Pregenerated sensors for SPTLC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021036Ensembl transcript IDs: ENSMUST00000021424.5
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCGGGGCCTGAAGTAGGTCTTGATGGATCCAAGCCTATGAGGTaGCTGCAGCGGGGAATGCCTGTTCCAGAAGCCACAGGCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: EPGPEVGLDGSKPMR*LQRGMPVPEATGKG Trigger: ACCCTTGCCTGTGGCTTCTGGAACAGGCATTCCCCGCTGCAGTCACCTCATAGGCTTGGATCCATCAAGACCTACTTCAGGCCCCGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | CAGGTGCTGGGCAAAATCTTCCTAGCCCAGGAGGAGGAGGAGAATTaGCCTTTGGAAGAGCACTGTTCAGGTGGGTCAGCGTCTACGCGG | + |
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Preference number: 1 (lower is better) Translates to: QVLGKIFLAQEEEEN*PLEEHCSGGSASTR Trigger: CCGCGTAGACGCTGACCCACCTGAACAGTGCTCTTCCAAAGGCCAATTCTCCTCCTCCTCCTGGGCTAGGAAGATTTTGCCCAGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | GTTGTGCATGCAAGGAGCAGGTTGTCTGCCCTACAGCTCCCCATATaGTGCACCAGCACTTGTCAGTGTCCTCTGGAGGCAGAATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: VVHARSRLSALQLPI*CTSTCQCPLEAESR Trigger: TCTGGATTCTGCCTCCAGAGGACACTGACAAGTGCTGGTGCACCATATGGGGAGCTGTAGGGCAGACAACCTGCTCCTTGCATGCACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | TCTGTTCCCTGTGCGCTGGCTAGAAGCCCGAGCACACACTTCACGTaGATAAGGCAGAGGGGAGGAAGGATATGCTTTTCTCCACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SVPCALARSPSTHFT*IRQRGGRICFSPLG Trigger: TCCAAGTGGAGAAAAGCATATCCTTCCTCCCCTCTGCCTTATCCACGTGAAGTGTGTGCTCGGGCTTCTAGCCAGCGCACAGGGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR TCA 90 bp | AGGCAGAATCCAGAATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTaGGGACGCTCTACCCTTCAGCCTACGAGAGGGTTTGAGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: RQNPECQSRLRGRSL*GRSTLQPTRGFESE Trigger: TTCTGACTCAAACCCTCTCGTAGGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATTCTGGATTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | GTGCTGGACTTTGAGTTAACTGGAGTTCCTTGCACACGGAAAGAGTaGAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VLDFELTGVPCTRKE*RGRRKQTLSTSGCC Trigger: ACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTCTTTCCGTGTGCAAGGAACTCCAGTTAACTCAAAGTCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | CCTTGCCCCTCGGGCCAAATCTTCTGCATGATTCTGATTATCTTCTaGTTCCTGACGTGGGCTGTGAAGTGGGTCTTACAAACACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PCPSGQIFCMILIIF*FLTWAVKWVLQTQE Trigger: CTCCTGTGTTTGTAAGACCCACTTCACAGCCCACGTCAGGAACCAGAAGATAATCAGAATCATGCAGAAGATTTGGCCCGAGGGGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTaGCTTCTGAGATATAGGATTAAAGGCATAGGTTACCACACCCAG | + |
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Preference number: 1 (lower is better) Translates to: HYADQADLKLRSACL*LLRYRIKGIGYHTQ Trigger: CTGGGTGTGGTAACCTATGCCTTTAATCCTATATCTCAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | CCCTTAACTAATAAGGGAAGAAACACCAAAGTGCATGGTTGTGCATaGAAGGAGCAGGTTGTCTGCCCTACAGCTCCCCATATGGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: PLTNKGRNTKVHGCA*KEQVVCPTAPHMVH Trigger: GTGCACCATATGGGGAGCTGTAGGGCAGACAACCTGCTCCTTGCATGCACAACCATGCACTTTGGTGTTTCTTCCCTTATTAGTTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | GAGAGCATCAAATCTTGGAGTTACAGACAGTTGTGGGCTACCCCGTaGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: ESIKSWSYRQLWATP*VLRFEPGSSEKEVS Trigger: ACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | GTATGTCTATGTGAGAGCATCAAATCTTGGAGTTACAGACAGTTGTaGGCTACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VCLCESIKSWSYRQL*ATPWVLRFEPGSSE Trigger: TTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAGACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | AGGTTTCACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTaGCTCTGCCTTCTGAGATATAGGATTAAAGGCATAGGTTACCAC | + |
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Preference number: 1 (lower is better) Translates to: RFHYADQADLKLRSA*LCLLRYRIKGIGYH Trigger: GTGGTAACCTATGCCTTTAATCCTATATCTCAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTGAAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | CAGGGTGCTGTTCTTGCAAGCACCTTTCATTCCGTCTCCAATAACTaGTCCCAAAGAACAAAGCTTTACACAAAAGCAGTGACACGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QGAVLASTFHSVSNN*SQRTKLYTKAVTRD Trigger: GTCCCGTGTCACTGCTTTTGTGTAAAGCTTTGTTCTTTGGGAGCAGTTATTGGAGACGGAATGAAAGGTGCTTGCAAGAACAGCACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | TATGTATTTTGCCTACATGTATGTCTATGTGAGAGCATCAAATCTTaGAGTTACAGACAGTTGTGGGCTACCCCGTGGGTGCTGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: YVFCLHVCLCESIKS*SYRQLWATPWVLRF Trigger: AAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAGACATACATGTAGGCAAAATACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR TCA 90 bp | ACAAAAGCAGTGACACGGGACAAGAGCCACAGCATTCTTCAGGGTTaGCTTATTAGAATTCATCACACTGGAAACAGTAACAGTTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: TKAVTRDKSHSILQG*LIRIHHTGNSNSFK Trigger: CTTAAAACTGTTACTGTTTCCAGTGTGATGAATTCTAATAAGTCAACCCTGAAGAATGCTGTGGCTCTTGTCCCGTGTCACTGCTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR TCA 90 bp | AAATTAAAAATCTCACATTCCCAGATGATAAGAACATTACAAGAATaGAAAGGGTTCACGACACAGTACACCTTGCAGACTCCAGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: KLKISHSQMIRTLQE*KGFTTQYTLQTPAY Trigger: GTAGGCTGGAGTCTGCAAGGTGTACTGTGTCGTGAACCCTTTTCATTCTTGTAATGTTCTTATCATCTGGGAATGTGAGATTTTTAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR TCA 90 bp | TTATTTACCTTTAGTTTATGTATTTTGCCTACATGTATGTCTATGTaGGAGCATCAAATCTTGGAGTTACAGACAGTTGTGGGCTACCCC | + |
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Preference number: 1 (lower is better) Translates to: LFTFSLCILPTCMSM*EHQILELQTVVGYP Trigger: GGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAGACATACATGTAGGCAAAATACATAAACTAAAGGTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | GTTACTTTTGCAAGCCCTATTAGGTCTGCATCATTAAATAGTAAGTaGTGTGCAAAATACTTAGTACTCCAGTGGGATTCTAAGATGGAA | + |
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Preference number: 1 (lower is better) Translates to: VTFASPIRSASLNSK*CAKYLVLQWDSKME Trigger: TTCCATCTTAGAATCCCACTGGAGTACTAAGTATTTTGCACAGCACTTACTATTTAATGATGCAGACCTAATAGGGCTTGCAAAAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 90 bp | ATGTTTATCTTGCTTTTTGCAAGATATATTACACACCAGGTAATGTaGCTATATACCTTGCCAGTCATCAGAGACTCAGATATGGATACC | + |
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Preference number: 1 (lower is better) Translates to: MFILLFARYITHQVM*LYTLPVIRDSDMDT Trigger: GGTATCCATATCTGAGTCTCTGATGACTGGCAAGGTATATAGCCACATTACCTGGTGTGTAATATATCTTGCAAAAAGCAAGATAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR GCA 90 bp | TTGTCTAAAGTCAAGAAATCTAAGCCAGATGTTTATCTTGCTTTTTaGAAGATATATTACACACCAGGTAATGTGGCTATATACCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LSKVKKSKPDVYLAF*KIYYTPGNVAIYLA Trigger: GGCAAGGTATATAGCCACATTACCTGGTGTGTAATATATCTTGCAAAAAGCAAGATAAACATCTGGCTTAGATTTCTTGACTTTAGACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 90 bp | CCAGGTGCTGGGCAAAATCTTCCTAGCCCAGGAGGAGGAGGAGAATaGGCCTTTGGAAGAGCACTGTTCAGGTGGGTCAGCGTCTACGCG | + |
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Preference number: 2 (lower is better) Translates to: PGAGQNLPSPGGGGE*AFGRALFRWVSVYA Trigger: CGCGTAGACGCTGACCCACCTGAACAGTGCTCTTCCAAAGGCCAATTCTCCTCCTCCTCCTGGGCTAGGAAGATTTTGCCCAGCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTCAGCAGAAGGCACTTaGTCCCTAGGGAGAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCSAEGT*SLGRGP Trigger: TGGCCCTCTCCCTAGGGAGCAAGTGCCTTCTGCTGA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTGCCTTCTGAGCAGCACAAAGCTCTaGATGAAGTCCCTGACCCCG | + |
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Preference number: 2 (lower is better) Translates to: HYADQADLKLRSACLCLLSSTKL*MKSLTP Trigger: CGGGGTCAGGGACTTCATTCAGAGCTTTGTGCTGCT...CAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCAGTGAAGACTGTGAATaGAGGGTGGAAGGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NVSPGSEADLSEDALPFSSEDCE*RVEGGW Trigger: CCAGCCCCCTTCCACCCTTCATTCACAGTCTTCACT...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCGAGATATTTATTCCCTaGCCTTGCCCCTCGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: MSVQAQRQISLRTLYPSAEIFIP*PCPSGQ Trigger: TTGGCCCGAGGGGCAAGGGCAGGGAATAAATATCTC...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCAAATGCCATTTGGAGTaGAGGTGGCCACCTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: NVSPGSEADLSEDALPFSKCHLE*RWPPSV Trigger: TACTGAAGGTGGCCACCTTCACTCCAAATGGCATTT...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCAAACTGAGATCAGCCTaGCTCTGCCTTCTGAGATAT | + |
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Preference number: 2 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCKLRSA*LCLLRY Trigger: ATATCTCAGAAGGCAGAGGCAGGCTGATCTCAGTTT...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 90 bp | CAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTaGCAAGCACCTTTCATTCCGTCTCCAATAACTGCTCCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: QRAQETDTEHIRVLF*QAPFIPSPITAPKE Trigger: TTCTTTGGGAGCAGTTATTGGAGACGGAATGAAAGGTGCTTGCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCGTCCTCAGAAGGACTTaGTTTGGGATCTTTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCVLRRT*FGIFIS Trigger: ACTGATAAAGATCCCAAACCAAGTCCTTCTGAGGAC...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCAGTGCTTTGGTTGATTaGCTTGACTGGTTAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: MSVQAQRQISLRTLYPSASALVD*LDWLNR Trigger: CCTATTTAACCAGTCAAGTCAATCAACCAAAGCACT...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCACAGAGCTTCACAAATaGCACTGCCTCTCTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVTELHK*HCLSSC Trigger: ACAAGAAGAGAGGCAGTGTCATTTGTGAAGCTCTGT...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCACATGTATGTCTATGTaGGAGCATCAAATCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: MSVQAQRQISLRTLYPSATCMSM*EHQILE Trigger: CTCCAAGATTTGATGCTCTCACATAGACATACATGT...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTACAACTTTAGAACATaGCAAGGGCTAAAAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCYNFRT*QGLKAH Trigger: GTGAGCTTTTAGCCCTTGGCATGTTCTAAAGTTGTA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATTCCCTGACCCCGCGGTaGCAGGAAAACAGGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYSLTPR*QENRLF Trigger: GAATAGCCTGTTTTCCTGTCACCGCGGGGTCAGGGA...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTGCCTTCTGAAAGACAGAGTGCTTTaGTTGATTGACTTGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: HYADQADLKLRSACLCLLKDRVL*LIDLTG Trigger: ACCAGTCAAGTCAATCAACCAAAGCACTCTGTCTTT...CAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTACTTAGTACTCCAGTaGGATTCTAAGATGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCYLVLQ*DSKMEC Trigger: ACATTCCATCTTAGAATCCCACTGGAGTACTAAGTA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCCCACTAATGGTGAAGTaGAACATGAGCAAAAGATTG | + |
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Preference number: 2 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVPLMVK*NMSKRL Trigger: CAATCTTTTGCTCATGTTCCACTTCACCATTAGTGG...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | AACCCCATGTTGGAAGCAGAGAGGCACGAACACGCAGCTGTGTCTTACCTAGAATCGGGCCAAATCTTCTaGATGATTCTGATTATCTTC | + |
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Preference number: 2 (lower is better) Translates to: NPMLEAERHEHAAVSYLESGQIF*MILIIF Trigger: GAAGATAATCAGAATCATGCAGAAGATTTGGCCCGA...TTCTAGGTAAGACACAGCTGCGTGTTCGTGCCTCTCTGCTTCCAACATGGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATCTGAAGTGTGGTTCCTaGAATTGGCTCAGAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYLKCGS*NWLRKA Trigger: GGCCTTTCTGAGCCAATTCCAGGAACCACACTTCAG...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCTTTATTCCCTGCCCTTaGCCCTCGGGCCAAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: ILQLGRFISLEKQVVAGIFIPCP*PSGQIF Trigger: GAAGATTTGGCCCGAGGGGCAAGGGCAGGGAATAAA...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | AACCCCATGTTGGAAGCAGAGAGGCACGAACACGCAGCTGTGTCTTACCTAGAATCAGAGACTCAGATATaGATACCCTTAACTAATAAG | + |
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Preference number: 2 (lower is better) Translates to: NPMLEAERHEHAAVSYLESETQI*IPLTNK Trigger: CTTATTAGTTAAGGGTATCCATATCTGAGTCTCTGA...TTCTAGGTAAGACACAGCTGCGTGTTCGTGCCTCTCTGCTTCCAACATGGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR GCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATTGTGGCTATATACCTTaGCAGTCATCAGAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYCGYIP*QSSETQ Trigger: CTGAGTCTCTGATGACTGGCAAGGTATATAGCCACA...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGTTTCACTATGCAGACGTGGTCACTGAAGTGTaGTTCCTGGAATTGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SYGIFLFSVSLFRFHYADVVTEV*FLELAQ Trigger: CTGAGCCAATTCCAGGAACCACACTTCAGTGACCAC...GTCTGCATAGTGAAACCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATAACAGATCCAGGGCATaGAAACAGAGCTTCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYNRSRA*KQSFTN Trigger: ATTTGTGAAGCTCTGTTTTCATGCCCTGGATCTGTT...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR TCA 90 bp | AGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGTTTCACTATGCAGACCCTGCCTCTGCCTTCTaGGATATAGGATTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SYGIFLFSVSLFRFHYADPASAF*DIGLKA Trigger: TGCCTTTAATCCTATATCTCAGAAGGCAGAGGCAGG...GTCTGCATAGTGAAACCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTATAGGACTTAGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGGAGGAGGAGGAGAATTaGCCTTTGGAAGAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: SFIGLSYGIFLFSVSLFREEEEN*PLEEHC Trigger: ACAGTGCTCTTCCAAAGGCCAATTCTCCTCCTCCTC...CCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACTAAGTCCTATAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCCTTCAGATGTGTCTTTaGTCAAGCAGCACAAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVLQMCL*SSSTKL Trigger: GAGCTTTGTGCTGCTTGACCAAAGACACATCTGAAG...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCACTGTGAATGAAGGGTaGAAGGGGGCTGGTTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVTVNEG*KGAGYF Trigger: AAAATAACCAGCCCCCTTCCACCCTTCATTCACAGT...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR TCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATGATTATAGTCACTTATaGCATAATTGGGCCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYDYSHL*HNWARD Trigger: ATCTCTGGCCCAATTATGTCATAAGTGACTATAATC...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR GCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATGCCCAAAATAAACTTTaGACCAAGAGATACATACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYAQNKL*TKRYIQ Trigger: CTGTATGTATCTCTTGGTGCAAAGTTTATTTTGGGC...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCGAGAGCATCAAATCTTaGAGTTACAGACAGTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVESIKS*SYRQLW Trigger: CCACAACTGTCTGTAACTCCAAGATTTGATGCTCTC...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CAA 90 bp | TCTTGTCCTTGTACTGCAGCTGACAGGTCCTCAGAAGGACTTGGTTaGGGATCTTTATCAGTAATAAGAATCATTTTAAAGAATGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: SCPCTAADRSSEGLG*GSLSVIRIILKNGI Trigger: TATGCCATTCTTTAAAATGATTCTTATTACTGATAAAGATCCCAAACCAAGTCCTTCTGAGGACCTGTCAGCTGCAGTACAAGGACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CAA 90 bp | TTCCCCCTTTGTCTAAAGTCAAGAAATCTAAGCCAGATGTTTATCTaGCTTTTTGCAAGATATATTACACACCAGGTAATGTGGCTATAT | + |
|
Preference number: 2 (lower is better) Translates to: FPLCLKSRNLSQMFI*LFARYITHQVMWLY Trigger: ATATAGCCACATTACCTGGTGTGTAATATATCTTGCAAAAAGCAAGATAAACATCTGGCTTAGATTTCTTGACTTTAGACAAAGGGGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | ACCTCAGACCTGGGCGGAAAGTCAGCAGAAGGCACTTaGTCCCTAGGGAGAGGGCCAGTGAGTCTCTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: TSDLGGKSAEGT*SLGRGPVSLSR Trigger: CCGAGAGAGACTCACTGGCCCTCTCCCTAGGGAGCAAGTGCCTTCTGCTGACTTTCCGCCCAGGTCTGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | GCAAGGAGCAGGTTGTCTGCCCTACAGCTCCCCATATaGTGCACCAGCACTTGTCAGTGTCCTCTGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ARSRLSALQLPI*CTSTCQCPLEA Trigger: TGCCTCCAGAGGACACTGACAAGTGCTGGTGCACCATATGGGGAGCTGTAGGGCAGACAACCTGCTCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCGGAGGAGGAGGAGAATaGGCCTTTGGAAGAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCGGGGE*AFGRAL Trigger: CAGTGCTCTTCCAAAGGCCAATTCTCCTCCTCCTCC...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | AGGAGCAGGTTGTCTGCCCTACAGCTCCCCATATGGTaGACCAGCACTTGTCAGTGTCCTCTGGAGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSRLSALQLPIW*TSTCQCPLEAE Trigger: TTCTGCCTCCAGAGGACACTGACAAGTGCTGGTGCACCATATGGGGAGCTGTAGGGCAGACAACCTGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | CCAGAATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTaGGGACGCTCTACCCTTCAGCCTACGAGAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PECQSRLRGRSL*GRSTLQPTRGF Trigger: AAACCCTCTCGTAGGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | TGTGCGCTGGCTAGAAGCCCGAGCACACACTTCACGTaGATAAGGCAGAGGGGAGGAAGGATATGCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CALARSPSTHFT*IRQRGGRICFS Trigger: AGAAAAGCATATCCTTCCTCCCCTCTGCCTTATCCACGTGAAGTGTGTGCTCGGGCTTCTAGCCAGCGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTTAACTAACCCCATGTaGGAAGCAGAGAGGCACGAA | + |
|
Preference number: 3 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCLTNPM*EAERHE Trigger: TTCGTGCCTCTCTGCTTCCAACATGGGGTTAGTTAA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | GGAGTTACAGACAGTTGTGGGCTACCCCGTGGGTGCTaGGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GVTDSCGLPRGC*DLNPGPLKKKS Trigger: TGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | AGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTaGTGTTCTTGCAAGCACCTTTCATTCCGTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RGRRKQTLSTSG*CSCKHLSFRLQ Trigger: TTGGAGACGGAATGAAAGGTGCTTGCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | TTCCTGGAATTGGCTCAGAAAGGCCACACACTGTCCTaGGAGGAATTATCCCCCTCTAGGGAGCACCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLELAQKGHTLS*EELSPSREHQK Trigger: TTTCTGGTGCTCCCTAGAGGGGGATAATTCCTCCCAGGACAGTGTGTGGCCTTTCTGAGCCAATTCCAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | TGTGAGAGCATCAAATCTTGGAGTTACAGACAGTTGTaGGCTACCCCGTGGGTGCTGAGATTTGAACCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: CESIKSWSYRQL*ATPWVLRFEPG Trigger: CCCGGGTTCAAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCAAAGTACAGTCGGCTTaGGTGGTGATGGCTGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: NVSPGSEADLSEDALPFSKVQSA*VVMADL Trigger: TAAGTCAGCCATCACCACCAAAGCCGACTGTACTTT...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCGGTCCTCAGAAGGACTaGGTTTGGGATCTTTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVGPQKD*VWDLYQ Trigger: CTGATAAAGATCCCAAACCAAGTCCTTCTGAGGACC...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | TTTATTCCCTGCCCTTGCCCCTCGGGCCAAATCTTCTaGATGATTCTGATTATCTTCTGGTTCCTGACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FIPCPCPSGQIF*MILIIFWFLTW Trigger: CCACGTCAGGAACCAGAAGATAATCAGAATCATGCAGAAGATTTGGCCCGAGGGGCAAGGGCAGGGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | TTTGAGTTAACTGGAGTTCCTTGCACACGGAAAGAGTaGAGAGGGCGCAGGAAACAGACACTGAGCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: FELTGVPCTRKE*RGRRKQTLSTS Trigger: TGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTCTTTCCGTGTGCAAGGAACTCCAGTTAACTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCGTCAGCAGAAGGCACTaGCTCCCTAGGGAGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILQLGRFISLEKQVVAGIVSRRH*LPRERA Trigger: GGCCCTCTCCCTAGGGAGCAAGTGCCTTCTGCTGAC...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCAAGATTGACCAACACTaGCCTTTAAGGGTCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: NVSPGSEADLSEDALPFSKIDQH*PLRVKS Trigger: AGATTTGACCCTTAAAGGCAAGTGTTGGTCAATCTT...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | ATGACACTGCCTCTCTTCTTGTCCTTGTACTGCAGCTaGCAGGTCCTCAGAAGGACTTGGTTTGGGATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: MTLPLFLSLYCS*QVLRRTWFGIF Trigger: AAAGATCCCAAACCAAGTCCTTCTGAGGACCTGTCAGCTGCAGTACAAGGACAAGAAGAGAGGCAGTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | TGCCTACATGTATGTCTATGTGAGAGCATCAAATCTTaGAGTTACAGACAGTTGTGGGCTACCCCGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLHVCLCESIKS*SYRQLWATPWV Trigger: CACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAGACATACATGTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | TATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTaGCTCTGCCTTCTGAGATATAGGATTAAAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: YADQADLKLRSA*LCLLRYRIKGI Trigger: TATGCCTTTAATCCTATATCTCAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | CCTTTGTACAGAGAGGGATCATCAAGACTGTGGGCATaGAGGCTAAACAAACAGGAGAGGTTTCTATGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLYREGSSRLWA*RLNKQERFLCP Trigger: AGGACATAGAAACCTCTCCTGTTTGTTTAGCCTGCATGCCCACAGTCTTGATGATCCCTCTCTGTACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | TACAAGAATGAAAAGGGTTCACGACACAGTACACCTTaGAGACTCCAGCCTACAGTAACTTGGTCAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YKNEKGSRHSTP*RLQPTVTWSVG Trigger: TCCCACTGACCAAGTTACTGTAGGCTGGAGTCTGCAAGGTGTACTGTGTCGTGAACCCTTTTCATTCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CCA 72 bp | TCGGGCCAAATCTTCTGCATGATTCTGATTATCTTCTaGTTCCTGACGTGGGCTGTGAAGTGGGTCTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SGQIFCMILIIF*FLTWAVKWVLQ Trigger: TTGTAAGACCCACTTCACAGCCCACGTCAGGAACCAGAAGATAATCAGAATCATGCAGAAGATTTGGCCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCAGTCTTAGGAGGTCCTaGGCCACGGGGAGTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVSLRRS*ATGSHI Trigger: TATGTGACTCCCCGTGGCCAAGGACCTCCTAAGACT...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | GGTTACTATGAAGAGGAGATATTTATTCCCTGCCCTTaGCCCTCGGGCCAAATCTTCTGCATGATTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: GYYEEEIFIPCP*PSGQIFCMILI Trigger: AATCAGAATCATGCAGAAGATTTGGCCCGAGGGGCAAGGGCAGGGAATAAATATCTCCTCTTCATAGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | ACTCCAGCCTACAGTAACTTGGTCAGTGGGAAAACGTaGATCTACAAGATCACTCTAATTCAACTCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TPAYSNLVSGKT*IYKITLIQLSH Trigger: GTGGGAGAGTTGAATTAGAGTGATCTTGTAGATCCACGTTTTCCCACTGACCAAGTTACTGTAGGCTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | GTGACACGGGACAAGAGCCACAGCATTCTTCAGGGTTaGCTTATTAGAATTCATCACACTGGAAACAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VTRDKSHSILQG*LIRIHHTGNSN Trigger: GTTACTGTTTCCAGTGTGATGAATTCTAATAAGTCAACCCTGAAGAATGCTGTGGCTCTTGTCCCGTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | AAACAAGGTTACTATGAAGAGGAGATATTTATTCCCTaGCCTTGCCCCTCGGGCCAAATCTTCTGCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: KQGYYEEEIFIP*PCPSGQIFCMI Trigger: AATCATGCAGAAGATTTGGCCCGAGGGGCAAGGGCAGGGAATAAATATCTCCTCTTCATAGTAACCTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | CGTCTACGCGGAAAACTTATACCACTAATGGTGAAGTaGAACATGAGCAAAAGATTGACCAACACTTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RLRGKLIPLMVK*NMSKRLTNTCL Trigger: AAGGCAAGTGTTGGTCAATCTTTTGCTCATGTTCCACTTCACCATTAGTGGTATAAGTTTTCCGCGTAGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCTCTTCAGATGTGTCTTaGGTCAAGCAGCACAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVSSDVS*VKQHKA Trigger: AGCTTTGTGCTGCTTGACCAAAGACACATCTGAAGA...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | CTTCTGCCTTCTGAGATTACAGGTGTGTACCATACTTaGTCCCACAGCAACCATTTATTTACATTTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPSEITGVYHT*SHSNHLFTFLW Trigger: CCATAGAAATGTAAATAAATGGTTGCTGTGGGATCAAGTATGGTACACACCTGTAATCTCAGAAGGCAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | ATCTCACATTCCCAGATGATAAGAACATTACAAGAATaGAAAGGGTTCACGACACAGTACACCTTGCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: ISHSQMIRTLQE*KGFTTQYTLQT Trigger: AGTCTGCAAGGTGTACTGTGTCGTGAACCCTTTTCATTCTTGTAATGTTCTTATCATCTGGGAATGTGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CCA 72 bp | GGCTATATACCTTGCCAGTCATCAGAGACTCAGATATaGATACCCTTAACTAATAAGGGAAGAAACACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GYIPCQSSETQI*IPLTNKGRNTK Trigger: TTTGGTGTTTCTTCCCTTATTAGTTAAGGGTATCCATATCTGAGTCTCTGATGACTGGCAAGGTATATAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR TCA 72 bp | TTTAGTTTATGTATTTTGCCTACATGTATGTCTATGTaGGAGCATCAAATCTTGGAGTTACAGACAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLCILPTCMSM*EHQILELQTVV Trigger: CACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAGACATACATGTAGGCAAAATACATAAACTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR GCA 72 bp | GTCAAGAAATCTAAGCCAGATGTTTATCTTGCTTTTTaGAAGATATATTACACACCAGGTAATGTGGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: VKKSKPDVYLAF*KIYYTPGNVAI Trigger: TATAGCCACATTACCTGGTGTGTAATATATCTTGCAAAAAGCAAGATAAACATCTGGCTTAGATTTCTTGAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR GCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCGGCCAAGAGCCCCAATaGTGTGAGCCTCATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCGQEPQ*CEPHPD Trigger: ATCTGGATGAGGCTCACAGCATTGGGGCTCTTGGCC...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCCATAGCCCACATATGTaGGCACAGCAACCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCHSPHM*AQQPAW Trigger: CCATGCTGGTTGCTGTGCTCACATATGTGGGCTATG...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| 3UTR CAA 72 bp | ATCTTCCTAGCCCAGGAGGAGGAGGAGAATTGGCCTTaGGAAGAGCACTGTTCAGGTGGGTCAGCGTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: IFLAQEEEENWP*EEHCSGGSAST Trigger: CGTAGACGCTGACCCACCTGAACAGTGCTCTTCCAAAGGCCAATTCTCCTCCTCCTCCTGGGCTAGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR TCA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTGCCTTCTGCTGCTCCATACTCCTTaGGGACTTCAGCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HYADQADLKLRSACLCLLLLHTP*GLQQLL Trigger: AAGCAGCTGCTGAAGTCCTCAAGGAGTATGGAGCAG...CAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR GCA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCAGACTGGTGCCATCCTaGCCCATGATGCACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NVSPGSEADLSEDALPFSRLVPS*PMMHFM Trigger: CATGAAGTGCATCATGGGGCAGGATGGCACCAGTCT...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCCGAGAGTACTTTAGCTaGAGCAGATCCCCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSVQAQRQISLRTLYPSAREYFS*SRSPTS Trigger: TGAAGTTGGGGATCTGCTGCAGCTAAAGTACTCTCG...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR CCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCAGAACCAGTGACGCATaGTTCAGCTCATCACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSVQAQRQISLRTLYPSARTSDA*FSSSLR Trigger: TCTGAGTGATGAGCTGAACCATGCGTCACTGGTTCT...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCGCTGTATACATTCTTTaGCAAGACTGGTGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NVSPGSEADLSEDALPFSAVYIL*QDWCHP Trigger: AGGATGGCACCAGTCTTGGCAAAGAATGTATACAGC...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTGTCAAGTATTTCTTTaGTATGAGCTGCTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCCQVFL*YELLTG Trigger: GCCTGTCAGCAGCTCATACCAAAGAAATACTTGACA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | CTATGTGAGAGCATCAAATCTTGGAGTTACAGACAGTaGTGGGCTACCCCGTGGGTGCTGAGATTTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LCESIKSWSYRQ*WATPWVLRFEP Trigger: GGGTTCAAATCTCAGCACCCACGGGGTAGCCCACAACTGTCTGTAACTCCAAGATTTGATGCTCTCACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | AAGCCTACTGCTCTCCTTTTCTTAACTAACCCCATGTaGGAAGCAGAGAGGCACGAACACGCAGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPTALLFLTNPM*EAERHEHAAVS Trigger: AGACACAGCTGCGTGTTCGTGCCTCTCTGCTTCCAACATGGGGTTAGTTAAGAAAAGGAGAGCAGTAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCTCACTTCCCCGTTCTTaGCGCAGCCGTTCGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGISLPRS*RSRSPA Trigger: TGCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGA...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCCCCTGTGTACTTGAATaGCCAGTTATAGTCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVPCVLE*PVIVMR Trigger: TCTCATGACTATAACTGGTCATTCAAGTACACAGGG...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTGCCTTCTGGCATATTGTTGTGTTTaGAGATTCGAATGGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYADQADLKLRSACLCLLAYCCV*RFEWLL Trigger: GAGCAACCATTCGAATCTTCAAACACAACAATATGC...CAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | CAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTaGCAAGCACCTTTCATTCCGTCTCCAATAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QETDTEHIRVLF*QAPFIPSPITA Trigger: AGCAGTTATTGGAGACGGAATGAAAGGTGCTTGCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | AGCTTTATAGGACTTAGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGTACCACGCCTCGCCCTaGAGGGCCAAGAGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFIGLSYGIFLFSVSLFRYHASP*RAKSPN Trigger: ATTGGGGCTCTTGGCCCTTCAGGGCGAGGCGTGGTA...CCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACTAAGTCCTATAAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | ATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCCGCTGACCATAAACAATaGCATCTTTTAAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSVQAQRQISLRTLYPSAADHKQ*HLLKAS Trigger: AGAAGCTTTTAAAAGATGCCATTGTTTATGGTCAGC...GGCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATGATATCCAAAGAGGGTaGGTACGCCATAGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYDIQRG*VRHSPH Trigger: ATGTGGGCTATGGCGTACTCACCCTCTTTGGATATC...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | AGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGTTTCACTATGCAGACTCAGCAGCTGCTTCCTaGCATGATCCAGTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYGIFLFSVSLFRFHYADSAAAS*HDPVFL Trigger: GAGGAACACTGGATCATGTCAGGAAGCAGCTGCTGA...GTCTGCATAGTGAAACCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | AACCCCATGTTGGAAGCAGAGAGGCACGAACACGCAGCTGTGTCTTACCTAGAAATCCAGATACAAGTATaGCTTGTATTTCTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPMLEAERHEHAAVSYLEIQIQV*LVFLLE Trigger: CTCAAGAAGAAATACAAGGCATACTTGTATCTGGAT...TTCTAGGTAAGACACAGCTGCGTGTTCGTGCCTCTCTGCTTCCAACATGGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATCACTGTGAGAATGTGTaGGCAGGTAGTCTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYHCENV*AGSLSA Trigger: AGCTGATAGACTACCTGCGCACACATTCTCACAGTG...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCTTGCTCCTGACAGTCTaGCTCCTAGAACCAGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVLLLTV*LLEPVT Trigger: CGTCACTGGTTCTAGGAGCCAGACTGTCAGGAGCAA...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | AGCTTTATAGGACTTAGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGCCTTCAGGCGTCTCCTaGAATACCTGGTGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFIGLSYGIFLFSVSLFRPSGVS*NTWCSQ Trigger: CTGAGAACACCAGGTATTTCAGGAGACGCCTGAAGG...CCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACTAAGTCCTATAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATGCACAGCAACCAGCATaGGTGTTTCTTCAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYAQQPA*VFLQKL Trigger: AAGCTTTTGAAGAAACACCCATGCTGGTTGCTGTGC...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCCAAAGGCGCCAATTTTaGCCGGCATGTAGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGIQRRQF*PACRAS Trigger: TGATGCTCTACATGCCGGCCAAAATTGGCGCCTTTG...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | GAGGAAGGATATGCTTTTCTCCACTTGGAAGGTGTTTaGATTAACCAGCTTAATGGATTAAGATGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEGYAFLHLEGV*INQLNGLRCLL Trigger: CAGCAGGCATCTTAATCCATTAAGCTGGTTAATCAAAACACCTTCCAAGTGGAGAAAAGCATATCCTTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCGAATCAGGCAACCTTTaGCAACAAGAGCAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVESGNL*QQEQEC Trigger: ACATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTC...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | GGATTAAGATGCCTGCTGGGTACTGAGTATACTAGTAAGCAGGTAAGAGGTTATTTCTTCTCTTTCTGTTaGATGGTGGCACTTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLRCLLGTEYTSKQVRGYFFSFC*MVALFN Trigger: ATTGAAAAGTGCCACCATGCAACAGAAAGAGAAGAA...ATAACCTCTTACCTGCTTACTAGTATACTCAGTACCCAGCAGGCATCTTAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | AACAAAACTTTAAAATGGTGCTCTTCAGATGTGTCTTaGGTCAAGCAGCACAAAGCTCTGAATGAAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTLKWCSSDVS*VKQHKALNEVP Trigger: AGGGACTTCATTCAGAGCTTTGTGCTGCTTGACCAAAGACACATCTGAAGAGCACCATTTTAAAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCAGTATTTCTTTGGTATaGGCTGCTGACAGGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGISISLV*AADRQN Trigger: ATTTTGCCTGTCAGCAGCTCATACCAAAGAAATACT...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCTCTCTTTCTGTTGCATaGTGGCACTTTTCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGISLSVA*WHFSIL Trigger: GAGAATTGAAAAGTGCCACCATGCAACAGAAAGAGA...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| 3UTR CAA 72 bp | TGTACTGCAGCTGACAGGTCCTCAGAAGGACTTGGTTaGGGATCTTTATCAGTAATAAGAATCATTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTAADRSSEGLG*GSLSVIRIILK Trigger: CTTTAAAATGATTCTTATTACTGATAAAGATCCCAAACCAAGTCCTTCTGAGGACCTGTCAGCTGCAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCAAGTTTTCAAAATCCTaGTACAAGGACACAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVKFSKS*YKDTKS Trigger: GGACTTTGTGTCCTTGTATCAGGATTTTGAAAACTT...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR TCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCAGCAGGAATGTTCATTaGATTTGTTGCAAATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGISRNVH*ICCKSH Trigger: ATGGGATTTGCAACAAATTCAATGAACATTCCTGCT...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR GCA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCAGCTTCTCTAAGCTTTaGATATTGTTGTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILQLGRFISLEKQVVAGISFSKL*ILLCLK Trigger: CTTCAAACACAACAATATGCAAAGCTTAGAGAAGCT...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 90 bp | TGGCGGTGCTGCTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCTTaGCGCAGCCGTTCGCCCGCATCGGGCGGCGGCAGCAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRCCSSSTRSSLPRS*RSRSPASGGGSSSL Trigger: GAGGCTGCTGCTGCCGCCGCCCGATGCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS CCA 90 bp | CTCCATTTTCTGTTACATGATGAATCTGGCCGGCAGCCGCGACGGTaGCGGTGCTGCTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHFLLHDESGRQPRR*RCCSSSTRSSLPRS Trigger: AGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCACCGTCGCGGCTGCCGGCCAGATTCATCATGTAACAGAAAATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 90 bp | CAGGCGGTGACATCGACGTGGCATACACAGCACTGTGAGAATGTGTaGGCAGGTAGTCTATCAGCTCCTTCTTGCCTCCGATGTATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QAVTSTWHTQHCENV*AGSLSAPSCLRCIL Trigger: GAGGATACATCGGAGGCAAGAAGGAGCTGATAGACTACCTGCGCACACATTCTCACAGTGCTGTGTATGCCACGTCGATGTCACCGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCTCTTCCAGGGTCTTCTaGTCCGAGGCTGACCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCSSRVF*SEADHK Trigger: TTTATGGTCAGCCTCGGACAAGAAGACCCTGGAAGA...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCTCCATGATATCCACCTaGGCTCCAGGCACACTACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVSMIST*APGTLQ Trigger: CTGTAGTGTGCCTGGAGCCAAGGTGGATATCATGGA...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 90 bp | CATGATGCACTTCATGGAGGTGATAATCTGTTCCATCACAGGCGGTaGCATCGACGTGGCATACACAGCACTGTGAGAATGTGTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HDALHGGDNLFHHRR*HRRGIHSTVRMCAQ Trigger: CTGCGCACACATTCTCACAGTGCTGTGTATGCCACGTCGATGTCACCGCCTGTGATGGAACAGATTATCACCTCCATGAAGTGCATCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 90 bp | CCCTGCTCCATACTCCTTGAGGACTTCAGCAGCTGCTTCCTGACATaGTCCAGTGTTCCTCGCAAATCCAAGATAGTTGTAGGAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PCSILLEDFSSCFLT*SSVPRKSKIVVGTH Trigger: ATGGGTTCCTACAACTATCTTGGATTTGCGAGGAACACTGGATCATGTCAGGAAGCAGCTGCTGAAGTCCTCAAGGAGTATGGAGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | CTGACATTAAGTCATAGCAATAGTCCACTCTCTTTTTGTTCCTTCTGTAGAGTCCTCACTTCCCCGTTCTaGACGCAGCCGTTCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTLSHSNSPLSFCSFCRVLTSPF*TQPFAR Trigger: GCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGAG...GACTCTACAGAAGGAACAAAAAGAGAGTGGACTATTGCTATGACTTAATGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | CACTATGCAGACCAGGCTGACCTCAAACTGAGATCAGCCTGCCTCTGCCTTCTGCCACACCTAAGAACCTaGCTACCAATTTCTCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HYADQADLKLRSACLCLLPHLRT*LPISLV Trigger: AACTAGAGAAATTGGTAGCAAGGTTCTTAGGTGTGG...CAGAAGGCAGAGGCAGGCTGATCTCAGTTTGAGGTCAGCCTGGTCTGCATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGAGGGCGCAGGAAACAGACACTGAGCACATCAGGGTGCTGTTCTTGCGAATGTTCATTGAATTaGTTGCAAATCCCATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ECRGRRKQTLSTSGCCSCECSLN*LQIPCH Trigger: ATGGCATGGGATTTGCAACAAATTCAATGAACATTC...GCAAGAACAGCACCCTGATGTGCTCAGTGTCTGTTTCCTGCGCCCTCTGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 90 bp | TCAGCCAACTGCTGTATACATTCTTTGCCAAGACTGGTGCCATCCTaGCCCATGATGCACTTCATGGAGGTGATAATCTGTTCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SANCCIHSLPRLVPS*PMMHFMEVIICSIT Trigger: TGTGATGGAACAGATTATCACCTCCATGAAGTGCATCATGGGGCAGGATGGCACCAGTCTTGGCAAAGAATGTATACAGCAGTTGGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | AACCCCATGTTGGAAGCAGAGAGGCACGAACACGCAGCTGTGTCTTACCTAGAAGGACACAAAGTCCTTTaGTTCTTCTCTTTCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NPMLEAERHEHAAVSYLEGHKVL*FFSFCC Trigger: GCAACAGAAAGAGAAGAACAAAAGGACTTTGTGTCC...TTCTAGGTAAGACACAGCTGCGTGTTCGTGCCTCTCTGCTTCCAACATGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR CAA 90 bp | ACCCCGTGGGTGCTGAGATTTGAACCCGGGTCCTCTGAAAAAGAAGTCAGTGTCTGTTCATTGAATTTGTaGCAAATCCCATGCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPWVLRFEPGSSEKEVSVCSLNL*QIPCHR Trigger: CCTATGGCATGGGATTTGCAACAAATTCAATGAACA...GACACTGACTTCTTTTTCAGAGGACCCGGGTTCAAATCTCAGCACCCACGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | AATGTCAGTCCAGGCTCAGAGGCAGATCTCTCTGAGGACGCTCTACCCTTCAGCTGCATATTGTTGTGTTaGAAGATTCGAATGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NVSPGSEADLSEDALPFSCILLC*KIRMVA Trigger: AGCAACCATTCGAATCTTCAAACACAACAATATGCA...GCTGAAGGGTAGAGCGTCCTCAGAGAGATCTGCCTCTGAGCCTGGACTGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS TCA 90 bp | ACTCAGAATCAGGCAACCTTTGCCAACAAGAGCAGGAATGTTCATTaGATTTGTTGCAAATCCCATGCCATAGGTCATAGCAGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQNQATFANKSRNVH*ICCKSHAIGHSSFH Trigger: GTGGAAGCTGCTATGACCTATGGCATGGGATTTGCAACAAATTCAATGAACATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTTATAGGACTTAGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGCCTGCTCCATACTCCTaGAGGACTTCAGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFIGLSYGIFLFSVSLFRPAPYS*RTSAAA Trigger: AGCAGCTGCTGAAGTCCTCAAGGAGTATGGAGCAGG...CCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACTAAGTCCTATAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | AGCTTTATAGGACTTAGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGAGAATCAGGCAACCTTaGCCAACAAGAGCAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFIGLSYGIFLFSVSLFRRIRQP*PTRAGM Trigger: CATTCCTGCTCTTGTTGGCAAAGGTTGCCTGATTCT...CCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACTAAGTCCTATAAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
||
| CDS-3UTR CAA 90 bp | AGTTATGGAATCTTTTTATTCTCTGTCTCCCTCTTCAGGTTTCACTATGCAGACTCTAGTTCTTCATGCTaGTCCAGGTTTCCAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SYGIFLFSVSLFRFHYADSSSSC*SRFPIS Trigger: GGAAATTGGAAACCTGGACAAGCATGAAGAACTAGA...GTCTGCATAGTGAAACCTGAAGAGGGAGACAGAGAATAAAAAGATTCCATAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS-3UTR CAA 90 bp | ATACTGCAATTAGGTAGATTCATCAGTTTGGAAAAACAGGTGGTAGCAGGTATCTCATTAAACGGTCTTTaGTACAGTCCTCCATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ILQLGRFISLEKQVVAGISLNGL*YSPPFS Trigger: AGAAAATGGAGGACTGTACAAAAGACCGTTTAATGA...GATACCTGCTACCACCTGTTTTTCCAAACTGATGAATCTACCTAATTGCAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS CAA 90 bp | GTGGCGGTGCTGCTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCTaGACGCAGCCGTTCGCCCGCATCGGGCGGCGGCAGCAGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VAVLLLKYPFLTSPF*TQPFARIGRRQQQP Trigger: AGGCTGCTGCTGCCGCCGCCCGATGCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 72 bp | TGCTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCTTaGCGCAGCCGTTCGCCCGCATCGGGCGGCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CSSSTRSSLPRS*RSRSPASGGGS Trigger: GCTGCCGCCGCCCGATGCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS CAA 72 bp | CTGCTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCTaGACGCAGCCGTTCGCCCGCATCGGGCGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLKYPFLTSPF*TQPFARIGRRQ Trigger: CTGCCGCCGCCCGATGCGGGCGAACGGCTGCGTCAAGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 72 bp | GATGAATCTGGCCGGCAGCCGCGACGGTGGCGGTGCTaGTCCTCAAGTACCCGTTCCTCACTTCCCCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: DESGRQPRRWRC*SSSTRSSLPRS Trigger: AGAACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCACCGTCGCGGCTGCCGGCCAGATTCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 72 bp | CATGATGAATCTGGCCGGCAGCCGCGACGGTGGCGGTaGTGCTCCTCAAGTACCCGTTCCTCACTTCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: HDESGRQPRRWR*CSSSTRSSLPR Trigger: ACGGGGAAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCACCGTCGCGGCTGCCGGCCAGATTCATCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS CCA 72 bp | CTGTTACATGATGAATCTGGCCGGCAGCCGCGACGGTaGCGGTGCTGCTCCTCAAGTACCCGTTCCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: LLHDESGRQPRR*RCCSSSTRSSL Trigger: AAGTGAGGAACGGGTACTTGAGGAGCAGCACCGCCACCGTCGCGGCTGCCGGCCAGATTCATCATGTAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 72 bp | AGGATCCAGGCCAAAGTAATCTACCACGCCTCGCCCTaGAGGGCCAAGAGCCCCAATGCTGTGAGCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: RIQAKVIYHASP*RAKSPNAVSLI Trigger: GATGAGGCTCACAGCATTGGGGCTCTTGGCCCTTCAGGGCGAGGCGTGGTAGATTACTTTGGCCTGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 72 bp | CAGGTTTCCAATTTCCTGACGAGTGCTGCACACCCCTaGTCCATACTCCTTGAGGACTTCAGCAGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QVSNFLTSAAHP*SILLEDFSSCF Trigger: GAAGCAGCTGCTGAAGTCCTCAAGGAGTATGGAGCAGGGGTGTGCAGCACTCGTCAGGAAATTGGAAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 72 bp | AGTAGAGGCACCAGCCGGTGGCGAGAGTACTTTAGCTaGAGCAGATCCCCAACTTCATCTATCTCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SRGTSRWREYFS*SRSPTSSISFK Trigger: TTTGAAGGAGATAGATGAAGTTGGGGATCTGCTGCAGCTAAAGTACTCTCGCCACCGGCTGGTGCCTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 72 bp | GTCTATCAGCTCCTTCTTGCCTCCGATGTATCCTCCTaGAGCACCGAAGCTCTTTGTGAATGTTCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: VYQLLLASDVSS*STEALCECSHH Trigger: ATGATGGGAACATTCACAAAGAGCTTCGGTGCTTCAGGAGGATACATCGGAGGCAAGAAGGAGCTGATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS GCA 72 bp | TGCTGTATACATTCTTTGCCAAGACTGGTGCCATCCTaGCCCATGATGCACTTCATGGAGGTGATAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: CCIHSLPRLVPS*PMMHFMEVIIC Trigger: ACAGATTATCACCTCCATGAAGTGCATCATGGGGCAGGATGGCACCAGTCTTGGCAAAGAATGTATACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 72 bp | ATACTCCTTGAGGACTTCAGCAGCTGCTTCCTGACATaGTCCAGTGTTCCTCGCAAATCCAAGATAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ILLEDFSSCFLT*SSVPRKSKIVV Trigger: TACAACTATCTTGGATTTGCGAGGAACACTGGATCATGTCAGGAAGCAGCTGCTGAAGTCCTCAAGGAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS CCA 72 bp | TCCAGGGTCTTCTTGTCCGAGGCTGACCATAAACAATaGCATCTTTTAAAAGCTTCTCTAAGCTTTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: SRVFLSEADHKQ*HLLKASLSFAY Trigger: ATATGCAAAGCTTAGAGAAGCTTTTAAAAGATGCCATTGTTTATGGTCAGCCTCGGACAAGAAGACCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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| CDS TCA 72 bp | TTAAAAGCTTCTCTAAGCTTTGCATATTGTTGTGTTTaGAGATTCGAATGGTTGCTCCTGACAGTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LKASLSFAYCCV*RFEWLLLTVWL Trigger: GAGCCAGACTGTCAGGAGCAACCATTCGAATCTTCAAACACAACAATATGCAAAGCTTAGAGAAGCTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021424.5 |
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