCTTCCAACTTCAAAGACTGCTGCTGCA...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR GCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGTCCCGAATGATCTCCTaGAAGGCATCTGCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMSRMIS*KASAYF Trigger: GAAGTATGCAGATGCCTTGCAGGAGATCATTCGGGA...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCAACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAAAATTGGACCCTATTTTaGGATAAGCAAAGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPTSLKGEVLSPLYLSCQNWTLF*DKQSLQ Trigger: CTGAAGGCTTTGCTTATCCCAAAATAGGGTCCAATT...TTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGCTTCACCGGAGTGTTTaGGAAGGTGAAAAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMLHRSV*EGEKGI Trigger: AATGCCCTTTTCACCTTCCCAAACACTCCGGTGAAG...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAATTCCAGTACAGGAATaGCATCATGTCAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSLKGEVLSPLYLSCQSVIPVQE*HHVSLH Trigger: ATGAAGGCTGACATGATGCCATTCCTGTACTGGAAT...TACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAACTATTCGCTCTTTACTCTaGTCAAAAGGGAAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLKGEVLSPLYLSCQSVTIRSLL*SKGKVS Trigger: GGAAACCTTCCCTTTTGATCAGAGTAAAGAGCGAAT...AGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR TCA 90 bp | AATAGAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCTCCCCAGTAGCCTCTaGGCATCATATTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NRVLLFHLDVSKDSFWVVLPSSL*ASYSST Trigger: TGTACTGGAATATGATGCTCAGAGGCTACTGGGGAG...GACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACAAATTGGACCCTATTTTaGGATAAGCAAAGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTNWTLF*DKQSLQ Trigger: CTGAAGGCTTTGCTTATCCCAAAATAGGGTCCAATT...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CCA 90 bp | AATAGAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCTGGTGCACTCATAGGTaGTGTGACATGAAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRVLLFHLDVSKDSFWVVWCTHR*CDMKHF Trigger: GAAATGCTTCATGTCACACCACCTATGAGTGCACCA...GACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CCA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGTCTTCACTGAGTAATTaGACCCTATTTTGGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMSSLSN*TLFWDK Trigger: CTTATCCCAAAATAGGGTCCAATTACTCAGTGAAGA...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CCA 90 bp | AATAGAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCTCTTCACTGAGTAATTaGACCCTATTTTGGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRVLLFHLDVSKDSFWVVSSLSN*TLFWDK Trigger: CTTATCCCAAAATAGGGTCCAATTACTCAGTGAAGA...GACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS TCA 90 bp | GCTGTGCAGCAGGCTCCTGTATGCAATTGGAGGGGTCCGGCCTGCTaGGTGCCCAGCCTAAGAAAACAGGCAAAGAGCCGGGCACGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVQQAPVCNWRGPAC*VPSLRKQAKSRARG Trigger: TCCACGTGCCCGGCTCTTTGCCTGTTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCTCCAATTGCATACAGGAGCCTGCTGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000124460.2 ENSMUST00000126403.9 ENSMUST00000147475.2 |
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| CDS GCA 90 bp | CAGCTCCCCCACCAAGTACCAGCACCTCATAGTGGTTCTTGGCTGTaGAGCAGGCTCCTGTATGCAATTGGAGGGGTCCGGCCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLPHQVPAPHSGSWL*SRLLYAIGGVRPAE Trigger: CTCAGCAGGCCGGACCCCTCCAATTGCATACAGGAGCCTGCTGCACAGCCAAGAACCACTATGAGGTGCTGGTACTTGGTGGGGGAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CCA 90 bp | TCCCTCCAGCTCCCCCACCAAGTACCAGCACCTCATAGTGGTTCTTaGCTGTGCAGCAGGCTCCTGTATGCAATTGGAGGGGTCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQLPHQVPAPHSGS*LCSRLLYAIGGVRP Trigger: AGGCCGGACCCCTCCAATTGCATACAGGAGCCTGCTGCACAGCCAAGAACCACTATGAGGTGCTGGTACTTGGTGGGGGAGCTGGAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CCA 90 bp | ATGGAATCACACTCAGTGTGGAACGGACTGACAAGGACAACTCTTTaGCACCCGCGCCCACTAGTGTCCAGATTGGCTGGTAGAAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MESHSVWNGLTRTTL*HPRPLVSRLAGRSA Trigger: GGCACTTCTACCAGCCAATCTGGACACTAGTGGGCGCGGGTGCCAAAGAGTTGTCCTTGTCAGTCCGTTCCACACTGAGTGTGATTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS-3UTR CAA 90 bp | GTCAAACTCAGCAAGAATCACTCGGTTGTAGCCAGTTACCAGTGGGCACGAGGTAGGGCATTGCCTTCCTaGAAACCCTGCAGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKLSKNHSVVASYQWARGRALPS*KPCRAF Trigger: GAAGGCCCTGCAGGGTTTCAAGGAAGGCAATGCCCT...ACCTCGTGCCCACTGGTAACTGGCTACAACCGAGTGATTCTTGCTGAGTTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS CCA 90 bp | CTCTATCTTGAATCCACTGCACTCCGGATGGAATCACACTCAGTGTaGAACGGACTGACAAGGACAACTCTTTGGCACCCGCGCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LYLESTALRMESHSV*NGLTRTTLWHPRPL Trigger: TAGTGGGCGCGGGTGCCAAAGAGTTGTCCTTGTCAGTCCGTTCCACACTGAGTGTGATTCCATCCGGAGTGCAGTGGATTCAAGATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS TCA 90 bp | GTGCGGATACAGTTCTCGTCTGGGTTAAGTTCCGCCACTCTATCTTaGATCCACTGCACTCCGGATGGAATCACACTCAGTGTGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: VRIQFSSGLSSATLS*IHCTPDGITLSVER Trigger: CCGTTCCACACTGAGTGTGATTCCATCCGGAGTGCAGTGGATTCAAGATAGAGTGGCGGAACTTAACCCAGACGAGAACTGTATCCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS GCA 90 bp | TTGGTGCAGTCCCCAATGCCAAACACATTCGGGTATTTCTTATGCTaGAGAGTCTCTTTGTCCACGTCCACCCAGCCAGCAGAATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVQSPMPNTFGYFLC*RVSLSTSTQPAESA Trigger: GGCTGATTCTGCTGGCTGGGTGGACGTGGACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGACTGCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | TCGTTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGAGGGCATTGCCTTCCTaGAAACCCTGCAGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFWVVHMIAIQRPRKVTMRALPS*KPCRAF Trigger: GAAGGCCCTGCAGGGTTTCAAGGAAGGCAATGCCCT...CATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS GCA 90 bp | CCAGCCAGCAGAATCAGCCACAGGACTCCTCTTGAGGACATCTGGTaGACTCATAGGTGGTGTGACATGAAGCATTTCATAAGGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PASRISHRTPLEDIW*THRWCDMKHFIRNH Trigger: GTGATTCCTTATGAAATGCTTCATGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGATTCTGCTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS GCA 90 bp | AGATTGGTGCAGTCCCCAATGCCAAACACATTCGGGTATTTCTTATaGTGCAGAGTCTCTTTGTCCACGTCCACCCAGCCAGCAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: RLVQSPMPNTFGYFL*CRVSLSTSTQPAES Trigger: TGATTCTGCTGGCTGGGTGGACGTGGACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGACTGCACCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CCA 90 bp | ATCAGCCACAGGACTCCTCTTGAGGACATCTGGTGCACTCATAGGTaGTGTGACATGAAGCATTTCATAAGGAATCACATGCGTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISHRTPLEDIWCTHR*CDMKHFIRNHMRLP Trigger: GGGGAGACGCATGTGATTCCTTATGAAATGCTTCATGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CCA 90 bp | CACCCAGCCAGCAGAATCAGCCACAGGACTCCTCTTGAGGACATCTaGTGCACTCATAGGTGGTGTGACATGAAGCATTTCATAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HPASRISHRTPLEDI*CTHRWCDMKHFIRN Trigger: ATTCCTTATGAAATGCTTCATGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGATTCTGCTGGCTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCCACTAGTGTCCAGATaGGCTGGTAGAAGTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLPLVSR*AGRSAS Trigger: AGAGGCACTTCTACCAGCCAATCTGGACACTAGTGG...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CAA 90 bp | TTAATTCATGCCCAGATGAAACAGCTTTCGCAAGAAGGCTGGACCTCCCCAGTACCACTAGTGTCCAGATaGGCTGGTAGAAGTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIHAQMKQLSQEGWTSPVPLVSR*AGRSAS Trigger: AGAGGCACTTCTACCAGCCAATCTGGACACTAGTGG...TACTGGGGAGGTCCAGCCTTCTTGCGAAAGCTGTTTCATCTGGGCATGAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
||
| CDS-3UTR CAA 90 bp | TCGTTCTGGGTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGAAAACGGCCTCCTGCTaGTCAGGTCGGACCTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SFWVVHMIAIQRPRKVTMKTASC*SGRTSI Trigger: TATTGAGGTCCGACCTGACAAGCAGGAGGCCGTTTT...CATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAACCCAGAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTAGTCAAACTCAGCAAGAATCACTCGGTTGTAGCCAGTTACCAGTGGAAAACGGCCTCCTGCTaGTCAGGTCGGACCTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SCVVKLSKNHSVVASYQWKTASC*SGRTSI Trigger: TATTGAGGTCCGACCTGACAAGCAGGAGGCCGTTTT...CCACTGGTAACTGGCTACAACCGAGTGATTCTTGCTGAGTTTGACTACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAATCAGTAGCCACAGGACTCCTCTaGAGGACATCTGGTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLKGEVLSPLYLSCQSVATGLL*RTSGAL Trigger: GAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGC...TACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CAA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCAGCAGTCTTTGAAGTaGGAAGATTGGTGCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLQQSLK*EDWCSP Trigger: GGGACTGCACCAATCTTCCAACTTCAAAGACTGCTG...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
||
| CDS-3UTR CAA 90 bp | CTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCCTTAAAGGGTGAGGTTAAGATGATGTTTGCCTaGGGTCGCTTTCCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRGLERSPCPTSLKGEVKMMFA*GRFPVF Trigger: GAAGACTGGAAAGCGACCCAAGGCAAACATCATCTT...AACCTCACCCTTTAAGGAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
||
| CDS-3UTR CAA 90 bp | GTATCTGTCATGTCAATCAGTAACTGCGATTTTGATCCAGAAGCCATCCAAGAAGCCACAGGACTCCTCTaGAGGACATCTGGTGCACTC | + |
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Preference number: 5 (lower is better) Translates to: VSVMSISNCDFDPEAIQEATGLL*RTSGAL Trigger: GAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGC...TTCTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGATTGACATGACAGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS GCA 90 bp | CTGCAGCAGCAGTCTTTGAAGTTGGAAGATTGGTGCAGTCCCCAATaGCAAACACATTCGGGTATTTCTTATGCTGCAGAGTCTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LQQQSLKLEDWCSPQ*QTHSGISYAAESLC Trigger: ACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGACTGCACCAATCTTCCAACTTCAAAGACTGCTGCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | AGTAATTCGCTCTTTACTCTGATCAAAAGGGAAGGTTTCCAGGGGCTGAGCTGTAAGATGATGTTTGCCTaGGGTCGCTTTCCAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SNSLFTLIKREGFQGLSCKMMFA*GRFPVF Trigger: GAAGACTGGAAAGCGACCCAAGGCAAACATCATCTT...ACAGCTCAGCCCCTGGAAACCTTCCCTTTTGATCAGAGTAAAGAGCGAATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126403.9 |
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| CDS-3UTR CAA 90 bp | TGTCCAACCTCCTTAAAGGGTGAGGTTCTGAGTCCTTTGTATCTGTCATGTCAACAGCAGTCTTTGAAGTaGGAAGATTGGTGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: CPTSLKGEVLSPLYLSCQQQSLK*EDWCSP Trigger: GGGACTGCACCAATCTTCCAACTTCAAAGACTGCTG...TTGACATGACAGATACAAAGGACTCAGAACCTCACCCTTTAAGGAGGTTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CAA 90 bp | GTTGTCCACATGATAGCTATTCAGAGGCCTAGAAAGGTCACCATGTCCAACCTCTCAGTAACTGCGATTTaGATCCAGAAGCCATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VVHMIAIQRPRKVTMSNLSVTAI*IQKPSK Trigger: CTTGGATGGCTTCTGGATCAAAATCGCAGTTACTGA...GAGGTTGGACATGGTGACCTTTCTAGGCCTCTGAATAGCTATCATGTGGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACACCACTAGTGTCCAGATaGGCTGGTAGAAGTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTPLVSR*AGRSAS Trigger: AGAGGCACTTCTACCAGCCAATCTGGACACTAGTGG...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS-3UTR CAA 90 bp | GTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACATGAAAACGGCCTCCTGCTaGTCAGGTCGGACCTCAATA | + |
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Preference number: 5 (lower is better) Translates to: VLLFHLDVSKDSFWVVHMKTASC*SGRTSI Trigger: TATTGAGGTCCGACCTGACAAGCAGGAGGCCGTTTT...CATGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | AATAGAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCGCCACAGGACTCCTCTaGAGGACATCTGGTGCACTC | + |
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Preference number: 5 (lower is better) Translates to: NRVLLFHLDVSKDSFWVVATGLL*RTSGAL Trigger: GAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGC...GACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTTATTATTTCACTTGGATGTTTCCAAAGACTCGTTCTGGGTTGTCCACAAAGATGATGTTTGCCTaGGGTCGCTTTCCAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: EFYYFTWMFPKTRSGLSTKMMFA*GRFPVF Trigger: GAAGACTGGAAAGCGACCCAAGGCAAACATCATCTT...TGTGGACAACCCAGAACGAGTCTTTGGAAACATCCAAGTGAAATAATAAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 |
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| CDS TCA 72 bp | CAGGCTCCTGTATGCAATTGGAGGGGTCCGGCCTGCTaGGTGCCCAGCCTAAGAAAACAGGCAAAGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: QAPVCNWRGPAC*VPSLRKQAKSR Trigger: CCGGCTCTTTGCCTGTTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCTCCAATTGCATACAGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000124460.2 ENSMUST00000126403.9 ENSMUST00000147475.2 |
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| CDS CAA 90 bp | CACCTCATAGTGGTTCTTGGCTGTGCAGCAGGCTCCTGTATGCAATaGGAGGGGTCCGGCCTGCTGAGTGCCCAGCCTAAGAAAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: HLIVVLGCAAGSCMQ*EGSGLLSAQPKKTG Trigger: GCCTGTTTTCTTAGGCTGGGCACTCAGCAGGCCGGACCCCTCCAATTGCATACAGGAGCCTGCTGCACAGCCAAGAACCACTATGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS TCA 72 bp | CTGCTCCAACTCTCCTCTTCATTCGAGTGGCCATGGTaGTCCCTCCAGCTCCCCCACCAAGTACCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LLQLSSSFEWPW*SLQLPHQVPAP Trigger: AGGTGCTGGTACTTGGTGGGGGAGCTGGAGGGATCACCATGGCCACTCGAATGAAGAGGAGAGTTGGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CCA 72 bp | CTCCCCCACCAAGTACCAGCACCTCATAGTGGTTCTTaGCTGTGCAGCAGGCTCCTGTATGCAATTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPHQVPAPHSGS*LCSRLLYAIGG Trigger: CCCTCCAATTGCATACAGGAGCCTGCTGCACAGCCAAGAACCACTATGAGGTGCTGGTACTTGGTGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CCA 72 bp | CACTCAGTGTGGAACGGACTGACAAGGACAACTCTTTaGCACCCGCGCCCACTAGTGTCCAGATTGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HSVWNGLTRTTL*HPRPLVSRLAG Trigger: ACCAGCCAATCTGGACACTAGTGGGCGCGGGTGCCAAAGAGTTGTCCTTGTCAGTCCGTTCCACACTGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CAA 72 bp | ACACTCAGTGTGGAACGGACTGACAAGGACAACTCTTaGGCACCCGCGCCCACTAGTGTCCAGATTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TLSVERTDKDNS*APAPTSVQIGW Trigger: CCAGCCAATCTGGACACTAGTGGGCGCGGGTGCCAAAGAGTTGTCCTTGTCAGTCCGTTCCACACTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CAA 72 bp | TCCACCCAGCCAGCAGAATCAGCCACAGGACTCCTCTaGAGGACATCTGGTGCACTCATAGGTGGTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: STQPAESATGLL*RTSGALIGGVT Trigger: TGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGATTCTGCTGGCTGGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CCA 72 bp | GAATCCACTGCACTCCGGATGGAATCACACTCAGTGTaGAACGGACTGACAAGGACAACTCTTTGGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: ESTALRMESHSV*NGLTRTTLWHP Trigger: CGGGTGCCAAAGAGTTGTCCTTGTCAGTCCGTTCCACACTGAGTGTGATTCCATCCGGAGTGCAGTGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CAA 72 bp | ACAACTCTTTGGCACCCGCGCCCACTAGTGTCCAGATaGGCTGGTAGAAGTGCCTCTCACTGGGTTCAACAA | + |
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Preference number: 6 (lower is better) Translates to: TTLWHPRPLVSR*AGRSASHWVQQ Trigger: TTGTTGAACCCAGTGAGAGGCACTTCTACCAGCCAATCTGGACACTAGTGGGCGCGGGTGCCAAAGAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CAA 90 bp | CCAATGCCAAACACATTCGGGTATTTCTTATGCTGCAGAGTCTCTTaGTCCACGTCCACCCAGCCAGCAGAATCAGCCACAGGACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PMPNTFGYFLCCRVS*STSTQPAESATGLL Trigger: GAGGAGTCCTGTGGCTGATTCTGCTGGCTGGGTGGACGTGGACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CAA 90 bp | TGTGCGGATACAGTTCTCGTCTGGGTTAAGTTCCGCCACTCTATCTaGAATCCACTGCACTCCGGATGGAATCACACTCAGTGTGGAACG | + |
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Preference number: 6 (lower is better) Translates to: CADTVLVWVKFRHSI*NPLHSGWNHTQCGT Trigger: CGTTCCACACTGAGTGTGATTCCATCCGGAGTGCAGTGGATTCAAGATAGAGTGGCGGAACTTAACCCAGACGAGAACTGTATCCGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS GCA 72 bp | TCCCCAATGCCAAACACATTCGGGTATTTCTTATGCTaGAGAGTCTCTTTGTCCACGTCCACCCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPMPNTFGYFLC*RVSLSTSTQPA Trigger: TGCTGGCTGGGTGGACGTGGACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS GCA 72 bp | CAGTCCCCAATGCCAAACACATTCGGGTATTTCTTATaGTGCAGAGTCTCTTTGTCCACGTCCACCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QSPMPNTFGYFL*CRVSLSTSTQP Trigger: TGGCTGGGTGGACGTGGACAAAGAGACTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS TCA 72 bp | CAGTTCTCGTCTGGGTTAAGTTCCGCCACTCTATCTTaGATCCACTGCACTCCGGATGGAATCACACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QFSSGLSSATLS*IHCTPDGITLS Trigger: ACTGAGTGTGATTCCATCCGGAGTGCAGTGGATTCAAGATAGAGTGGCGGAACTTAACCCAGACGAGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS CCA 72 bp | AGCAGAATCAGCCACAGGACTCCTCTTGAGGACATCTaGTGCACTCATAGGTGGTGTGACATGAAGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: SRISHRTPLEDI*CTHRWCDMKHF Trigger: GAAATGCTTCATGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGATTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CAA 72 bp | ACAGTTCTCGTCTGGGTTAAGTTCCGCCACTCTATCTaGAATCCACTGCACTCCGGATGGAATCACACTCAG | + |
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Preference number: 6 (lower is better) Translates to: TVLVWVKFRHSI*NPLHSGWNHTQ Trigger: CTGAGTGTGATTCCATCCGGAGTGCAGTGGATTCAAGATAGAGTGGCGGAACTTAACCCAGACGAGAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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| CDS GCA 72 bp | AGAATCAGCCACAGGACTCCTCTTGAGGACATCTGGTaGACTCATAGGTGGTGTGACATGAAGCATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: RISHRTPLEDIW*THRWCDMKHFI Trigger: TATGAAATGCTTCATGTCACACCACCTATGAGTGCACCAGATGTCCTCAAGAGGAGTCCTGTGGCTGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS GCA 72 bp | CTACTGCAGCAGCAGTCTTTGAAGTTGGAAGATTGGTaGAGTCCCCAATGCCAAACACATTCGGGTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLQQQSLKLEDW*SPQCQTHSGIS Trigger: AGAAATACCCGAATGTGTTTGGCATTGGGGACTGCACCAATCTTCCAACTTCAAAGACTGCTGCTGCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS GCA 72 bp | CAGTCTTTGAAGTTGGAAGATTGGTGCAGTCCCCAATaGCAAACACATTCGGGTATTTCTTATGCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QSLKLEDWCSPQ*QTHSGISYAAE Trigger: CTCTGCAGCATAAGAAATACCCGAATGTGTTTGGCATTGGGGACTGCACCAATCTTCCAACTTCAAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000176343.2 |
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| CDS CCA 72 bp | CCTTCCATGTCTTCTCCACTGTCTTCACTGAGTAATTaGACCCTATTTTGGGATAAGCAAAGCCTTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: PSMSSPLSSLSN*TLFWDKQSLQV Trigger: TACCTGAAGGCTTTGCTTATCCCAAAATAGGGTCCAATTACTCAGTGAAGACAGTGGAGAAGACATGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005953.11 ENSMUST00000110506.9 ENSMUST00000126403.9 |
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