Pregenerated sensors for SPTY2D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049516Ensembl transcript IDs: ENSMUST00000061639.10
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACATTAGCGTGCATAGCTCATCAGGATCAAGGCCGGCACCCGTaGATGGCTAACTTCACAGAGCACATGGCCAGCATCGTATCATCT | + |
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Preference number: 1 (lower is better) Translates to: PTLACIAHQDQGRHP*MANFTEHMASIVSS Trigger: AGATGATACGATGCTGGCCATGTGCTCTGTGAAGTTAGCCATTCACGGGTGCCGGCCTTGATCCTGATGAGCTATGCACGCTAATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CCA 90 bp | AGGATCAAGGCCGGCACCCGTGAATGGCTAACTTCACAGAGCACATaGCCAGCATCGTATCATCTCCATTATAGGTTCCACCCTGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: RIKAGTREWLTSQST*PASYHLHYRFHPGL Trigger: TAGCCCAGGGTGGAACCTATAATGGAGATGATACGATGCTGGCCATGTGCTCTGTGAAGTTAGCCATTCACGGGTGCCGGCCTTGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 90 bp | CTTCCTTCCAGCCAGACCATACATCAGCCTGGATGGGCTCCAGGTTaGAATGGCATTAAGTCTGTCTGTAGGTCTGGCTTTAAGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LPSSQTIHQPGWAPG*NGIKSVCRSGFKQD Trigger: ATCCTGCTTAAAGCCAGACCTACAGACAGACTTAATGCCATTTCAACCTGGAGCCCATCCAGGCTGATGTATGGTCTGGCTGGAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR GCA 90 bp | TCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGCCTaGAAACGACAGTATGTATTCCTTCCTCTTGCGGGCCCAAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: STLGYLKTLHTQMIA*KRQYVFLPLAGPSV Trigger: CACACTTGGGCCCGCAAGAGGAAGGAATACATACTGTCGTTTGCAGGCTATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 90 bp | CTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATaGCTACATCCATCGCTTAGAGAAAATACAAAGACCAGTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LRAACDMWYPASKWT*LHPSLRENTKTSSE Trigger: TTCAGAACTGGTCTTTGTATTTTCTCTAAGCGATGGATGTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CCA 90 bp | TTAAGAAAGCCAGATACATTGTGGATCATCCCACAATCCAAATTCTaGCTGCTCCCAAACCTCCACACTCCAGTCTCTAGCATGTTATTT | + |
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Preference number: 1 (lower is better) Translates to: LRKPDTLWIIPQSKF*LLPNLHTPVSSMLF Trigger: AAATAACATGCTAGAGACTGGAGTGTGGAGGTTTGGGAGCAGCCAGAATTTGGATTGTGGGATGATCCACAATGTATCTGGCTTTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 90 bp | AATGCATTCATACATGAGAGATTACAACCTCACTCTACCAAGTTCTaGAACTTTAATCTAGCACAATGGCGCCTTTCTGTGCAAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: NAFIHERLQPHSTKF*NFNLAQWRLSVQTA Trigger: AGCTGTTTGCACAGAAAGGCGCCATTGTGCTAGATTAAAGTTTCAGAACTTGGTAGAGTGAGGTTGTAATCTCTCATGTATGAATGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 90 bp | GTTTTAAGGATTGGGTCAAATGGTCCCACAAAGGAAGGCAAAACATaGTTACCCATAATACTCAAGCTTAAGAATGAAGACATCATGGAC | + |
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Preference number: 1 (lower is better) Translates to: VLRIGSNGPTKEGKT*LPIILKLKNEDIMD Trigger: GTCCATGATGTCTTCATTCTTAAGCTTGAGTATTATGGGTAATCATGTTTTGCCTTCCTTTGTGGGACCATTTGACCCAATCCTTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCAAAGGCAGGTGATCCTTaGAGTGTCCCTTCCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: DQLPGEWSHISVHSSSGSKAGDP*SVPSRI Trigger: GATTCTGGAAGGGACACTGCAAGGATCACCTGCCTT...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACCTAAGGAAGTCAGACTaGGATCTGGGTGGTACCCTA | + |
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Preference number: 2 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYLRKSD*DLGGTL Trigger: TAGGGTACCACCCAGATCGCAGTCTGACTTCCTTAG...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACAATGGCGCCTTTCTGTaGAAACAGCTGCACCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYNGAFL*KQLHPE Trigger: TTCAGGGTGCAGCTGTTTGCACAGAAAGGCGCCATT...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACTTTAGCAAGGGACTGTaGAATCAGAGCCATGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYFSKGL*NQSHEF Trigger: GAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAA...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATGCCGGCACCCGTGAATaGCTAACTTCACAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: ALCFSKGLCNQSHEFHENAGTRE*LTSQST Trigger: TGTGCTCTGTGAAGTTAGCCATTCACGGGTGCCGGC...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACTTCTGTGCAAACAGCTaGACCCTGAAATTGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYFCANS*TLKLST Trigger: TGTACTCAATTTCAGGGTGCAGCTGTTTGCACAGAA...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CAA 90 bp | TCTAGCACAATGGCGCCTTTCTGTGCAAACAGCTGCACCCTGAAATaGAGTACAGTAAACTTTCAGCCACCAGTAACTTTGACCGCAATT | + |
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Preference number: 2 (lower is better) Translates to: SSTMAPFCANSCTLK*STVNFQPPVTLTAI Trigger: AATTGCGGTCAAAGTTACTGGTGGCTGAAAGTTTACTGTACTCAATTTCAGGGTGCAGCTGTTTGCACAGAAAGGCGCCATTGTGCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATGCTTCCCACCCCTCATaGCTTAACAGTTTAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ALCFSKGLCNQSHEFHENASHPS*LNSLRK Trigger: CTTTCTTAAACTGTTAAGCCATGAGGGGTGGGAAGC...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGGACAGGTCACTTTATTaGTGGCAGCATTCACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AKNEMLTINIKRYRGTLGDRSLY*WQHSQK Trigger: CTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTC...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAAGCTTGGAAGGAAAACTaGAAAAGAACATTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQAWKEN*KRTFFF Trigger: GAAGAAGAATGTTCTTTTCCAGTTTTCCTTCCAAGC...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | GCGTGCATAGCTCATCAGGATCAAGGCCGGCACCCGTaGATGGCTAACTTCACAGAGCACATGGCCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: ACIAHQDQGRHP*MANFTEHMASI Trigger: GATGCTGGCCATGTGCTCTGTGAAGTTAGCCATTCACGGGTGCCGGCCTTGATCCTGATGAGCTATGCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR GCA 72 bp | CACAGAAGGGCCAGGCCCTTCCTAAGGAAGTCAGACTaGGATCTGGGTGGTACCCTACTCACACATCAATCT | + |
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Preference number: 3 (lower is better) Translates to: HRRARPFLRKSD*DLGGTLLTHQS Trigger: AGATTGATGTGTGAGTAGGGTACCACCCAGATCGCAGTCTGACTTCCTTAGGAAGGGCCTGGCCCTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | AGTGTGAATCTAATCCGGGAAGAGGCTTGCTCAGTCTaGAGGCAGGTGATCCTTGCAGTGTCCCTTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SVNLIREEACSV*RQVILAVSLPE Trigger: TTCTGGAAGGGACACTGCAAGGATCACCTGCCTTCAGACTGAGCAAGCCTCTTCCCGGATTAGATTCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR GCA 72 bp | GATAGCCTGCAAACGACAGTATGTATTCCTTCCTCTTaGGGGCCCAAGTGTGAATCTAATCCGGGAAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: DSLQTTVCIPSS*GPKCESNPGRG Trigger: GCCTCTTCCCGGATTAGATTCACACTTGGGCCCGCAAGAGGAAGGAATACATACTGTCGTTTGCAGGCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | AGCCAGACCATACATCAGCCTGGATGGGCTCCAGGTTaGAATGGCATTAAGTCTGTCTGTAGGTCTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SQTIHQPGWAPG*NGIKSVCRSGF Trigger: AAAGCCAGACCTACAGACAGACTTAATGCCATTTCAACCTGGAGCCCATCCAGGCTGATGTATGGTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CCA 72 bp | CCAGATACATTGTGGATCATCCCACAATCCAAATTCTaGCTGCTCCCAAACCTCCACACTCCAGTCTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: PDTLWIIPQSKF*LLPNLHTPVSS Trigger: GCTAGAGACTGGAGTGTGGAGGTTTGGGAGCAGCCAGAATTTGGATTGTGGGATGATCCACAATGTATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CCA 72 bp | CAGGCCCTTCCTAAGGAAGTCAGACTGCGATCTGGGTaGTACCCTACTCACACATCAATCTTTTTCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QALPKEVRLRSG*YPTHTSIFFSF Trigger: AAAGGAGAAAAAGATTGATGTGTGAGTAGGGTACCACCCAGATCGCAGTCTGACTTCCTTAGGAAGGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR CAA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACTTATTTCATTTTCTGTaGCTGACTGTCCTTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYLFHFL*LTVLET Trigger: TGTCTCAAGGACAGTCAGCAACAGAAAATGAAATAA...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR-3UTR CAA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACAATGGAAGACATGATTaGGACTTACAATCTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYNGRHD*DLQSFL Trigger: CAGGAAAGATTGTAAGTCCAAATCATGTCTTCCATT...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR CCA 72 bp | CTTTGTAGGATAGCCTCTCTGGCTTCCCACCCCTCATaGCTTAACAGTTTAAGAAAGCCAGATACATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LCRIASLASHPS*LNSLRKPDTLW Trigger: CCACAATGTATCTGGCTTTCTTAAACTGTTAAGCCATGAGGGGTGGGAAGCCAGAGAGGCTATCCTACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | GCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATaGCTACATCCATCGCTTAGAGAAAATACAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: ACDMWYPASKWT*LHPSLRENTKT Trigger: GGTCTTTGTATTTTCTCTAAGCGATGGATGTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR GCA 72 bp | GGCTATTTAAAAACACTGCACACTCAAATGATAGCCTaGAAACGACAGTATGTATTCCTTCCTCTTGCGGGC | + |
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Preference number: 3 (lower is better) Translates to: GYLKTLHTQMIA*KRQYVFLPLAG Trigger: GCCCGCAAGAGGAAGGAATACATACTGTCGTTTGCAGGCTATCATTTGAGTGTGCAGTGTTTTTAAATAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | AGACATCATGGACAAATGCATAAAGTCTGGACCTGTTaGAAAGTAAGAATTCTTTGTAGGATAGCCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RHHGQMHKVWTC*KVRILCRIASL Trigger: CAGAGAGGCTATCCTACAAAGAATTCTTACTTTTCAACAGGTCCAGACTTTATGCATTTGTCCATGATGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| 3UTR TCA 72 bp | AAAAGTGCAACGCGGACAAAGAGAAGGTGGTATTCCTaGTACACTAAACATTTGGCTTTTTGGTTATTAACA | + |
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Preference number: 3 (lower is better) Translates to: KSATRTKRRWYS*YTKHLAFWLLT Trigger: TGTTAATAACCAAAAAGCCAAATGTTTAGTGTATCAGGAATACCACCTTCTCTTTGTCCGCGTTGCACTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTTCGCCCAGGGCCACTTaGGCTGCTTGCAGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPSPRAT*AACRSS Trigger: GGACGACCTGCAAGCAGCTCAAGTGGCCCTGGGCGA...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACGGGTCGAGCTGTCCCTaGGTTAGGCTGCCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYGSSCP*VRLPRS Trigger: GCTCCTGGGCAGCCTAACCCAGGGACAGCTCGACCC...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCACTTTGGGACACTTGGTaGACAGGTGCTGGGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: DQLPGEWSHISVHSSSGSLWDTW*TGAGAG Trigger: CCCCGCCCCAGCACCTGTTCACCAAGTGTCCCAAAG...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCAAACCAGCAGATCCACTaGTGGGTCGCCCAGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DQLPGEWSHISVHSSSGSNQQIH*WVAQGH Trigger: GTGGCCCTGGGCGACCCATCAGTGGATCTGCTGGTT...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTGTCCCTGGGTTAGGCTaGCCAGGAGCAGAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPVPGLG*PGAEPE Trigger: CTCTGGCTCTGCTCCTGGGCAGCCTAACCCAGGGAC...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACTTGGTGAACAGGTGCTaGGGCGGGGCTTTCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYLVNRC*GGAFQP Trigger: GGGCTGGAAAGCCCCGCCCCAGCACCTGTTCACCAA...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACGGATTGTTTACAGGCTaGCCGGGGCCTCCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYGLFTG*PGPPEL Trigger: CAGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCC...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTTCCTGGTCAGTTCCCTaGTTCAGGTGGCTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPSWSVP*FRWLST Trigger: GGTGGAGAGCCACCTGAACCAGGGAACTGACCAGGA...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCAAGACAACAGTACATCTaGGCTTTGTGGGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DQLPGEWSHISVHSSSGSRQQYI*ALWGGL Trigger: CAGGCCTCCCCACAAAGCCCAGATGTACTGTTGTCT...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAATCTCCCAGGGCCACTaGCTGCCCGCCCAGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSISQGH*LPAQES Trigger: GCTCTCCTGGGCGGGCAGTCAGTGGCCCTGGGAGAT...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACTGGCTCTCCACCAGCTaGTTCTTCTTTGTCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYWLSTS*FFFVFS Trigger: GGAAAAGACAAAGAAGAAGCAGCTGGTGGAGAGCCA...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATGAAGTGAGGGCTGGGTaGTACTGCCAGACCCTACCT | + |
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Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENEVRAG*YCQTLP Trigger: AGGTAGGGTCTGGCAGTAGCACCCAGCCCTCACTTC...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATACTGGAGCTGCCGTTCTaGCGCCTGGGCACAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMILELPF*RLGTGP Trigger: TGGCCCTGTGCCCAGGCGCCAGAACGGCAGCTCCAG...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACGCTAAGACTGTTCATTaGTCGTCGAAGGTCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYAKTVH*SSKVMW Trigger: CCACATGACCTTCGACGACCAATGAACAGTCTTAGC...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGGTCCTGAGCTGGAGCTaGCGTTCTGGCGCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGVLSWS*RSGAWA Trigger: TGCCCAGGCGCCAGAACGGCAGCTCCAGCTCAGGAC...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAGCTCAGGTCCTGAGCTaGAGCTGCCGTTCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSAQVLS*SCRSGA Trigger: GGCGCCAGAACGGCAGCTCCAGCTCAGGACCTGAGC...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCACAAGTCTTAAACTCTTaGCTTCCTCCTTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQLPGEWSHISVHSSSGSQVLNS*LPPSAA Trigger: AGCAGCAGAAGGAGGAAGCCAAGAGTTTAAGACTTG...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATTGGCCGTGCTGGGTCTaGATTTCTTCTCAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENWPCWV*ISSQLE Trigger: CTCAAGCTGAGAAGAAATTCAGACCCAGCACGGCCA...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCACGGGGCCTCCAGAACTaGCCACAGGTCTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSRGLQN*PQVSQN Trigger: GTTCTGGGAGACCTGTGGGCAGTTCTGGAGGCCCCG...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAATGCCAGACCCTACCTTaGTCCTCTCGCCTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQCQTLP*SSRLAG Trigger: CCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGGCA...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAAAGACAGGCCTGTTGTaGCCCTCCCGAAGTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSKTGLL*PSRSEG Trigger: GCCCTCACTTCGGGAGGGTCACAACAGGCCTGTCTT...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCACTCCCTCAGTTCCTCTaGAGTCAGGGGCCGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSLPQFL*SQGPVF Trigger: GAAGACCGGCCCCTGACTGCAGAGGAACTGAGGGAG...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAATCCCGAAGTGAGGGCTaGGTGCTACTGCCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQSRSEG*VLLPDP Trigger: AGGGTCTGGCAGTAGCACCCAGCCCTCACTTCGGGA...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATCCCATGATGTCTTTATaGGAGGGCGCCTTTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENPMMSL*EGAFFN Trigger: GTTGAAAAAGGCGCCCTCTCATAAAGACATCATGGG...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATACCTTTGGAAGCAAGCTaGCTGTCCCCAGCACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIPLEAS*LSPAPL Trigger: CAGAGGTGCTGGGGACAGGCAGCTTGCTTCCAAAGG...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGCCGTGGGTCCAGGCTTaGAATGGCTCGGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGPWVQA*NGSDEK Trigger: CTTCTCATCCGAGCCATTCCAAGCCTGGACCCACGG...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| 3UTR CAA 72 bp | TTTCAATTCAAACATAGACTAGGACAGGTCACTTTATaGCTGGCAGCATTCACAGAAGGGCCAGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQFKHRLGQVTL*LAAFTEGPGPS Trigger: GGAAGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCTATGTTTGAATTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATCCTGATTGTAGTCTATaGAGTCTTCCTCCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENPDCSL*SLPPPH Trigger: ATGTGGAGGAGGAAGACTTCATAGACTACAATCAGG...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGCCTCAGTAAGTCAGTaGAGTTCATGGGTGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIASVSQ*SSWVTG Trigger: CCCCGTCACCCATGAACTTCACTGACTTACTGAGGC...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATACGCCTAAGGAAAGCTTaGACAGCTGCCGACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIRLRKA*TAADWT Trigger: TGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCG...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCATGTGTGAGAGAACCGTaGGTCCAGGCTTGGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSCVREP*VQAWNG Trigger: GCCATTCCAAGCCTGGACCCACGGTTCTCTCACACA...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAGCCAGAGTTGCTGCCTaGTTGTCTGACACCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSARVAA*LSDTWT Trigger: AGTCCAGGTGTCAGACAACCAGGCAGCAACTCTGGC...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATGTCGCTTCAGCTTCTTaGCTTTTCGACGTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENVASAS*LFDVSV Trigger: AACTGAAACGTCGAAAAGCCAAGAAGCTGAAGCGAC...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| 3UTR CAA 72 bp | ATGGCGCCTTTCTGTGCAAACAGCTGCACCCTGAAATaGAGTACAGTAAACTTTCAGCCACCAGTAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MAPFCANSCTLK*STVNFQPPVTL Trigger: CAAAGTTACTGGTGGCTGAAAGTTTACTGTACTCAATTTCAGGGTGCAGCTGTTTGCACAGAAAGGCGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATCTTTCTTCACTACCTTaGTCTCCACTGGTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENLSSLP*SPLVQT Trigger: AGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAG...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGTCAGAAGCAGATTTCTaGGTCCCGCTAGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGSEADF*VPLAGV Trigger: GACTCCTGCTAGCGGGACTCAGAAATCTGCTTCTGA...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATATTCCAGGGCCTGAATTaGCAGTTCGTCCAGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIFQGLN*QFVQLE Trigger: TTCCAGCTGGACGAACTGTCAATTCAGGCCCTGGAA...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAAGAAAGCTTGCACAGCTaGCGACTGGACACCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQESLHS*RLDTFH Trigger: GTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTC...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAATTGGCTTCCTCCTTCTaGTGCTCCTTCCAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQLASSF*CSFQLL Trigger: GAGCAGTTGGAAGGAGCAGCAGAAGGAGGAAGCCAA...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAATGCACAGCTGCCGACTaGACACCTTTCACTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQCTAAD*TPFTFG Trigger: CCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCA...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAGCTTTCAGCCTTGGGTaGCTCTTGCTCCTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSAFSLG*LLLLLI Trigger: TATGAGGAGGAGCAAGAGCCACCCAAGGCTGAAAGC...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGTTTGCTTTCAGCCTTaGGTGGCTCTTGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIVCFQP*VALAPP Trigger: AGGAGGAGCAAGAGCCACCCAAGGCTGAAAGCAAAC...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR TCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCATGGGCTTTGTACCCATaGTGTCTTTATGAGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSWALYP*CLYERA Trigger: CGCCCTCTCATAAAGACATCATGGGTACAAAGCCCA...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCACAGGGGCCGGTCTTCTaGTTTCTTCACTACCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSQGPVF*FLHYLD Trigger: ATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTG...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGGCTGCTCCTTCCAACTaGTCTCCATGTAACGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGAAPSN*SPCNVR Trigger: CCTTACGTTACATGGAGAGCAGTTGGAAGGAGCAGC...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR GCA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATTCCTCTAAGTCCTCTTaGATACCAAGTCTTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ALCFSKGLCNQSHEFHENSSKSS*IPSLKL Trigger: GAGTTTAAGACTTGGTATGCAAGAGGACTTAGAGGA...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATATCCACATCATACTCCTaGTCAGTTCCCTGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMISTSYS*SVPWFR Trigger: CCTGAACCAGGGAACTGACCAGGAGTATGATGTGGA...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGTCCACTGGTTCAAACTaGTTCTTCTCAGCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGSTGSN*FFSASL Trigger: GAGGCTAGCTGAGAAGAAGCAGTTTGAACCAGTGGA...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATATTCGTCCAGCTGGAATaGAACCACTTATGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIFVQLE*NHLWIS Trigger: GGAGATCCATAAGTGGTTCCATTCCAGCTGGACGAA...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CCA 90 bp | TTAAGCAGGATAGAACGTAAGAAGGTTTCACACCAACAGGAAACATTCTCTTCAGACAGTTCGTCCAGCTaGAATGGAACCACTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRIERKKVSHQQETFSSDSSSS*NGTTYG Trigger: TCCATAAGTGGTTCCATTCCAGCTGGACGAACTGTC...TGAAGAGAATGTTTCCTGTTGGTGTGAAACCTTCTTACGTTCTATCCTGCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR TCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATATTGGATATTTCTTCCTaGGGTTCTCCTTCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMILDISS*GSPSSS Trigger: CGAAGATGAAGGAGAACCTCAGGAAGAAATATCCAA...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR CCA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGTTTCTCGAATGTGCTTaGATATTTCTTCCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKNEMLTINIKRYRGTLGFLECA*IFLPEV Trigger: AACCTCAGGAAGAAATATCCAAGCACATTCGAGAAA...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS-3UTR GCA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGGTTTCTTTTTCCTATaGTTTCGTTCAAGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIGFFFL*FRSRNS Trigger: AGAGTTTCTTGAACGAAAGCATAGGAAAAAGAAACC...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS CCA 90 bp | ATCCCACCGGCTGACTGCTCAGGTCCTGAGCTGGAGCTGCCGTTCTaGCGCCTGGGCACAGGGCCAGAACTAAGTGTGGGTCGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPPADCSGPELELPF*RLGTGPELSVGRAV Trigger: GACAGCTCGACCCACACTTAGTTCTGGCCCTGTGCCCAGGCGCCAGAACGGCAGCTCCAGCTCAGGACCTGAGCAGTCAGCCGGTGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS GCA 90 bp | AGACAGGCCTGTTGTGACCCTCCCGAAGTGAGGGCTGGGTGCTACTaGCAGACCCTACCTTGGTCCTCTCGCCTGGCAGGGATTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQACCDPPEVRAGCY*QTLPWSSRLAGIWV Trigger: CACCCAAATCCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGGCAGTAGCACCCAGCCCTCACTTCGGGAGGGTCACAACAGGCCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS CCA 90 bp | CCCAGGGCCACTGACTGCCCGCCCAGGAGAGCTAAGACTGTTCATTaGTCGTCGAAGGTCATGTGGATTGTTTACAGGCTGCCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRATDCPPRRAKTVH*SSKVMWIVYRLPGA Trigger: GGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAATGAACAGTCTTAGCTCTCCTGGGCGGGCAGTCAGTGGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS GCA 90 bp | ACAGGGCCAGAACTAAGTGTGGGTCGAGCTGTCCCTGGGTTAGGCTaGCCAGGAGCAGAGCCAGAGTTGCTGCCTGGTTGTCTGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: TGPELSVGRAVPGLG*PGAEPELLPGCLTP Trigger: AGGTGTCAGACAACCAGGCAGCAACTCTGGCTCTGCTCCTGGGCAGCCTAACCCAGGGACAGCTCGACCCACACTTAGTTCTGGCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS TCA 90 bp | TCTCCCAGAACCAGCAGATCCACTGATGGGTCGCCCAGGGCCACTTaGGCTGCTTGCAGGTCGTCCAGGACCATTTGTGCCGTTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPRTSRSTDGSPRAT*AACRSSRTICAVEC Trigger: ACACTCAACGGCACAAATGGTCCTGGACGACCTGCAAGCAGCTCAAGTGGCCCTGGGCGACCCATCAGTGGATCTGCTGGTTCTGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS CCA 90 bp | CCGCCCAGGAGAGCTAAGACTGTTCATTGGTCGTCGAAGGTCATGTaGATTGTTTACAGGCTGCCCGGGGCCTCCAGAACTGCCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRRAKTVHWSSKVM*IVYRLPGASRTAHR Trigger: CCTGTGGGCAGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAATGAACAGTCTTAGCTCTCCTGGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS TCA 90 bp | ACTGCCAGACCCTACCTTGGTCCTCTCGCCTGGCAGGGATTTGGGTaGAGACAAAGCTGCTTGTTTCTCACTGGCCGTGCTGGGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TARPYLGPLAWQGFG*RQSCLFLTGRAGSE Trigger: TTCAGACCCAGCACGGCCAGTGAGAAACAAGCAGCTTTGTCTTCACCCAAATCCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | TCCAGCTGGAATGGAACCACTTATGGATCTCCCAGGGCCACTGACTaGCCGCCCAGGAGAGCTAAGACTGTTCATTGGTCGTCGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWNGTTYGSPRATD*PPRRAKTVHWSSKV Trigger: GACCTTCGACGACCAATGAACAGTCTTAGCTCTCCTGGGCGGGCAGTCAGTGGCCCTGGGAGATCCATAAGTGGTTCCATTCCAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 90 bp | AGCTCCTCTTCTTTCCGCCTAAGGAAAGCTTGCACAGCTGCCGACTaGACACCTTTCACTTTTGGGTCTTTCTTTGGAGGCCCCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSFRLRKACTAAD*TPFTFGSFFGGPTA Trigger: GGCGGTGGGGCCTCCAAAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTGGAGCAGAGCCAGAGTaGCTGCCTGGTTGTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPGAEPE*LPGCLT Trigger: TGTCAGACAACCAGGCAGCAACTCTGGCTCTGCTCC...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACGGAAAGGGCAATCCTTaGGAAGCAAGCTGCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYGKGNP*EASCLS Trigger: GGACAGGCAGCTTGCTTCCAAAGGATTGCCCTTTCC...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 90 bp | GTTGCTGCCTGGTTGTCTGACACCTGGACTCTTAGATTTGTTGTGTaGGAGAACCGTGGGTCCAGGCTTGGAATGGCTCGGATGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAWLSDTWTLRFVV*ENRGSRLGMARMRR Trigger: CCTTCTCATCCGAGCCATTCCAAGCCTGGACCCACGGTTCTCTCACACAACAAATCTAAGAGTCCAGGTGTCAGACAACCAGGCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCAAGAGTTGCTGCCTGGTaGTCTGACACCTGGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DQLPGEWSHISVHSSSGSRVAAW*SDTWTL Trigger: AAGAGTCCAGGTGTCAGACAACCAGGCAGCAACTCT...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GATCAGCTGCCTGGTGAGTGGTCCCACATTAGCGTGCATAGCTCATCAGGATCAGGACACCTTTCACTTTaGGGTCTTTCTTTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DQLPGEWSHISVHSSSGSGHLSL*GLSLEA Trigger: GGCCTCCAAAGAAAGACCCAAAAGTGAAAGGTGTCC...TGATCCTGATGAGCTATGCACGCTAATGTGGGACCACTCACCAGGCAGCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | CACTCAGGGCTGCCTGTGACATGTGGTACCCTGCCTCTAAATGGACATGACTACCCAAGTCTTAAACTCTaGGCTTCCTCCTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSGLPVTCGTLPLNGHDYPSLKL*ASSFCC Trigger: GCAGCAGAAGGAGGAAGCCAAGAGTTTAAGACTTGG...GTAGTCATGTCCATTTAGAGGCAGGGTACCACATGTCACAGGCAGCCCTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 90 bp | GTTCCTCTGCAGTCAGGGGCCGGTCTTCTGCTTTCTTCACTACCTTaGTCTCCACTGGTTCAAACTGCTTCTTCTCAGCTAGCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VPLQSGAGLLLSSLP*SPLVQTASSQLASV Trigger: TACTGAGGCTAGCTGAGAAGAAGCAGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | TTGTCTAAGCTCCTCTTCTTTCCGCCTAAGGAAAGCTTGCACAGCTaGCGACTGGACACCTTTCACTTTTGGGTCTTTCTTTGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSKLLFFPPKESLHS*RLDTFHFWVFLWRP Trigger: GGGCCTCCAAAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAGCTTAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | AAACTCTCGCTCCCTCAGTTCCTCTGCAGTCAGGGGCCGGTCTTCTaGTTTCTTCACTACCTTGATCTCCACTGGTTCAAACTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLSLPQFLCSQGPVF*FLHYLDLHWFKLLL Trigger: AAGAAGCAGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAACTGAGGGAGCGAGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTCTTTTCGGTACGTGGTaGACACCTTGTCCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPLFGTW*TPCPLE Trigger: TTCCAAAGGACAAGGTGTCAACCACGTACCGAAAAG...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATGAGTCTTTGGGACACTaGGTGAACAGGTGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALCFSKGLCNQSHEFHENESLGH*VNRCWG Trigger: GCCCCAGCACCTGTTCACCAAGTGTCCCAAAGACTC...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | TTTCCTATGCTTTCGTTCAAGAAACTCTCGCTCCCTCAGTTCCTCTaGAGTCAGGGGCCGGTCTTCTGCTTTCTTCACTACCTTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPMLSFKKLSLPQFL*SQGPVFCFLHYLDL Trigger: GAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAACTGAGGGAGCGAGAGTTTCTTGAACGAAAGCATAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | ACGGGTGGAGGTAGTTTGGCATCGGGTTCAGGTTTCTTTTTCCTATaGTTTCGTTCAAGAAACTCTCGCTCCCTCAGTTCCTCTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGGGSLASGSGFFFL*FRSRNSRSLSSSAV Trigger: GACTGCAGAGGAACTGAGGGAGCGAGAGTTTCTTGAACGAAAGCATAGGAAAAAGAAACCTGAACCCGATGCCAAACTACCTCCACCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAAGTCGCCCAGGGCCACTaGAGCTGCTTGCAGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQVAQGH*SCLQVV Trigger: GACGACCTGCAAGCAGCTCAAGTGGCCCTGGGCGAC...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GCCCTTTGCTTTAGCAAGGGACTGTGCAATCAGAGCCATGAGTTCCATGAAAATCTTCCAGGGCCTGAATaGACAGTTCGTCCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALCFSKGLCNQSHEFHENLPGPE*TVRPAG Trigger: TCCAGCTGGACGAACTGTCAATTCAGGCCCTGGAAG...ATTTTCATGGAACTCATGGCTCTGATTGCACAGTCCCTTGCTAAAGCAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGACTAGGACAGGTCACTTTATTGCTGGCAGCATTCACAGAAGGGCCAGGCCCTCTCTTCCAAGGCTTTTaGTCTAAGCTCCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLGQVTLLLAAFTEGPGPLFQGF*SKLLFF Trigger: AAAGAAGAGGAGCTTAGACAAAAAGCCTTGGAAGAG...AGGGCCTGGCCCTTCTGTGAATGCTGCCAGCAATAAAGTGACCTGTCCTAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAACCGCCTAAGGAAAGCTaGCACAGCTGCCGACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQPPKES*HSCRLD Trigger: GTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGG...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGGCCACTTGAGCTGCTaGCAGGTCGTCCAGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIGHLSC*QVVQDH Trigger: ATGGTCCTGGACGACCTGCAAGCAGCTCAAGTGGCC...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 90 bp | AAGGCTTTTTGTCTAAGCTCCTCTTCTTTCCGCCTAAGGAAAGCTTaGACAGCTGCCGACTGGACACCTTTCACTTTTGGGTCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KAFCLSSSSFRLRKA*TAADWTPFTFGSFF Trigger: AAAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAGCTTAGACAAAAAGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGAGCCTTGGGTGGCTCTaGCTCCTCCTCATAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKNEMLTINIKRYRGTLGSLGWL*LLLIVL Trigger: CAGGACTATGAGGAGGAGCAAGAGCCACCCAAGGCT...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | GCTAAAAATGAAATGTTAACTATTAACATCAAGAGGTACAGGGGCACCTTAGGGGGTTTGCTTTCAGCCTaGGGTGGCTCTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKNEMLTINIKRYRGTLGGLLSA*GGSCSS Trigger: GGAGGAGCAAGAGCCACCCAAGGCTGAAAGCAAACC...CCCTAAGGTGCCCCTGTACCTCTTGATGTTAATAGTTAACATTTCATTTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATACAGTACATCTGGGCTTaGTGGGGAGGCCTGGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIQYIWA*WGGLGY Trigger: GTAACCCAGGCCTCCCCACAAAGCCCAGATGTACTG...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 90 bp | TGTCTTTATGAGAGGGCGCCTTTTTCAACACGGGTGGAGGTAGTTTaGCATCGGGTTCAGGTTTCTTTTTCCTATGCTTTCGTTCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLYERAPFSTRVEVV*HRVQVSFSYAFVQE Trigger: TTCTTGAACGAAAGCATAGGAAAAAGAAACCTGAACCCGATGCCAAACTACCTCCACCCGTGTTGAAAAAGGCGCCCTCTCATAAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATACTTTTGGGTCTTTCTTaGGAGGCCCCACCGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMILLGLS*EAPPPN Trigger: GTTTGGCGGTGGGGCCTCCAAAGAAAGACCCAAAAG...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAAGGGAAGGGAAGCCTTaGAGGACCTTGAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIREGKP*RTLSRS Trigger: AGATCTGCTCAAGGTCCTCAAAGGCTTCCCTTCCCT...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAAAGCCTTTGAGGACCTaGAGCAGATCTGTAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIKPLRT*SRSVAR Trigger: TCTGGCTACAGATCTGCTCAAGGTCCTCAAAGGCTT...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGGGGCCAAAATACATGTTGCTTGCTAATCTTTAAACTACCCTTTCAATTGACACCTTGTCCTTaGGAAGCGATCAAGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SRRGQNTCCLLIFKLPFQLTPCP*EAIKRI Trigger: AATCCTCTTGATCGCTTCCAAAGGACAAGGTGTCAA...TTGAAAGGGTAGTTTAAAGATTAGCAAGCAACATGTATTTTGGCCCCTTCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS-3UTR CAA 90 bp | TCCATTATAGGTTCCACCCTGGGCTATTTAAAAACACTGCACACTCAAATGATAGAATTTCTTCTCAGCTaGAGGAAAGGGCAATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SIIGSTLGYLKTLHTQMIEFLLS*RKGQSF Trigger: AAAGGATTGCCCTTTCCTCAAGCTGAGAAGAAATTC...TATCATTTGAGTGTGCAGTGTTTTTAAATAGCCCAGGGTGGAACCTATAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | TGTTGTGACCCTCCCGAAGTGAGGGCTGGGTGCTACTaGCAGACCCTACCTTGGTCCTCTCGCCTGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCDPPEVRAGCY*QTLPWSSRLAG Trigger: CCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGGCAGTAGCACCCAGCCCTCACTTCGGGAGGGTCACAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | CAGGCCTGTTGTGACCCTCCCGAAGTGAGGGCTGGGTaGTACTGCCAGACCCTACCTTGGTCCTCTCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QACCDPPEVRAG*YCQTLPWSSRL Trigger: CAGGCGAGAGGACCAAGGTAGGGTCTGGCAGTAGCACCCAGCCCTCACTTCGGGAGGGTCACAACAGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 72 bp | GCTGACTGCTCAGGTCCTGAGCTGGAGCTGCCGTTCTaGCGCCTGGGCACAGGGCCAGAACTAAGTGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ADCSGPELELPF*RLGTGPELSVG Trigger: ACCCACACTTAGTTCTGGCCCTGTGCCCAGGCGCCAGAACGGCAGCTCCAGCTCAGGACCTGAGCAGTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | CGGGGCTTTCCAGCCCCATTGAAGACAGGCCTGTTGTaGCCCTCCCGAAGTGAGGGCTGGGTGCTACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGFPAPLKTGLL*PSRSEGWVLLP Trigger: TGGCAGTAGCACCCAGCCCTCACTTCGGGAGGGTCACAACAGGCCTGTCTTCAATGGGGCTGGAAAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | GAATTGCTGGCCAGCTTTCTGATCCCACCGGCTGACTaGTCAGGTCCTGAGCTGGAGCTGCCGTTCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ELLASFLIPPAD*SGPELELPFWR Trigger: GCGCCAGAACGGCAGCTCCAGCTCAGGACCTGAGCAGTCAGCCGGTGGGATCAGAAAGCTGGCCAGCAATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | ACCAGCAGATCCACTGATGGGTCGCCCAGGGCCACTTaGGCTGCTTGCAGGTCGTCCAGGACCATTTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSRSTDGSPRAT*AACRSSRTICA Trigger: GGCACAAATGGTCCTGGACGACCTGCAAGCAGCTCAAGTGGCCCTGGGCGACCCATCAGTGGATCTGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | CCCATTGAAGACAGGCCTGTTGTGACCCTCCCGAAGTaGGGGCTGGGTGCTACTGCCAGACCCTACCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PIEDRPVVTLPK*GLGATARPYLG Trigger: ACCAAGGTAGGGTCTGGCAGTAGCACCCAGCCCTCACTTCGGGAGGGTCACAACAGGCCTGTCTTCAATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | GGGGGCCTTTGGTTTGCTTTCAGCCTTGGGTGGCTCTaGCTCCTCCTCATAGTCCTGGTCCAGCTCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLWFAFSLGWL*LLLIVLVQLSL Trigger: CAGGCTGAGCTGGACCAGGACTATGAGGAGGAGCAAGAGCCACCCAAGGCTGAAAGCAAACCAAAGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | GTGCTACTGCCAGACCCTACCTTGGTCCTCTCGCCTGGCAGGGATTaGGGTGAAGACAAAGCTGCTTGTTTCTCACTGGCCGTGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLPDPTLVLSPGRD*GEDKAACFSLAVLG Trigger: ACCCAGCACGGCCAGTGAGAAACAAGCAGCTTTGTCTTCACCCAAATCCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGGCAGTAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | TTCGTCCGGAGAGATGTGAATTGCTGGCCAGCTTTCTaGTCCCACCGGCTGACTGCTCAGGTCCTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FVRRDVNCWPAF*SHRLTAQVLSW Trigger: CCAGCTCAGGACCTGAGCAGTCAGCCGGTGGGATCAGAAAGCTGGCCAGCAATTCACATCTCTCCGGACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | ATTGGTCGTCGAAGGTCATGTGGATTGTTTACAGGCTaGCCGGGGCCTCCAGAACTGCCCACAGGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: IGRRRSCGLFTG*PGPPELPTGLP Trigger: TGGGAGACCTGTGGGCAGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | GGGCCACTTGAGCTGCTTGCAGGTCGTCCAGGACCATTTGTGCCGTaGAGTGTTCGTCCGGAGAGATGTGAATTGCTGGCCAGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPLELLAGRPGPFVP*SVRPERCELLASFL Trigger: CAGAAAGCTGGCCAGCAATTCACATCTCTCCGGACGAACACTCAACGGCACAAATGGTCCTGGACGACCTGCAAGCAGCTCAAGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | CCAGGAGAGCTAAGACTGTTCATTGGTCGTCGAAGGTCATGTGGATaGTTTACAGGCTGCCCGGGGCCTCCAGAACTGCCCACAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGELRLFIGRRRSCG*FTGCPGPPELPTGL Trigger: GAGACCTGTGGGCAGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAATGAACAGTCTTAGCTCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | GCTCGTCCAGGGCCTAGGCTGCTCACTGGTCTTCCAGGGCCTGAATaGACAGTTCGTCCAGCTGGAATGGAACCACTTATGGATCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARPGPRLLTGLPGPE*TVRPAGMEPLMDLP Trigger: TGGGAGATCCATAAGTGGTTCCATTCCAGCTGGACGAACTGTCAATTCAGGCCCTGGAAGACCAGTGAGCAGCCTAGGCCCTGGACGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
||
| CDS CAA 72 bp | CCAGACCCTACCTTGGTCCTCTCGCCTGGCAGGGATTaGGGTGAAGACAAAGCTGCTTGTTTCTCACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDPTLVLSPGRD*GEDKAACFSLA Trigger: GGCCAGTGAGAAACAAGCAGCTTTGTCTTCACCCAAATCCCTGCCAGGCGAGAGGACCAAGGTAGGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | GAGCTGCTTGCAGGTCGTCCAGGACCATTTGTGCCGTaGAGTGTTCGTCCGGAGAGATGTGAATTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ELLAGRPGPFVP*SVRPERCELLA Trigger: GGCCAGCAATTCACATCTCTCCGGACGAACACTCAACGGCACAAATGGTCCTGGACGACCTGCAAGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | GCCTGTCCCCAGCACCTCTGCTGGGCTTTGTACCCATaGTGTCTTTATGAGAGGGCGCCTTTTTCAACACGG | + |
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Preference number: 6 (lower is better) Translates to: ACPQHLCWALYP*CLYERAPFSTR Trigger: CCGTGTTGAAAAAGGCGCCCTCTCATAAAGACATCATGGGTACAAAGCCCAGCAGAGGTGCTGGGGACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | AGCTGCTTGCAGGTCGTCCAGGACCATTTGTGCCGTTaGGTGTTCGTCCGGAGAGATGTGAATTGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SCLQVVQDHLCR*VFVRRDVNCWP Trigger: TGGCCAGCAATTCACATCTCTCCGGACGAACACTCAACGGCACAAATGGTCCTGGACGACCTGCAAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | CTAAGACTGTTCATTGGTCGTCGAAGGTCATGTGGATaGTTTACAGGCTGCCCGGGGCCTCCAGAACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LRLFIGRRRSCG*FTGCPGPPELP Trigger: GGGCAGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAATGAACAGTCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | GAGCCAGAGTTGCTGCCTGGTTGTCTGACACCTGGACTCTTAGATTaGTTGTGTGAGAGAACCGTGGGTCCAGGCTTGGAATGGCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: EPELLPGCLTPGLLD*LCERTVGPGLEWLG Trigger: TCCGAGCCATTCCAAGCCTGGACCCACGGTTCTCTCACACAACAAATCTAAGAGTCCAGGTGTCAGACAACCAGGCAGCAACTCTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 72 bp | AGCTTGCACAGCTGCCGACTGGACACCTTTCACTTTTaGGTCTTTCTTTGGAGGCCCCACCGCCAAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLHSCRLDTFHF*VFLWRPHRQTV Trigger: TACAGTTTGGCGGTGGGGCCTCCAAAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | TGCTTGTTTCTCACTGGCCGTGCTGGGTCTGAATTTCTTCTCAGCTaGAGGAAAGGGCAATCCTTTGGAAGCAAGCTGCCTGTCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLFLTGRAGSEFLLS*RKGQSFGSKLPVPS Trigger: GCTGGGGACAGGCAGCTTGCTTCCAAAGGATTGCCCTTTCCTCAAGCTGAGAAGAAATTCAGACCCAGCACGGCCAGTGAGAAACAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | GCACCTCTGCTGGGCTTTGTACCCATGATGTCTTTATaGGAGGGCGCCTTTTTCAACACGGGTGGAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: APLLGFVPMMSL*EGAFFNTGGGS Trigger: ACTACCTCCACCCGTGTTGAAAAAGGCGCCCTCTCATAAAGACATCATGGGTACAAAGCCCAGCAGAGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | TGGTTGTCTGACACCTGGACTCTTAGATTTGTTGTGTaGGAGAACCGTGGGTCCAGGCTTGGAATGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: WLSDTWTLRFVV*ENRGSRLGMAR Trigger: CCGAGCCATTCCAAGCCTGGACCCACGGTTCTCTCACACAACAAATCTAAGAGTCCAGGTGTCAGACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | CTCCCTCAGTTCCTCTGCAGTCAGGGGCCGGTCTTCTaGTTTCTTCACTACCTTGATCTCCACTGGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LPQFLCSQGPVF*FLHYLDLHWFK Trigger: TTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAACTGAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | CTTTCGTTCAAGAAACTCTCGCTCCCTCAGTTCCTCTaGAGTCAGGGGCCGGTCTTCTGCTTTCTTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: LSFKKLSLPQFL*SQGPVFCFLHY Trigger: GTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAACTGAGGGAGCGAGAGTTTCTTGAACGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 72 bp | AGAGCTAAGACTGTTCATTGGTCGTCGAAGGTCATGTaGATTGTTTACAGGCTGCCCGGGGCCTCCAGAACT | + |
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Preference number: 6 (lower is better) Translates to: RAKTVHWSSKVM*IVYRLPGASRT Trigger: AGTTCTGGAGGCCCCGGGCAGCCTGTAAACAATCCACATGACCTTCGACGACCAATGAACAGTCTTAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | GGCCCCACCGCCAAACTGTACCTTTTCGGTACGTGGTaGACACCTTGTCCTTTGGAAGCGATCAAGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: GPTAKLYLFGTW*TPCPLEAIKRI Trigger: AATCCTCTTGATCGCTTCCAAAGGACAAGGTGTCAACCACGTACCGAAAAGGTACAGTTTGGCGGTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | CTCACTGGCCGTGCTGGGTCTGAATTTCTTCTCAGCTaGAGGAAAGGGCAATCCTTTGGAAGCAAGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTGRAGSEFLLS*RKGQSFGSKLP Trigger: AGGCAGCTTGCTTCCAAAGGATTGCCCTTTCCTCAAGCTGAGAAGAAATTCAGACCCAGCACGGCCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | CTGCCTGGTTGTCTGACACCTGGACTCTTAGATTTGTaGTGTGAGAGAACCGTGGGTCCAGGCTTGGAATGG | + |
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Preference number: 6 (lower is better) Translates to: LPGCLTPGLLDL*CERTVGPGLEW Trigger: CCATTCCAAGCCTGGACCCACGGTTCTCTCACACAACAAATCTAAGAGTCCAGGTGTCAGACAACCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | AGTTCCTCTGCAGTCAGGGGCCGGTCTTCTGCTTTCTTCACTACCTaGATCTCCACTGGTTCAAACTGCTTCTTCTCAGCTAGCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSSAVRGRSSAFFTT*ISTGSNCFFSASLS Trigger: ACTGAGGCTAGCTGAGAAGAAGCAGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTGCAGAGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 72 bp | TCTTTCCGCCTAAGGAAAGCTTGCACAGCTGCCGACTaGACACCTTTCACTTTTGGGTCTTTCTTTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SFRLRKACTAAD*TPFTFGSFFGG Trigger: GCCTCCAAAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | TTGCTGCCTGGTTGTCTGACACCTGGACTCTTAGATTaGTTGTGTGAGAGAACCGTGGGTCCAGGCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPGCLTPGLLD*LCERTVGPGLE Trigger: TTCCAAGCCTGGACCCACGGTTCTCTCACACAACAAATCTAAGAGTCCAGGTGTCAGACAACCAGGCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | CAGTCAGGGGCCGGTCTTCTGCTTTCTTCACTACCTTaGTCTCCACTGGTTCAAACTGCTTCTTCTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: QSGAGLLLSSLP*SPLVQTASSQL Trigger: TAGCTGAGAAGAAGCAGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGCAGAAGACCGGCCCCTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | CTCCTCTTCTTTCCGCCTAAGGAAAGCTTGCACAGCTaGCGACTGGACACCTTTCACTTTTGGGTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFFPPKESLHS*RLDTFHFWVFL Trigger: AAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CCA 72 bp | GAGAGGGCGCCTTTTTCAACACGGGTGGAGGTAGTTTaGCATCGGGTTCAGGTTTCTTTTTCCTATGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ERAPFSTRVEVV*HRVQVSFSYAF Trigger: GAAAGCATAGGAAAAAGAAACCTGAACCCGATGCCAAACTACCTCCACCCGTGTTGAAAAAGGCGCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 72 bp | TTGTCTAAGCTCCTCTTCTTTCCGCCTAAGGAAAGCTaGCACAGCTGCCGACTGGACACCTTTCACTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSKLLFFPPKES*HSCRLDTFHFW Trigger: CCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAGCTTAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | ACAAAGCTGCTTGTTTCTCACTGGCCGTGCTGGGTCTaGATTTCTTCTCAGCTTGAGGAAAGGGCAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: TKLLVSHWPCWV*ISSQLEERAIL Trigger: AAGGATTGCCCTTTCCTCAAGCTGAGAAGAAATTCAGACCCAGCACGGCCAGTGAGAAACAAGCAGCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS CAA 90 bp | CAAGGCTTTTTGTCTAAGCTCCTCTTCTTTCCGCCTAAGGAAAGCTaGCACAGCTGCCGACTGGACACCTTTCACTTTTGGGTCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QGFLSKLLFFPPKES*HSCRLDTFHFWVFL Trigger: AAGAAAGACCCAAAAGTGAAAGGTGTCCAGTCGGCAGCTGTGCAAGCTTTCCTTAGGCGGAAAGAAGAGGAGCTTAGACAAAAAGCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | GGTAGTTTGGCATCGGGTTCAGGTTTCTTTTTCCTATaGTTTCGTTCAAGAAACTCTCGCTCCCTCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GSLASGSGFFFL*FRSRNSRSLSS Trigger: GGAACTGAGGGAGCGAGAGTTTCTTGAACGAAAGCATAGGAAAAAGAAACCTGAACCCGATGCCAAACTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | TCCTCCTCTTCACGCCTCATTTCCTCTAAGTCCTCTTaGATACCAAGTCTTAAACTCTTGGCTTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSRLISSKSS*IPSLKLLASSF Trigger: GAAGGAGGAAGCCAAGAGTTTAAGACTTGGTATGCAAGAGGACTTAGAGGAAATGAGGCGTGAAGAGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS GCA 72 bp | GCTTTCTTCACTACCTTGATCTCCACTGGTTCAAACTaGTTCTTCTCAGCTAGCCTCAGTAAGTCAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AFFTTLISTGSN*FFSASLSKSVK Trigger: CTTCACTGACTTACTGAGGCTAGCTGAGAAGAAGCAGTTTGAACCAGTGGAGATCAAGGTAGTGAAGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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| CDS TCA 72 bp | TGGATATTTCTTCCTGAGGTTCTCCTTCATCTTCGATaGAATCATCCATTTCCGAGTCATATTCATCATCAT | + |
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Preference number: 6 (lower is better) Translates to: WIFLPEVLLHLR*NHPFPSHIHHH Trigger: ATGATGATGAATATGACTCGGAAATGGATGATTTCATCGAAGATGAAGGAGAACCTCAGGAAGAAATATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061639.10 |
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