Pregenerated sensors for SPTLC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039092Ensembl transcript IDs: ENSMUST00000047370.3, ENSMUST00000110083.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACGGTTTGCTTCAAAGACATCTCTGCTCACCACAGGCCAGCTCTaGATTCTCTCCCAAGCATTAATTGTGTCTTTTGACACCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: GRFASKTSLLTTGQL*ILSQALIVSFDTCP Trigger: AGGACAGGTGTCAAAAGACACAATTAATGCTTGGGAGAGAATGCAGAGCTGGCCTGTGGTGAGCAGAGATGTCTTTGAAGCAAACCGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR TCA 90 bp | AAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATaGACTGTTACTGGTGGAACAAGGGACACAAATCCTTCTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: KPCRLCLSWSFAQYI*TVTGGTRDTNPSLT Trigger: TGTCAGAGAAGGATTTGTGTCCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR CCA 90 bp | TGCATTCTCTCCCAAGCATTAATTGTGTCTTTTGACACCTGTCCTTaGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: CILSQALIVSFDTCP*RKSKCDKQKPCRLC Trigger: GCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGGACAGGTGTCAAAAGACACAATTAATGCTTGGGAGAGAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR GCA 90 bp | AGATATTCCTTAAAGCAACAAAGGCCAAGCATGCTAAGCTCACTCTaGACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: RYSLKQQRPSMLSSL*THQHHLGWFNFIVL Trigger: TAAAACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAGCATGCTTGGCCTTTGTTGCTTTAAGGAATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGCCTTTCCGGAGGGAGGTCTTTCTaGCAGTCTTTATGTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: PWRKSKCDKQKPCRLCLSGGRSF*QSLCSI Trigger: AATGGAACATAAAGACTGCCAGAAAGACCTCCCTCC...GGAAAGGCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCTTGAAAAGACCTGACCCAAAAGCAACTGAAACACAGGGTCACTGCCATAGCCTGTTTGGAAAATaGAATTGTCCTCAGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KPLKRPDPKATETQGHCHSLFGK*NCPQKG Trigger: CCCCTTCTGAGGACAATTTCATTTTCCAAACAGGCT...ATGGCAGTGACCCTGTGTTTCAGTTGCTTTTGGGTCAGGTCTTTTCAAGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR CAA 90 bp | CTTAACAATAAAGTTGTAGCAGGACATCAAGAGGAAAAGGACGGTTaGCTTCAAAGACATCTCTGCTCACCACAGGCCAGCTCTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: LNNKVVAGHQEEKDG*LQRHLCSPQASSAF Trigger: GAATGCAGAGCTGGCCTGTGGTGAGCAGAGATGTCTTTGAAGCAAACCGTCCTTTTCCTCTTGATGTCCTGCTACAACTTTATTGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATATCCAAAACTGGCTTGTaGTTGCTTTTCTCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: MLSSLCTHQHHLGWFNFISKTGL*LLFSLL Trigger: GAGGAGGGAGAAAAGCAATCACAAGCCAGTTTTGGA...TATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGCCTTTCCCCAATTAAGCCTGTTTaGAAAATGAAATTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PWRKSKCDKQKPCRLCLSPIKPV*KMKLSS Trigger: TGAGGACAATTTCATTTTCCAAACAGGCTTAATTGG...GGAAAGGCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGAACCACAGGCCAGCTCTaGATTCTCTCCCAAGCATTA | + |
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Preference number: 2 (lower is better) Translates to: SVIWERVIREFEFHYVLRTTGQL*ILSQAL Trigger: TAATGCTTGGGAGAGAATGCAGAGCTGGCCTGTGGT...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGACGCCTCTGCCTTTCCTaGAGCTTCGCACAATACATA | + |
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Preference number: 2 (lower is better) Translates to: SVIWERVIREFEFHYVLRRLCLS*SFAQYI Trigger: TATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCG...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGAATTAATTGTGTCTTTTaGCACCTGTCCTTGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVIWERVIREFEFHYVLRINCVF*HLSLEK Trigger: TTTCTCCAAGGACAGGTGTCAAAAGACACAATTAAT...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR TCA 72 bp | CGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATaGACTGTTACTGGTGGAACAAGGGACACAAATCCT | + |
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Preference number: 3 (lower is better) Translates to: RLCLSWSFAQYI*TVTGGTRDTNP Trigger: AGGATTTGTGTCCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR CCA 72 bp | CTGGAGCTTCGCACAATACATATGAACTGTTACTGGTaGAACAAGGGACACAAATCCTTCTCTGACACTCTT | + |
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Preference number: 3 (lower is better) Translates to: LELRTIHMNCYW*NKGHKSFSDTL Trigger: AAGAGTGTCAGAGAAGGATTTGTGTCCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR CCA 72 bp | TTCCTGGAGCTTCGCACAATACATATGAACTGTTACTaGTGGAACAAGGGACACAAATCCTTCTCTGACACT | + |
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Preference number: 3 (lower is better) Translates to: FLELRTIHMNCY*WNKGHKSFSDT Trigger: AGTGTCAGAGAAGGATTTGTGTCCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR-3UTR CAA 90 bp | CATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTTTGGAAAATGAAATaGTCCTCAGAAGGGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: HVASAFPGASHNTYELLLVWKMK*SSEGVK Trigger: TTTTACCCCTTCTGAGGACAATTTCATTTTCCAAAC...CAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | CCTTGGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGCCTTTCCCCTGGCCCGACCTTCTaGCAGGGAAGTAGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PWRKSKCDKQKPCRLCLSPGPTF*QGSSWK Trigger: TTTCCAGCTACTTCCCTGCCAGAAGGTCGGGCCAGG...GGAAAGGCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATCGCCCTCTACCACGATaGGAATCTTTTTCCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYRPLPR*ESFSKL Trigger: GAGCTTGGAAAAAGATTCTCATCGTGGTAGAGGGCG...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| 3UTR CAA 72 bp | AAAGTTGTAGCAGGACATCAAGAGGAAAAGGACGGTTaGCTTCAAAGACATCTCTGCTCACCACAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KVVAGHQEEKDG*LQRHLCSPQAS Trigger: GCTGGCCTGTGGTGAGCAGAGATGTCTTTGAAGCAAACCGTCCTTTTCCTCTTGATGTCCTGCTACAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGGACTCCAGCTGTCTCTaGTTCTCATGTAAAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AFPGASHNTYELLLVEQGDSSCL*FSCKGS Trigger: GGAACCTTTACATGAGAATCAGAGACAGCTGGAGTC...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATTCAAGAACTCAGCCATaGGATCCTCCAACTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYSRTQP*DPPTPC Trigger: ACAAGGAGTTGGAGGATCTCATGGCTGAGTTCTTGA...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | AAGCCCTTGAAAAGACCTGACCCAAAAGCAACTGAAACACAGGGTCACTGCCATACACAACCAGTGCTTTaGCTTTTTCCTTGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KPLKRPDPKATETQGHCHTQPVL*LFPCWV Trigger: GACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGT...ATGGCAGTGACCCTGTGTTTCAGTTGCTTTTGGGTCAGGTCTTTTCAAGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCTTGAAAAGACCTGACCCAAAAGCAACTGAAACACAGGGTCACTGCCATGTAGGGCTCAAAGACTaGCTTATCCTCAGCATATGC | + |
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Preference number: 4 (lower is better) Translates to: KPLKRPDPKATETQGHCHVGLKD*LILSIC Trigger: GCATATGCTGAGGATAAGCCAGTCTTTGAGCCCTAC...ATGGCAGTGACCCTGTGTTTCAGTTGCTTTTGGGTCAGGTCTTTTCAAGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGGGCAAGGTTCACAATaGAACCTTCCATGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYGQGSQ*NLPCCR Trigger: TCTACAGCATGGAAGGTTCCATTGTGAACCTTGCCC...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | CCTTGGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGCCTTTTTCCTTGCTaGGTCTTAGGATTGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PWRKSKCDKQKPCRLCLSCLFPC*VLGLCR Trigger: TCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCA...GGAAAGGCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | CATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGTTGCTGGGCTTCCTTTaGGATTCCATTTTTCACACA | + |
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Preference number: 4 (lower is better) Translates to: HVASAFPGASHNTYELLLLLGFL*DSIFHT Trigger: TGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAA...CAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATTACAGGGATATTCATTaGGTTGGTTGCGAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYYRDIH*VGCESH Trigger: ATGGGATTCGCAACCAACGCAATGAATATCCCTGTA...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGGATATTCATTGCGTTaGTTGCGAATCCCATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYGYSLR*LRIPFQ Trigger: TTGGAATGGGATTCGCAACCAACGCAATGAATATCC...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCCTGGCCCGACCTTCTaGCAGGGAAGTAGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYPGPTF*QGSSWK Trigger: TTTCCAGCTACTTCCCTGCCAGAAGGTCGGGCCAGG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCTTGAAAAGACCTGACCCAAAAGCAACTGAAACACAGGGTCACTGCCATACTCATCACTTAAAATaGGGCATCCCTTTCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: KPLKRPDPKATETQGHCHTHHLK*GIPFQQ Trigger: TTGTTGGAAAGGGATGCCTCATTTTAAGTGATGAGT...ATGGCAGTGACCCTGTGTTTCAGTTGCTTTTGGGTCAGGTCTTTTCAAGGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | ACAAACAGAAGCCATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATTCCAACAACCACCACTaGGATCTTTTTCTTAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TNRSHVASAFPGASHNTYSNNHH*DLFLKQ Trigger: TTGCTTAAGAAAAAGATCTCAGTGGTGGTTGTTGGA...ATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATGGCTTCTGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | CATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGTTCTCGCTCTACAGCTaGATTGCATTTTTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: HVASAFPGASHNTYELLLFSLYS*IAFFNS Trigger: GGAATTGAAAAATGCAATGCAGCTGTAGAGCGAGAA...CAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | ATGCTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATACCATTTCATTTCTGGTaGTGGCCACACCTACACCAT | + |
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Preference number: 4 (lower is better) Translates to: MLSSLCTHQHHLGWFNFIPFHFW*WPHLHH Trigger: ATGGTGTAGGTGTGGCCAGCACCAGAAATGAAATGG...TATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | CATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGTCCAAAAGACATCACTaGTTCTACATTCAAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: HVASAFPGASHNTYELLLSKRHH*FYIQEL Trigger: GAGTTCTTGAATGTAGAAGCAGTGATGTCTTTTGGA...CAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCGCCCTCTACCACGATaGGAATCTTTTTCCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYRPLPR*ESFSKL Trigger: GAGCTTGGAAAAAGATTCTCATCGTGGTAGAGGGCG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR TCA 90 bp | CTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTGAGTATAGCACGCCCTaGTTTCTTGAGTGGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: LSSLCTHQHHLGWFNFIVEYSTP*FLEWEI Trigger: TATTTCCCACTCAAGAAATCAGGGCGTGCTATACTC...AACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | CTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTGCCTTCCTATTTTGCTaGGCTTCCTTTGAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSSLCTHQHHLGWFNFIVAFLFC*ASFEIP Trigger: TGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGC...AACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | CATGTCGCCTCTGCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGAGGATGACTGAAGTGTaGTTAAACTCATCACTTAAA | + |
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Preference number: 4 (lower is better) Translates to: HVASAFPGASHNTYELLLRMTEV*LNSSLK Trigger: TTTAAGTGATGAGTTTAACCACACTTCAGTCATCCT...CAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGCAGAGGCGACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTGGCAGGGAAGTAGCTaGAAATCCAACAACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSWQGSS*KSNNHH Trigger: GTGGTGGTTGTTGGATTTCCAGCTACTTCCCTGCCA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGACTCCAGCTGTCTCTaGTTCTCATGTAAAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYDSSCL*FSCKGS Trigger: GGAACCTTTACATGAGAATCAGAGACAGCTGGAGTC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR GCA 90 bp | CTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTCTTTGCCTTTTTCCTTaGTGGGTCTTAGGATTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LSSLCTHQHHLGWFNFIVLCLFP*WVLGLC Trigger: ACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAG...AACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR GCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTACACAACCAGTGCTTTaGCTTTTTCCTTGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSTQPVL*LFPCWV Trigger: GACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGT...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCCATTTCATTTCTGGTaGTGGCCACACCTACACCAT | + |
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Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYPFHFW*WPHLHH Trigger: ATGGTGTAGGTGTGGCCAGCACCAGAAATGAAATGG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTAACGTAGACATAAAGTaGTGCTTCCTGGTAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSNVDIK*CFLVGL Trigger: GAGCCCTACCAGGAAGCACCACTTTATGTCTACGTT...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGATACCCATTTCATTTCTaGTGCTGGCCACACCTACAC | + |
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Preference number: 4 (lower is better) Translates to: SVIWERVIREFEFHYVLRYPFHF*CWPHLH Trigger: GTGTAGGTGTGGCCAGCACCAGAAATGAAATGGGTA...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTACCCATTTCATTTCTaGTGCTGGCCACACCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSYPFHF*CWPHLH Trigger: GTGTAGGTGTGGCCAGCACCAGAAATGAAATGGGTA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGGGCAAGGTTCACAATaGAACCTTCCATGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYGQGSQ*NLPCCR Trigger: TCTACAGCATGGAAGGTTCCATTGTGAACCTTGCCC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGAGTACAGCCAATACTGTaGGCTTCATCAATGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVIWERVIREFEFHYVLRVQPIL*ASSMYR Trigger: CCTGTACATTGATGAAGCTCACAGTATTGGCTGTAC...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGTACAGCCAATACTGTaGGCTTCATCAATGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYVQPIL*ASSMYR Trigger: CCTGTACATTGATGAAGCTCACAGTATTGGCTGTAC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCACGCCCTGATTTCTTaGGTGGGAAATATTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYHALIS*VGNISR Trigger: ACGTGAAATATTTCCCACTCAAGAAATCAGGGCGTG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTCACGCCCTGATTTCTTaGGTGGGAAATATTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSHALIS*VGNISR Trigger: ACGTGAAATATTTCCCACTCAAGAAATCAGGGCGTG...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGAGTATAGCACGCCCTaGTTTCTTGAGTGGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYEYSTP*FLEWEI Trigger: TATTTCCCACTCAAGAAATCAGGGCGTGCTATACTC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGAGTAGACATAAAGTGGTaGTTCCTGGTAGGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVIWERVIREFEFHYVLRVDIKW*FLVGLK Trigger: TTTGAGCCCTACCAGGAAGCACCACTTTATGTCTAC...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR GCA 90 bp | CTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTCATCTCTTCAAAGCTTaGTTCATTGTCAAAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLCTHQHHLGWFNFIVHLFKA*FIVKTL Trigger: GAGGGTTTTGACAATGAAGCAAGCTTTGAAGAGATG...AACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTGCCTTCCTATTTTGCTaGGCTTCCTTTGAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSAFLFC*ASFEIP Trigger: TGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGC...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGATTTCATTTCTGGTGCTaGCCACACCTACACCATACT | + |
|
Preference number: 4 (lower is better) Translates to: SVIWERVIREFEFHYVLRFHFWC*PHLHHT Trigger: AGTATGGTGTAGGTGTGGCCAGCACCAGAAATGAAA...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTTCATTTCTGGTGCTaGCCACACCTACACCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSFHFWC*PHLHHT Trigger: AGTATGGTGTAGGTGTGGCCAGCACCAGAAATGAAA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTGCTGGGCTTCCTTTaGGATTCCATTTTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSLLGFL*DSIFHT Trigger: TGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCTTTGCCTTTTTCCTTaGTGGGTCTTAGGATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYLCLFP*WVLGLC Trigger: ACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATTACAGGGATATTCATTaGGTTGGTTGCGAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYYRDIH*VGCESH Trigger: ATGGGATTCGCAACCAACGCAATGAATATCCCTGTA...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACTGCCATTTGTACGCATGTGTGTATTTATAGCAAAGGAGAGGGAAAAATGTTTTCCTTAAGTTaGTGTATTCTCTCCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTAICTHVCIYSKGEGKMFSLS*CILSIP Trigger: AGGTATGGAGAGAATACAGCAACTTAAGGAAAACAT...TTTTCCCTCTCCTTTGCTATAAATACACACATGCGTACAAATGGCAGTGACCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTGCCTTTTTCCTTGCTaGGTCTTAGGATTGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSCLFPC*VLGLCR Trigger: TCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTGGATATTCATTGCGTTaGTTGCGAATCCCATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSGYSLR*LRIPFQ Trigger: TTGGAATGGGATTCGCAACCAACGCAATGAATATCC...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATACTCATCACTTAAAATaGGGCATCCCTTTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYTHHLK*GIPFQQ Trigger: TTGTTGGAAAGGGATGCCTCATTTTAAGTGATGAGT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR TCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATTCCAACAACCACCACTaGGATCTTTTTCTTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYSNNHH*DLFLKQ Trigger: TTGCTTAAGAAAAAGATCTCAGTGGTGGTTGTTGGA...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTCGCTCTACAGCTaGATTGCATTTTTCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSFSLYS*IAFFNS Trigger: GGAATTGAAAAATGCAATGCAGCTGTAGAGCGAGAA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATATCATCATATTTCCCTaGAAGCCCAAGGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYIIIFP*KPKVVV Trigger: TACAACTACCTTGGGCTTGCAGGGAAATATGATGAT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATCATCTCTTCAAAGCTTaGTTCATTGTCAAAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYHLFKA*FIVKTL Trigger: GAGGGTTTTGACAATGAAGCAAGCTTTGAAGAGATG...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTCCAAAAGACATCACTaGTTCTACATTCAAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSSKRHH*FYIQEL Trigger: GAGTTCTTGAATGTAGAAGCAGTGATGTCTTTTGGA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR GCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATATGTTTTCCTTAAGTTaGTGTATTCTCTCCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYMFSLS*CILSIP Trigger: AGGTATGGAGAGAATACAGCAACTTAAGGAAAACAT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CCA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATAGGATGACTGAAGTGTaGTTAAACTCATCACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NYITFEIKREGGLSGSLYRMTEV*LNSSLK Trigger: TTTAAGTGATGAGTTTAACCACACTTCAGTCATCCT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS TCA 90 bp | GGTTCACAATGGAACCTTCCATGCTGTAGACGCCCTCTACCACGATaGGAATCTTTTTCCAAGCTCTCCCTGTGCCAGGCTGGCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSQWNLPCCRRPLPR*ESFSKLSLCQAGHG Trigger: TCCGTGGCCAGCCTGGCACAGGGAGAGCTTGGAAAAAGATTCTCATCGTGGTAGAGGGCGTCTACAGCATGGAAGGTTCCATTGTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS TCA 90 bp | CCATGTATACGTCAATATCTTCAGGGTCCAGTCCAAATAACTCTCTaGCGCCTCGTCCCGTGGGGCCTGTACAGCCAATACTGTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PCIRQYLQGPVQITL*RLVPWGLYSQYCEL Trigger: AAGCTCACAGTATTGGCTGTACAGGCCCCACGGGACGAGGCGTCAGAGAGTTATTTGGACTGGACCCTGAAGATATTGACGTATACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGCACACAACCAGTGCTTaGCCTTTTTCCTTGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AFPGASHNTYELLLVEQGHTTSA*PFSLLG Trigger: ACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTG...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGGAGAAAGTCCAAATGTGACAAACAGAAGCCATGTCGCCTCTGCCTTTCCCGCTCTACAGCTGCATaGCATTTTTCAATTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWRKSKCDKQKPCRLCLSRSTAA*HFSIPQ Trigger: CTGGGGAATTGAAAAATGCAATGCAGCTGTAGAGCG...GGAAAGGCAGAGGCGACATGGCTTCTGTTTGTCACATTTGGACTTTCTCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS TCA 90 bp | CCTTTTTCCCGCCTATATATCCTCCTGAGCCCGAGAAGCTCTTGGTaGATGTACCCATGTATACGTCAATATCTTCAGGGTCCAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSRLYILLSPRSSW*MYPCIRQYLQGPVQ Trigger: TTGGACTGGACCCTGAAGATATTGACGTATACATGGGTACATTCACCAAGAGCTTCTCGGGCTCAGGAGGATATATAGGCGGGAAAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGAGATCCTCCAACTCCTaGTGTATATCCAAGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: AFPGASHNTYELLLVEQGRSSNS*CISKVP Trigger: GGGTACCTTGGATATACACAAGGAGTTGGAGGATCT...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGGGGATATTCATTGCGTaGGTTGCGAATCCCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AFPGASHNTYELLLVEQGGIFIA*VANPIP Trigger: TGGAATGGGATTCGCAACCAACGCAATGAATATCCC...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS CCA 90 bp | GGCTCAAAGACTGGCTTATCCTCAGCATATGCCTTCCTATTTTGCTaGGCTTCCTTTGAGATTCCATTTTTCACACAACCAGTGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSKTGLSSAYAFLFC*ASFEIPFFTQPVLC Trigger: GCAAAGCACTGGTTGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGCATATGCTGAGGATAAGCCAGTCTTTGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTTGAAAAGACCTGACCCAAAAGCAACTGAAACACAGGGTCACTGCCATTATTCATTGCGTTGGTaGCGAATCCCATTCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPLKRPDPKATETQGHCHYSLRW*RIPFQK Trigger: CTTTTGGAATGGGATTCGCAACCAACGCAATGAATA...ATGGCAGTGACCCTGTGTTTCAGTTGCTTTTGGGTCAGGTCTTTTCAAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS TCA 90 bp | CCGACCTTCTGGCAGGGAAGTAGCTGGAAATCCAACAACCACCACTaGGATCTTTTTCTTAAGCAAAAATCTGCTGAAAGCAGACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PTFWQGSSWKSNNHH*DLFLKQKSAESRHF Trigger: AAAGTGTCTGCTTTCAGCAGATTTTTGCTTAAGAAAAAGATCTCAGTGGTGGTTGTTGGATTTCCAGCTACTTCCCTGCCAGAAGGTCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGTCTGCATTATTGTGTTaGAAGGGTCTTATGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFPGASHNTYELLLVEQGSALLC*KGLMTA Trigger: TGCAGTCATAAGACCCTTCAAACACAATAATGCAGA...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGAGCCCGAGAAGCTCTaGGTGAATGTACCCATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: MLSSLCTHQHHLGWFNFIEPEKL*VNVPMY Trigger: ATACATGGGTACATTCACCAAGAGCTTCTCGGGCTC...TATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS TCA 90 bp | TGCTTCATTGTCAAAACCCTCCTTATTGTAGAGTATAGCACGCCCTaGTTTCTTGAGTGGGAAATATTTCACGTTCAGGAGATCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFIVKTLLIVEYSTP*FLEWEIFHVQEITE Trigger: CTCGGTGATCTCCTGAACGTGAAATATTTCCCACTCAAGAAATCAGGGCGTGCTATACTCTACAATAAGGAGGGTTTTGACAATGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGCTTTGCCTTTTTCCTaGCTGGGTCTTAGGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSSLCTHQHHLGWFNFIALPFS*LGLRIV Trigger: CACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGC...TATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCCTGGAGCTTCGCACAATACATATGAACTGTTACTGGTGGAACAAGGGTATGTTTTCCTTAAGTaGCTGTATTCTCTCCATACC | + |
|
Preference number: 5 (lower is better) Translates to: AFPGASHNTYELLLVEQGYVFLK*LYSLHT Trigger: GGTATGGAGAGAATACAGCAACTTAAGGAAAACATA...CCCTTGTTCCACCAGTAACAGTTCATATGTATTGTGCGAAGCTCCAGGAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
||
| CDS TCA 90 bp | CCATTCCAAAAGACATCACTGCTTCTACATTCAAGAACTCAGCCATaGGATCCTCCAACTCCTTGTGTATATCCAAGGTACCCATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFQKTSLLLHSRTQP*DPPTPCVYPRYPFH Trigger: ATGAAATGGGTACCTTGGATATACACAAGGAGTTGGAGGATCTCATGGCTGAGTTCTTGAATGTAGAAGCAGTGATGTCTTTTGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS GCA 90 bp | TTTGAGATTCCATTTTTCACACAACCAGTGCTTTGCCTTTTTCCTTaGTGGGTCTTAGGATTGTGTAGAGTCCCATTTGTAACAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FEIPFFTQPVLCLFP*WVLGLCRVPFVTAL Trigger: CAGTGCTGTTACAAATGGGACTCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTGAAAAATGGAATCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS CCA 90 bp | CTTATGACTGCACCTGAGAGTCGAGATCCTAGGATGACTGAAGTGTaGTTAAACTCATCACTTAAAATGAGGCATCCCTTTCCAACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LMTAPESRDPRMTEV*LNSSLKMRHPFPTN Trigger: ATTTGTTGGAAAGGGATGCCTCATTTTAAGTGATGAGTTTAACCACACTTCAGTCATCCTAGGATCTCGACTCTCAGGTGCAGTCATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTCACACAACCAGTGCTTaGCCTTTTTCCTTGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSHTTSA*PFSLLG Trigger: ACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTG...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTGAGCCCGAGAAGCTCTaGGTGAATGTACCCATGTAT | + |
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Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSEPEKL*VNVPMY Trigger: ATACATGGGTACATTCACCAAGAGCTTCTCGGGCTC...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTGCTTTGCCTTTTTCCTaGCTGGGTCTTAGGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSALPFS*LGLRIV Trigger: CACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGC...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCTCACTCTGCACGCACCAGCATCATTTGGGTTGGTTTAATTTTATAGTTTTTGCTGGGCTTCCTTaGAGATTCCATTTTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: LSSLCTHQHHLGWFNFIVFAGLP*RFHFSH Trigger: GTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAAA...AACTATAAAATTAAACCAACCCAAATGATGCTGGTGCGTGCAGAGTGAGCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTCGCTCTACAGCTGCATaGCATTTTTCAATTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSRSTAA*HFSIPQ Trigger: CTGGGGAATTGAAAAATGCAATGCAGCTGTAGAGCG...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATAGATCCTCCAACTCCTaGTGTATATCCAAGGTACCC | + |
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Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYRSSNS*CISKVP Trigger: GGGTACCTTGGATATACACAAGGAGTTGGAGGATCT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGGGATATTCATTGCGTaGGTTGCGAATCCCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYGIFIA*VANPIP Trigger: TGGAATGGGATTCGCAACCAACGCAATGAATATCCC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATATACAGGGATATTCATaGCGTTGGTTGCGAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYIQGYS*RWLRIP Trigger: TGGGATTCGCAACCAACGCAATGAATATCCCTGTAT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTATACAGGGATATTCATaGCGTTGGTTGCGAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSIQGYS*RWLRIP Trigger: TGGGATTCGCAACCAACGCAATGAATATCCCTGTAT...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTATTCATTGCGTTGGTaGCGAATCCCATTCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSYSLRW*RIPFQK Trigger: CTTTTGGAATGGGATTCGCAACCAACGCAATGAATA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGTGTAATTTGGGAACGTGTTATAAGGGAATTTGAGTTTCACTATGTGCTCAGAGCATCTCTTCAAAGCTaGCTTCATTGTCAAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVIWERVIREFEFHYVLRASLQS*LHCQNP Trigger: AGGGTTTTGACAATGAAGCAAGCTTTGAAGAGATGC...TCTGAGCACATAGTGAAACTCAAATTCCCTTATAACACGTTCCCAAATTACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047370.3 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATGCATCTCTTCAAAGCTaGCTTCATTGTCAAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYASLQS*LHCQNP Trigger: AGGGTTTTGACAATGAAGCAAGCTTTGAAGAGATGC...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTCTGCATTATTGTGTTaGAAGGGTCTTATGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSSALLC*KGLMTA Trigger: TGCAGTCATAAGACCCTTCAAACACAATAATGCAGA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTCAAAGCTTGCTTCATaGTCAAAACCCTCCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSSKLAS*SKPSLL Trigger: CAATAAGGAGGGTTTTGACAATGAAGCAAGCTTTGA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATTCAAAGCTTGCTTCATaGTCAAAACCCTCCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYSKLAS*SKPSLL Trigger: CAATAAGGAGGGTTTTGACAATGAAGCAAGCTTTGA...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTTCTGGCAGTCTTTATAGGTTTTCTGCATTATaGTGTTTGAAGGGTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: NYITFEIKREGGLSGSLYRFSAL*CLKGLM Trigger: CATAAGACCCTTCAAACACAATAATGCAGAAAACCT...ATAAAGACTGCCAGAAAGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGGTAAAATACAATTATATTACTTTCGAGATAAAGAGGGAGGGAGGTCTTATGTTTTCCTTAAGTaGCTGTATTCTCTCCATACC | + |
|
Preference number: 5 (lower is better) Translates to: RRGKIQLYYFRDKEGGRSYVFLK*LYSLHT Trigger: GGTATGGAGAGAATACAGCAACTTAAGGAAAACATA...AGACCTCCCTCCCTCTTTATCTCGAAAGTAATATAATTGTATTTTACCCCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | ATGTGCAGAGGACATGCTGAACCTGGCCCGACCTTCTaGCAGGGAAGTAGCTGGAAATCCAACAACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: MCRGHAEPGPTF*QGSSWKSNNHH Trigger: GTGGTGGTTGTTGGATTTCCAGCTACTTCCCTGCCAGAAGGTCGGGCCAGGTTCAGCATGTCCTCTGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | TGGAACCTTCCATGCTGTAGACGCCCTCTACCACGATaGGAATCTTTTTCCAAGCTCTCCCTGTGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WNLPCCRRPLPR*ESFSKLSLCQA Trigger: AGCCTGGCACAGGGAGAGCTTGGAAAAAGATTCTCATCGTGGTAGAGGGCGTCTACAGCATGGAAGGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | ATGAGAATCTTTTTCCAAGCTCTCCCTGTGCCAGGCTaGCCACGGATGATAGCTTCTCTCAGGAGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MRIFFQALPVPG*PRMIASLRSFS Trigger: AGAGAAGCTCCTGAGAGAAGCTATCATCCGTGGCCAGCCTGGCACAGGGAGAGCTTGGAAAAAGATTCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CAA 90 bp | TTCACACAACCAGTGCTTTGCCTTTTTCCTTGCTGGGTCTTAGGATaGTGTAGAGTCCCATTTGTAACAGCACTGTCGTTCAGATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FTQPVLCLFPCWVLG*CRVPFVTALSFRLA Trigger: GGCCAATCTGAACGACAGTGCTGTTACAAATGGGACTCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | CTGGGGCACTGCAGACCGTGTGACTCCAGCTGTCTCTaGTTCTCATGTAAAGGTTCCTCTTATAAAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGHCRPCDSSCL*FSCKGSSYKSS Trigger: AGAACTTTTATAAGAGGAACCTTTACATGAGAATCAGAGACAGCTGGAGTCACACGGTCTGCAGTGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | CGCCTATATATCCTCCTGAGCCCGAGAAGCTCTTGGTaGATGTACCCATGTATACGTCAATATCTTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLYILLSPRSSW*MYPCIRQYLQG Trigger: ACCCTGAAGATATTGACGTATACATGGGTACATTCACCAAGAGCTTCTCGGGCTCAGGAGGATATATAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | GACATAAAGTGGTGCTTCCTGGTAGGGCTCAAAGACTaGCTTATCCTCAGCATATGCCTTCCTATTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DIKWCFLVGLKD*LILSICLPILL Trigger: CAGCAAAATAGGAAGGCATATGCTGAGGATAAGCCAGTCTTTGAGCCCTACCAGGAAGCACCACTTTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CAA 90 bp | ATTTCCTTTTTCCCGCCTATATATCCTCCTGAGCCCGAGAAGCTCTaGGTGAATGTACCCATGTATACGTCAATATCTTCAGGGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ISFFPPIYPPEPEKL*VNVPMYTSISSGSS Trigger: ACTGGACCCTGAAGATATTGACGTATACATGGGTACATTCACCAAGAGCTTCTCGGGCTCAGGAGGATATATAGGCGGGAAAAAGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | ATCCACAATTTCCTTTTTCCCGCCTATATATCCTCCTaGGCCCGAGAAGCTCTTGGTGAATGTACCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: IHNFLFPAYISS*AREALGECTHV Trigger: TACATGGGTACATTCACCAAGAGCTTCTCGGGCTCAGGAGGATATATAGGCGGGAAAAAGGAAATTGTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS GCA 72 bp | TGCGTTGGTTGCGAATCCCATTCCAAAAGACATCACTaGTTCTACATTCAAGAACTCAGCCATGAGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVGCESHSKRHH*FYIQELSHEIL Trigger: GAGGATCTCATGGCTGAGTTCTTGAATGTAGAAGCAGTGATGTCTTTTGGAATGGGATTCGCAACCAACGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CAA 72 bp | CCTCAGCATATGCCTTCCTATTTTGCTGGGCTTCCTTaGAGATTCCATTTTTCACACAACCAGTGCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQHMPSYFAGLP*RFHFSHNQCFA Trigger: GGCAAAGCACTGGTTGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGCATATGCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | CTCAGCATATGCCTTCCTATTTTGCTGGGCTTCCTTTaGGATTCCATTTTTCACACAACCAGTGCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSICLPILLGFL*DSIFHTTSALP Trigger: AGGCAAAGCACTGGTTGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGCATATGCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | AAGACATCACTGCTTCTACATTCAAGAACTCAGCCATaGGATCCTCCAACTCCTTGTGTATATCCAAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KTSLLLHSRTQP*DPPTPCVYPRY Trigger: GTACCTTGGATATACACAAGGAGTTGGAGGATCTCATGGCTGAGTTCTTGAATGTAGAAGCAGTGATGTCTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | TGGCAGGGAAGTAGCTGGAAATCCAACAACCACCACTaGGATCTTTTTCTTAAGCAAAAATCTGCTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WQGSSWKSNNHH*DLFLKQKSAES Trigger: GCTTTCAGCAGATTTTTGCTTAAGAAAAAGATCTCAGTGGTGGTTGTTGGATTTCCAGCTACTTCCCTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS TCA 72 bp | GTCAAAACCCTCCTTATTGTAGAGTATAGCACGCCCTaGTTTCTTGAGTGGGAAATATTTCACGTTCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VKTLLIVEYSTP*FLEWEIFHVQE Trigger: CTCCTGAACGTGAAATATTTCCCACTCAAGAAATCAGGGCGTGCTATACTCTACAATAAGGAGGGTTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS GCA 72 bp | CCATTTTTCACACAACCAGTGCTTTGCCTTTTTCCTTaGTGGGTCTTAGGATTGTGTAGAGTCCCATTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PFFTQPVLCLFP*WVLGLCRVPFV Trigger: TACAAATGGGACTCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTGAAAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | ACTGGCTTATCCTCAGCATATGCCTTCCTATTTTGCTaGGCTTCCTTTGAGATTCCATTTTTCACACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: TGLSSAYAFLFC*ASFEIPFFTQP Trigger: TGGTTGTGTGAAAAATGGAATCTCAAAGGAAGCCCAGCAAAATAGGAAGGCATATGCTGAGGATAAGCCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CAA 72 bp | GTTCTCAAAGTCCTGATACAGCGGCACAAAGTCTTTTaGTTCTTCTCGCTCTACAGCTGCATTGCATTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLKVLIQRHKVF*FFSLYSCIAFF Trigger: GAAAAATGCAATGCAGCTGTAGAGCGAGAAGAACAAAAAGACTTTGTGCCGCTGTATCAGGACTTTGAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CAA 72 bp | ACATTCAAGAACTCAGCCATGAGATCCTCCAACTCCTaGTGTATATCCAAGGTACCCATTTCATTTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TFKNSAMRSSNS*CISKVPISFLV Trigger: CACCAGAAATGAAATGGGTACCTTGGATATACACAAGGAGTTGGAGGATCTCATGGCTGAGTTCTTGAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS GCA 72 bp | TCCTTTGAGATTCCATTTTTCACACAACCAGTGCTTTaGCTTTTTCCTTGCTGGGTCTTAGGATTGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFEIPFFTQPVL*LFPCWVLGLCR Trigger: TCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTGAAAAATGGAATCTCAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | TTTTTCACACAACCAGTGCTTTGCCTTTTTCCTTGCTaGGTCTTAGGATTGTGTAGAGTCCCATTTGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: FFTQPVLCLFPC*VLGLCRVPFVT Trigger: TGTTACAAATGGGACTCTACACAATCCTAAGACCCAGCAAGGAAAAAGGCAAAGCACTGGTTGTGTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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| CDS CCA 72 bp | TGTGTATATCCAAGGTACCCATTTCATTTCTGGTGCTaGCCACACCTACACCATACTTTTCTAAAGTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: CVYPRYPFHFWC*PHLHHTFLKYP Trigger: AGGATACTTTAGAAAAGTATGGTGTAGGTGTGGCCAGCACCAGAAATGAAATGGGTACCTTGGATATACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047370.3 ENSMUST00000110083.8 |
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