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Pregenerated sensors for SPTBN5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074899

Ensembl transcript IDs: ENSMUST00000156159.4

Found 847 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTaGAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGAGTGACAGC +
Preference number: 1 (lower is better)
Translates to: SATTRIGCGRPCTRP*SGGESANSLGRSDS
Trigger: GCTGTCACTCCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 90 bp TGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGAGTGACAGCTaGGCTACCCTGGCTGGGCTCCTGCCTGGGTCACTCTTGGTCTTT +
Preference number: 1 (lower is better)
Translates to: CSGGESANSLGRSDS*ATLAGLLPGSLLVF
Trigger: AAAGACCAAGAGTGACCCAGGCAGGAGCCCAGCCAGGGTAGCTCAGCTGTCACTCCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATaGACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGC +
Preference number: 1 (lower is better)
Translates to: RITTSATTRIGCGRP*TRPCSGGESANSLG
Trigger: GCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 90 bp TGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTaGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGC +
Preference number: 1 (lower is better)
Translates to: CVLHTGPEQPWGGYL*VSSRVVPRCVSTGS
Trigger: GCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTGCAGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 90 bp TCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTaGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGT +
Preference number: 1 (lower is better)
Translates to: SSDRSCVLHTGPEQP*GGYLWVSSRVVPRC
Trigger: ACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 90 bp TACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATaGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGAT +
Preference number: 1 (lower is better)
Translates to: YFHSESRSLPKRPRA*TFRSCHRLPSLPRD
Trigger: ATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 90 bp GTTCAAGACCAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTaGTGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCAC +
Preference number: 1 (lower is better)
Translates to: VQDQHHQLLQRLWKL*CPGTAPQRCVWDFH
Trigger: GTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTGGTCTTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 90 bp ACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTaGAAGCTGCAAGCAGAGGTGCTATGGCCATCATCCATGGATGGA +
Preference number: 1 (lower is better)
Translates to: TSDTNMSAALSQSLG*KLQAEVLWPSSMDG
Trigger: TCCATCCATGGATGATGGCCATAGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR GCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGGGTCCTGTCACAGGTTaGCATCTTTGCCCAGAGATC +
Preference number: 2 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRGPVTG*HLCPEI
Trigger: GATCTCTGGGCAAAGATGGCAACCTGTGACAGGACC...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR GCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGACAGGAGCTGTGTTCTaGACACTGGTCCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RPCTRPCSGGESANSLGRTGAVF*TLVLSS
Trigger: GCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGT...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR TCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTCTGCACACTGGTCCTaGGCAGCCCTGGGGAGGGTA +
Preference number: 2 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGSAHWS*AALGRV
Trigger: TACCCTCCCCAGGGCTGCTCAGGACCAGTGTGCAGA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTGGGTCAGTAGTCGAGTaGTTCCCAGGTGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: HVSSPVTESRLEAASRGAGSVVE*FPGVSP
Trigger: TGGAGACACACCTGGGAACCACTCGACTACTGACCC...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR GCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACAGCTGCAAGCAGAGGTaGTATGGCCATCATCCATGG +
Preference number: 2 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHSCKQR*YGHHPW
Trigger: CCATGGATGATGGCCATAGCACCTCTGCTTGCAGCT...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR GCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCACTTGCGACATCAGTTaGTTGTCCTCTGACAGGAGC +
Preference number: 2 (lower is better)
Translates to: PSLPRDLAMKPWFISGIATCDIS*LSSDRS
Trigger: GCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGT...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR-3UTR TCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGTTACTTCCACTCTaGAAGCAGGTCCCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQLLLPL*KQVPSQ
Trigger: TTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAG...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 72 bp CAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGAGTaGCAGCTGAGCTACCCTGGCTGGGCTCCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: QRRRKRKQFRPE*QLSYPGWAPAW
Trigger: CCAGGCAGGAGCCCAGCCAGGGTAGCTCAGCTGTCACTCCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 72 bp ACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATaGACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAAC +
Preference number: 3 (lower is better)
Translates to: TSATTRIGCGRP*TRPCSGGESAN
Trigger: GTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 72 bp GGAGAAAGCGCAAACAGTTTAGGCCGGAGTGACAGCTaGGCTACCCTGGCTGGGCTCCTGCCTGGGTCACTC +
Preference number: 3 (lower is better)
Translates to: GESANSLGRSDS*ATLAGLLPGSL
Trigger: GAGTGACCCAGGCAGGAGCCCAGCCAGGGTAGCTCAGCTGTCACTCCGGCCTAAACTGTTTGCGCTTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 72 bp GCCGGAGTGACAGCTGAGCTACCCTGGCTGGGCTCCTaGCTGGGTCACTCTTGGTCTTTAACTCCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: AGVTAELPWLGS*LGHSWSLTPFP
Trigger: GGGGAAAGGAGTTAAAGACCAAGAGTGACCCAGGCAGGAGCCCAGCCAGGGTAGCTCAGCTGTCACTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTaGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: HTGPEQPWGGYL*VSSRVVPRCVS
Trigger: GGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 72 bp ACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTaGACACTGGTCCTGAGCAGCCCTGGGGAGGGTACC +
Preference number: 3 (lower is better)
Translates to: TSVACPLTGAVF*TLVLSSPGEGT
Trigger: GGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp AGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTaGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTT +
Preference number: 3 (lower is better)
Translates to: RSCVLHTGPEQP*GGYLWVSSRVV
Trigger: AACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 72 bp GTGGACAAGCTGTTACGGCTGACGCATTACAACATCTaGAACAACCAGGATCGGCTGCGGGAGGCCATGCAC +
Preference number: 3 (lower is better)
Translates to: VDKLLRLTHYNI*NNQDRLREAMH
Trigger: GTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp TCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATaGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTG +
Preference number: 3 (lower is better)
Translates to: SESRSLPKRPRA*TFRSCHRLPSL
Trigger: CAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 72 bp CAGCATCACCAACTGCTCCAGAGACTCTGGAAACTCTaGTGTCCAGGCACAGCTCCACAAAGGTGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: QHHQLLQRLWKL*CPGTAPQRCVW
Trigger: CCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTTGGTGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp ACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTaGAAGCTGCAAGCAGAGGTGCTATGGCCATCATCC +
Preference number: 3 (lower is better)
Translates to: TNMSAALSQSLG*KLQAEVLWPSS
Trigger: GGATGATGGCCATAGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR TCA 72 bp AAGAGTATCTGCTGTACCAGGCTGTTACTTCCACTCTaGAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATG +
Preference number: 3 (lower is better)
Translates to: KSICCTRLLLPL*KQVPSQEASSM
Trigger: CATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGATACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp CATGTTACAGGGGTGCTTATAAACGGGAGGTGCTTGTaGCACTGTCCCAAGAGTATCTGCTGTACCAGGCTG +
Preference number: 3 (lower is better)
Translates to: HVTGVLINGRCL*HCPKSICCTRL
Trigger: CAGCCTGGTACAGCAGATACTCTTGGGACAGTGCCACAAGCACCTCCCGTTTATAAGCACCCCTGTAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR GCA 72 bp GTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTaGAATGAAGCCATGGTTCATCTCAGGCATAGCCAG +
Preference number: 3 (lower is better)
Translates to: VLSQVAIFAQRS*NEAMVHLRHSQ
Trigger: CTGGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CCA 72 bp TTGCCATCTTTGCCCAGAGATCTTGCAATGAAGCCATaGTTCATCTCAGGCATAGCCAGTGACTTGCGACAT +
Preference number: 3 (lower is better)
Translates to: LPSLPRDLAMKP*FISGIASDLRH
Trigger: ATGTCGCAAGTCACTGGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGTGGCTCACGTCAGCCTaGGCCTGGAGTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRWLTSA*AWSMVL
Trigger: CAGCACCATACTCCAGGCTCAGGCTGACGTGAGCCA...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGCCTGGACCTCAGCCCTaGAGGCCTGGTGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRPGPQP*RPGVSS
Trigger: TGAGGAAACACCAGGCCTTCAGGGCTGAGGTCCAGG...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAATTGTTCTCCAGGAAGTaGACGCGCAGGCGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKLFSRK*TRRRPG
Trigger: TCCGGGCCGCCTGCGCGTGCACTTCCTGGAGAACAA...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAAGCCACCCCAAACCCTaGTGCTGCTGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKSHPKP*CCCSRL
Trigger: GAGCCTGCTGCAGCAGCACCAGGGTTTGGGGTGGCT...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGATATCCGCCCAGCTGTaGTACTCTTCCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRISAQL*YSSCRR
Trigger: CCTCCGGCAGGAAGAGTATCACAGCTGGGCGGATAT...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGGCCAGTTCCTTCACTTaGGCCCGGTGCTCCAACATG +
Preference number: 4 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRASSFT*ARCSNM
Trigger: CATGTTGGAGCACCGGGCTCAAGTGAAGGAACTGGC...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGTCAAGATCTGCTCCTaGGCCTGGACCTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKVKICS*AWTSAL
Trigger: CAGGGCTGAGGTCCAGGCTCAGGAGCAGATCTTGAC...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAACCAGCAGGGCTTCCTTaGCAGACAGCAAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKPAGLP*QTAKPH
Trigger: GTGCGGCTTTGCTGTCTGCCAAGGAAGCCCTGCTGG...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCATCATGCCAGCACTaGGCAGGGCAGTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKASCQH*AGQLRA
Trigger: CGCTCTCAACTGCCCTGCCCAGTGCTGGCATGATGC...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGTCCATTCCTGGACTTTaGCCTCCAGGTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRSIPGL*PPGWSR
Trigger: CCTGGACCAACCTGGAGGCCAAAGTCCAGGAATGGA...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTTGGGCACCTTGGCCCTaGGGAAGGCCAGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGWAPWP*GRPGRG
Trigger: GCCACGCCCTGGCCTTCCTCAGGGCCAAGGTGCCCA...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGATGGGTCCTGTGGGCTaGCACCTGGGCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGMGPVG*HLGLQQ
Trigger: CTGCTGGAGGCCCAGGTGTCAGCCCACAGGACCCAT...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGACTTGAACCTCTGGTaGCACTTCTGGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKDLNLW*HFWLSS
Trigger: GGAGGAGAGCCAGAAGTGTCACCAGAGGTTCAAGTC...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATGCGCTGGGCCAGCTCTaGAGGGCCCAGGCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHALGQL*RAQALS
Trigger: CGAGAGGGCCTGGGCCCTGCAGAGCTGGCCCAGCGC...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCGCGCTGGCCACCTCCTaGGACTGTGGAGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPALATS*DCGESE
Trigger: CTCAGACTCTCCACAGTCCCAGGAGGTGGCCAGCGC...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAACTCACGGCAGCTGGATaGCTCAGAAGCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKLTAAG*LRSSFS
Trigger: TGAGAAGCTGCTTCTGAGCCATCCAGCTGCCGTGAG...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCCAGCGACGGCCAGCTTaGTGGTCAGCCAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPQRRPA*WSARHP
Trigger: TGGATGCCTGGCTGACCACCAAGCTGGCCGTCGCTG...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGCGCATGGCAGGCAGTaGGTCTGGGAAGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIAHGRQ*VWEVPS
Trigger: GCTCGGGACTTCCCAGACTCACTGCCTGCCATGCGC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGCATGGCCTGGCTCCTaGAGGCCTCTGCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIAWPGS*RPLPSP
Trigger: TGGAGAGGGCAGAGGCCTGCAGGAGCCAGGCCATGC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGCCAGGTTCCCTGCACTaGTTCTGCCCTTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRPGSLH*FCPFQW
Trigger: CCACTGGAAAGGGCAGAAGCAGTGCAGGGAACCTGG...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGCCTGCCCGGTTTCTGTaGTCTGCAGGGCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVPARFL*SAGLPP
Trigger: TGGAGGGAGCCCTGCAGAGCACAGAAACCGGGCAGG...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGACCTGCGGACTTGTCTaGAGAGCTGCAGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRTCGLV*RAAGSA
Trigger: AGCACTGCCTGCAGCTCTGCAGACAAGTCCGCAGGT...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGCTGCCTGTCCATGGCTaGTTCCAGCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVLPVHG*FQLLLG
Trigger: GCCCAGGAGGAGCTGGAAGCAGCCATGGACAGGCAG...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGCTCCCTCAGGGTCTaGATCTTGGCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGRSLRV*ILAWPR
Trigger: CCTGGGCCAGGCCAAGATGCAGACCCTGAGGGAGCG...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCTTGGTCCAGGCCCCCTaGACCTTGGTGAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPLVQAP*TLVSHS
Trigger: TGAGTGGCTCACCAAGGTGCAGGGGGCCTGGACCAA...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCTCAGAGTGTCCACCCTaGTGCAGGCTGTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPSECPP*CRLWAV
Trigger: CACAGCCCACAGCCTGCACCAGGGTGGACACTCTGA...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCACGCAGCTCCTCCAGCTaGTGTCCCCGGGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLARSSSS*CPRALA
Trigger: AGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTGCG...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGTGGCCTCAGCGTCCTaGCCCAGGTCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIVASAS*PRSSLS
Trigger: GGACAGTGAGGACCTGGGCCAGGACGCTGAGGCCAC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGGCCTCTGCCCGTaGTCCCAGGGTGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAEGLCP*SQGAAE
Trigger: CTCCGCAGCACCCTGGGATCACGGGCAGAGGCCCTC...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGAGGGTGGCTCTGACTaGGGAGCTCTTCGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVEGGSD*GALRLA
Trigger: AGCAAGGCGAAGAGCTCCTCAGTCAGAGCCACCCTC...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCACCTCCTGCTGTTGGTaGACACTGGCGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPTSCCW*TLASSS
Trigger: TGAGCTGGACGCCAGTGTTCACCAACAGCAGGAGGT...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAAATACCTCCGTCTCCTaGAGCTGCAGCAGGATCTTA +
Preference number: 4 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKNTSVS*SCSRIL
Trigger: TAAGATCCTGCTGCAGCTGCAGGAGACGGAGGTATT...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGCTGCCAGGTTCCCTaGACTGCTTCTGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPSCQVP*TASALS
Trigger: GGAAAGGGCAGAAGCAGTGCAGGGAACCTGGCAGCT...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGGCCTTCATCAGTTCCTaGACCTGCTGCTCCATGCCT +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRAFISS*TCCSMP
Trigger: AGGCATGGAGCAGCAGGTGCAGGAACTGATGAAGGC...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGCCCTGCAGGGTCACTaGCTGCCTCAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIALQGH*LPQLLP
Trigger: TGGGAGAAGCTGAGGCAGGCAGTGACCCTGCAGGGC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGACACCAGGCTGTGGTaGAGCTCGGCCAGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIDTRLW*SSASAR
Trigger: CCTAGCACTGGCCGAGCTCCACCACAGCCTGGTGTC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGTCCTCTCTTGGACCCTaGTCCACTGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRSSLGP*STGPGH
Trigger: GTGCCCAGGCCCAGTGGACCAGGGTCCAAGAGAGGA...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCGCTTCCAGCTCCTCCTaGGCTCCCAGGAGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPASSSS*APRSSP
Trigger: GGGCGAACTCCTGGGAGCCCAGGAGGAGCTGGAAGC...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGCAGGCTTGGGACTaGCCCTGCAACTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPRQAWD*PCNSCT
Trigger: AGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCT...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATCCGGCTGTCTTCCGCTaGCACCAGACCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHPAVFR*HQTSRA
Trigger: AGCCCTGCTGGTCTGGTGTCAGCGGAAGACAGCCGG...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCCCTCGCTTGCTCTGTaGGTGCCTCTGTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGPSLAL*VPLSSG
Trigger: TCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGG...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGCCTCATCAGCATCCCTaGAGAACTGTAAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRPHQHP*RTVRGA
Trigger: GGCTCCTCTTACAGTTCTTCAGGGATGCTGATGAGG...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTGCGGCAGCCCGCGCCTaGTCCTCTAGCTCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCAAARA*SSSSRS
Trigger: GCTGCGCGAGCTAGAGGAGCAGGCGCGGGCTGCCGC...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCACCCAAACCCTGGTGCTaGTGCAGCAGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLAPKPWC*CSRLWA
Trigger: GGCCCAGAGCCTGCTGCAGCAGCACCAGGGTTTGGG...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGGTTTCTGTGCTCTaGAGGGCTCCCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRPVSVL*RAPSRC
Trigger: GCATCTGGAGGGAGCCCTGCAGAGCACAGAAACCGG...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATTCTAGGGCCTGGCCCTaGAGGGTCACTGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHSRAWP*RVTACL
Trigger: GAGGCAGGCAGTGACCCTGCAGGGCCAGGCCCTAGA...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCCAGTCCTGCAGATCCTaGAGCAGGGTCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPQSCRS*SRVWSF
Trigger: GAAACTCCAGACCCTGCTGCAGGATCTGCAGGACTG...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGCGCTTGCTCTGTGAGTaGCTCTGTCCTCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGRLLCE*LCPQEQ
Trigger: CTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCG...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTATCGTGGCTGGGTCCTaGTGGCCCTCATCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAIVAGS*WPSSRA
Trigger: GGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGAT...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCAGAGCCACCTCCAGCTaGTGCACCCGGGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVRATSS*CTRAAT
Trigger: GGTGGCCGCCCGGGTGCAGCAGCTGGAGGTGGCTCT...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGAGCTCCACCAAAGTCTaGTGGGCCTCCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: THYNICNNQDRLREAMHQSSTKV*WASRAC
Trigger: GCAGGCCCTGGAGGCCCAGCAGACTTTGGTGGAGCT...CTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATGCCAGCTCCAGCCTCTaGCGCAGCTGTTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHASSSL*RSCCRL
Trigger: GAGCCTGCAACAGCTGCGGCAGAGGCTGGAGCTGGC...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp ACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGCTCACAGCCTGCAGCTaGGCCAGCACCCTAGGACTG +
Preference number: 4 (lower is better)
Translates to: THYNICNNQDRLREAMHQLTACS*ASTLGL
Trigger: CAGTCCTAGGGTGCTGGCCCAGCTGCAGGCTGTGAG...CTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTGCTGCCTCCCTTCTGTaGGGGGCTGCTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGAASLL*GAAVPQ
Trigger: CTGTGGAACAGCAGCCCCCCACAGAAGGGAGGCAGC...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTCCCATGGCTGCTGGTTaGGAAGCTGGTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIPMAAG*EAGSGL
Trigger: CAGCCCAGAACCAGCTTCCCAACCAGCAGCCATGGG...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTACAGGTTCTGGATCCTaGTGCCCACCCGTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRITGSGS*CPPVLV
Trigger: GACTAGGACGGGTGGGCATCAGGATCCAGAACCTGT...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCATCCGCCAGCGCCCCGTaGTCTCCTTCTGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSSASAP*SPSACG
Trigger: CCCGCAGGCAGAAGGAGATCACGGGGCGCTGGCGGA...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAAGCTCCCCAAGCTGGTaGGTGACAGCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQASSPSW*VTASTP
Trigger: GGGGGTGGAGGCTGTCACTCACCAGCTTGGGGAGCT...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTGGGTACGTCGGGCTCTaGCAAGAGACACCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAGYVGL*QETPGC
Trigger: ACAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCC...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTTGTTCCACGATATGCTaGGCTCGAGGGTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRICSTIC*ARGCPE
Trigger: CTCTGGGCACCCTCGAGCTCAGCATATCGTGGAACA...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCATCTGCCCACAGCCATTaGTGGGCTCTGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: DALQHLQQPGSAAGGHAPSAHSH*WALSLS
Trigger: GCTCAGGCTCAGAGCCCATCAATGGCTGTGGGCAGA...TGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGGGTGGCCGCATTGCCTaGGGAGGTGCTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRGGRIA*GGAVLE
Trigger: TTCAAGAACAGCACCTCCTCAGGCAATGCGGCCACC...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATATGCCTCCTGGGCTGTaGGGACCTCCACTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHMPPGL*GPPLGG
Trigger: GCCACCTAGTGGAGGTCCTCACAGCCCAGGAGGCAT...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGGCTCCTGCAGGCCTCTaGCCTCTCCAGTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLAPAGL*PLQFCP
Trigger: TGGGCAGAACTGGAGAGGGCAGAGGCCTGCAGGAGC...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGCTGCCGGAGGATGTCTaGCATCTCACCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: THYNICNNQDRLREAMHQLPEDV*HLTQGL
Trigger: CAGGCCTTGGGTGAGATGGCAGACATCCTCCGGCAG...CTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCAGGGCTTCCAGCTGCTaGCACCACCTTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGRASSC*HHLCFR
Trigger: CCTGAAGCAAAGGTGGTGGCAGCAGCTGGAAGCCCT...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTTCTTGGCCAAACCCCTaGAGCTCCAGCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGSWPNP*SSSPSQ
Trigger: TTGGGAGGGGCTGGAGCTGCAGGGGTTTGGCCAAGA...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGTCTTGTCCTCTAGCTTaGAATGCTGTCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRSCPLA*NAVSAA
Trigger: GGCTGCAGAGACAGCATTGCAAGCTAGAGGACAAGA...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCGTCCTCAGCCTGGGTTaGTGCCCTGACAAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGVLSLG*CPDKVA
Trigger: GGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGAC...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTGCCTCCAGCAGGTCATaGCTCTGCAGCAGCGACACT +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAASSRS*LCSSDT
Trigger: AGTGTCGCTGCTGCAGAGCCATGACCTGCTGGAGGC...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGTGGACCCTGGTCCACTaGGCCTGGGCACTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRWTLVH*AWALCS
Trigger: GCTGCACAGTGCCCAGGCCCAGTGGACCAGGGTCCA...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGTTGCTGGTGTTGGGTaGCTAGCTTGCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIVAGVG*LACSAG
Trigger: CCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAAC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAAGGTGTCCCCTCCTCTaGCCACCTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLARCPLL*PPASCW
Trigger: CCAGCAGGAAGCAGGTGGCCAGAGGAGGGGACACCT...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCACCCTGGTGCAGGCTGTaGGCTGTGGCCTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLAPWCRL*AVASNA
Trigger: TGCATTGGAGGCCACAGCCCACAGCCTGCACCAGGG...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACGTGGCTGGGTCCTGCTaGCCCTCATCCAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHVAGSC*PSSRAA
Trigger: GGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCAC...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTTGGCCTGCCTGTCCATaGCTGCTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGWPACP*LLPAPP
Trigger: AGGAGGAGCTGGAAGCAGCCATGGACAGGCAGGCCA...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATAGGCAGTGGCCTTCCTaGAGGCAGGCTTGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHRQWPS*RQAWDW
Trigger: CCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCT...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCAGAGGAGTCCCAGGATaGGTGACTGGTCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPRGVPG*VTGPHP
Trigger: TGGATGGGGACCAGTCACTCATCCTGGGACTCCTCT...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGCAGGGCCCTGGTTCTTaGGCTGCAGTGACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVQGPGS*AAVTSF
Trigger: AAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTG...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGTCTTCCACCTATTGTTaGGCTGGTTTTGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVSSTYC*AGFAAG
Trigger: GCCAGCGGCAAAACCAGCTCAACAATAGGTGGAAGA...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTTCCGTCTCCTGCAGCTaGAGCAGGATCTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRISVSCS*SRILAS
Trigger: ACTGGCTAAGATCCTGCTGCAGCTGCAGGAGACGGA...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGCTAGGGCTTTAGCCTaGAGCACCTCCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIARALA*STSTLV
Trigger: TACCAGTGTGGAGGTGCTGCAGGCTAAAGCCCTAGC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATGCTGCGCAGAAACTGTaGTCGCTGGAGGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHAAQKL*SLEGLL
Trigger: GAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGC...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGTTGTGTCCCTGGGGCTaGAATGTTTGGAACAGTGCG +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVLCPWG*NVWNSA
Trigger: CGCACTGTTCCAAACATTGCAGCCCCAGGGACACAA...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGCTTGGCTTTCAGTTCTaGCCACAGCCATTGATGGGC +
Preference number: 4 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGLGFQF*PQPLMG
Trigger: GCCCATCAATGGCTGTGGGCAGAACTGAAAGCCAAG...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGCTGGCCCCGGCTCTCTaGCAGTTCCTTCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLLAPAL*QFLHLS
Trigger: GCTCAAGTGAAGGAACTGGCAGAGAGCCGGGGCCAG...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCAGAGCTGCAGGCAGTaGTCAAGGTTCAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRQSCRQ*SRFRPM
Trigger: CATTGGCCTGAACCTTGAGCACTGCCTGCAGCTCTG...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCACCCCGGGCCCAGTCCTaGAGATCCTGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSPRAQS*RSCSRV
Trigger: GACCCTGCTGCAGGATCTGCAGGACTGGGCCCGGGG...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACCAGGGCTGCAGGGGGTaGCCTGTGTGGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHQGCRG*PVWPSQ
Trigger: CTGAGATGGCCACACAGGGCACCCCCTGCAGCCCTG...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTAGCATTCTCTGCAGATaGAGGACCTTGAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGASILCR*RTLRAP
Trigger: GGGGGCCCTCAAGGTCCTGCATCTGCAGAGAATGCT...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGCTGCTTTCTGCTCTCTaGAGCAGCCGTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLLLSAL*SSRAWA
Trigger: GGCCCATGCACGGCTGCTGCAGAGAGCAGAAAGCAG...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATTCCAGCTGGTACAGGTaGAGCTGTTCACGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHSSWYR*SCSRSA
Trigger: GGCGCTGCGTGAACAGCTGCACCTGTACCAGCTGGA...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTAGGAAGGCCAGGGCGTaGCTGTTGTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGARKARA*LLFSRK
Trigger: CTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCT...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAGTTCTGCCCAGCGCTaGGCCAGCTCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITSSAQR*ASSAGP
Trigger: GGGCCCTGCAGAGCTGGCCCAGCGCTGGGCAGAACT...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGGCAGCCTTTGCTGCATaGCCTGGCTCCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRAAFAA*PGSCRP
Trigger: AGGCCTGCAGGAGCCAGGCCATGCAGCAAAGGCTGC...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTGGAAGCGCCCTTCCTaGGGCAGGATGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLWKRPS*GRMAAS
Trigger: GGAGGCTGCCATCCTGCCCCAGGAAGGGCGCTTCCA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGTGCTGCAGCAGGCTCTaGGCCTCCCTTATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLCCSRL*ASLMSS
Trigger: GGAGGACATAAGGGAGGCCCAGAGCCTGCTGCAGCA...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTTGCAGTTGCTGGTGTTaGGTGGCTAGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRICSCWC*VASLLC
Trigger: GCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCA...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCCCTTTCACCTCAGCCTaGAGCATCTTGTGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPPFTSA*SILCFR
Trigger: ACGAAAGCACAAGATGCTCCAGGCTGAGGTGAAAGG...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGAGCTCCCCAGGCCACTaGCTTTTAGGAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRSSPGH*LLGMPP
Trigger: AGGAGGCATTCCTAAAAGCCAGTGGCCTGGGGAGCT...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGAGGTGTGCAGAGCCTaGCCCCGGCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGEVCRA*PRLSAS
Trigger: ACTGGCAGAGAGCCGGGGCCAGGCTCTGCACACCTC...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATGCTGGACCCGCTGCTaGATCCAGTCCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQACWTRC*IQSSAW
Trigger: CCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGTCCTGGAGGCAGGCTTaGGACTGGCCCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLSWRQA*DWPCNS
Trigger: AGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGA...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTGCCTGGCCCAGGCTCTaGACTTCTCTGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIAWPRL*TSLLKA
Trigger: TGCTTTCAACAGAGAAGTCCAGAGCCTGGGCCAGGC...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTAGAAAGGTGTGGCCCTaGGTAGCCTGCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRIRKVWP*VACNSF
Trigger: GAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCT...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACGGACTGTGGAGAGTCTaGGACTGCCACCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHGLWRV*DCHRLT
Trigger: GGTCAGCCGGTGGCAGTCTCAGACTCTCCACAGTCC...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAACAGCGGCAAGGGCCTaGGTTCCTGGACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQTAARA*VPGHSS
Trigger: GGAGCTGTGTCCAGGAACTCAGGCCCTTGCCGCTGT...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTCTCCACTTCTTCCACTaGGCTCCCCAGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTLHFFH*APQATG
Trigger: GCCAGTGGCCTGGGGAGCTCAGTGGAAGAAGTGGAG...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCTGGGTTGCTGCCCTaGCAAAGTTGCCTATCATCA +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRPGLLP*QSCLSS
Trigger: TGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGG...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGCAGCGCCTGGCTTCTaGCAGGGACTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSAAPGF*QGLSAL
Trigger: CAGAGCTGAGAGTCCCTGTCAGAAGCCAGGCGCTGC...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCTCCTGCATCTCCTaGGCCCACGCTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLSSCIS*AHASNS
Trigger: GGAATTGCTAGCGTGGGCTCAGGAGATGCAGGAGCT...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCATGCCCTCTCCAGTTCTaGCCAGCGCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSCPLQF*PALGQL
Trigger: GAGCTGGCCCAGCGCTGGGCAGAACTGGAGAGGGCA...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGTGTAGCAGCCTTTGCTaGATGGCCTGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLCSSLC*MAWLLQ
Trigger: CTGCAGGAGCCAGGCCATGCAGCAAAGGCTGCTACA...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACGCTCGCTGGAGGGTCTaGTCCAGCAGGGTACGTCGG +
Preference number: 4 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHARWRV*SSRVRR
Trigger: CCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGC...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACGTCTGGACCTGGATCTaGCGGGCCACCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHVWTWI*RATCPC
Trigger: GCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCAGAC...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATGCCGCTCCTCTTTGCTaGACAGCTGAGCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHAAPLC*TAEPGC
Trigger: ACATCCAGGCTCAGCTGTGCAGCAAAGAGGAGCGGC...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTAAACCCTGGTGCTGCTaGAGCAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSKPWCC*SRLWAS
Trigger: GGAGGCCCAGAGCCTGCTGCAGCAGCACCAGGGTTT...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTAGGGCTCCCTCCAGATaGTCCATTGTCTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGARAPSR*SIVSWT
Trigger: TGTCCAGGAGACAATGGAGCATCTGGAGGGAGCCCT...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTAGGCTGTGGGCATCATaGCAGCACTGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTRLWAS*QHWAGQ
Trigger: CTGCCCTGCCCAGTGCTGGCATGATGCCCACAGCCT...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATTGGGGGCAGCACTGTaGCCACGCTCTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQALGAAL*PRSCRL
Trigger: GAGCCTACAAGAGCGTGGGCACAGTGCTGCCCCCAA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGGCTGCCAGCAGAGCTTaGTGGCCCATCTTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQAASRA*WPILVA
Trigger: GGCCACTAAGATGGGCCAGCAAGCTCTGCTGGCAGC...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCAGCGGGTGTTCCTGCTaGCAGCAGAGCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVSGCSC*QQSLLA
Trigger: GGCCAGCAAGCTCTGCTGGCAGCAGGAACACCCGCT...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTATCATCAGGGAGGTGTaGAGAGCCTGGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGIIREV*RAWPRL
Trigger: GAGCCGGGGCCAGGCTCTGCACACCTCCCTGATGAT...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGTGCAGGGTCACTGCCTaGCTCAGCTTCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRCRVTA*LSFSQR
Trigger: CCTCTGGGAGAAGCTGAGGCAGGCAGTGACCCTGCA...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTCCACTTCTGGGCTTTaGTCCAGACCTTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPSTSGL*SRPSTS
Trigger: GCTGGTGGAAGGTCTGGAGCAAAGCCCAGAAGTGGA...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATGCTGTAGCTGCTGTTaGCGGCCCTGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQACCSCC*RPCQDS
Trigger: GGAATCCTGGCAGGGCCGGCAACAGCAGCTACAGCA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTTGGGCCTTCAGGCCCTaGTCATGCCTCTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAWAFRP*SCLLSF
Trigger: AAAGCTCAAGAGGCATGAGCAGGGCCTGAAGGCCCA...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCAGCTCTGCTTCCATGTaGTCCAGCCACTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGSSASM*SSHFSS
Trigger: ACTGGAGAAGTGGCTGGAGCACATGGAAGCAGAGCT...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCATGGGCCTCCAGGGCCTaGTGCAGTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSWASRA*CSLLLL
Trigger: GAGGAGGAGGAGACTGCAGCAGGCCCTGGAGGCCCA...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGTGCTCCAGCGCCTCATaGTGCTCAAGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: THYNICNNQDRLREAMHQCSSAS*CSRNCL
Trigger: CAAGCAGTTCCTTGAGCAGCATGAGGCGCTGGAGCA...CTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAAAGGCTGCCAGTAGCTaGCGCATGGCAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAKAASS*RMAGSE
Trigger: CTCACTGCCTGCCATGCGCCAGCTACTGGCAGCCTT...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTAGTGTTGTCTGCAGCTaGAAGAGCAGGGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGASVVCS*KSRASV
Trigger: CACAGAGGCCCTGCTCTTCCAGCTGCAGACAACACT...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCCTTTGCTGCATGGCCTaGCTCCTGCAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSLCCMA*LLQASA
Trigger: GGCAGAGGCCTGCAGGAGCCAGGCCATGCAGCAAAG...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCATCTCACCCAAGGCCTaGAAGCGCCCTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVISPKA*KRPSWG
Trigger: GCCCCAGGAAGGGCGCTTCCAGGCCTTGGGTGAGAT...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCACCCGAGCCACAGTCTaGACCTGGATCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITTRATV*TWICRA
Trigger: GGCCCGGCAGATCCAGGTCCAGACTGTGGCTCGGGT...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCTTCAGAAAGTACTGCTaGACAGTGACAGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPFRKYC*TVTACC
Trigger: GCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAA...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCCTCTGGTGAGCCTTaGGGGCAGCACTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSASGEP*GQHCAH
Trigger: GTGGGCACAGTGCTGCCCCCAAGGCTCACCAGAGGC...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGACCCCACACAGGTCCTaGGCCACATCGTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRTPHRS*ATSLGR
Trigger: CCTCCCTAACGATGTGGCCCAGGACCTGTGTGGGGT...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTAGCCTCTCATGTCTCTaGAGCTGGTTCTCTACCCCA +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRISLSCL*SWFSTP
Trigger: TGGGGTAGAGAACCAGCTCCAGAGACATGAGAGGCT...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGGCTGTTCTTGAAGCATaGCCTGCAGCTTCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGAVLEA*PAASLA
Trigger: AGCAAGAGAAGCTGCAGGCCATGCTTCAAGAACAGC...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTAACTCCCTCCACTTCTaGGCTTTGCTCCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRINSLHF*ALLQTF
Trigger: GAAGGTCTGGAGCAAAGCCCAGAAGTGGAGGGAGTT...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCCTGGCCATCTTCCTCTaGCAGTTGGTCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPLAIFL*QLVCSS
Trigger: TGAGCTGCAGACCAACTGCCAGAGGAAGATGGCCAG...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTCGACGGCCAGCTTGGTaGTCAGCCAGGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGRRPAW*SARHPG
Trigger: TCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTCG...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCGCTCAAGGAACTGCTTaGCCCCCACCACATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LATSVACPLTGAVFCTLVAQGTA*PPPHPQ
Trigger: CTGGGGATGTGGTGGGGGCCAAGCAGTTCCTTGAGC...GACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCGGATGGTCCAGGAAGTaGATGCATTGTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPGWSRK*MHCGSE
Trigger: CTCAGACCCACAATGCATTCACTTCCTGGACCATCC...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp ACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGTGCTCTGCAGGGACTTaGACCTCTGGTGACACTTCT +
Preference number: 4 (lower is better)
Translates to: THYNICNNQDRLREAMHQCSAGT*TSGDTS
Trigger: AGAAGTGTCACCAGAGGTTCAAGTCCCTGCAGAGCA...CTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCCCACCTGGGTCTGGATaGGGCCCATCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITPPGSG*GPSPAA
Trigger: TGCAGCAGGAGATGGGCCTCATCCAGACCCAGGTGG...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAGCTGAGCCTGGAGCTTaGGGACATGGCCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLAAEPGA*GHGLSH
Trigger: ATGAGATAGGCCATGTCCGCAAGCTCCAGGCTCAGC...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTCGAGCAGCTGGGCAATaGCAAGCTGCTGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSRAAGQ*QAAAQP
Trigger: TGGCTGAGCAGCAGCTTGGCATTGCCCAGCTGCTCG...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGCTCGGAGTGTTGTCTaGAGCTGGAAGAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRARSVV*SWKSRA
Trigger: GGCCCTGCTCTTCCAGCTGCAGACAACACTCCGAGC...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACCAGCCTCTGAGTGGCTaGCTCCACTGTGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNQPLSG*LHCGWV
Trigger: GACCCAGCCACAGTGGAGGCAGCCACTCAGAGGCTG...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGACTGCACACCTCCATaGCACGTGTCAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQADCTPP*HVSAAG
Trigger: TCCTGCAGCTGACACGTGGCATGGAGGTGTGCAGTC...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTCGGGCCACCTGCCCTTaGGCTTGCTTTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSRATCP*ACFSSD
Trigger: GTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCG...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACGTGATCCCAGGGTGCTaGGGAGCCACCCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNVIPGC*GATPNP
Trigger: AGGGTTTGGGGTGGCTCCGCAGCACCCTGGGATCAC...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGCGGCATTGGGCATGTaGTCAGCTGCCCATGTGAGC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQAALGM*SAAHVS
Trigger: GCTCACATGGGCAGCTGAGCACATGCCCAATGCCGC...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCTGGCCACCTGCTTCCTaGTGGACAGCCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSWPPAS*WTASSA
Trigger: TGCAGAGCTGGCTGTCCAGCAGGAAGCAGGTGGCCA...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCGCACCTGCTGCTCCATaGCTGCCAACTCGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSAPAAP*LPTRVP
Trigger: TGGAACGCGAGTTGGCAGGCATGGAGCAGCAGGTGC...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAACCTGGACACAGCTCCTaGACTCTGCCTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQPGHSS*TLPPAF
Trigger: GAAGGCTGGAGGCAGAGTGCAGGAGCTGTGTCCAGG...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGTTCTGGAAGATCACGTaGTTTCGGATCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVFWKIT*FRINCS
Trigger: GGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAA...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTTCTCCAAATCTTCAGTaGCCTCTGGGGCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGASPNLQ*PLGPRS
Trigger: TGATCTGGGCCCCAGAGGGCACTGAAGATTTGGAGA...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCTGGCCCTGCAACTCTTaGACTTCCTTGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LATSVACPLTGAVFCTLVWPCNS*TSLACL
Trigger: CAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCA...GACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGATCTCTGCAGCAGCCGTaGATGGGCCTCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRSLQQP*MGLSHS
Trigger: GCTGTGAGAGAGGCCCATGCACGGCTGCTGCAGAGA...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACTGCTGCTGCTGCTGCTaGTGCTGCAGAAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHCCCCC*CCRRGC
Trigger: ACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCA...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATGGCCCTGGGTAGCCTaGAACAGCTTCTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAWPWVA*NSFWLH
Trigger: ATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGCTCCTGCATACACTCTaGCACCTCTGGGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLLLHTL*HLWGQE
Trigger: TTCCTGTCCCCAGAGGTGGCAGAGTGTATGCAGGAG...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATAAGCCAGTTCCCCAGTaGCACTTGGCACTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHKPVPQ*HLALLP
Trigger: AGGCAGAAGTGCCAAGTGGCACTGGGGAACTGGCTT...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCCGCTCAGCCTCTGAGTaGCTGCCTCCACTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIARSASE*LPPLWL
Trigger: CAGCCACAGTGGAGGCAGCCACTCAGAGGCTGAGCG...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAAGAAACTGTGCTCGCTaGAGGGTCTGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQARNCAR*RVCSSR
Trigger: CCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCT...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTAGAGCCTTCAGCTGCTaGCTGTGCTGGCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGRAFSC*LCWPRS
Trigger: GCTCCTAGGCCAGCACAGCCAGCAGCTGAAGGCTCT...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGTGCAGTAAGGCCTCATaGCTGGCACAGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQCSKAS*LAQVAM
Trigger: CATGGCCACCTGTGCCAGCCATGAGGCCTTACTGCA...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTGCTCACTCCTCTCTTaGACCCTGGTCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGCSLLS*TLVHWA
Trigger: GGCCCAGTGGACCAGGGTCCAAGAGAGGAGTGAGCA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCCACCTGCTTCCTGCTaGACAGCCAGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLPPASC*TASSAG
Trigger: ACCTGCAGAGCTGGCTGTCCAGCAGGAAGCAGGTGG...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCTTTGCCGCTGGCAGATaGTCTCGGATTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LATSVACPLTGAVFCTLVFAAGR*SRIPQG
Trigger: GCCCTGAGGAATCCGAGACCATCTGCCAGCGGCAAA...GACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATATCTTCAGTGCCCTCTaGGGCCCAGATCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHIFSAL*GPDQGF
Trigger: GAATCCCTGATCTGGGCCCCAGAGGGCACTGAAGAT...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTAGGGGGTGCCCTGTGTaGCCATCTCAGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSRGCPV*PSQPVV
Trigger: GACTACAGGCTGAGATGGCCACACAGGGCACCCCCT...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCTCCACCAAAGTCTGCTaGGCCTCCAGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIASTKVC*ASRACC
Trigger: GCAGCAGGCCCTGGAGGCCCAGCAGACTTTGGTGGA...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCTGCAGCAGCCGTGCATaGGCCTCTCTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITCSSRA*ASLTAC
Trigger: GCAGGCTGTGAGAGAGGCCCATGCACGGCTGCTGCA...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTCTTCCTCCAGCAGGGTaGTCTTCTCCTGTATCCATC +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGALPPAG*SSPVSI
Trigger: GATGGATACAGGAGAAGACCACCCTGCTGGAGGAAG...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
3UTR CAA 72 bp AGGCCTCGAGCATGGACGTTCCGGTCCTGTCACAGGTaGCCATCTTTGCCCAGAGATCTTGCAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RPRAWTFRSCHR*PSLPRDLAMKP
Trigger: TGGCTTCATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGCTCGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTGTTCTCTGGCCCGATaGAGGGAATGGGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGCSLAR*REWAPW
Trigger: CCAAGGTGCCCATTCCCTTCATCGGGCCAGAGAACA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGGCTCTCTGGGGAGCCTaGCTCCATCACCTCTATGGT +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLALWGA*LHHLYG
Trigger: ACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGC...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCTGGGCAATGCCAAGCTaGTGCTCAGCCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSWAMPS*CSATRK
Trigger: CTTCCGAGTGGCTGAGCAGCAGCTTGGCATTGCCCA...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCCCTCCTCCTCACAGCTaGGCAGAAACTGTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVPPPHS*AETVLA
Trigger: AGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGG...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCCAATGTTTGGAACAGTaGGGTCTGCTTCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPQCLEQ*GLLLQP
Trigger: TGGCTGGAGAAGCAGACCGCACTGTTCCAAACATTG...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTGCAGCATCAGGACCTaGTCCCAAAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLCSIRT*SQSSLL
Trigger: GAGCAGGCTGCTTTGGGAGCAGGTCCTGATGCTGCA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGACTGGACAGCCAGCTCTaGAGGTCCTCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRLDSQL*RSSASL
Trigger: GAGAGAAGCTGAGGACCTGCAGAGCTGGCTGTCCAG...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACGCCTGCAGCTTCTCTTaGTTGAGTGCCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNACSFS*LSAQAW
Trigger: CCAGGCCTGGGCACTCAAGCAAGAGAAGCTGCAGGC...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGGAAATCGTCTTTAGCTaGTCATTCAGAGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTREIVFS*SFRADS
Trigger: GGAGTCGGCTCTGAATGAGCAGCTAAAGACGATTTC...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACAGTTGCTGGACCCGCTaGTGGATCCAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNSCWTR*WIQSSA
Trigger: GGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACT...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAACCCAGAAACAGCTGCTaGTCCAAGGCCTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQPRNSC*SKACCS
Trigger: GCTACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGG...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGAGCCCAGAAACAGCTaGTGCTCCAAGGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTEPRNS*CSKACC
Trigger: ACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGGCTC...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGTCAGCCTGGAAATTCTaGTGCTTCTGCAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGSAWKF*CFCNCV
Trigger: AACACAGTTGCAGAAGCAGCAGAATTTCCAGGCTGA...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCCCTTGTAGCAGCTTCTaGCCCTCCATCTGGACCTCC +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSPCSSF*PSIWTS
Trigger: GGAGGTCCAGATGGAGGGGCAGAAGCTGCTACAAGG...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATAGCCAGCCAGGATCCTaGTTCCAGGAGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNSQPGS*FQELHQ
Trigger: TTGGTGGAGCTCCTGGAAGCAGGATCCTGGCTGGCT...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACACAGCAAAGCCGCACTaGCCCCAAACTCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHTAKPH*PQTPPC
Trigger: ACAGGGAGGAGTTTGGGGCCAGTGCGGCTTTGCTGT...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGGATGGAGCACTCATCTaGATGCAGGGCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRDGALI*MQGCHI
Trigger: GATGTGGCAGCCCTGCATCCAGATGAGTGCTCCATC...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCCTTCCTGGGGCAGGATaGCAGCCTCCAGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITLPGAG*QPPERS
Trigger: TGAGCGTTCTGGAGGCTGCCATCCTGCCCCAGGAAG...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATGCAGCACCTCCACACTaGTACCCTGGGAGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNAAPPH*YPGSLA
Trigger: AGCTAGACTCCCAGGGTACCAGTGTGGAGGTGCTGC...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATTCTGCCCTTTCCAGTaGATCTGGCTGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAFCPFQ*IWLCQG
Trigger: CCCCTGACACAGCCAGATCCACTGGAAAGGGCAGAA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGTCTTCCAACATGTACTaGATTCTCACAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRSSNMY*ILTGLQ
Trigger: CTGCAGCCCTGTGAGAATCCAGTACATGTTGGAAGA...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCACGCTGCCCCATGCTTTaGACCAGGTTAAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQARCPML*TRLRLS
Trigger: AGAGAGCCTTAACCTGGTCCAAAGCATGGGGCAGCG...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGATGCAGTTACCTCATTaGAATCCTGCAAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: RPCTRPCSGGESANSLGRMQLPH*NPAKMS
Trigger: GGACATTTTTGCAGGATTCCAATGAGGTAACTGCAT...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAACTCTAGGCAGCGCCTaGCTTCTGACAGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRTLGSA*LLTGTL
Trigger: GAGAGTCCCTGTCAGAAGCCAGGCGCTGCCTAGAGT...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGACACTCTGCCACCTCTaGGGACAGGAAGTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLTLCHL*GQEVAV
Trigger: AACGGCCACTTCCTGTCCCCAGAGGTGGCAGAGTGT...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTTGGGAAGCTGGTTCTaGGCTGCCTCCCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLLGSWF*AASLLW
Trigger: CCACAGAAGGGAGGCAGCCCAGAACCAGCTTCCCAA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTTGCTGGTTGGGAAGCTaGTTCTGGGCTGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTCWLGS*FWAASL
Trigger: AAGGGAGGCAGCCCAGAACCAGCTTCCCAACCAGCA...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTTGCATGTGTGTATGCTaGGCCTGGAGCTTGCGGACA +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTCMCVC*AWSLRT
Trigger: TGTCCGCAAGCTCCAGGCTCAGCATACACACATGCA...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCGTCTGGTGGACAAGATaGGTCACATGGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSVWWTR*VTWVLW
Trigger: CCACAGGACCCATGTGACTCATCTTGTCCACCAGAC...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTTCTCCAGCCAGGACTaGAGCTCCCTACAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVFSSQD*SSLQEL
Trigger: TAGCTCCTGTAGGGAGCTTCAGTCCTGGCTGGAGAA...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTGTGGGTCTGAGAGATaGGGGCATCCATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGCGSER*GHPSCW
Trigger: CCAGCAAGATGGATGCCCTCATCTCTCAGACCCACA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAATGCATTGTGGGTCTaGGAGATGAGGGCATCCATC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLNALWV*EMRASI
Trigger: GATGGATGCCCTCATCTCTCAGACCCACAATGCATT...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCACTTGCTGCTTATGTCTaGGGCTGTGGGCAACCTCGG +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSLAAYV*GCGQPR
Trigger: CCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAG...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGTGAAGCTTTaGCAGGGCCCTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTGPVKL*QGPKLL
Trigger: GAGAAGCTTAGGGCCCTGGCAAAGCTTCACAGGACC...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTTCAGGGCTTCCAGCTaGTGCCACCACCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGFRASS*CHHLCF
Trigger: GAAGCAAAGGTGGTGGCAGCAGCTGGAAGCCCTGAA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAATGCCACGTGTCAGCTaGAGGAGTTTCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAMPRVS*RSFSSF
Trigger: GAAGGAGGAGAAACTCCTGCAGCTGACACGTGGCAT...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAATACCAGGACCTTCTaGTGGGTCTGCTGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLNTRTF*WVCCRV
Trigger: TACCCTACAGCAGACCCAGCAGAAGGTCCTGGTATT...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCACCCTCCCAAAACTTCTaGTGTCTCTGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAPSQNF*CLCSHR
Trigger: TCTGTGGGAGCAGAGACAGCAGAAGTTTTGGGAGGG...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTTGGGCCTGGGCACTGTaGAGCAGCTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCWAWAL*SSSLIL
Trigger: CAAGATCAGAGAGCTGCTGCACAGTGCCCAGGCCCA...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTGGTCCAGGAAGTGAATaGATTGTGGGTCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAGPGSE*IVGLRD
Trigger: ATCTCTCAGACCCACAATGCATTCACTTCCTGGACC...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACACTGAGGCCTGCAGTTaGTGGTGTTGGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHTEACS*WCWVAS
Trigger: GCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGT...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTGGGCATGTGCTCAGCTaGCCATGTGAGCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCGHVLS*PCELQV
Trigger: AACCTGGAGCTCACATGGGCAGCTGAGCACATGCCC...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACAGTTCCTGCACCTGCTaGTCCATGCCTGCCAACTCG +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNSSCTC*SMPANS
Trigger: CGAGTTGGCAGGCATGGAGCAGCAGGTGCAGGAACT...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTATCAGTTCCTGCACCTaGTGCTCCATGCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTISSCT*CSMPAN
Trigger: GTTGGCAGGCATGGAGCAGCAGGTGCAGGAACTGAT...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATTGGGTCACAGCTTGCTaGTTTTGCTGGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNWVTAC*FCWTAA
Trigger: TGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCA...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTTTAGTGGCCCGTTGCTaGAGCTCCTCCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTLVARC*SSSLAF
Trigger: GAAAGCCAAGGAGGAGCTGCAGCAACGGGCCACTAA...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTTCCATCATTTCTTGCTaGTTATGTCTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRISIISC*LCLRLW
Trigger: CCACAGCCTCAGACATAAGCAGCAAGAAATGATGGA...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATGCTTGGGACTGGCCCTaGAACTCTTGCACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNAWDWP*NSCTSL
Trigger: CAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGC...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGACCACATCCCCAGCCTaGTTCTCCTTAGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRTTSPA*FSLESS
Trigger: GCTGCTTTCTAAGGAGAAGCAGGCTGGGGATGTGGT...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGTTGCCCATAGACTGTaGAGCTGGCCAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSVAHRL*SWPTPA
Trigger: TGCAGGTGTTGGCCAGCTCCACAGTCTATGGGCAAC...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTCCTTTCCAGTGGATCTaGCTGTGTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGPFQWI*LCQGLS
Trigger: AGAGAGCCCCTGACACAGCCAGATCCACTGGAAAGG...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGTGGAGGTTCCTCATTTaGTGTAGGAGAGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: RITTSATTRIGCGRPCTRWRFLI*CRRDKS
Trigger: AGACTTGTCTCTCCTACACCAAATGAGGAACCTCCA...CCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATCTTGCTCACGGCAGCTaGATGGCTCAGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNLAHGS*MAQKQL
Trigger: AAGCTGCTTCTGAGCCATCCAGCTGCCGTGAGCAAG...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGAGGTGCTGTCCTCCTGTGCATATaGGTTGCTATGCAACAGTTC +
Preference number: 4 (lower is better)
Translates to: HVSSPVTESRLEAASRGAVLLCI*VAMQQF
Trigger: GAACTGTTGCATAGCAACCCATATGCACAGGAGGAC...AGCACCTCTGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTGCAGCACGTGCTCATaGTCCTCTCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLCSTCS*SSPKVS
Trigger: GGACACCTTTGGAGAGGACCATGAGCACGTGCTGCA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCCGGGCCTGGGTCAACTaGCACAGTTCAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIARAWVN*HSSDQE
Trigger: TTCCTGGTCTGAACTGTGCCAGTTGACCCAGGCCCG...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGCTGCAGCTCCTCCTTaGCTTTCAGTTCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTAAAPP*LSVLPT
Trigger: TGTGGGCAGAACTGAAAGCCAAGGAGGAGCTGCAGC...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATCACCTATTGTTGAGCTaGTTTTGCCGCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHHLLLS*FCRWQM
Trigger: CATCTGCCAGCGGCAAAACCAGCTCAACAATAGGTG...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAATCTTTGGCGAGGCAGTaGCCTTCCTGGAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQSLARQ*PSWRQA
Trigger: AGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGA...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGCTCTTCCACATCTTTaGCGAGGCAGTGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSALPHL*RGSGLP
Trigger: AGGAAGGCCACTGCCTCGCCAAAGATGTGGAAGAGC...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAATGCTGGCCGAGCCGATaGGCCTCCATCTGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQCWPSR*ASICTL
Trigger: AAGAGTGCAGATGGAGGCCCATCGGCTCGGCCAGCA...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTAGATCCCATGGCTGCTaGTTGGGAAGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSRSHGC*LGSWFW
Trigger: CCAGAACCAGCTTCCCAACCAGCAGCCATGGGATCT...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTCTTGCCAAGATCCCATaGCTGCTGGTTGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGLAKIP*LLVGKL
Trigger: CAGCTTCCCAACCAGCAGCCATGGGATCTTGGCAAG...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGTTCGGGAGAAGTCAGTaGTGTCCACATTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRFGRSQ*CPHWCS
Trigger: GCTACACCAATGTGGACATCACTGACTTCTCCCGAA...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATATGGCCATCCTGCTCTaGCTGTCTCCCAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNMAILL*LSPNSS
Trigger: TGAAGAGTTGGGAGACAGTCAGAGCAGGATGGCCAT...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTTCATACAGCTCAACTaGGGCCTGCAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVFIQLN*GLQLLV
Trigger: CACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAA...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGGGTCTGGAGTTTCTaGACTTCATGGCCCACATCC +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHRVWSF*TSWPTS
Trigger: GGATGTGGGCCATGAAGTTCAGAAACTCCAGACCCT...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGATCCATTAGCTGTCTGTaGTCTTGCAACCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRSISCL*SCNQAS
Trigger: GGAGGCCTGGTTGCAAGAGCACAGACAGCTAATGGA...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTAGTGTTGATGGCCTCTaGCCAGTGGCCTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTSVDGL*PVAFSS
Trigger: ACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACT...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAACTTCTGCTGTCTCTaGTCCCACAGAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHNFCCL*SHRAFS
Trigger: GCTGAAGGCTCTGTGGGAGCAGAGACAGCAGAAGTT...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAATTGCAATGCTGTCTCTaGAGCCTCCGGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQLQCCL*SLRLEH
Trigger: GTGCTCCAGCCGGAGGCTGCAGAGACAGCATTGCAA...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACGCTAGGTCCACTCTCTaGAGGAACTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHARSTL*RNSWKL
Trigger: CAACTTCCAGGAGTTCCTGCAGAGAGTGGACCTAGC...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGATTGTTGAGCTGGTTTTaGCGCTGGCAGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VCLGLPQVTLTCQQPCHRLLSWF*RWQMVS
Trigger: CGAGACCATCTGCCAGCGGCAAAACCAGCTCAACAA...TCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCAGGCCCATCTCCTGCTaGAGCACTTTCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSRPISC*STFCLH
Trigger: ATGGAGACAGAAAGTGCTGCAGCAGGAGATGGGCCT...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGGCCTGGAAATTCTGCTaGTTCTGCAACTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLAWKFC*FCNCVC
Trigger: GCAAACACAGTTGCAGAAGCAGCAGAATTTCCAGGC...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACAGGGACTCTCAGCTCTaGTTCCATGTGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHRDSQL*FHVLQP
Trigger: TGGCTGGAGCACATGGAAGCAGAGCTGAGAGTCCCT...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAAGAGGGCAGCTTCTCCTaGACCCAGGCCATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQEGSFS*TQAISS
Trigger: TGAGGAAATGGCCTGGGTGCAGGAGAAGCTGCCCTC...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATTCTGTGTACAGGTTCTaGATCCTGATGCCCACCCGT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNSVYRF*ILMPTR
Trigger: ACGGGTGGGCATCAGGATCCAGAACCTGTACACAGA...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAACCCAGGATGAGTGACTaGTCCCCATCCACAATGTTC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQPRMSD*SPSTMF
Trigger: GAACATTGTGGATGGGGACCAGTCACTCATCCTGGG...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTTCCATTCCTGCAATTaGAGGGAAGCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLFHSCN*REASSW
Trigger: CCAGCTGCTGGCTTCCCTCCAATTGCAGGAATGGAA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCTCCAGTCCTGCCCAGTaGCTTTCTAGCTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITSSPAQ*LSSFWH
Trigger: GTGCCAGAAGCTAGAAAGCCACTGGGCAGGACTGGA...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATCCTGCTGGAGCATCTaGTGTTTCCTAATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQASCWSI*CFLMSP
Trigger: TGGGCTCATTAGGAAACACCAGATGCTCCAGCAGGA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCAGGGCCTCCCAAGCTTaGGTCACAGCTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIARASQA*VTACCF
Trigger: AAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCT...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCATCCTCTCCTTCTCCTaGATCCAGGTCTCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSILSFS*IQVSAR
Trigger: CCTAGCAGAGACCTGGATCCAGGAGAAGGAGAGGAT...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGTGGCTCAGAGCCTTGTaGCTATGGATCTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQWLRAL*LWISFS
Trigger: GGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCA...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACGTACCTGTCACCACCTaGCTCAGAGCCTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHVPVTT*LRALWL
Trigger: TAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTAC...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTTCACTGTCCAGAATATaGTCCCGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSSLSRI*SRSASQ
Trigger: CTGGCTGGCTGAACGGGACCATATTCTGGACAGTGA...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAATTCTGGCTCCATTCCTaGACTTTGGCCTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQFWLHS*TLASRL
Trigger: CAACCTGGAGGCCAAAGTCCAGGAATGGAGCCAGAA...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGTTCCCCAGTGCCACTTaGCACTTCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLFPSAT*HFCLPH
Trigger: ATGAGGAAGGCAGAAGTGCCAAGTGGCACTGGGGAA...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACGGCTATCTGCTGATGTaGATAATGGCTGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNGYLLM*IMAAWC
Trigger: GCACCAGGCAGCCATTATTCACATCAGCAGATAGCC...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCTGGCACAGGTGGCCATaGAATCATCTACTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVWHRWP*NHLLLG
Trigger: GCCAAGAAGTAGATGATTTCATGGCCACCTGTGCCA...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACATCTTGTGCTTTCGTTaGAGGCTGTGGGCATCATGC +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHILCFR*RLWASC
Trigger: GCATGATGCCCACAGCCTTCAACGAAAGCACAAGAT...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATCCAGGTCTCCATCTCTaGCACGTTCAGAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNPGLHL*HVQKVL
Trigger: CAGTACTTTCTGAACGTGTCAGAGATGGAGACCTGG...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTTCTGGACTTCTCTGTTaGAAGCACCAAACATGTCTT +
Preference number: 4 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGSGLLC*KHQTCL
Trigger: AAGACATGTTTGGTGCTTTCAACAGAGAAGTCCAGA...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTCTCTGTACGGACTTTaGTTGCCTTGTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGSLYGL*LPCSAP
Trigger: AGGGGCTGAACAAGGCAATCAAAGTCCGTACAGAGA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCACTCCATCTGCACTCTTaGCACCTCTTTTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLALHLHS*HLFFNS
Trigger: GCTATTGAAAAAGAGGTGTCAAGAGTGCAGATGGAG...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTGAGATCTACACACACTaGCTGGTGGCGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCEIYTH*LVAMEF
Trigger: GAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTC...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCTCCAATGGTGTCTCTaGCAAGCCTTTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRLQWCL*QAFSSL
Trigger: AAGACTGGAAAAGGCTTGGCAGAGACACCATTGGAG...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGCATCACCTCTATGGTTaGTCTTTGGAGGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLHHLYG*SLEVGD
Trigger: ATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATG...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTACAGCTCCTGCACTCTaGCTCCAGCCTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCTAPAL*LQPSSV
Trigger: AACTGATGAAGGCTGGAGGCAGAGTGCAGGAGCTGT...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCCTTCTCTTGCTTGAGTaGCCAGGCCTGGAACACTTG +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITLLLLE*PGLEHL
Trigger: CAAGTGTTCCAGGCCTGGGCACTCAAGCAAGAGAAG...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCTTCAGGCCCTGCTCATaGCTCTTGAGCTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSFRPCS*LLSFDR
Trigger: TCTGTCAAAGCTCAAGAGGCATGAGCAGGGCCTGAA...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCTTGGGAAGAAAGTCTaGCTTCTGTCCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCLGKKV*LLSSSL
Trigger: GAGGCTGGAGGACAGAAGGCAGACTTTCTTCCCAAG...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTTCTACACACACTGCCTaGTGGCGATGGAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSSTHTA*WRWSSV
Trigger: AACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGA...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATAGTTGTTTCTGCCGCTaGAAAAGCCAGGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNSCFCR*KSQEAA
Trigger: AGCAGCTTCCTGGCTTTTCCAGCGGCAGAAACAACT...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAATGCGTCCTCTCTGCATaGGATCTACACACACTGCCT +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQCVLSA*DLHTLP
Trigger: AGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCA...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCCTCTCTAGTTGTTTCTaGCGCTGGAAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSLSSCF*RWKSQE
Trigger: TTCCTGGCTTTTCCAGCGGCAGAAACAACTAGAGAG...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATCGCCACTTGAGTTTCTaGAGAATGTTGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNRHLSF*RMLLPA
Trigger: AGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCG...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGAGTTCTTTCCCAGCCTaGTGTAGCTCTTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLSSFPA*CSSSMY
Trigger: GTACATGGAAGAGCTACAGCAGGCTGGGAAAGAACT...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACGATAGAGGAGCAGGTTaGCATGGAAAGTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNDRGAG*HGKSST
Trigger: GGTGGAAGACTTTCCATGGCAACCTGCTCCTCTATC...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCTCCTTCAGCATTCTCTaGAGATGCAGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITSFSIL*RCRTLR
Trigger: CCTCAAGGTCCTGCATCTGCAGAGAATGCTGAAGGA...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAAGAAGGGCAACTGTTTaGTGTAACTGCTCAATGCGA +
Preference number: 4 (lower is better)
Translates to: DTNMSAALSQSLGWKLQARRATV*CNCSMR
Trigger: TCGCATTGAGCAGTTACAGCAAACAGTTGCCCTTCT...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTTGGCTTTCTAGCTTCTaGCACTGTTCCACGATATGC +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSWLSSF*HCSTIC
Trigger: GCATATCGTGGAACAGTGCCAGAAGCTAGAAAGCCA...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAGAGCTACCTCCTGCTaGAGCATCTGGTGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITRATSC*SIWCFL
Trigger: TAGGAAACACCAGATGCTCCAGCAGGAGGTAGCTCT...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGAATTCAGCAAGGGTCTaGAACCTCTGCTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLNSARV*NLCSRS
Trigger: AGATCTCGAGCAGAGGTTCCAGACCCTTGCTGAATT...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAATCATGTCTCTGGAGCTaGTTCTCTACCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQSCLWS*FSTPHR
Trigger: CCTGTGTGGGGTAGAGAACCAGCTCCAGAGACATGA...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTAGAGCTAGCACTTTCTaGAAGATCACGTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGRASTF*KITCFR
Trigger: CCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCT...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR TCA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATGTTTCAACCTGGTACTaGAACTTTGTAAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHVSTWY*NFVNSV
Trigger: CACTGAGTTTACAAAGTTTCAGTACCAGGTTGAAAC...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACCTTTGAGTCTTCCATaGGCTTCCTCTCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQPLSLP*ASSPPV
Trigger: TACAGGAGGAGAGGAAGCGCATGGAAGACTCAAAGG...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATCCAGAGTCTCCAGCCTaGTTATCACATTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNPESPA*LSHLAV
Trigger: AACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGG...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCGCATATGGGTTGCTATaGAACAGTTCTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIAAYGLL*NSSFPA
Trigger: GGCTGGGAAAGAACTGTTGCATAGCAACCCATATGC...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTTGGCAAAACAGGTTCTaGCCCTTAGGGCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCWQNRF*PLGLEI
Trigger: GATTTCAAGCCCTAAGGGGCAGAACCTGTTTTGCCA...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTCTGTCCATCATTTCTTaGTGCTTATGTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTLSIIS*CLCLRL
Trigger: CAGCCTCAGACATAAGCAGCAAGAAATGATGGACAG...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCACTGTCCAAGGAGATGTaGGAAATCTGGAAACGCAGA +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSLSKEM*EIWKRR
Trigger: TCTGCGTTTCCAGATTTCCCACATCTCCTTGGACAG...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCTTTCGAGATGTGTCCTaGACATCTCTGCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSFRDVS*TSLLQL
Trigger: CAACTGAAGCAGAGATGTCCAGGACACATCTCGAAA...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACGCAGTTGGGCTTGTATaGGTTCAGACTCCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHAVGLV*VQTPVK
Trigger: TTTTACAGGAGTCTGAACCCATACAAGCCCAACTGC...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACCTCTGCAGGAACTCCTaGAAGTTGTATCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHLCRNS*KLYLFS
Trigger: AGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAG...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAAGGAGCAGGTTGCCATaGAAAGTCTTCCACCTATTG +
Preference number: 4 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSRSRLP*KVFHLL
Trigger: CAATAGGTGGAAGACTTTCCATGGCAACCTGCTCCT...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAACGTCATCCAGTTCCCTaGACAATCTATGTATCTCCA +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQRHPVP*TIYVSP
Trigger: TGGAGATACATAGATTGTCCAGGGAACTGGATGACG...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTACCTCATTGGAATCCTaGAAAAATGTCCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSTSLES*KNVRSF
Trigger: GAAGCTTCGGACATTTTTGCAGGATTCCAATGAGGT...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCACTGTTTGCTGTAACTaGTCAATGCGACTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PSLPRDLAMKPWFISGIATVCCN*SMRLLN
Trigger: GTTCAGCAGTCGCATTGAGCAGTTACAGCAAACAGT...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACGAGATGTGGGAAATCTaGAAACGCAGAATGATGACC +
Preference number: 4 (lower is better)
Translates to: WSLTPFPFCSEFKTSITNEMWEI*KRRMMT
Trigger: GGTCATCATTCTGCGTTTCCAGATTTCCCACATCTC...GTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAAGAGCCTTGTGGCTATaGATCTCATTCTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQRALWL*ISFSKF
Trigger: GAATTTGGAGAATGAGATCCATAGCCACAAGGCTCT...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGCCTGGTCTAACATCTaGTCTACGTCATTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTAWSNI*STSFKK
Trigger: CTTTTTAAATGACGTAGAGCAGATGTTAGACCAGGC...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp AGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCTCCATGATAGCCTCTaGACATTCTCCAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: RHSSTKVCLGLPQVTLTCLHDSL*TFSKSS
Trigger: TGAAGATTTGGAGAATGTGCAGAGGCTATCATGGAG...ACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CCA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCTGCTCCATTGTCTCCTaGACATCCTGTATTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITCSIVS*TSCISS
Trigger: AGAACTAATACAGGATGTCCAGGAGACAATGGAGCA...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR GCA 90 bp TTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACCCTGGTTCTTGAGCTaGAGTGACAAGTTTTTGATT +
Preference number: 4 (lower is better)
Translates to: LVFNSFPLLLRVQDQHHQPWFLS*SDKFLI
Trigger: AATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGG...TTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTGGCCCTGAGGAAGGCCAGGGCGTGGCTGTTGTTCTCCAGGAAGTaGACGCGCAGGCGGCCCGGACTGGGCGCTGGTAGGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LALRKARAWLLFSRK*TRRRPGLGAGRASP
Trigger: TGGGGAGGCCCTACCAGCGCCCAGTCCGGGCCGCCTGCGCGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCTCAGGGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTCCTCTAGCTCGCGCAGCTCCGCCGCGAAGGCGCGCACGTCTTaGTCCAGGCGCAGGTGTTGCAGCAACAGGGCCTCGGCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: CSSSSRSSAAKARTS*SRRRCCSNRASASA
Trigger: GGCAGACGCCGAGGCCCTGTTGCTGCAACACCTGCGCCTGGAGCAAGACGTGCGCGCCTTCGCGGCGGAGCTGCGCGAGCTAGAGGAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AGCTCCGCCGCGAAGGCGCGCACGTCTTGCTCCAGGCGCAGGTGTTaGAGCAACAGGGCCTCGGCGTCTGCCTGGTCCTTCCCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: SSAAKARTSCSRRRC*SNRASASAWSFPQD
Trigger: ATCCTGCGGGAAGGACCAGGCAGACGCCGAGGCCCTGTTGCTGCAACACCTGCGCCTGGAGCAAGACGTGCGCGCCTTCGCGGCGGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GCTCAGAAGCAGCTTCTCACCGCGTGCACGGAGGGCCTCTGCCCGTaGTCCCAGGGTGCTGCGGAGCCACCCCAAACCCTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AQKQLLTACTEGLCP*SQGAAEPPQTLVLL
Trigger: CAGCAGCACCAGGGTTTGGGGTGGCTCCGCAGCACCCTGGGATCACGGGCAGAGGCCCTCCGTGCACGCGGTGAGAAGCTGCTTCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGGGGCAGGATGGCAGCCTCCAGAACGCTCAGCCTCTGAGTGGCTaGCTCCACTGTGGCTGGGTCGGTGAGGGAGGCTCTGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LGQDGSLQNAQPLSG*LHCGWVGEGGSGLV
Trigger: GACCAGGCCAGAGCCTCCCTCACCGACCCAGCCACAGTGGAGGCAGCCACTCAGAGGCTGAGCGTTCTGGAGGCTGCCATCCTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GTTTGCAGCCGGGCGCGCCGCCTTGCGGCTCCAGCCCAGAGCAGCTaGCAGGTTCCCTGCACTGCTTCTGCCCTTTCCAGTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: VCSRARRLAAPAQSS*QVPCTASALSSGSG
Trigger: GCCAGATCCACTGGAAAGGGCAGAAGCAGTGCAGGGAACCTGGCAGCTGCTCTGGGCTGGAGCCGCAAGGCGGCGCGCCCGGCTGCAAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCGATGAAGGGAATGGGCACCTTGGCCCTGAGGAAGGCCAGGGCGTaGCTGTTGTTCTCCAGGAAGTGCACGCGCAGGCGGCCCGGACTG +
Preference number: 5 (lower is better)
Translates to: PMKGMGTLALRKARA*LLFSRKCTRRRPGL
Trigger: CAGTCCGGGCCGCCTGCGCGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCTCAGGGCCAAGGTGCCCATTCCCTTCATCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCAGCCTCTCTTCCCACAGGCAGGTCTCCTCCTGTAGGGTTCCATaGCTCCTCAGCGGCCGCAGGGCTGAAGCCTCAACCTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CSLSSHRQVSSCRVP*LLSGRRAEASTCRS
Trigger: GGAGCGGCAGGTTGAGGCTTCAGCCCTGCGGCCGCTGAGGAGGCATGGAACCCTACAGGAGGAGACCTGCCTGTGGGAAGAGAGGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CAGCTCCTCCAGCTGGTGTCCCCGGGCCCTCGCTTGCTCTGTGAGTaGCTCTGTCCTCAGGAGCAGGGCCTGGCATCTGTCCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: QLLQLVSPGPRLLCE*LCPQEQGLASVQDA
Trigger: AGCATCCTGGACAGATGCCAGGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ACGGCCAGCTTGGTGGTCAGCCAGGCATCCAGGAGCAAGGCCTCTTaGTCCAGCTGGTACAGGTGCAGCTGTTCACGCAGCGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: TASLVVSQASRSKAS*SSWYRCSCSRSASP
Trigger: GGGGGAGGCGCTGCGTGAACAGCTGCACCTGTACCAGCTGGAGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCTCTCTGCAGGCGCCTATGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLCRRLCCCCCCCCC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATAGGCGCCTGCAGAGAGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTGCCATCTCACCCAAGGCCTGGAAGCGCCCTTCCTGGGGCAGGATaGCAGCCTCCAGAACGCTCAGCCTCTGAGTGGCTGCCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LPSHPRPGSALPGAG*QPPERSASEWLPPL
Trigger: CAGTGGAGGCAGCCACTCAGAGGCTGAGCGTTCTGGAGGCTGCCATCCTGCCCCAGGAAGGGCGCTTCCAGGCCTTGGGTGAGATGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp ACTGTGCTCGCTGGAGGGTCTGCTCCAGCAGGGTACGTCGGGCTCTaGCAAGAGACACCAGGCTGTGGTGGAGCTCGGCCAGTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: TVLAGGSAPAGYVGL*QETPGCGGARPVLG
Trigger: CCCTAGCACTGGCCGAGCTCCACCACAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCTTCGGCCGAGTCAGAAAAGTACTGCCCAATTAGCAGTGCTGTTTaGAGCCGGGCGCGCCGCCTTGCGGCTCCAGCCCAGAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASAESEKYCPISSAV*SRARRLAAPAQSSC
Trigger: GCAGCTGCTCTGGGCTGGAGCCGCAAGGCGGCGCGCCCGGCTGCAAACAGCACTGCTAATTGGGCAGTACTTTTCTGACTCGGCCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCTCAGCGGCCGCAGGGCTGAAGCCTCAACCTGCCGCTCCTCTTTaGTGCACAGCTGAGCCTGGATGTCCTCTGCCCACAGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: SSAAAGLKPQPAAPL*CTAEPGCPLPTAAA
Trigger: AGCTGCTGCTGTGGGCAGAGGACATCCAGGCTCAGCTGTGCAGCAAAGAGGAGCGGCAGGTTGAGGCTTCAGCCCTGCGGCCGCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTCTGTGCGGCCTCTGTCTCTAAGCGGTTTAGAGCCACCTCCAGCTaGTGCACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: LCAASVSKRFRATSS*CTRAATSSVAKCPA
Trigger: GGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTGGAGGTGGCTCTAAACCGCTTAGAGACAGAGGCCGCACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTTTCTGCTCTCTGCAGCAGCCGTGCATGGGCCTCTCTCACAGCCTaGAGCTGGGCCAGCACCCTAGGACTGCCTGGGGTCTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: LSALCSSRAWASLTA*SWASTLGLPGVCPL
Trigger: GAGTGGACAGACCCCAGGCAGTCCTAGGGTGCTGGCCCAGCTGCAGGCTGTGAGAGAGGCCCATGCACGGCTGCTGCAGAGAGCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCAGAAGGGGCTGTGAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCCRRGCEGD
Trigger: GTCACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCAGAAGGGGCTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCCCRRGCEG
Trigger: ACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GAGCCTTCAGCTGCTGGCTGTGCTGGCCTAGGAGCCTTAGAGCGCTaGCCACCTCCTGGGACTGTGGAGAGTCTGAGACTGCCACCGGCT +
Preference number: 5 (lower is better)
Translates to: EPSAAGCAGLGALER*PPPGTVESLRLPPA
Trigger: AGCCGGTGGCAGTCTCAGACTCTCCACAGTCCCAGGAGGTGGCCAGCGCTCTAAGGCTCCTAGGCCAGCACAGCCAGCAGCTGAAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCTACGCGCCTCAGAGTGTCCACCCTGGTGCAGGCTGTGGGCTGTaGCCTCCAATGCACGGATCTTTTCGGCCTGGGCCTTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: CYAPQSVHPGAGCGL*PPMHGSFRPGPSGP
Trigger: AGGGCCTGAAGGCCCAGGCCGAAAAGATCCGTGCATTGGAGGCCACAGCCCACAGCCTGCACCAGGGTGGACACTCTGAGGCGCGTAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCCCTCGCTTGCTCTGTGAGTGCCTCTGTCCTCAGGAGCAGGGCCTaGCATCTGTCCAGGATGCTACGCGCCTCAGAGTGTCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: ALACSVSASVLRSRA*HLSRMLRASECPPW
Trigger: CCAGGGTGGACACTCTGAGGCGCGTAGCATCCTGGACAGATGCCAGGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCACTTCCTTGGCCTGCCTGTCCATGGCTGCTTCCAGCTCCTCCTaGGCTCCCAGGAGTTCGCCCACTCTAGGCAGCGCCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CTSLACLSMAASSSS*APRSSPTLGSAWLL
Trigger: CAGAAGCCAGGCGCTGCCTAGAGTGGGCGAACTCCTGGGAGCCCAGGAGGAGCTGGAAGCAGCCATGGACAGGCAGGCCAAGGAAGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAACTCTTGCACTTCCTaGGCCTGCCTGTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: CNNQDRLREAMHQAVQRRNSCTS*ACLSMA
Trigger: AGCCATGGACAGGCAGGCCAAGGAAGTGCAAGAGTT...CCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGTTCCTGAATCTCTaGCTCCAGCGCCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKAFLNL*LQRLML
Trigger: CAGCATGAGGCGCTGGAGCAAGAGATTCAGGAACGC...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CGCCCCGTGATCTCCTTCTGCCTGCGGGCCATATCCGCCCAGCTGTaGTACTCTTCCTGCCGGAGGATGTCTGCCATCTCACCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RPVISFCLRAISAQL*YSSCRRMSAISPKA
Trigger: GGCCTTGGGTGAGATGGCAGACATCCTCCGGCAGGAAGAGTATCACAGCTGGGCGGATATGGCCCGCAGGCAGAAGGAGATCACGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GCTGGACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTTGCTGCCCTaGCAAAGTTGCCTATCATCAGGGAGGTGTGCAGAGCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: AGPAAGSSPQPGLLP*QSCLSSGRCAEPGP
Trigger: GGGGCCAGGCTCTGCACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTCTTGCAACCAGGCCTCCTCCTCCTCACAGCTGCGCAGAAACTGTaGTCGCTGGAGGGTCTGCTCCAGCAGGGTACGTCGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LLQPGLLLLTAAQKL*SLEGLLQQGTSGSD
Trigger: GTCAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGGAGGCCTGGTTGCAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AAGTTGTATCTGTTCTCTAGGGCCTGGCCCTGCAGGGTCACTGCCTaGCTCAGCTTCTCCCAGAGGTCCCGCAGGGCCTCCAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KLYLFSRAWPCRVTA*LSFSQRSRRASSLW
Trigger: CCAGAGGCTGGAGGCCCTGCGGGACCTCTGGGAGAAGCTGAGGCAGGCAGTGACCCTGCAGGGCCAGGCCCTAGAGAACAGATACAACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AACAGCTGCTGCTCCAAGGCCTGCTGTAGCTGCTGTTGCCGGCCCTaGCAGGATTCCCGCAAGCTACTCAACCCCTGCTCTACAGCGGCC +
Preference number: 5 (lower is better)
Translates to: NSCCSKACCSCCCRP*QDSRKLLNPCSTAA
Trigger: GGCCGCTGTAGAGCAGGGGTTGAGTAGCTTGCGGGAATCCTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCAGCAGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGGCCCTGCAACTCTTGCACTTCCTTGGCCTGCCTGTCCATGGCTaGTTCCAGCTCCTCCTGGGCTCCCAGGAGTTCGCCCACTCTAGG +
Preference number: 5 (lower is better)
Translates to: LALQLLHFLGLPVHG*FQLLLGSQEFAHSR
Trigger: CCTAGAGTGGGCGAACTCCTGGGAGCCCAGGAGGAGCTGGAAGCAGCCATGGACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTTGGGACTGGCCCTaGAACTCTTGCACTTCCTTGGCCTGCCTGTCCATGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LARQWPSWRQAWDWP*NSCTSLACLSMAAS
Trigger: GGAAGCAGCCATGGACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CAGCTGCTGCACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTaGCTGTATGAGCTTGTGCCCTGTACCTGTCACCACCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: QLLHPGGHLFSGKVP*LYELVPCTCHHLAQ
Trigger: CTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ACCTCCAGCTGCTGCACCCGGGCGGCCACCTCTTCAGTGGCAAAGTaGCCTGCCTGTATGAGCTTGTGCCCTGTACCTGTCACCACCTGG +
Preference number: 5 (lower is better)
Translates to: TSSCCTRAATSSVAK*PACMSLCPVPVTTW
Trigger: CCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTGGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGTGCGGCCTCTGTCTCTAAGCGGTTTAGAGCCACCTCCAGCTGCTaGACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: CAASVSKRFRATSSC*TRAATSSVAKCPAC
Trigger: ACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTGGAGGTGGCTCTAAACCGCTTAGAGACAGAGGCCGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCTCCAGCAGGGTACGTCGGGCTCTGACAAGAGACACCAGGCTGTaGTGGAGCTCGGCCAGTGCTAGGGCTTTAGCCTGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: CSSRVRRALTRDTRL*WSSASARALACSTS
Trigger: GGAGGTGCTGCAGGCTAAAGCCCTAGCACTGGCCGAGCTCCACCACAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCCTGCTGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGGGCACTGTGCAGCAGCTCTCTGATCTTGCTCACGGCAGCTGGATaGCTCAGAAGCAGCTTCTCACCGCGTGCACGGAGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WALCSSSLILLTAAG*LRSSFSPRARRASA
Trigger: GGCAGAGGCCCTCCGTGCACGCGGTGAGAAGCTGCTTCTGAGCCATCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCACAGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCCCTGCTCTACAGCGGCCAGGGTCTGGTGAATCTCAGAGGCCTGTaGGTAGCCAGATGCAAGCAGCCGCTGCCCCATGCTTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: PLLYSGQGLVNLRGL*VARCKQPLPHALDQ
Trigger: CTGGTCCAAAGCATGGGGCAGCGGCTGCTTGCATCTGGCTACCCACAGGCCTCTGAGATTCACCAGACCCTGGCCGCTGTAGAGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCCAGGATGCTACGCGCCTCAGAGTGTCCACCCTGGTGCAGGCTGTaGGCTGTGGCCTCCAATGCACGGATCTTTTCGGCCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SRMLRASECPPWCRL*AVASNARIFSAWAF
Trigger: GAAGGCCCAGGCCGAAAAGATCCGTGCATTGGAGGCCACAGCCCACAGCCTGCACCAGGGTGGACACTCTGAGGCGCGTAGCATCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAAGGGAATGGGCACCTaGGCCCTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPKGMGT*ALRKAR
Trigger: CCTGGCCTTCCTCAGGGCCAAGGTGCCCATTCCCTT...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCCTGCTCACTCCTCTCTaGGACCCTGGTCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: GPEQPWGGYLWVSSRVVPLLTPL*DPGPLG
Trigger: GCCCAGTGGACCAGGGTCCAAGAGAGGAGTGAGCAG...GGGAACCACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CTGGGTGGTCTGGTGGACAAGATGAGTCACATGGGTCCTGTGGGCTaGCACCTGGGCCTCCAGCAGGTCATGGCTCTGCAGCAGCGACAC +
Preference number: 5 (lower is better)
Translates to: LGGLVDKMSHMGPVG*HLGLQQVMALQQRH
Trigger: GTGTCGCTGCTGCAGAGCCATGACCTGCTGGAGGCCCAGGTGTCAGCCCACAGGACCCATGTGACTCATCTTGTCCACCAGACCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GCACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTGCCTGTATaGGCTTGTGCCCTGTACCTGTCACCACCTGGCTCAGAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: APGRPPLQWQSALPV*ACALYLSPPGSEPC
Trigger: ACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCTCCTCCTCACAGCTGCGCAGAAACTGTGCTCGCTGGAGGGTCTaGTCCAGCAGGGTACGTCGGGCTCTGACAAGAGACACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSSQLRRNCARWRV*SSRVRRALTRDTRL
Trigger: CAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCCACAGTCTGGACCTGGATCTGCCGGGCCACCTGCCCTTGCGCTTaGTTTAGCAGTGACTGCAGCATCAGGACCTGCTCCCAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ATVWTWICRATCPCA*FSSDCSIRTCSQSS
Trigger: GCTGCTTTGGGAGCAGGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCAGACTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ACCCGAGCCACAGTCTGGACCTGGATCTGCCGGGCCACCTGCCCTTaGGCTTGCTTTAGCAGTGACTGCAGCATCAGGACCTGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TRATVWTWICRATCP*ACFSSDCSIRTCSQ
Trigger: TTGGGAGCAGGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCAGACTGTGGCTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CCCTCCCAAAACTTCTGCTGTCTCTGCTCCCACAGAGCCTTCAGCTaGTGGCTGTGCTGGCCTAGGAGCCTTAGAGCGCTGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PSQNFCCLCSHRAFS*WLCWPRSLRALATS
Trigger: GGAGGTGGCCAGCGCTCTAAGGCTCCTAGGCCAGCACAGCCAGCAGCTGAAGGCTCTGTGGGAGCAGAGACAGCAGAAGTTTTGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GTCTCTGCAGCCTCCGGCTGGAGCACAGGTCCTGCCCGGTTTCTGTaGTCTGCAGGGCTCCCTCCAGATGCTCCATTGTCTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: VSAASGWSTGPARFL*SAGLPPDAPLSPGH
Trigger: ATGTCCAGGAGACAATGGAGCATCTGGAGGGAGCCCTGCAGAGCACAGAAACCGGGCAGGACCTGTGCTCCAGCCGGAGGCTGCAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCACAGAGCCCAGAAACAGCTGCTGCTCCAAGGCCTGCTGTAGCTaGTGTTGCCGGCCCTGCCAGGATTCCCGCAAGCTACTCAACCCC +
Preference number: 5 (lower is better)
Translates to: STEPRNSCCSKACCS*CCRPCQDSRKLLNP
Trigger: GGGGTTGAGTAGCTTGCGGGAATCCTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGGCTCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGTCAAGCCAGCGTTCCGCCTTTTCCACAGAGCCCAGAAACAGCTaGTGCTCCAAGGCCTGCTGTAGCTGCTGTTGCCGGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LSSQRSAFSTEPRNS*CSKACCSCCCRPCQ
Trigger: CTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGGCTCTGTGGAAAAGGCGGAACGCTGGCTTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CAGTTGGTCTGCAGCTCATCCCAGAGGCCTCCTAATTCTTCCAGTTaGCCCCGGATGGTCTCTGAGGCCGGGTGGCCCCCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: QLVCSSSQRPPNSSS*PRMVSEAGWPPCSS
Trigger: GCTGCTACAAGGGGGCCACCCGGCCTCAGAGACCATCCGGGGGCAACTGGAAGAATTAGGAGGCCTCTGGGATGAGCTGCAGACCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGTAGCCGGCTGTCTTCCGCTGACACCAGACCAGCAGGGCTTCCTTaGCAGACAGCAAAGCCGCACTGGCCCCAAACTCCTCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: CSRLSSADTRPAGLP*QTAKPHWPQTPPCP
Trigger: TGGACAGGGAGGAGTTTGGGGCCAGTGCGGCTTTGCTGTCTGCCAAGGAAGCCCTGCTGGTCTGGTGTCAGCGGAAGACAGCCGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GGTAGGAATGGCCTTCGGTTTTGGGCTCGGAGTGTTGTCTGCAGCTaGAAGAGCAGGGCCTCTGTGGCTCCTCGCTGCTGCCACCGAGGT +
Preference number: 5 (lower is better)
Translates to: GRNGLRFWARSVVCS*KSRASVAPRCCHRG
Trigger: ACCTCGGTGGCAGCAGCGAGGAGCCACAGAGGCCCTGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAAACCGAAGGCCATTCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCTGCAGGGCCCAGGCCCTCTCGAGGTAGGAATGGCCTTCGGTTTTaGGCTCGGAGTGTTGTCTGCAGCTGGAAGAGCAGGGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SAGPRPSRGRNGLRF*ARSVVCSWKSRASV
Trigger: CACAGAGGCCCTGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAAACCGAAGGCCATTCCTACCTCGAGAGGGCCTGGGCCCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCCAGCAGGGTACGTCGGGCTCTGACAAGAGACACCAGGCTGTGGTaGAGCTCGGCCAGTGCTAGGGCTTTAGCCTGCAGCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: SSRVRRALTRDTRLW*SSASARALACSTST
Trigger: TGTGGAGGTGCTGCAGGCTAAAGCCCTAGCACTGGCCGAGCTCCACCACAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCCTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AACCAGGCCTCCTCCTCCTCACAGCTGCGCAGAAACTGTGCTCGCTaGAGGGTCTGCTCCAGCAGGGTACGTCGGGCTCTGACAAGAGAC +
Preference number: 5 (lower is better)
Translates to: NQASSSSQLRRNCAR*RVCSSRVRRALTRD
Trigger: GTCTCTTGTCAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGGAGGCCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTACTTTGGCCTCCAGGTaGGTCCAGGCCCCCTGCACC +
Preference number: 5 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRITLASR*VQAPCT
Trigger: GGTGCAGGGGGCCTGGACCAACCTGGAGGCCAAAGT...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp ACACTGGTACCCTGGGAGTCTAGCTGGGTGGTCTGGTGGACAAGATaGGTCACATGGGTCCTGTGGGCTGACACCTGGGCCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TLVPWESSWVVWWTR*VTWVLWADTWASSR
Trigger: CCTGCTGGAGGCCCAGGTGTCAGCCCACAGGACCCATGTGACTCATCTTGTCCACCAGACCACCCAGCTAGACTCCCAGGGTACCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CTCACCGCTGTGTGGAACCGGACCAGGAGATATCCTCGTTCCAATTaGGCCTTGCGCTGCTCCATGCGCAGCTGGAGGGCCTCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: LTAVWNRTRRYPRSN*ALRCSMRSWRASQA
Trigger: AGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGTTCCACACAGCGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCTGCCACATCCTCAGGGTCGAGCAGCTGGGCAATGCCAAGCTGCTaGTCAGCCACTCGGAAGGCAAAGGAGAGGTTATACAGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: AATSSGSSSWAMPSC*SATRKAKERLYRGR
Trigger: CCGCCCTCTGTATAACCTCTCCTTTGCCTTCCGAGTGGCTGAGCAGCAGCTTGGCATTGCCCAGCTGCTCGACCCTGAGGATGTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCTCGAGGTAGGAATGGCCTTCGGTTTTGGGCTCGGAGTGTTGTCTaGAGCTGGAAGAGCAGGGCCTCTGTGGCTCCTCGCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SRGRNGLRFWARSVV*SWKSRASVAPRCCH
Trigger: GTGGCAGCAGCGAGGAGCCACAGAGGCCCTGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAAACCGAAGGCCATTCCTACCTCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTCACTCCTCTCTTGGACCCTGGTCCACTGGGCCTGGGCACTGTaGAGCAGCTCTCTGATCTTGCTCACGGCAGCTGGATGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: CSLLSWTLVHWAWAL*SSSLILLTAAGWLR
Trigger: TCTGAGCCATCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCACAGTGCCCAGGCCCAGTGGACCAGGGTCCAAGAGAGGAGTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCAAGCCAGCGTTCCGCCTTTTCCACAGAGCCCAGAAACAGCTGCTaGTCCAAGGCCTGCTGTAGCTGCTGTTGCCGGCCCTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SSQRSAFSTEPRNSC*SKACCSCCCRPCQD
Trigger: ATCCTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGGCTCTGTGGAAAAGGCGGAACGCTGGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGAGAAGGGGCTGTGAAGGTGACAGGCTGTGGACTTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*RRGCEGDRLWTWNA
Trigger: AGCATTCCAAGTCCACAGCCTGTCACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCAGAAGGGGCTGTGAAGGTGACAGGCTGTGGACTTGGAAT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CRRGCEGDRLWTWN
Trigger: ATTCCAAGTCCACAGCCTGTCACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TTTCCCGGGCACGGAAGGAGGCAAAGGCTGCCAGTAGCTGGCGCATaGCAGGCAGTGAGTCTGGGAAGTCCCGAGCTTCTAGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: FPGHGRRQRLPVAGA*QAVSLGSPELLAAS
Trigger: AGATGCAGCTAGAAGCTCGGGACTTCCCAGACTCACTGCCTGCCATGCGCCAGCTACTGGCAGCCTTTGCCTCCTTCCGTGCCCGGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCCCAAAACTTCTGCTGTCTCTGCTCCCACAGAGCCTTCAGCTGCTaGCTGTGCTGGCCTAGGAGCCTTAGAGCGCTGGCCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SQNFCCLCSHRAFSC*LCWPRSLRALATSW
Trigger: CCAGGAGGTGGCCAGCGCTCTAAGGCTCCTAGGCCAGCACAGCCAGCAGCTGAAGGCTCTGTGGGAGCAGAGACAGCAGAAGTTTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ACCCTTCTCTGCTCACTCCTCTCTTGGACCCTGGTCCACTGGGCCTaGGCACTGTGCAGCAGCTCTCTGATCTTGCTCACGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TLLCSLLSWTLVHWA*ALCSSSLILLTAAG
Trigger: TCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCACAGTGCCCAGGCCCAGTGGACCAGGGTCCAAGAGAGGAGTGAGCAGAGAAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ACATCTTTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTTGGGACTaGCCCTGCAACTCTTGCACTTCCTTGGCCTGCCTGTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: TSLARQWPSWRQAWD*PCNSCTSLACLSMA
Trigger: AGCCATGGACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCTTCCACATCTTTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTTaGGACTGGCCCTGCAACTCTTGCACTTCCTTGGCCTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSTSLARQWPSWRQA*DWPCNSCTSLACLS
Trigger: GGACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGATGTGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCTGAAACCTCTGAAGCAGCTGCCGGGCTTGCTCTTCCACATCTTTaGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTTGGGACTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SETSEAAAGLALPHL*RGSGLPGGRLGTGP
Trigger: AGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGATGTGGAAGAGCAAGCCCGGCAGCTGCTTCAGAGGTTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCCCACGCTAGCAATTCCCGGCAGCTCCCAAGAAAGGTGTGGCCCTaGGTAGCCTGCAACAGCTTCTGGCTCCATTCCTGGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: AHASNSRQLPRKVWP*VACNSFWLHSWTLA
Trigger: GGCCAAAGTCCAGGAATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCTTGGGAGCTGCCGGGAATTGCTAGCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCACTCCAGGCGCAGGTGTaGCAGCAACAGGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLALQAQV*QQQGLG
Trigger: GCCGAGGCCCTGTTGCTGCAACACCTGCGCCTGGAG...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AGGGCTGCCACATCCTCAGGGTCGAGCAGCTGGGCAATGCCAAGCTaGTGCTCAGCCACTCGGAAGGCAAAGGAGAGGTTATACAGAGGG +
Preference number: 5 (lower is better)
Translates to: RAATSSGSSSWAMPS*CSATRKAKERLYRG
Trigger: CCCTCTGTATAACCTCTCCTTTGCCTTCCGAGTGGCTGAGCAGCAGCTTGGCATTGCCCAGCTGCTCGACCCTGAGGATGTGGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGGGCCTCCAGCAGGTCATGGCTCTGCAGCAGCGACACTATTTCTaGCAGCTGTTGCCCATAGACTGTGGAGCTGGCCAACACCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGLQQVMALQQRHYF*QLLPIDCGAGQHLQ
Trigger: CTGCAGGTGTTGGCCAGCTCCACAGTCTATGGGCAACAGCTGGCAGAAATAGTGTCGCTGCTGCAGAGCCATGACCTGCTGGAGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTAGCTGTCTGTGCTCTTGCAACCAGGCCTCCTCCTCCTCACAGCTaGGCAGAAACTGTGCTCGCTGGAGGGTCTGCTCCAGCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: LAVCALATRPPPPHS*AETVLAGGSAPAGY
Trigger: GTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGGAGGCCTGGTTGCAAGAGCACAGACAGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTTGGTGTAGGAGAGACAAGTCTGGATCCTTTCCATGTCCCCGTGTaGACCATGTGTGACACTAGGGCTGCGGCAGCCCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FGVGETSLDPFHVPV*TMCDTRAAAARACS
Trigger: GGAGCAGGCGCGGGCTGCCGCAGCCCTAGTGTCACACATGGTGCACACGGGGACATGGAAAGGATCCAGACTTGTCTCTCCTACACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ACCTGCCCTTGCGCTTGCTTTAGCAGTGACTGCAGCATCAGGACCTaGTCCCAAAGCAGCCTGCTCTCTGGGGAGCCTGACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: TCPCACFSSDCSIRT*SQSSLLSGEPDSIT
Trigger: GGTGATGGAGTCAGGCTCCCCAGAGAGCAGGCTGCTTTGGGAGCAGGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTCCATTCCTGCAATTGGAGGGAAGCCAGCAGCTGGACCCTTCTCTaGTCACTCCTCTCTTGGACCCTGGTCCACTGGGCCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: FHSCNWREASSWTLL*SLLSWTLVHWAWAL
Trigger: CAGTGCCCAGGCCCAGTGGACCAGGGTCCAAGAGAGGAGTGAGCAGAGAAGGGTCCAGCTGCTGGCTTCCCTCCAATTGCAGGAATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AGCTCCTGCACTCTGCCTCCAGCCTTCATCAGTTCCTGCACCTGCTaGTCCATGCCTGCCAACTCGCGTTCCAGCCTCTCATGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSCTLPPAFISSCTC*SMPANSRSSLSCLW
Trigger: CCAGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCATGGAGCAGCAGGTGCAGGAACTGATGAAGGCTGGAGGCAGAGTGCAGGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GGACCAGGAGATATCCTCGTTCCAATTGAGCCTTGCGCTGCTCCATaGGCAGCTGGAGGGCCTCCCAAGCTTGGGTCACAGCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GPGDILVPIEPCAAP*AAGGPPKLGSQLAA
Trigger: AGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGTGTGGAACCGGACCAGGAGATATCCTCGTTCCAATTGAGCCTTaGGCTGCTCCATGCGCAGCTGGAGGGCCTCCCAAGCTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LCGTGPGDILVPIEP*AAPCAAGGPPKLGS
Trigger: TGACCCAAGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGTTCCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CAGTTGCTGGACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTTGCTaGCCTGACAAAGTTGCCTATCATCAGGGAGGTGTGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: QLLDPLLDPVLSLGC*PDKVAYHQGGVQSL
Trigger: CAGGCTCTGCACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTCAGCCACTCGGAAGGCAAAGGAGAGGTTATACAGAGGGCGGTCTaGACTCAGCGAGCCATAATCCAGCAGGTCCGGCCTGTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LSHSEGKGEVIQRAV*TQRAIIQQVRPVSV
Trigger: CACGCTCACAGGCCGGACCTGCTGGATTATGGCTCGCTGAGTCCAGACCGCCCTCTGTATAACCTCTCCTTTGCCTTCCGAGTGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CAGGCTCTCAGTTGCTGGACCCGCTGCTGGATCCAGTCCTCAGCCTaGGTTGCTGCCCTGACAAAGTTGCCTATCATCAGGGAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: QALSCWTRCWIQSSA*VAALTKLPIIREVC
Trigger: GCACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTGAGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCAGGCTGTGGGCTGTGGCCTCCAATGCACGGATCTTTTCGGCCTaGGCCTTCAGGCCCTGCTCATGCCTCTTGAGCTTTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: CRLWAVASNARIFSA*AFRPCSCLLSFDRR
Trigger: CCTTCTGTCAAAGCTCAAGAGGCATGAGCAGGGCCTGAAGGCCCAGGCCGAAAAGATCCGTGCATTGGAGGCCACAGCCCACAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TTGGAATCCTGCAAAAATGTCCGAAGCTTCCGCAGCTCCTCCAGCTaGTGTCCCCGGGCCCTCGCTTGCTCTGTGAGTGCCTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LESCKNVRSFRSSSS*CPRALACSVSASVL
Trigger: GAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTGCGGAAGCTTCGGACATTTTTGCAGGATTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TTCTGCTGCTTCTGCAACTGTGTTTGCATCGTGGCTGGGTCCTGCTaGCCCTCATCCAGAGCCGCCAGGCTCTTCTCCCTCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: FCCFCNCVCIVAGSC*PSSRAARLFSLSHA
Trigger: TGCATGGCTGAGGGAGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCAAGTCTCTTGTGGTGGCCTCTAGGCACCGCAGAAGAGCCTGTGTaGCCTCAGCGTCCTGGCCCAGGTCCTCACTGTCCAGAATATGGT +
Preference number: 5 (lower is better)
Translates to: PSLLWWPLGTAEEPV*PQRPGPGPHCPEYG
Trigger: ACCATATTCTGGACAGTGAGGACCTGGGCCAGGACGCTGAGGCCACACAGGCTCTTCTGCGGTGCCTAGAGGCCACCACAAGAGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTAGATCCTGTCCATAGTCCTGAGACTCAGCGACGGCCAGCTTGGTaGTCAGCCAGGCATCCAGGAGCAAGGCCTCTTGCTCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LDPVHSPETQRRPAW*SARHPGARPLAPAG
Trigger: ACCAGCTGGAGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTCGCTGAGTCTCAGGACTATGGACAGGATCTAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTGCTAGATCCTGTCCATAGTCCTGAGACTCAGCGACGGCCAGCTTaGTGGTCAGCCAGGCATCCAGGAGCAAGGCCTCTTGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLDPVHSPETQRRPA*WSARHPGARPLAPA
Trigger: AGCTGGAGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTCGCTGAGTCTCAGGACTATGGACAGGATCTAGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ACAGGAAGTGGCCGTTGTCCAGCAGCTGCTGCCCTTCGTGCCGTATaGTCTGGGCTTGAAGGCAGCGTTCCTGAATCTCTTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: TGSGRCPAAAALRAV*SGLEGSVPESLAPA
Trigger: CGCTGGAGCAAGAGATTCAGGAACGCTGCCTTCAAGCCCAGACCATACGGCACGAAGGGCAGCAGCTGCTGGACAACGGCCACTTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGGCGACACTTCTGAGCTaGAATCTGGGGGTAGAACCT +
Preference number: 5 (lower is better)
Translates to: RPCTRPCSGGESANSLGRATLLS*NLGVEP
Trigger: AGGTTCTACCCCCAGATTCAAGCTCAGAAGTGTCGC...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCAGGTCTGTTCCCAGCGTaGTCCACGCAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAGLFPA*STQGPG
Trigger: GCCTGGGCCCTGCGTGGACAACGCTGGGAACAGACC...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCTCCCATGGCTGCTGGTaGGGAAGCTGGTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGSHGCW*GSWFWA
Trigger: AGCCCAGAACCAGCTTCCCAACCAGCAGCCATGGGA...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GAACGCTCAGCCTCTGAGTGGCTGCCTCCACTGTGGCTGGGTCGGTaGGGGAGGCTCTGGCCTGGTCTAACATCTGCTCTACGTCATTTA +
Preference number: 5 (lower is better)
Translates to: ERSASEWLPPLWLGR*GRLWPGLTSALRHL
Trigger: TAAATGACGTAGAGCAGATGTTAGACCAGGCCAGAGCCTCCCTCACCGACCCAGCCACAGTGGAGGCAGCCACTCAGAGGCTGAGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CCTGCAGTTGCTGGTGTTGGGTGGCTAGCTTGCTCTGCAGGGACTTaGACCTCTGGTGACACTTCTGGCTCTCCTCCAGGATGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PAVAGVGWLACSAGT*TSGDTSGSPPGWSR
Trigger: CCTGGACCATCCTGGAGGAGAGCCAGAAGTGTCACCAGAGGTTCAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CCTCCAGCCTCTGGGAGACCTCTCCAGCTTGAGGGTGGCTCTGACTaGGGAGCTCTTCGCCTTGCTTGGCAACAGAGGTCAAGATCTGCT +
Preference number: 5 (lower is better)
Translates to: PPASGRPLQLEGGSD*GALRLAWQQRSRSA
Trigger: AGCAGATCTTGACCTCTGTTGCCAAGCAAGGCGAAGAGCTCCTCAGTCAGAGCCACCCTCAAGCTGGAGAGGTCTCCCAGAGGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGAGACAGGTAGGTCATGATGGAGCACTCATCTGGATGCAGGGCTaGCACATCCTCAGGGTCGAGCAGCTGGGCAATGCCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LRQVGHDGALIWMQG*HILRVEQLGNAKLL
Trigger: CAGCAGCTTGGCATTGCCCAGCTGCTCGACCCTGAGGATGTGGCAGCCCTGCATCCAGATGAGTGCTCCATCATGACCTACCTGTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCGTCTGCCTGGTCCTTCCCGCAGGATGCGCTCTCTAGTTGTTTCTaGCGCTGGAAAAGCCAGGAAGCTGCTTCGGCCGAGTCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: ASAWSFPQDALSSCF*RWKSQEAASAESEK
Trigger: CTTTTCTGACTCGGCCGAAGCAGCTTCCTGGCTTTTCCAGCGGCAGAAACAACTAGAGAGCGCATCCTGCGGGAAGGACCAGGCAGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCTTCTCTCATGAACTCATGTAGTCTCAGGGTCCCCTCCAGCTCCTaGCCCCGTTCGTCTGCCAGCTTCCGTAGTGCCTGCAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: ASLMNSCSLRVPSSS*PRSSASFRSACNFS
Trigger: GGAGAAGTTGCAGGCACTACGGAAGCTGGCAGACGAACGGGGGCAGGAGCTGGAGGGGACCCTGAGACTACATGAGTTCATGAGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCTGCCTCCAGCCTTCATCAGTTCCTGCACCTGCTGCTCCATGCCTaGCAACTCGCGTTCCAGCCTCTCATGTCTCTGGAGCTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: SASSLHQFLHLLLHA*QLAFQPLMSLELVL
Trigger: GAGAACCAGCTCCAGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCATGGAGCAGCAGGTGCAGGAACTGATGAAGGCTGGAGGCAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GTTGCCTATCATCAGGGAGGTGTGCAGAGCCTGGCCCCGGCTCTCTaGCAGTTCCTTCACTTGAGCCCGGTGCTCCAACATGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: VAYHQGGVQSLAPAL*QFLHLSPVLQHVAK
Trigger: TTTTGCCACATGTTGGAGCACCGGGCTCAAGTGAAGGAACTGGCAGAGAGCCGGGGCCAGGCTCTGCACACCTCCCTGATGATAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCTCAGTTGCTGGACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTTaGTGCCCTGACAAAGTTGCCTATCATCAGGGAGGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SQLLDPLLDPVLSLG*CPDKVAYHQGGVQS
Trigger: GCTCTGCACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AGCAATTCCCGGCAGCTCCCAAGAAAGGTGTGGCCCTGGGTAGCCTaGAACAGCTTCTGGCTCCATTCCTGGACTTTGGCCTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SNSRQLPRKVWPWVA*NSFWLHSWTLASRL
Trigger: CAACCTGGAGGCCAAAGTCCAGGAATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCTTGGGAGCTGCCGGGAATTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCTGCTCCATGCCTGCCAACTCGCGTTCCAGCCTCTCATGTCTCTaGAGCTGGTTCTCTACCCCACACAGGTCCTGGGCCACATCGTTA +
Preference number: 5 (lower is better)
Translates to: CCSMPANSRSSLSCL*SWFSTPHRSWATSL
Trigger: TAACGATGTGGCCCAGGACCTGTGTGGGGTAGAGAACCAGCTCCAGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCATGGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ACTCTCTGCAGGAACTCCTGGAAGTTGTATCTGTTCTCTAGGGCCTaGCCCTGCAGGGTCACTGCCTGCCTCAGCTTCTCCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TLCRNSWKLYLFSRA*PCRVTACLSFSQRS
Trigger: GGACCTCTGGGAGAAGCTGAGGCAGGCAGTGACCCTGCAGGGCCAGGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AGCCTGGAAATTCTGCTGCTTCTGCAACTGTGTTTGCATCGTGGCTaGGTCCTGCTGGCCCTCATCCAGAGCCGCCAGGCTCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: SLEILLLLQLCLHRG*VLLALIQSRQALLP
Trigger: AGGGAGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCTCAGCCTGGAAATTCTGCTGCTTCTGCAACTGTGTTTGCATCGTaGCTGGGTCCTGCTGGCCCTCATCCAGAGCCGCCAGGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AQPGNSAASATVFAS*LGPAGPHPEPPGSS
Trigger: AGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTTCCAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTCATATCTGAGAATGGGCTCGAGGCTCCCCTTGCCAAGATCCCATaGCTGCTGGTTGGGAAGCTGGTTCTGGGCTGCCTCCCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LISENGLEAPLAKIP*LLVGKLVLGCLPSV
Trigger: CACAGAAGGGAGGCAGCCCAGAACCAGCTTCCCAACCAGCAGCCATGGGATCTTGGCAAGGGGAGCCTCGAGCCCATTCTCAGATATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGTATTTCTGCCAGCTGTaGCCCATAGACTGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: RPCTRPCSGGESANSLGRYFCQL*PIDCGA
Trigger: AGCTCCACAGTCTATGGGCAACAGCTGGCAGAAATA...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGAGTTGTTCAGCAGTGTaGATGGCCTCTGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVSCSAV*MASAQW
Trigger: CCACTGGGCAGAGGCCATCAACACTGCTGAACAACT...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAATGCAGTGACAAGTTTTaGATTCCCTTGATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKCSDKF*IPLMWA
Trigger: TGCCCACATCAAGGGAATCAAAAACTTGTCACTGCA...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTAGCCCCGAGGATTCTCCACTTCTGGGCTTaGCTCCAGACCTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GSVVEWFPGVSPLVAPRILHFWA*LQTFHQ
Trigger: CTGGTGGAAGGTCTGGAGCAAAGCCCAGAAGTGGAG...AATCCTCGGGGCTACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GGTTGTCCAGCTGCAGTAAGGCCTCATGGCTGGCACAGGTGGCCATaGAATCATCTACTTCTTGGCCAAACCCCTGCAGCTCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: GCPAAVRPHGWHRWP*NHLLLGQTPAAPAP
Trigger: AGGGGCTGGAGCTGCAGGGGTTTGGCCAAGAAGTAGATGATTTCATGGCCACCTGTGCCAGCCATGAGGCCTTACTGCAGCTGGACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CACAGGGTAGTGCTGGCCGAGCCGATGGGCCTCCATCTGCACTCTTaGCACCTCTTTTTCAATAGCCCTCAGTTCTCTCTGCAGGCGCCT +
Preference number: 5 (lower is better)
Translates to: HRVVLAEPMGLHLHS*HLFFNSPQFSLQAP
Trigger: AGGCGCCTGCAGAGAGAACTGAGGGCTATTGAAAAAGAGGTGTCAAGAGTGCAGATGGAGGCCCATCGGCTCGGCCAGCACTACCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCAGCCACCAGTTGCTTGTATTGTGCCTGCAATACCTCCGTCTCCTaGAGCTGCAGCAGGATCTTAGCCAGTCTCCTCTGGGCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: SATSCLYCACNTSVS*SCSRILASLLWAVC
Trigger: GCACACGGCCCAGAGGAGACTGGCTAAGATCCTGCTGCAGCTGCAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACTGGTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGGCGCATGGCAGGCAGTGAGTCTGGGAAGTCCCGAGCTTCTAGCTaGATCTTCTTCTCCTCAATCCAGCAGAGCAGGTCAGCCACCAGT +
Preference number: 5 (lower is better)
Translates to: WRMAGSESGKSRASS*IFFSSIQQSRSATS
Trigger: ACTGGTGGCTGACCTGCTCTGCTGGATTGAGGAGAAGAAGATGCAGCTAGAAGCTCGGGACTTCCCAGACTCACTGCCTGCCATGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ACAGTGACAGCCTGTTGCAGGCAGTGTGCACGTTCTTCACACGCCTaGTCCAGTCCTGCCCAGTGGCTTTCTAGCTTCTGGCACTGTTCC +
Preference number: 5 (lower is better)
Translates to: TVTACCRQCARSSHA*SSPAQWLSSFWHCS
Trigger: GGAACAGTGCCAGAAGCTAGAAAGCCACTGGGCAGGACTGGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTTAGATTCCCAAGAGGGCTCCAGGCTCTCAGTTGCTGGACCCGCTaGTGGATCCAGTCCTCAGCCTGGGTTGCTGCCCTGACAAAGTTG +
Preference number: 5 (lower is better)
Translates to: FRFPRGLQALSCWTR*WIQSSAWVAALTKL
Trigger: CAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTGAGAGCCTGGAGCCCTCTTGGGAATCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCAATGCACGGATCTTTTCGGCCTGGGCCTTCAGGCCCTGCTCATaGCTCTTGAGCTTTGACAGAAGGGTCTCCACAGTGACCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SNARIFSAWAFRPCS*LLSFDRRVSTVTKG
Trigger: CCCCTTGGTCACTGTGGAGACCCTTCTGTCAAAGCTCAAGAGGCATGAGCAGGGCCTGAAGGCCCAGGCCGAAAAGATCCGTGCATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AAATTCTGCTGCTTCTGCAACTGTGTTTGCATCGTGGCTGGGTCCTaGTGGCCCTCATCCAGAGCCGCCAGGCTCTTCTCCCTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: KFCCFCNCVCIVAGS*WPSSRAARLFSLSH
Trigger: ATGGCTGAGGGAGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TACCTGAAGCTCCTGCAGATGTCTTTCCAGCTCCTGCATACACTCTaGCACCTCTGGGGACAGGAAGTGGCCGTTGTCCAGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YLKLLQMSFQLLHTL*HLWGQEVAVVQQLL
Trigger: CAGCAGCTGCTGGACAACGGCCACTTCCTGTCCCCAGAGGTGGCAGAGTGTATGCAGGAGCTGGAAAGACATCTGCAGGAGCTTCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GTGGCTGCCTCCACTGTGGCTGGGTCGGTGAGGGAGGCTCTGGCCTaGTCTAACATCTGCTCTACGTCATTTAAAAAGCTTTCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: VAASTVAGSVREALA*SNICSTSFKKLSRW
Trigger: CCACCGGGAAAGCTTTTTAAATGACGTAGAGCAGATGTTAGACCAGGCCAGAGCCTCCCTCACCGACCCAGCCACAGTGGAGGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GTGATTTCGGCGTCATTGAGCAGACGGCTTCGGGCCTGGGTCAACTaGCACAGTTCAGACCAGGAAGCCTGTATATCCTGCTGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VISASLSRRLRAWVN*HSSDQEACISCCLW
Trigger: CCAGAGGCAGCAGGATATACAGGCTTCCTGGTCTGAACTGTGCCAGTTGACCCAGGCCCGAAGCCGTCTGCTCAATGACGCCGAAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AGATGCAGGACCTTGAGGGCCCCCTGTAGTCTGGCCATCTTCCTCTaGCAGTTGGTCTGCAGCTCATCCCAGAGGCCTCCTAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: RCRTLRAPCSLAIFL*QLVCSSSQRPPNSS
Trigger: GGAAGAATTAGGAGGCCTCTGGGATGAGCTGCAGACCAACTGCCAGAGGAAGATGGCCAGACTACAGGGGGCCCTCAAGGTCCTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCCATCCGCTCCCTCAGGGTCTGCATCTTGGCCTGGCCCAGGCTCTaGACTTCTCTGTTGAAAGCACCAAACATGTCTTCCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: AIRSLRVCILAWPRL*TSLLKAPNMSSSTL
Trigger: CAAGGTGCTGGAAGACATGTTTGGTGCTTTCAACAGAGAAGTCCAGAGCCTGGGCCAGGCCAAGATGCAGACCCTGAGGGAGCGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCTGCTGCTGCTGCTGCAGAAGGGGCTGTGAAGGTGACAGGCTGTaGACTTGGAATGCTTCCTCCAGCAGGGTGGTCTTCTCCTGTATC +
Preference number: 5 (lower is better)
Translates to: CCCCCCRRGCEGDRL*TWNASSSRVVFSCI
Trigger: GATACAGGAGAAGACCACCCTGCTGGAGGAAGCATTCCAAGTCCACAGCCTGTCACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGCGCAAACAGTTTAGGCCGGACATCTCTGCTTCAGTaGTTCAGCAGTGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: RPCTRPCSGGESANSLGRTSLLQ*FSSVDG
Trigger: GCCATCAACACTGCTGAACAACTGAAGCAGAGATGT...CCGGCCTAAACTGTTTGCGCTTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCCGTGCAGCGGCGGAGAAAGTTATTTTGCGCCACTaGAGTTTCTGCAGAATGTTG +
Preference number: 5 (lower is better)
Translates to: QPGSAAGGHAPGRAAAEKVILRH*SFCRML
Trigger: CAACATTCTGCAGAAACTCAAGTGGCGCAAAATAAC...TTTCTCCGCCGCTGCACGGCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAGAGGGCCTCCCAAGCTaGGGTCACAGCTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: AWTFRSCHRLPSLPRDLAEGLPS*GHSLLL
Trigger: AAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTC...TGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CACACTGGTCCTGAGCAGCCCTGGGGAGGGTACCTTTGGGTCAGTAGTCGAGTGAGCTCTTCGCCTTGCTaGGCAACAGAGGTCAAGATC +
Preference number: 5 (lower is better)
Translates to: HTGPEQPWGGYLWVSSRVSSSPC*ATEVKI
Trigger: GATCTTGACCTCTGTTGCCAAGCAAGGCGAAGAGCT...CACTCGACTACTGACCCAAAGGTACCCTCCCCAGGGCTGCTCAGGACCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTCTCAGGGTCTGCATCTaGGCCTGGCCCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGLRVCI*AWPRLW
Trigger: CCAGAGCCTGGGCCAGGCCAAGATGCAGACCCTGAG...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATCAGGCCCCCTGCACCTaGGTGAGCCACTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHQAPCT*VSHSLR
Trigger: TCTTAGTGAGTGGCTCACCAAGGTGCAGGGGGCCTG...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGTGCTCAAGGAACTGCTaGGCCCCCACCACATCCCCA +
Preference number: 5 (lower is better)
Translates to: ATSVACPLTGAVFCTLVLCSRNC*APTTSP
Trigger: TGGGGATGTGGTGGGGGCCAAGCAGTTCCTTGAGCA...CAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp TGGCTCTCCTCCAGGATGGTCCAGGAAGTGAATGCATTGTGGGTCTaGGAGATGAGGGCATCCATCTTGCTGGCCAGTGCCTGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: WLSSRMVQEVNALWV*EMRASILLASAWLL
Trigger: CAAGAGCCAGGCACTGGCCAGCAAGATGGATGCCCTCATCTCTCAGACCCACAATGCATTCACTTCCTGGACCATCCTGGAGGAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GCCACTTCTCCAGTTCCTTCAGCATTCTCTGCAGATGCAGGACCTTaGGGGCCCCCTGTAGTCTGGCCATCTTCCTCTGGCAGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: ATSPVPSAFSADAGP*GPPVVWPSSSGSWS
Trigger: AGACCAACTGCCAGAGGAAGATGGCCAGACTACAGGGGGCCCTCAAGGTCCTGCATCTGCAGAGAATGCTGAAGGAACTGGAGAAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GTTCAGAAAGTACTGCTGGACAGTGACAGCCTGTTGCAGGCAGTGTaGACGTTCTTCACACGCCTGCTCCAGTCCTGCCCAGTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: VQKVLLDSDSLLQAV*TFFTRLLQSCPVAF
Trigger: GAAAGCCACTGGGCAGGACTGGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGCTGGCCCTCATCCAGAGCCGCCAGGCTCTTCTCCCTCAGCCATaGAGTTACCTCATTGGAATCCTGCAAAAATGTCCGAAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LLALIQSRQALLPQP*SYLIGILQKCPKLP
Trigger: CGGAAGCTTCGGACATTTTTGCAGGATTCCAATGAGGTAACTGCATGGCTGAGGGAGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCTGGTAGGGCCTCCCCAGAGATAAGCTCCAATAGCCGCAGTAGGTaGGCACCGTCAGCAAACTCTGTGTACAGGTTCTGGATCCTGATG +
Preference number: 5 (lower is better)
Translates to: AGRASPEISSNSRSR*APSANSVYRFWILM
Trigger: CATCAGGATCCAGAACCTGTACACAGAGTTTGCTGACGGTGCCCACCTACTGCGGCTATTGGAGCTTATCTCTGGGGAGGCCCTACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AGCAAAGCCGCACTGGCCCCAAACTCCTCCCTGTCCAAGGAGATGTaGGAAATCTGGAAACGCAGAATGATGACCCAGAGGAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SKAALAPNSSLSKEM*EIWKRRMMTQRSPR
Trigger: CCTGGGACTCCTCTGGGTCATCATTCTGCGTTTCCAGATTTCCCACATCTCCTTGGACAGGGAGGAGTTTGGGGCCAGTGCGGCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCCTGGATCCAGGTCTCTGCTAGGTCCACTCTCTGCAGGAACTCCTaGAAGTTGTATCTGTTCTCTAGGGCCTGGCCCTGCAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: SWIQVSARSTLCRNS*KLYLFSRAWPCRVT
Trigger: AGTGACCCTGCAGGGCCAGGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAGAGTGGACCTAGCAGAGACCTGGATCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCAGAGCCGCCAGGCTCTTCTCCCTCAGCCATGCAGTTACCTCATTaGAATCCTGCAAAAATGTCCGAAGCTTCCGCAGCTCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PEPPGSSPSAMQLPH*NPAKMSEASAAPPA
Trigger: AGCTGGAGGAGCTGCGGAAGCTTCGGACATTTTTGCAGGATTCCAATGAGGTAACTGCATGGCTGAGGGAGAAGAGCCTGGCGGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGCTGCTGCTGCAGAAGGGGCTGTGAAGGTGACAGGCTGTGGACTTaGAATGCTTCCTCCAGCAGGGTGGTCTTCTCCTGTATCCATCTC +
Preference number: 5 (lower is better)
Translates to: CCCCRRGCEGDRLWT*NASSSRVVFSCIHL
Trigger: GAGATGGATACAGGAGAAGACCACCCTGCTGGAGGAAGCATTCCAAGTCCACAGCCTGTCACCTTCACAGCCCCTTCTGCAGCAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGCCAGGGCGTGGCTGTaGTTCTCCAGGAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: ETLMSRHSSTKVCLGLPQARAWL*FSRKCT
Trigger: CGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGC...TTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGCTGGCCCTGCAACTCTaGCACTTCCTTGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQLALQL*HFLGLP
Trigger: AGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAG...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTTTCCTGGAGGCAGGCTaGGGACTGGCCCTGCAACTC +
Preference number: 5 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGFLEAG*GLALQL
Trigger: GAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAA...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACGACAGGAAGTGGCCGTaGTCCAGCAGCTGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHDRKWP*SSSCCP
Trigger: AGGGCAGCAGCTGCTGGACAACGGCCACTTCCTGTC...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp AGTTCTGTTTCCAGAGCCTTGTGTTTCTGCAGAGCAGTAGCGATCTaGGTGAGGTCCCGGTCCAGGACCGCGGTCTCCATTAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SSVSRALCFCRAVAI*VRSRSRTAVSISCL
Trigger: CAGACAGCTAATGGAGACCGCGGTCCTGGACCGGGACCTCACTCAGATCGCTACTGCTCTGCAGAAACACAAGGCTCTGGAAACAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CAGCATCAGGACCTGCTCCCAAAGCAGCCTGCTCTCTGGGGAGCCTaGCTCCATCACCTCTATGGTTGCTCTTTGGAGGTAGGAGATCTT +
Preference number: 5 (lower is better)
Translates to: QHQDLLPKQPALWGA*LHHLYGCSLEVGDL
Trigger: AAGATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCAGGCTGCTTTGGGAGCAGGTCCTGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CCCAGGTCTCCATCTCTGACACGTTCAGAAAGTACTGCTGGACAGTaGCAGCCTGTTGCAGGCAGTGTGCACGTTCTTCACACGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PRSPSLTRSESTAGQ*QPVAGSVHVLHTPA
Trigger: AGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAACGTGTCAGAGATGGAGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp TCCAGACCTTCCACCAGCTGTCCATCATTTCTTGCTGCTTATGTCTaGGGCTGTGGGCAACCTCGGGACTTTCCTTGCAGAGCCGGCCAA +
Preference number: 5 (lower is better)
Translates to: SRPSTSCPSFLAAYV*GCGQPRDFPCRAGQ
Trigger: TTGGCCGGCTCTGCAAGGAAAGTCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGAAATGATGGACAGCTGGTGGAAGGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CCACGTGTCAGCTGCAGGAGTTTCTCCTCCTTCAGGGCTTCCAGCTaGTGCCACCACCTTTGCTTCAGGTCCTCCTGTTGTTGTTGGATT +
Preference number: 5 (lower is better)
Translates to: PRVSCRSFSSFRASS*CHHLCFRSSCCCWI
Trigger: AATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAGCTGGAAGCCCTGAAGGAGGAGAAACTCCTGCAGCTGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTGGTGACACTTCTGGCTCTCCTCCAGGATGGTCCAGGAAGTGAATaGATTGTGGGTCTGAGAGATGAGGGCATCCATCTTGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LVTLLALLQDGPGSE*IVGLRDEGIHLAGQ
Trigger: CTGGCCAGCAAGATGGATGCCCTCATCTCTCAGACCCACAATGCATTCACTTCCTGGACCATCCTGGAGGAGAGCCAGAAGTGTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCATGCCAGCACTGGGCAGGGCAGTTGAGAGCGGCATTGGGCATGTaGTCAGCTGCCCATGTGAGCTCCAGGTTGCTAAGGAGATTAAAT +
Preference number: 5 (lower is better)
Translates to: SCQHWAGQLRAALGM*SAAHVSSRLLRRLN
Trigger: ATTTAATCTCCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAATGCCGCTCTCAACTGCCCTGCCCAGTGCTGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ATCTCTGACACGTTCAGAAAGTACTGCTGGACAGTGACAGCCTGTTaGAGGCAGTGTGCACGTTCTTCACACGCCTGCTCCAGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: ISDTFRKYCWTVTAC*RQCARSSHACSSPA
Trigger: GGCAGGACTGGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAACGTGTCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp ATCCTCTCCTTCTCCTGGATCCAGGTCTCTGCTAGGTCCACTCTCTaGAGGAACTCCTGGAAGTTGTATCTGTTCTCTAGGGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ILSFSWIQVSARSTL*RNSWKLYLFSRAWP
Trigger: GGGCCAGGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAGAGTGGACCTAGCAGAGACCTGGATCCAGGAGAAGGAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGGAAACGCAGAATGATGACCCAGAGGAGTCCCAGGATGAGTGACTaGTCCCCATCCACAATGTTCTCTGGCCCGATGAAGGGAATGGGC +
Preference number: 5 (lower is better)
Translates to: WKRRMMTQRSPRMSD*SPSTMFSGPMKGMG
Trigger: GCCCATTCCCTTCATCGGGCCAGAGAACATTGTGGATGGGGACCAGTCACTCATCCTGGGACTCCTCTGGGTCATCATTCTGCGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GCACTGGCCCCAAACTCCTCCCTGTCCAAGGAGATGTGGGAAATCTaGAAACGCAGAATGATGACCCAGAGGAGTCCCAGGATGAGTGAC +
Preference number: 5 (lower is better)
Translates to: ALAPNSSLSKEMWEI*KRRMMTQRSPRMSD
Trigger: GTCACTCATCCTGGGACTCCTCTGGGTCATCATTCTGCGTTTCCAGATTTCCCACATCTCCTTGGACAGGGAGGAGTTTGGGGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTTTCTAGGGAAGCCATCCGCTCCCTCAGGGTCTGCATCTTGGCCTaGCCCAGGCTCTGGACTTCTCTGTTGAAAGCACCAAACATGTCT +
Preference number: 5 (lower is better)
Translates to: LSREAIRSLRVCILA*PRLWTSLLKAPNMS
Trigger: AGACATGTTTGGTGCTTTCAACAGAGAAGTCCAGAGCCTGGGCCAGGCCAAGATGCAGACCCTGAGGGAGCGGATGGCTTCCCTAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCTGGGCCTCGATCTTCCATCTaGTGGTTCAACTCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ACPLTGAVFCTLVLSSPGPRSSI*WFNSSH
Trigger: ATGGGAAGAGTTGAACCACAAGATGGAAGATCGAGG...CCCAGGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCACAGCTCCACAAAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCACACTGGGCAGGGCAGTaGAGAGCGGCATTGGGCATG +
Preference number: 5 (lower is better)
Translates to: AQLHKGVSGTSTSDTNMSHWAGQ*RAALGM
Trigger: CATGCCCAATGCCGCTCTCAACTGCCCTGCCCAGTG...TGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTTTGTGGAGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCATTCTGCCCACAGCCATaGATGGGCTCTGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: DTNMSAALSQSLGWKLQAFCPQP*MGSEPE
Trigger: CTCAGGCTCAGAGCCCATCAATGGCTGTGGGCAGAA...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCATCTTAGTGGCCCGTaGCTGCAGCTCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLHLSGP*LQLLLG
Trigger: GCCAAGGAGGAGCTGCAGCAACGGGCCACTAAGATG...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAACTGCTCCGGAGACCTCTCCAGCTaGAGGGTGGCTCTGACTGAG +
Preference number: 5 (lower is better)
Translates to: LTPFPFCSEFKTSITNCSGDLSS*RVALTE
Trigger: CTCAGTCAGAGCCACCCTCAAGCTGGAGAGGTCTCC...GGAGCAGTTGGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGCCTCGAGCATATCTTCCTCTGGCAGTaGGTCTGCAGCTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: QAVTSTLKAGPFPRGLEHIFLWQ*VCSSSQ
Trigger: CTGGGATGAGCTGCAGACCAACTGCCAGAGGAAGAT...ATGCTCGAGGCCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTTGCAGATGCAGGACCTaGAGGGCCCCCTGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTCRCRT*RAPCSL
Trigger: CAGACTACAGGGGGCCCTCAAGGTCCTGCATCTGCA...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GACAAGCTGTTACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCAGGAGCAAGGCCTCTaGCTCCAGCTGGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: DKLLRLTHYNICNNQDRLQEQGL*LQLVQV
Trigger: CACCTGTACCAGCTGGAGCAAGAGGCCTTGCTCCTG...CAGCCGATCCTGGTTGTTGCAGATGTTGTAATGCGTCAGCCGTAACAGCTTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp TTCTTCTCCAATACCAGGACCTTCTGCTGGGTCTGCTGTAGGGTATaGTGGCTGTCCCCAGAGCTTCTTGTTCCCAGAGTCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FFSNTRTFCWVCCRV*WLSPELLVPRVSSL
Trigger: CAGGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACAGCCATCATACCCTACAGCAGACCCAGCAGAAGGTCCTGGTATTGGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp CACAGGTCCTGGGCCACATCGTTAGGGAGGCTTGTGGCTTTCTCCTaGATCTGGGTAAGGACTTCCAGAAGGTCTCCGTGGACTCTAAGA +
Preference number: 5 (lower is better)
Translates to: HRSWATSLGRLVAFS*IWVRTSRRSPWTLR
Trigger: TCTTAGAGTCCACGGAGACCTTCTGGAAGTCCTTACCCAGATTCAGGAGAAAGCCACAAGCCTCCCTAACGATGTGGCCCAGGACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGCATCTTCTTCTCCTCAATCCAGCAGAGCAGGTCAGCCACCAGTTaGTTGTATTGTGCCTGCAATACCTCCGTCTCCTGCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CIFFSSIQQSRSATS*LYCACNTSVSCSCS
Trigger: GCTGCAGCTGCAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACTGGTGGCTGACCTGCTCTGCTGGATTGAGGAGAAGAAGATGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCTGGCTGTGTCAGGGGCTCTCTGACACTGAAGTTGCGTCCTCTCTaGATGAGATCTACACACACTGCCTGGTGGCGATGGAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SGCVRGSLTLKLRPL*MRSTHTAWWRWSSV
Trigger: AACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAACTTCAGTGTCAGAGAGCCCCTGACACAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GGGCTTGTATGGGTTCAGACTCCTGTAAAAGACTGCACACCTCCATaGCACGTGTCAGCTGCAGGAGTTTCTCCTCCTTCAGGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GLVWVQTPVKDCTPP*HVSAAGVSPPSGLP
Trigger: TGGAAGCCCTGAAGGAGGAGAAACTCCTGCAGCTGACACGTGGCATGGAGGTGTGCAGTCTTTTACAGGAGTCTGAACCCATACAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GCACTGGGCAGGGCAGTTGAGAGCGGCATTGGGCATGTGCTCAGCTaGCCATGTGAGCTCCAGGTTGCTAAGGAGATTAAATTCATACAG +
Preference number: 5 (lower is better)
Translates to: ALGRAVESGIGHVLS*PCELQVAKEIKFIQ
Trigger: CTGTATGAATTTAATCTCCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAATGCCGCTCTCAACTGCCCTGCCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGGGCTTTGCTCCAGACCTTCCACCAGCTGTCCATCATTTCTTGCTaGTTATGTCTGAGGCTGTGGGCAACCTCGGGACTTTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: WALLQTFHQLSIISC*LCLRLWATSGLSLQ
Trigger: CTGCAAGGAAAGTCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGAAATGATGGACAGCTGGTGGAAGGTCTGGAGCAAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AGCCGCAGTAGGTGGGCACCGTCAGCAAACTCTGTGTACAGGTTCTaGATCCTGATGCCCACCCGTCCTAGTCGGAAGATGTTATTGATC +
Preference number: 5 (lower is better)
Translates to: SRSRWAPSANSVYRF*ILMPTRPSRKMLLI
Trigger: GATCAATAACATCTTCCGACTAGGACGGGTGGGCATCAGGATCCAGAACCTGTACACAGAGTTTGCTGACGGTGCCCACCTACTGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ACCTGGCTCAGAGCCTTGTGGCTATGGATCTCATTCTCCAAATTCTaGTGTTTCTCCTGCAGGTGGCGCACAGTGTTAAGGCTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: TWLRALWLWISFSKF*CFSCRWRTVLRLWP
Trigger: CGGCCAGAGCCTTAACACTGTGCGCCACCTGCAGGAGAAACACCAGAATTTGGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TTGTGCCCTGTACCTGTCACCACCTGGCTCAGAGCCTTGTGGCTATaGATCTCATTCTCCAAATTCTGGTGTTTCTCCTGCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: LCPVPVTTWLRALWL*ISFSKFWCFSCRWR
Trigger: GCGCCACCTGCAGGAGAAACACCAGAATTTGGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TCTGCTGTACCAGGCTGTTACTTCCACTCTGAAAGCAGGTCCCTTCCCAAGAGGTTTGGGCTCGGAGTGTaGTCTGCAGCTGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: SAVPGCYFHSESRSLPKRFGLGV*SAAGRA
Trigger: TGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAA...CCTCTTGGGAAGGGACCTGCTTTCAGAGTGGAAGTAACAGCCTGGTACAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTGGTCCTGAGCAGCCCCATCTTGTGCTTTCGTaGAAGGCTGTGGGCATCATG +
Preference number: 5 (lower is better)
Translates to: SCLSSDRSCVLHTGPEQPHLVLS*KAVGIM
Trigger: CATGATGCCCACAGCCTTCAACGAAAGCACAAGATG...GGGCTGCTCAGGACCAGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGAGTCCGTAGTCCTGACTGCTaGCCAGAGGCCGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: CLGLPQVTLTCQQPCHRVRSPDC*PEAAFP
Trigger: AGGAAAAGCGGCCTCTGGCAAGCAGTCAGGACTACG...GACTCTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGGCCATGCACCAGGCAAAGTCTTCCACCTATaGTTGAGCTGGTTTTGCCGC +
Preference number: 5 (lower is better)
Translates to: ALQHLQQPGSAAGGHAPGKVFHL*LSWFCR
Trigger: GCGGCAAAACCAGCTCAACAATAGGTGGAAGACTTT...GCCTGGTGCATGGCCTCCCGCAGCCGATCCTGGTTGTTGCAGATGTTGTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCCGCTGCCCCATGCTTaGGACCAGGTTAAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHPLPHA*DQVKAL
Trigger: GAGAGCCTTAACCTGGTCCAAAGCATGGGGCAGCGG...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCCTGGACCTCCTGCTGTaGGTGAACACTGGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: PSLPRDLAMKPWFISGIALDLLL*VNTGVQ
Trigger: CTGGACGCCAGTGTTCACCAACAGCAGGAGGTCCAG...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TGGAGAGCTAGCACTTTCTGGAAGATCACGTGCTTTCGGATCAACTaGTCCACTTCTTCCACTGAGCTCCCCAGGCCACTGGCTTTTAGG +
Preference number: 5 (lower is better)
Translates to: WRASTFWKITCFRIN*STSSTELPRPLAFR
Trigger: CCTAAAAGCCAGTGGCCTGGGGAGCTCAGTGGAAGAAGTGGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GACTCCTTCTTGTCCTGGAGAGCTAGCACTTTCTGGAAGATCACGTaGTTTCGGATCAACTGCTCCACTTCTTCCACTGAGCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: DSFLSWRASTFWKIT*FRINCSTSSTELPR
Trigger: CCTGGGGAGCTCAGTGGAAGAAGTGGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CGCTGGCAGATGGTCTCGGATTCCTCAGGGCCCTGGTTCTTGAGCTaGAGTGACAAGTTTTTGATTCCCTTGATGTGGGCATCATCCACT +
Preference number: 5 (lower is better)
Translates to: RWQMVSDSSGPWFLS*SDKFLIPLMWASST
Trigger: AGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAGACCATCTGCCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TTGCGTCCTCTCTGCATGAGATCTACACACACTGCCTGGTGGCGATaGAGTTCTGTTTCCAGAGCCTTGTGTTTCTGCAGAGCAGTAGCG +
Preference number: 5 (lower is better)
Translates to: LRPLCMRSTHTAWWR*SSVSRALCFCRAVA
Trigger: CGCTACTGCTCTGCAGAAACACAAGGCTCTGGAAACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCCAAAGCAGCCTGCTCTCTGGGGAGCCTGACTCCATCACCTCTATaGTTGCTCTTTGGAGGTAGGAGATCTTCTTCTCCAATACCAGGA +
Preference number: 5 (lower is better)
Translates to: PKAACSLGSLTPSPL*LLFGGRRSSSPIPG
Trigger: TCCTGGTATTGGAGAAGAAGATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCAGGCTGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCCCTTATGTCCTCCCCAAGGTTGTCCAGCTGCAGTAAGGCCTCATaGCTGGCACAGGTGGCCATGAAATCATCTACTTCTTGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: SLMSSPRLSSCSKAS*LAQVAMKSSTSWPN
Trigger: GTTTGGCCAAGAAGTAGATGATTTCATGGCCACCTGTGCCAGCCATGAGGCCTTACTGCAGCTGGACAACCTTGGGGAGGACATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCCTGCTGCCACCACCTTaGCTTCAGGTCCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: PSLPRDLAMKPWFISGIALLPPP*LQVLLL
Trigger: CAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAG...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CCATCTTTGCCCAGAGATCTTGCAATGAAGCCATGGTTCATCTCAGGCATAGCCTGTCCCCAGAGCTTCTaGTTCCCAGAGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PSLPRDLAMKPWFISGIACPQSF*FPESPA
Trigger: GGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACA...GGCTATGCCTGAGATGAACCATGGCTTCATTGCAAGATCTCTGGGCAAAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTAGAGCCGACTCCTTCTaGTCCTGGAGAGCTAGCACT +
Preference number: 5 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSRADSF*SWRAST
Trigger: AGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGCTCT...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATGAGGAGCTCTTCGCCTaGCTTGGCAACAGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNEELFA*LGNRGQ
Trigger: TTGACCTCTGTTGCCAAGCAAGGCGAAGAGCTCCTC...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGTCAGGGCCCTGGTTCTaGAGCTGCAGTGACAAGTTT +
Preference number: 5 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQSGPWF*SCSDKF
Trigger: AAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGA...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AACTGCTCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTCTTCTGCAACTGTGTTaGCATCGTGGCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: NCSRDSGNSDVQAQLHKGLLQLC*HRGWVL
Trigger: CAGGACCCAGCCACGATGCAAACACAGTTGCAGAAG...ACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp GCAGATGGTCTCGGATTCCTCAGGGCCCTGGTTCTTGAGCTGCAGTaGCAAGTTTTTGATTCCCTTGATGTGGGCATCATCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: ADGLGFLRALVLELQ*QVFDSLDVGIIHCD
Trigger: GTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAGACCATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp CTTAGTTATTTTGCGCCACTTGAGTTTCTGCAGAATGTTGCTTCCTaGTTGGGAGCGCTCATCAGCCACCCTGGGCCACTTCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LSYFAPLEFLQNVAS*LGALISHPGPLLLH
Trigger: ATGGAGGAGAAGTGGCCCAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAAATAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GGTGTCTCTGCCAAGCCTTTTCCAGTCTTCTGGAGGTTCCTCATTTaGTGTAGGAGAGACAAGTCTGGATCCTTTCCATGTCCCCGTGTG +
Preference number: 5 (lower is better)
Translates to: GVSAKPFPVFWRFLI*CRRDKSGSFPCPRV
Trigger: CACACGGGGACATGGAAAGGATCCAGACTTGTCTCTCCTACACCAAATGAGGAACCTCCAGAAGACTGGAAAAGGCTTGGCAGAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp ATGAGCTTGTGCCCTGTACCTGTCACCACCTGGCTCAGAGCCTTGTaGCTATGGATCTCATTCTCCAAATTCTGGTGTTTCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: MSLCPVPVTTWLRAL*LWISFSKFWCFSCR
Trigger: CCTGCAGGAGAAACACCAGAATTTGGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TCCAGAGACTCTGGAAACTCTGATGTCCAGGCACAGCTCCACAAAGGTGTGTCTCAGGTCAGCCACCAGTaGCTTGTATTGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: SRDSGNSDVQAQLHKGVSQVSHQ*LVLCLQ
Trigger: TTGCAGGCACAATACAAGCAACTGGTGGCTGACCTG...AGACACACCTTTGTGGAGCTGTGCCTGGACATCAGAGTTTCCAGAGTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GTGACTTGCGACATCAGTTGCTTGTCCTCTGACAGGAGCTGTGTTCTGCACACTAGTTTCTGCAGAATGTaGCTTCCTGCTTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VTCDISCLSSDRSCVLHTSFCRM*LPAWER
Trigger: GCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACT...AGTGTGCAGAACACAGCTCCTGTCAGAGGACAAGCAACTGATGTCGCAAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATAAACTCAGTGCAGAGTaGCAGCACGTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNKLSAE*QHVLMV
Trigger: GACCATGAGCACGTGCTGCAACTCTGCACTGAGTTT...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGAGGGTACCTTTGGGTCAGTAGTCGAGTGGTTCCCAGGTGTGTCTCCACTGGTCTCTGGACTTCTCTGTaGAAAGCACCAAACATGTCT +
Preference number: 5 (lower is better)
Translates to: GGYLWVSSRVVPRCVSTGLWTSL*KAPNMS
Trigger: AGACATGTTTGGTGCTTTCAACAGAGAAGTCCAGAG...ACCAGTGGAGACACACCTGGGAACCACTCGACTACTGACCCAAAGGTACCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 90 bp AGTCGACAGGTTTCCACTCGCTGGGCACCAGTTTCAACCTGGTACTaGAACTTTGTAAACTCAGTGCAGAGTTGCAGCACGTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: SRQVSTRWAPVSTWY*NFVNSVQSCSTCSW
Trigger: CCATGAGCACGTGCTGCAACTCTGCACTGAGTTTACAAAGTTTCAGTACCAGGTTGAAACTGGTGCCCAGCGAGTGGAAACCTGTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCTCCTGTTGTTGTTGGATTTTCGAGATGTGTCCTGGACATCTCTaGTTCAGTTGTTCAGCAGTGTTGATGGCCTCTGCCCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SSCCCWIFEMCPGHL*FSCSAVLMASAQWP
Trigger: AGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TCCAGGTTGCTAAGGAGATTAAATTCATACAGCTCAACTGAGGCCTaGAGTTGCTGGTGTTGGGTGGCTAGCTTGCTCTGCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: SRLLRRLNSYSSTEA*SCWCWVASLLCRDL
Trigger: CAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAATTTAATCTCCTTAGCAACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CCCTGGTTCTTGAGCTGCAGTGACAAGTTTTTGATTCCCTTGATGTaGGCATCATCCACTGTGACCTGTAACCTGCGGACTTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PWFLSCSDKFLIPLM*ASSTVTCNLRTCLQ
Trigger: CTGCAGACAAGTCCGCAGGTTACAGGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACCAAGCTTCCAGGTATTaGGAGCCTCTTCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHQASRY*EPLLWR
Trigger: TCTCCAGAGAAGAGGCTCCAAATACCTGGAAGCTTG...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATGAAATCATCTACTTCTaGGCCAAACCCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNEIIYF*AKPLQL
Trigger: GAGCTGCAGGGGTTTGGCCAAGAAGTAGATGATTTC...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp CTCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACATTGTTGAGCTGGTTTaGCCGCTGGCAGATGGTCTC +
Preference number: 5 (lower is better)
Translates to: LLVFNSFPLLLRVQDQHHIVELV*PLADGL
Trigger: GAGACCATCTGCCAGCGGCAAAACCAGCTCAACAAT...GTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACAGGCTGTCCATCATTTCTaGCTGCTTATGTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GVSGTSTSDTNMSAALSQAVHHF*LLMSEA
Trigger: AGCCTCAGACATAAGCAGCAAGAAATGATGGACAGC...CTGTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TATGATGGCTGTCCCCAGAGCTTCTTGTTCCCAGAGTCTCCAGCCTaGTTATCACATTTAGCAGTTGGGCTTGTATGGGTTCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: YDGCPQSFLFPESPA*LSHLAVGLVWVQTP
Trigger: AGGAGTCTGAACCCATACAAGCCCAACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACAGCCATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp GAGGCTAATAGCTCACTCTTAGTTATTTTGCGCCACTTGAGTTTCTaGAGAATGTTGCTTCCTGCTTGGGAGCGCTCATCAGCCACCCTG +
Preference number: 5 (lower is better)
Translates to: EANSSLLVILRHLSF*RMLLPAWERSSATL
Trigger: CAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAAATAACTAAGAGTGAGCTATTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp TTGCTAAGGAGATTAAATTCATACAGCTCAACTGAGGCCTGCAGTTaGTGGTGTTGGGTGGCTAGCTTGCTCTGCAGGGACTTGAACCTC +
Preference number: 5 (lower is better)
Translates to: LLRRLNSYSSTEACS*WCWVASLLCRDLNL
Trigger: GAGGTTCAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAATTTAATCTCCTTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 90 bp AATAACGTCATCCAGTTCCCTGGACAATCTATGTATCTCCAGGGCTaGTTCAAGCCGCTGCTGATAGAGGAGCAGGTTGCCATGGAAAGT +
Preference number: 5 (lower is better)
Translates to: NNVIQFPGQSMYLQG*FKPLLIEEQVAMES
Trigger: ACTTTCCATGGCAACCTGCTCCTCTATCAGCAGCGGCTTGAAGCAGCCCTGGAGATACATAGATTGTCCAGGGAACTGGATGACGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TCATTCAGAGCCGACTCCTTCTTGTCCTGGAGAGCTAGCACTTTCTaGAAGATCACGTGCTTTCGGATCAACTGCTCCACTTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: SFRADSFLSWRASTF*KITCFRINCSTSST
Trigger: AGTGGAAGAAGTGGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGCTCTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp AAGGTGTGTCTGGGACTTCCACAAGTGACACTAACATGTCAGCAGCCCTGTCACTCTGTTTCCAGAGCCTaGTGTTTCTGCAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: KVCLGLPQVTLTCQQPCHSVSRA*CFCRAV
Trigger: TACTGCTCTGCAGAAACACAAGGCTCTGGAAACAGA...GTGACAGGGCTGCTGACATGTTAGTGTCACTTGTGGAAGTCCCAGACACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp GACACTAACATGTCAGCAGCCCTGTCACAGAGTCTAGGCTGGAAGCTGCAAGCACTTCAGGTCCTCCTGTaGTTGTTGGATTTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: DTNMSAALSQSLGWKLQALQVLL*LLDFRD
Trigger: ATCTCGAAAATCCAACAACAACAGGAGGACCTGAAG...TGCTTGCAGCTTCCAGCCTAGACTCTGTGACAGGGCTGCTGACATGTTAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp TCTTGGTCTTTAACTCCTTTCCCCTTCTGCTCCGAGTTCAAGACCAGCATCACCAGGAACTCCTGGAAGTaGTATCTGTTCTCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: SWSLTPFPFCSEFKTSITRNSWK*YLFSRA
Trigger: GGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCT...GGTGATGCTGGTCTTGAACTCGGAGCAGAAGGGGAAAGGAGTTAAAGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp TGTCTCCCAACTCTTCAAGCTTCCAGGTATTTGGAGCCTCTTCTCTaGAGAAGAAGGCTATCTGCTGATGTGAATAATGGCTGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: CLPTLQASRYLEPLL*RRRLSADVNNGCLV
Trigger: CACCAGGCAGCCATTATTCACATCAGCAGATAGCCTTCTTCTCCAGAGAAGAGGCTCCAAATACCTGGAAGCTTGAAGAGTTGGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CATCTCTGCTTCAGTTGTTCAGCAGTGTTGATGGCCTCTGCCCAGTaGCCTTTTCCAGTGGCCAAGGTCATGAGAACATTCTCATATTTG +
Preference number: 5 (lower is better)
Translates to: HLCFSCSAVLMASAQ*PFPVAKVMRTFSYL
Trigger: CAAATATGAGAATGTTCTCATGACCTTGGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp CTTCTTGTTCCCAGAGTCTCCAGCCTGCTTATCACATTTAGCAGTTaGGCTTGTATGGGTTCAGACTCCTGTAAAAGACTGCACACCTCC +
Preference number: 5 (lower is better)
Translates to: LLVPRVSSLLITFSS*ACMGSDSCKRLHTS
Trigger: GGAGGTGTGCAGTCTTTTACAGGAGTCTGAACCCATACAAGCCCAACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGGGAACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp GAAATCGTCTTTAGCTGCTCATTCAGAGCCGACTCCTTCTTGTCCTaGAGAGCTAGCACTTTCTGGAAGATCACGTGCTTTCGGATCAAC +
Preference number: 5 (lower is better)
Translates to: EIVFSCSFRADSFLS*RASTFWKITCFRIN
Trigger: GTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGCTCTGAATGAGCAGCTAAAGACGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 90 bp AGAACATTCTCATATTTGAGTTGTATGACCTCTAAGTTGTGTCCCTaGGGCTGCAATGTTTGGAACAGTGCGGTCTGCTTCTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RTFSYLSCMTSKLCP*GCNVWNSAVCFSSQ
Trigger: CTGGCTGGAGAAGCAGACCGCACTGTTCCAAACATTGCAGCCCCAGGGACACAACTTAGAGGTCATACAACTCAAATATGAGAATGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS-3UTR CAA 90 bp ATGGACGTTCCGGTCCTGTCACAGGTTGCCATCTTTGCCCAGAGATCTTGCAATCATGCAGTTACCTCATaGGAATCCTGCAAAAATGTC +
Preference number: 5 (lower is better)
Translates to: MDVPVLSQVAIFAQRSCNHAVTS*ESCKNV
Trigger: GACATTTTTGCAGGATTCCAATGAGGTAACTGCATG...ATTGCAAGATCTCTGGGCAAAGATGGCAACCTGTGACAGGACCGGAACGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGCTCGCGCAGCTCCGCCGCGAAGGCGCGCACGTCTTaGTCCAGGCGCAGGTGTTGCAGCAACAGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSRSSAAKARTS*SRRRCCSNRAS
Trigger: CGAGGCCCTGTTGCTGCAACACCTGCGCCTGGAGCAAGACGTGCGCGCCTTCGCGGCGGAGCTGCGCGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGCGTGCACGGAGGGCCTCTGCCCGTGATCCCAGGGTaGTGCGGAGCCACCCCAAACCCTGGTGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RVHGGPLPVIPG*CGATPNPGAAA
Trigger: TGCAGCAGCACCAGGGTTTGGGGTGGCTCCGCAGCACCCTGGGATCACGGGCAGAGGCCCTCCGTGCACGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CAGCTCCGCCGCGAAGGCGCGCACGTCTTGCTCCAGGCGCAGGTGTaGCAGCAACAGGGCCTCGGCGTCTGCCTGGTCCTTCCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: QLRREGAHVLLQAQV*QQQGLGVCLVLPAG
Trigger: TCCTGCGGGAAGGACCAGGCAGACGCCGAGGCCCTGTTGCTGCAACACCTGCGCCTGGAGCAAGACGTGCGCGCCTTCGCGGCGGAGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CAGCTTCTCACCGCGTGCACGGAGGGCCTCTGCCCGTaGTCCCAGGGTGCTGCGGAGCCACCCCAAACCCTG +
Preference number: 6 (lower is better)
Translates to: QLLTACTEGLCP*SQGAAEPPQTL
Trigger: CAGGGTTTGGGGTGGCTCCGCAGCACCCTGGGATCACGGGCAGAGGCCCTCCGTGCACGCGGTGAGAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGGGCGCGCCGCCTTGCGGCTCCAGCCCAGAGCAGCTaGCAGGTTCCCTGCACTGCTTCTGCCCTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: RARRLAAPAQSS*QVPCTASALSS
Trigger: ACTGGAAAGGGCAGAAGCAGTGCAGGGAACCTGGCAGCTGCTCTGGGCTGGAGCCGCAAGGCGGCGCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGCAGCTCCTCCAGCTGGTGTCCCCGGGCCCTCGCTTaGTCTGTGAGTGCCTCTGTCCTCAGGAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RSSSSWCPRALA*SVSASVLRSRA
Trigger: GGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GGCACCTTGGCCCTGAGGAAGGCCAGGGCGTGGCTGTaGTTCTCCAGGAAGTGCACGCGCAGGCGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: GTLALRKARAWL*FSRKCTRRRPG
Trigger: TCCGGGCCGCCTGCGCGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCTCAGGGCCAAGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CCGCAGCTCCTCCAGCTGGTGTCCCCGGGCCCTCGCTaGCTCTGTGAGTGCCTCTGTCCTCAGGAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PQLLQLVSPGPR*LCECLCPQEQG
Trigger: GCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp AAGGGAATGGGCACCTTGGCCCTGAGGAAGGCCAGGGCGTGGCTGTaGTTCTCCAGGAAGTGCACGCGCAGGCGGCCCGGACTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: KGMGTLALRKARAWL*FSRKCTRRRPGLGA
Trigger: AGCGCCCAGTCCGGGCCGCCTGCGCGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCTCAGGGCCAAGGTGCCCATTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CCTGTAGACACCGTAGGAGCCTCCGCCAGCGCCCCGTaGTCTCCTTCTGCCTGCGGGCCATATCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: PVDTVGASASAP*SPSACGPYPPS
Trigger: GCTGGGCGGATATGGCCCGCAGGCAGAAGGAGATCACGGGGCGCTGGCGGAGGCTCCTACGGTGTCTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CCTCCAGCTGGTGTCCCCGGGCCCTCGCTTGCTCTGTaGGTGCCTCTGTCCTCAGGAGCAGGGCCTGGCATC +
Preference number: 6 (lower is better)
Translates to: PPAGVPGPSLAL*VPLSSGAGPGI
Trigger: GATGCCAGGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CAGGGCCTCTGTGGCTCCTCGCTGCTGCCACCGAGGTaGCTTTTCCCGGGCACGGAAGGAGGCAAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: QGLCGSSLLPPR*LFPGTEGGKGC
Trigger: GCAGCCTTTGCCTCCTTCCGTGCCCGGGAAAAGCCACCTCGGTGGCAGCAGCGAGGAGCCACAGAGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CAGCTGGTGTCCCCGGGCCCTCGCTTGCTCTGTGAGTaGCTCTGTCCTCAGGAGCAGGGCCTGGCATCTGTC +
Preference number: 6 (lower is better)
Translates to: QLVSPGPRLLCE*LCPQEQGLASV
Trigger: GACAGATGCCAGGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGAATGGGCACCTTGGCCCTGAGGAAGGCCAGGGCGTaGCTGTTGTTCTCCAGGAAGTGCACGCGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: GMGTLALRKARA*LLFSRKCTRRR
Trigger: CCGCCTGCGCGTGCACTTCCTGGAGAACAACAGCCACGCCCTGGCCTTCCTCAGGGCCAAGGTGCCCATTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CACCCAAGGCCTGGAAGCGCCCTTCCTGGGGCAGGATaGCAGCCTCCAGAACGCTCAGCCTCTGAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: HPRPGSALPGAG*QPPERSASEWL
Trigger: CAGCCACTCAGAGGCTGAGCGTTCTGGAGGCTGCCATCCTGCCCCAGGAAGGGCGCTTCCAGGCCTTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCCTGCCGGAGGATGTCTGCCATCTCACCCAAGGCCTaGAAGCGCCCTTCCTGGGGCAGGATGGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SCRRMSAISPKA*KRPSWGRMAAS
Trigger: GGAGGCTGCCATCCTGCCCCAGGAAGGGCGCTTCCAGGCCTTGGGTGAGATGGCAGACATCCTCCGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GACGGCCAGCTTGGTGGTCAGCCAGGCATCCAGGAGCAAGGCCTCTaGCTCCAGCTGGTACAGGTGCAGCTGTTCACGCAGCGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DGQLGGQPGIQEQGL*LQLVQVQLFTQRLP
Trigger: GGGGAGGCGCTGCGTGAACAGCTGCACCTGTACCAGCTGGAGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GCTGGAGGGTCTGCTCCAGCAGGGTACGTCGGGCTCTaGCAAGAGACACCAGGCTGTGGTGGAGCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: AGGSAPAGYVGL*QETPGCGGARP
Trigger: TGGCCGAGCTCCACCACAGCCTGGTGTCTCTTGTCAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTGTCCTCAGGAGCAGGGCCTGGCATCTGTCCAGGATaGTACGCGCCTCAGAGTGTCCACCCTGGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: LSSGAGPGICPG*YAPQSVHPGAG
Trigger: GCCTGCACCAGGGTGGACACTCTGAGGCGCGTAGCATCCTGGACAGATGCCAGGCCCTGCTCCTGAGGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCAGAAGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCCCCRRGC
Trigger: ACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCTGCCATCTCACCCAAGGCCTGGAAGCGCCCTTCCTaGGGCAGGATGGCAGCCTCCAGAACGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SAISPKAWKRPS*GRMAASRTLSL
Trigger: GAGGCTGAGCGTTCTGGAGGCTGCCATCCTGCCCCAGGAAGGGCGCTTCCAGGCCTTGGGTGAGATGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CTGTCCAGGATGCTACGCGCCTCAGAGTGTCCACCCTaGTGCAGGCTGTGGGCTGTGGCCTCCAATGCACGG +
Preference number: 6 (lower is better)
Translates to: LSRMLRASECPP*CRLWAVASNAR
Trigger: CCGTGCATTGGAGGCCACAGCCCACAGCCTGCACCAGGGTGGACACTCTGAGGCGCGTAGCATCCTGGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CAGCCTCTGCCGCAGCTGTTGCAGGCTCCGGGTCTGTTCCCAGCGTaGTCCACGCAGGGCCCAGGCTACCTGAAGCTCCTGCAGATGTCT +
Preference number: 6 (lower is better)
Translates to: QPLPQLLQAPGLFPA*STQGPGYLKLLQMS
Trigger: AGACATCTGCAGGAGCTTCAGGTAGCCTGGGCCCTGCGTGGACAACGCTGGGAACAGACCCGGAGCCTGCAACAGCTGCGGCAGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp AGCAGCAGCTTCTGGCTCTCCTGGAGGATGCCTCGCTaGACCCGAGCCACAGTCTGGACCTGGATCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SSSFWLSWRMPR*TRATVWTWICR
Trigger: CCGGCAGATCCAGGTCCAGACTGTGGCTCGGGTTCAGCGAGGCATCCTCCAGGAGAGCCAGAAGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTGCCCACAGCAGCAGCTTCTGGCTCTCCTGGAGGATaGCTCGCTGAACCCGAGCCACAGTCTGGACCTGGA +
Preference number: 6 (lower is better)
Translates to: LPTAAASGSPGG*LAEPEPQSGPG
Trigger: TCCAGGTCCAGACTGTGGCTCGGGTTCAGCGAGGCATCCTCCAGGAGAGCCAGAAGCTGCTGCTGTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGGCTGGAGCACAGGTCCTGCCCGGTTTCTGTGCTCTaGAGGGCTCCCTCCAGATGCTCCATTGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLEHRSCPVSVL*RAPSRCSIVSW
Trigger: CCAGGAGACAATGGAGCATCTGGAGGGAGCCCTGCAGAGCACAGAAACCGGGCAGGACCTGTGCTCCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCAGCTCATCCCAGAGGCCTCCTAATTCTTCCAGTTaGCCCCGGATGGTCTCTGAGGCCGGGTGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: CSSSQRPPNSSS*PRMVSEAGWPP
Trigger: AGGGGGCCACCCGGCCTCAGAGACCATCCGGGGGCAACTGGAAGAATTAGGAGGCCTCTGGGATGAGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCAGAAGGGGCTGTGAAGGTGACAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CRRGCEGDRLW
Trigger: CCACAGCCTGTCACCTTCACAGCCCCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGATGCAGGGCTGCCACATCCTCAGGGTCGAGCAGCTaGGCAATGCCAAGCTGCTGCTCAGCCACTCGGAAG +
Preference number: 6 (lower is better)
Translates to: GCRAATSSGSSS*AMPSCCSATRK
Trigger: CTTCCGAGTGGCTGAGCAGCAGCTTGGCATTGCCCAGCTGCTCGACCCTGAGGATGTGGCAGCCCTGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGCCTTCGGTTTTGGGCTCGGAGTGTTGTCTGCAGCTaGAAGAGCAGGGCCTCTGTGGCTCCTCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GLRFWARSVVCS*KSRASVAPRCC
Trigger: GCAGCAGCGAGGAGCCACAGAGGCCCTGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAAACCGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCCTCCTCCTCACAGCTGCGCAGAAACTGTGCTCGCTaGAGGGTCTGCTCCAGCAGGGTACGTCGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SSSSQLRRNCAR*RVCSSRVRRAL
Trigger: CAGAGCCCGACGTACCCTGCTGGAGCAGACCCTCCAGCGAGCACAGTTTCTGCGCAGCTGTGAGGAGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCTGCTGGCTGTGCTGGCCTAGGAGCCTTAGAGCGCTaGCCACCTCCTGGGACTGTGGAGAGTCTGAGACTG +
Preference number: 6 (lower is better)
Translates to: AAGCAGLGALER*PPPGTVESLRL
Trigger: CAGTCTCAGACTCTCCACAGTCCCAGGAGGTGGCCAGCGCTCTAAGGCTCCTAGGCCAGCACAGCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CTACGCGCCTCAGAGTGTCCACCCTGGTGCAGGCTGTaGGCTGTGGCCTCCAATGCACGGATCTTTTCGGCC +
Preference number: 6 (lower is better)
Translates to: LRASECPPWCRL*AVASNARIFSA
Trigger: GGCCGAAAAGATCCGTGCATTGGAGGCCACAGCCCACAGCCTGCACCAGGGTGGACACTCTGAGGCGCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCCAGAGGCCTCCTAATTCTTCCAGTTGCCCCCGGATaGTCTCTGAGGCCGGGTGGCCCCCTTGTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PRGLLILPVAPG*SLRPGGPLVAA
Trigger: AGCTGCTACAAGGGGGCCACCCGGCCTCAGAGACCATCCGGGGGCAACTGGAAGAATTAGGAGGCCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CGAGGCTCCCCTTGCCAAGATCCCATGGCTGCTGGTTaGGAAGCTGGTTCTGGGCTGCCTCCCTTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: RGSPCQDPMAAG*EAGSGLPPFCG
Trigger: CCCACAGAAGGGAGGCAGCCCAGAACCAGCTTCCCAACCAGCAGCCATGGGATCTTGGCAAGGGGAGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GCGCAGCTGGAGGGCCTCCCAAGCTTGGGTCACAGCTaGCTGCTTTTGCTGGACAGCGGCAAGGGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: AQLEGLPSLGHS*LLLLDSGKGLS
Trigger: ACTCAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GCGCAGCTGGAGGGCCTCCCAAGCTTGGGTCACAGCTTGCTGCTTTaGCTGGACAGCGGCAAGGGCCTGAGTTCCTGGACACAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: AQLEGLPSLGHSLLL*LDSGKGLSSWTQLL
Trigger: CAGGAGCTGTGTCCAGGAACTCAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TTGAGCCTTGCGCTGCTCCATGCGCAGCTGGAGGGCCTCCCAAGCTaGGGTCACAGCTTGCTGCTTTTGCTGGACAGCGGCAAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LSLALLHAQLEGLPS*GHSLLLLLDSGKGL
Trigger: CAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTGCTCCATGCGCAGCTGGAGGGCCTCCCAAGCTTGGGTCACAGCTaGCTGCTTTTGCTGGACAGCGGCAAGGGCCTGAGTTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: LLHAQLEGLPSLGHS*LLLLDSGKGLSSWT
Trigger: TGTCCAGGAACTCAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CCTCACCGCTGTGTGGAACCGGACCAGGAGATATCCTCGTTCCAATaGAGCCTTGCGCTGCTCCATGCGCAGCTGGAGGGCCTCCCAAGC +
Preference number: 6 (lower is better)
Translates to: PHRCVEPDQEISSFQ*SLALLHAQLEGLPS
Trigger: GCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGTTCCACACAGCGGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CGCTGCTGGATCCAGTCCTCAGCCTGGGTTGCTGCCCTGACAAAGTaGCCTATCATCAGGGAGGTGTGCAGAGCCTGGCCCCGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: RCWIQSSAWVAALTK*PIIREVCRAWPRLS
Trigger: AGAGAGCCGGGGCCAGGCTCTGCACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GCCTCTGAGTGGCTGCCTCCACTGTGGCTGGGTCGGTaGGGGAGGCTCTGGCCTGGTCTAACATCTGCTCTA +
Preference number: 6 (lower is better)
Translates to: ASEWLPPLWLGR*GRLWPGLTSAL
Trigger: TAGAGCAGATGTTAGACCAGGCCAGAGCCTCCCTCACCGACCCAGCCACAGTGGAGGCAGCCACTCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CCCTGGGAGTCTAGCTGGGTGGTCTGGTGGACAAGATaGGTCACATGGGTCCTGTGGGCTGACACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PWESSWVVWWTR*VTWVLWADTWA
Trigger: GGCCCAGGTGTCAGCCCACAGGACCCATGTGACTCATCTTGTCCACCAGACCACCCAGCTAGACTCCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTGTGGTGGAGCTCGGCCAGTGCTAGGGCTTTAGCCTaGAGCACCTCCACACTGGTACCCTGGGAGTCTAGC +
Preference number: 6 (lower is better)
Translates to: LWWSSASARALA*STSTLVPWESS
Trigger: GCTAGACTCCCAGGGTACCAGTGTGGAGGTGCTGCAGGCTAAAGCCCTAGCACTGGCCGAGCTCCACCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGGACCTGGATCTGCCGGGCCACCTGCCCTTGCGCTTaGTTTAGCAGTGACTGCAGCATCAGGACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: WTWICRATCPCA*FSSDCSIRTCS
Trigger: GGAGCAGGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGAGCCACAGTCTGGACCTGGATCTGCCGGGCCACCTaGCCTTGCGCTTGCTTTAGCAGTGACTGCAGCATC +
Preference number: 6 (lower is better)
Translates to: RATVWTWICRAT*PCACFSSDCSI
Trigger: GATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCAGACTGTGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTCTCTTGGACCCTGGTCCACTGGGCCTGGGCACTGTaGAGCAGCTCTCTGATCTTGCTCACGGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: LSWTLVHWAWAL*SSSLILLTAAG
Trigger: TCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCACAGTGCCCAGGCCCAGTGGACCAGGGTCCAAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGGACCTTAGCGGGTGTTCCTGCTGCCAGCAGAGCTTaGTGGCCCATCTTAGTGGCCCGTTGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WTLAGVPAASRA*WPILVARCCSS
Trigger: GGAGCTGCAGCAACGGGCCACTAAGATGGGCCAGCAAGCTCTGCTGGCAGCAGGAACACCCGCTAAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CATCAGGGAGGTGTGCAGAGCCTGGCCCCGGCTCTCTaGCAGTTCCTTCACTTGAGCCCGGTGCTCCAACAT +
Preference number: 6 (lower is better)
Translates to: HQGGVQSLAPAL*QFLHLSPVLQH
Trigger: ATGTTGGAGCACCGGGCTCAAGTGAAGGAACTGGCAGAGAGCCGGGGCCAGGCTCTGCACACCTCCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CCAACATGTACTGGATTCTCACAGGGCTGCAGGGGGTaGCCTGTGTGGCCATCTCAGCCTGTAGTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: PTCTGFSQGCRG*PVWPSQPVVPG
Trigger: CCCGGGGACTACAGGCTGAGATGGCCACACAGGGCACCCCCTGCAGCCCTGTGAGAATCCAGTACATGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCTCCAAGGCCTGCTGTAGCTGCTGTTGCCGGCCCTaGCAGGATTCCCGCAAGCTACTCAACCCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: CSKACCSCCCRP*QDSRKLLNPCS
Trigger: AGAGCAGGGGTTGAGTAGCTTGCGGGAATCCTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CCCAGAAACAGCTGCTGCTCCAAGGCCTGCTGTAGCTaGTGTTGCCGGCCCTGCCAGGATTCCCGCAAGCTA +
Preference number: 6 (lower is better)
Translates to: PRNSCCSKACCS*CCRPCQDSRKL
Trigger: TAGCTTGCGGGAATCCTGGCAGGGCCGGCAACAGCAGCTACAGCAGGCCTTGGAGCAGCAGCTGTTTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CAGTGGCCTTCCTGGAGGCAGGCTTGGGACTGGCCCTaGAACTCTTGCACTTCCTTGGCCTGCCTGTCCATG +
Preference number: 6 (lower is better)
Translates to: QWPSWRQAWDWP*NSCTSLACLSM
Trigger: CATGGACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTaGCTGTATGAGCTTGTGCCCTGTACCTGTCACCAC +
Preference number: 6 (lower is better)
Translates to: HPGGHLFSGKVP*LYELVPCTCHH
Trigger: GTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCTGCACCCGGGCGGCCACCTCTTCAGTGGCAAAGTaGCCTGCCTGTATGAGCTTGTGCCCTGTACCTGTC +
Preference number: 6 (lower is better)
Translates to: CCTRAATSSVAK*PACMSLCPVPV
Trigger: GACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GCCTCTGTCTCTAAGCGGTTTAGAGCCACCTCCAGCTaGTGCACCCGGGCGGCCACCTCTTCAGTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: ASVSKRFRATSS*CTRAATSSVAK
Trigger: CTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTGGAGGTGGCTCTAAACCGCTTAGAGACAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GCAGGCTGCTGCCAGGTTCTCTGTACGGACTTTGATTaGCTTGTTCAGCCCCTCCCAAGCGGCCTGGACGCG +
Preference number: 6 (lower is better)
Translates to: AGCCQVLCTDFD*LVQPLPSGLDA
Trigger: CGCGTCCAGGCCGCTTGGGAGGGGCTGAACAAGGCAATCAAAGTCCGTACAGAGAACCTGGCAGCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCAGCAGGGCTTCCTTGGCAGACAGCAAAGCCGCACTaGCCCCAAACTCCTCCCTGTCCAAGGAGATGTGGG +
Preference number: 6 (lower is better)
Translates to: PAGLPWQTAKPH*PQTPPCPRRCG
Trigger: CCCACATCTCCTTGGACAGGGAGGAGTTTGGGGCCAGTGCGGCTTTGCTGTCTGCCAAGGAAGCCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGGAGGCCTCCTCCATCTGTAGCTCCTGATGCACGCTaGCCGCCCAGGAGGTATAGTCCCTCACCGCTGTGT +
Preference number: 6 (lower is better)
Translates to: RRPPPSVAPDAR*PPRRYSPSPLC
Trigger: ACACAGCGGTGAGGGACTATACCTCCTGGGCGGCCAGCGTGCATCAGGAGCTACAGATGGAGGAGGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GAGCTCCCCAGGCCACTGGCTTTTAGGAATGCCTCCTaGGCTGTGAGGACCTCCACTAGGTGGCCGCATTGC +
Preference number: 6 (lower is better)
Translates to: ELPRPLAFRNAS*AVRTSTRWPHC
Trigger: GCAATGCGGCCACCTAGTGGAGGTCCTCACAGCCCAGGAGGCATTCCTAAAAGCCAGTGGCCTGGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TACAGCGGCCAGGGTCTGGTGAATCTCAGAGGCCTGTaGGTAGCCAGATGCAAGCAGCCGCTGCCCCATGCT +
Preference number: 6 (lower is better)
Translates to: YSGQGLVNLRGL*VARCKQPLPHA
Trigger: AGCATGGGGCAGCGGCTGCTTGCATCTGGCTACCCACAGGCCTCTGAGATTCACCAGACCCTGGCCGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGCAAAAATGTCCGAAGCTTCCGCAGCTCCTCCAGCTaGTGTCCCCGGGCCCTCGCTTGCTCTGTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: CKNVRSFRSSSS*CPRALACSVSA
Trigger: GGCACTCACAGAGCAAGCGAGGGCCCGGGGACACCAGCTGGAGGAGCTGCGGAAGCTTCGGACATTTTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGGGCTCCCAGGAGTTCGCCCACTCTAGGCAGCGCCTaGCTTCTGACAGGGACTCTCAGCTCTGCTTCCATG +
Preference number: 6 (lower is better)
Translates to: WAPRSSPTLGSA*LLTGTLSSASM
Trigger: CATGGAAGCAGAGCTGAGAGTCCCTGTCAGAAGCCAGGCGCTGCCTAGAGTGGGCGAACTCCTGGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCTTTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTTaGGACTGGCCCTGCAACTCTTGCACTTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SLARQWPSWRQA*DWPCNSCTSLA
Trigger: GGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCCTGCATACACTCTGCCACCTCTGGGGACAGGAAGTaGCCGTTGTCCAGCAGCTGCTGCCCTTCGTGCCGT +
Preference number: 6 (lower is better)
Translates to: SCIHSATSGDRK*PLSSSCCPSCR
Trigger: ACGGCACGAAGGGCAGCAGCTGCTGGACAACGGCCACTTCCTGTCCCCAGAGGTGGCAGAGTGTATGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTGTGGGCATCATGCCAGCACTGGGCAGGGCAGTTGAGAGCGGCATaGGGCATGTGCTCAGCTGCCCATGTGAGCTCCAGGTTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LWASCQHWAGQLRAA*GMCSAAHVSSRLLR
Trigger: CCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAATGCCGCTCTCAACTGCCCTGCCCAGTGCTGGCATGATGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTCTTCCACATCTTTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTaGGGACTGGCCCTGCAACTCTTGCACTTCCTTGGCCTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: LFHIFGEAVAFLEAG*GLALQLLHFLGLPV
Trigger: GACAGGCAGGCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGATGTGGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CGGGCGGCCACCTCTTCAGTGGCAAAGTGCCCTGCCTGTATGAGCTaGTGCCCTGTACCTGTCACCACCTGGCTCAGAGCCTTGTGGCTA +
Preference number: 6 (lower is better)
Translates to: RAATSSVAKCPACMS*CPVPVTTWLRALWL
Trigger: TAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GCCGTTGTCCAGCAGCTGCTGCCCTTCGTGCCGTATGGTCTGGGCTaGAAGGCAGCGTTCCTGAATCTCTTGCTCCAGCGCCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: AVVQQLLPFVPYGLG*KAAFLNLLLQRLML
Trigger: CAGCATGAGGCGCTGGAGCAAGAGATTCAGGAACGCTGCCTTCAAGCCCAGACCATACGGCACGAAGGGCAGCAGCTGCTGGACAACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CTGGTGGACAAGATGAGTCACATGGGTCCTGTGGGCTaGCACCTGGGCCTCCAGCAGGTCATGGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LVDKMSHMGPVG*HLGLQQVMALQ
Trigger: CTGCAGAGCCATGACCTGCTGGAGGCCCAGGTGTCAGCCCACAGGACCCATGTGACTCATCTTGTCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GTGTGGAACCGGACCAGGAGATATCCTCGTTCCAATTaGGCCTTGCGCTGCTCCATGCGCAGCTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: VWNRTRRYPRSN*ALRCSMRSWRA
Trigger: GGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGTTCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGGGCTGACACCTGGGCCTCCAGCAGGTCATGGCTCTaGAGCAGCGACACTATTTCTGCCAGCTGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: WADTWASSRSWL*SSDTISASCCP
Trigger: TGGGCAACAGCTGGCAGAAATAGTGTCGCTGCTGCAGAGCCATGACCTGCTGGAGGCCCAGGTGTCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GGAGAGACAAGTCTGGATCCTTTCCATGTCCCCGTGTaGACCATGTGTGACACTAGGGCTGCGGCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: GETSLDPFHVPV*TMCDTRAAAAR
Trigger: GCGGGCTGCCGCAGCCCTAGTGTCACACATGGTGCACACGGGGACATGGAAAGGATCCAGACTTGTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ACAGTCTGGACCTGGATCTGCCGGGCCACCTGCCCTTaGGCTTGCTTTAGCAGTGACTGCAGCATCAGGACC +
Preference number: 6 (lower is better)
Translates to: TVWTWICRATCP*ACFSSDCSIRT
Trigger: GGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCAAGGGCAGGTGGCCCGGCAGATCCAGGTCCAGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CACTGGGCAGGGCAGTTGAGAGCGGCATTGGGCATGTaGTCAGCTGCCCATGTGAGCTCCAGGTTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: HWAGQLRAALGM*SAAHVSSRLLR
Trigger: CCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAATGCCGCTCTCAACTGCCCTGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ATGAACTCATGTAGTCTCAGGGTCCCCTCCAGCTCCTaGCCCCGTTCGTCTGCCAGCTTCCGTAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: MNSCSLRVPSSS*PRSSASFRSAC
Trigger: GCAGGCACTACGGAAGCTGGCAGACGAACGGGGGCAGGAGCTGGAGGGGACCCTGAGACTACATGAGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ACCGGACCAGGAGATATCCTCGTTCCAATTGAGCCTTaGGCTGCTCCATGCGCAGCTGGAGGGCCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: TGPGDILVPIEP*AAPCAAGGPPK
Trigger: CTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GGTTCGAAGCCCATCCTGGACCTTAGCGGGTGTTCCTaGTGCCAGCAGAGCTTGCTGGCCCATCTTAGTGGC +
Preference number: 6 (lower is better)
Translates to: GSKPILDLSGCS*CQQSLLAHLSG
Trigger: GCCACTAAGATGGGCCAGCAAGCTCTGCTGGCAGCAGGAACACCCGCTAAGGTCCAGGATGGGCTTCGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCTGTCTCTAAGCGGTTTAGAGCCACCTCCAGCTGCTaGACCCGGGCGGCCACCTCTTCAGTGGCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SVSKRFRATSSC*TRAATSSVAKC
Trigger: GCACTTTGCCACTGAAGAGGTGGCCGCCCGGGTGCAGCAGCTGGAGGTGGCTCTAAACCGCTTAGAGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTCTCCTGTATCCATCTCTGCAGCTCCGAGGCAGCCTaGTCAAAGCTCCGGAGATCGCAGGCTGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: FSCIHLCSSEAA*SKLRRSQAAAR
Trigger: CCTGGCAGCAGCCTGCGATCTCCGGAGCTTTGAGCAGGCTGCCTCGGAGCTGCAGAGATGGATACAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CGGCAGCTCCCAAGAAAGGTGTGGCCCTGGGTAGCCTaGAACAGCTTCTGGCTCCATTCCTGGACTTTGGCC +
Preference number: 6 (lower is better)
Translates to: RQLPRKVWPWVA*NSFWLHSWTLA
Trigger: GGCCAAAGTCCAGGAATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCTTGGGAGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ATCTCTTGCTCCAGCGCCTCATGCTGCTCAAGGAACTaGTTGGCCCCCACCACATCCCCAGCCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ISCSSASCCSRN*LAPTTSPACFS
Trigger: GGAGAAGCAGGCTGGGGATGTGGTGGGGGCCAAGCAGTTCCTTGAGCAGCATGAGGCGCTGGAGCAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CTGTCTTCCGCTGACACCAGACCAGCAGGGCTTCCTTaGCAGACAGCAAAGCCGCACTGGCCCCAAACTCCT +
Preference number: 6 (lower is better)
Translates to: LSSADTRPAGLP*QTAKPHWPQTP
Trigger: AGGAGTTTGGGGCCAGTGCGGCTTTGCTGTCTGCCAAGGAAGCCCTGCTGGTCTGGTGTCAGCGGAAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCCAGGCCCTCTCGAGGTAGGAATGGCCTTCGGTTTTaGGCTCGGAGTGTTGTCTGCAGCTGGAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PRPSRGRNGLRF*ARSVVCSWKSR
Trigger: CCTGCTCTTCCAGCTGCAGACAACACTCCGAGCCCAAAACCGAAGGCCATTCCTACCTCGAGAGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGCAGCAGCTCTCTGATCTTGCTCACGGCAGCTGGATaGCTCAGAAGCAGCTTCTCACCGCGTGCACGGAGG +
Preference number: 6 (lower is better)
Translates to: CSSSLILLTAAG*LRSSFSPRARR
Trigger: CCTCCGTGCACGCGGTGAGAAGCTGCTTCTGAGCCATCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCAACTCGCGTTCCAGCCTCTCATGTCTCTGGAGCTaGTTCTCTACCCCACACAGGTCCTGGGCCACATCG +
Preference number: 6 (lower is better)
Translates to: ANSRSSLSCLWS*FSTPHRSWATS
Trigger: CGATGTGGCCCAGGACCTGTGTGGGGTAGAGAACCAGCTCCAGAGACATGAGAGGCTGGAACGCGAGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ATGCCTGCCAACTCGCGTTCCAGCCTCTCATGTCTCTaGAGCTGGTTCTCTACCCCACACAGGTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: MPANSRSSLSCL*SWFSTPHRSWA
Trigger: GGCCCAGGACCTGTGTGGGGTAGAGAACCAGCTCCAGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGCTCTGTGAGTGCCTCTGTCCTCAGGAGCAGGGCCTaGCATCTGTCCAGGATGCTACGCGCCTCAGAGTGT +
Preference number: 6 (lower is better)
Translates to: CSVSASVLRSRA*HLSRMLRASEC
Trigger: ACACTCTGAGGCGCGTAGCATCCTGGACAGATGCCAGGCCCTGCTCCTGAGGACAGAGGCACTCACAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTCTGCAACTGTGTTTGCATCGTGGCTGGGTCCTGCTaGCCCTCATCCAGAGCCGCCAGGCTCTTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: FCNCVCIVAGSC*PSSRAARLFSL
Trigger: GAGGGAGAAGAGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGCTCTTCCACATCTTTGGCGAGGCAGTGGCCTTCCTaGAGGCAGGCTTGGGACTGGCCCTGCAACTCTTGC +
Preference number: 6 (lower is better)
Translates to: CSSTSLARQWPS*RQAWDWPCNSC
Trigger: GCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGATGTGGAAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCAGCGTCCTGGCCCAGGTCCTCACTGTCCAGAATATaGTCCCGTTCAGCCAGCCAGGATCCTGCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SASWPRSSLSRI*SRSASQDPASR
Trigger: CCTGGAAGCAGGATCCTGGCTGGCTGAACGGGACCATATTCTGGACAGTGAGGACCTGGGCCAGGACGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GTCCATAGTCCTGAGACTCAGCGACGGCCAGCTTGGTaGTCAGCCAGGCATCCAGGAGCAAGGCCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: VHSPETQRRPAW*SARHPGARPLA
Trigger: AGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTCGCTGAGTCTCAGGACTATGGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCTGTCCATAGTCCTGAGACTCAGCGACGGCCAGCTTaGTGGTCAGCCAGGCATCCAGGAGCAAGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: PVHSPETQRRPA*WSARHPGARPL
Trigger: AAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAGCTGGCCGTCGCTGAGTCTCAGGACTATGGACAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GAGGGCCTCCCAAGCTTGGGTCACAGCTTGCTGCTTTaGCTGGACAGCGGCAAGGGCCTGAGTTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: EGLPSLGHSLLL*LDSGKGLSSWT
Trigger: TGTCCAGGAACTCAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGTGACCCAAGCTTGGGAGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp ATCTTTGGCGAGGCAGTGGCCTTCCTGGAGGCAGGCTaGGGACTGGCCCTGCAACTCTTGCACTTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: IFGEAVAFLEAG*GLALQLLHFLG
Trigger: GCCAAGGAAGTGCAAGAGTTGCAGGGCCAGTCCCAAGCCTGCCTCCAGGAAGGCCACTGCCTCGCCAAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CTTGGTGGTCAGCCAGGCATCCAGGAGCAAGGCCTCTaGCTCCAGCTGGTACAGGTGCAGCTGTTCACGCAG +
Preference number: 6 (lower is better)
Translates to: LGGQPGIQEQGL*LQLVQVQLFTQ
Trigger: CTGCGTGAACAGCTGCACCTGTACCAGCTGGAGCAAGAGGCCTTGCTCCTGGATGCCTGGCTGACCACCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CCCCTCCCAAGCGGCCTGGACGCGACACTTCTGAGCTaGAATCTGGGGGTAGAACCTGGGTGCTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: PLPSGLDATLLS*NLGVEPGCSSF
Trigger: GAAAGAGGAGCACCCAGGTTCTACCCCCAGATTCAAGCTCAGAAGTGTCGCGTCCAGGCCGCTTGGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CAGCAGCTGCTGCCCTTCGTGCCGTATGGTCTGGGCTaGAAGGCAGCGTTCCTGAATCTCTTGCTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: QQLLPFVPYGLG*KAAFLNLLLQR
Trigger: GCGCTGGAGCAAGAGATTCAGGAACGCTGCCTTCAAGCCCAGACCATACGGCACGAAGGGCAGCAGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp ATACACTCTGCCACCTCTGGGGACAGGAAGTGGCCGTaGTCCAGCAGCTGCTGCCCTTCGTGCCGTATGGTC +
Preference number: 6 (lower is better)
Translates to: IHSATSGDRKWP*SSSCCPSCRMV
Trigger: GACCATACGGCACGAAGGGCAGCAGCTGCTGGACAACGGCCACTTCCTGTCCCCAGAGGTGGCAGAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp AGCCGAGCCCGTCACTCCAGCTTCGGGAGAAGTCAGTaGTGTCCACATTGGTGTAGCCGGCTGTCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: SRARHSSFGRSQ*CPHWCSRLSSA
Trigger: AGCGGAAGACAGCCGGCTACACCAATGTGGACATCACTGACTTCTCCCGAAGCTGGAGTGACGGGCTCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp ACAGCTTGCTGCTTTTGCTGGACAGCGGCAAGGGCCTaGGTTCCTGGACACAGCTCCTGCACTCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: TACCFCWTAARA*VPGHSSCTLPP
Trigger: TGGAGGCAGAGTGCAGGAGCTGTGTCCAGGAACTCAGGCCCTTGCCGCTGTCCAGCAAAAGCAGCAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp AGAGCCTGGCCCCGGCTCTCTGCCAGTTCCTTCACTTaGGCCCGGTGCTCCAACATGTGGCAAAACAGGTTC +
Preference number: 6 (lower is better)
Translates to: RAWPRLSASSFT*ARCSNMWQNRF
Trigger: GAACCTGTTTTGCCACATGTTGGAGCACCGGGCTCAAGTGAAGGAACTGGCAGAGAGCCGGGGCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CGGCCACCTCTTCAGTGGCAAAGTGCCCTGCCTGTATaGGCTTGTGCCCTGTACCTGTCACCACCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: RPPLQWQSALPV*ACALYLSPPGS
Trigger: TGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGCAGGGCACTTTGCCACTGAAGAGGTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GATCGCAGGCTGCTGCCAGGTTCTCTGTACGGACTTTaGTTGCCTTGTTCAGCCCCTCCCAAGCGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: DRRLLPGSLYGL*LPCSAPPKRPG
Trigger: TCCAGGCCGCTTGGGAGGGGCTGAACAAGGCAATCAAAGTCCGTACAGAGAACCTGGCAGCAGCCTGCGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GTAGGTCATGATGGAGCACTCATCTGGATGCAGGGCTaGCACATCCTCAGGGTCGAGCAGCTGGGCAATGCC +
Preference number: 6 (lower is better)
Translates to: VGHDGALIWMQG*HILRVEQLGNA
Trigger: GGCATTGCCCAGCTGCTCGACCCTGAGGATGTGGCAGCCCTGCATCCAGATGAGTGCTCCATCATGACCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGGTCCTTCCCGCAGGATGCGCTCTCTAGTTGTTTCTaGCGCTGGAAAAGCCAGGAAGCTGCTTCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: WSFPQDALSSCF*RWKSQEAASAE
Trigger: CTCGGCCGAAGCAGCTTCCTGGCTTTTCCAGCGGCAGAAACAACTAGAGAGCGCATCCTGCGGGAAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGCGCTTGCTTTAGCAGTGACTGCAGCATCAGGACCTaGTCCCAAAGCAGCCTGCTCTCTGGGGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: CACFSSDCSIRT*SQSSLLSGEPD
Trigger: GTCAGGCTCCCCAGAGAGCAGGCTGCTTTGGGAGCAGGTCCTGATGCTGCAGTCACTGCTAAAGCAAGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AACTTCTGCTGTCTCTGCTCCCACAGAGCCTTCAGCTaGTGGCTGTGCTGGCCTAGGAGCCTTAGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: NFCCLCSHRAFS*WLCWPRSLRAL
Trigger: CAGCGCTCTAAGGCTCCTAGGCCAGCACAGCCAGCAGCTGAAGGCTCTGTGGGAGCAGAGACAGCAGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GCCTGTTGCAGGCAGTGTGCACGTTCTTCACACGCCTaGTCCAGTCCTGCCCAGTGGCTTTCTAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ACCRQCARSSHA*SSPAQWLSSFW
Trigger: CCAGAAGCTAGAAAGCCACTGGGCAGGACTGGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GTACTGCTGGACAGTGACAGCCTGTTGCAGGCAGTGTaGACGTTCTTCACACGCCTGCTCCAGTCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: VLLDSDSLLQAV*TFFTRLLQSCP
Trigger: TGGGCAGGACTGGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GATATCCTCGTTCCAATTGAGCCTTGCGCTGCTCCATaGGCAGCTGGAGGGCCTCCCAAGCTTGGGTCACAG +
Preference number: 6 (lower is better)
Translates to: DILVPIEPCAAP*AAGGPPKLGSQ
Trigger: CTGTGACCCAAGCTTGGGAGGCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTTGCTaGCCTGACAAAGTTGCCTATCATCAGGGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: DPLLDPVLSLGC*PDKVAYHQGGV
Trigger: CACACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTGGACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTTaGTGCCCTGACAAAGTTGCCTATCATCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: LDPLLDPVLSLG*CPDKVAYHQGG
Trigger: ACCTCCCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCCTTTAGATTCCCAAGAGGGCTCCAGGCTCTCAGTTaGTGGACCCGCTGCTGGATCCAGTCCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: SFRFPRGLQALS*WTRCWIQSSAW
Trigger: CCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTGAGAGCCTGGAGCCCTCTTGGGAATCTAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GGTCTGGTGAATCTCAGAGGCCTGTGGGTAGCCAGATaGAAGCAGCCGCTGCCCCATGCTTTGGACCAGGTT +
Preference number: 6 (lower is better)
Translates to: GLVNLRGLWVAR*KQPLPHALDQV
Trigger: AACCTGGTCCAAAGCATGGGGCAGCGGCTGCTTGCATCTGGCTACCCACAGGCCTCTGAGATTCACCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ACTGTGCAGCAGCTCTCTGATCTTGCTCACGGCAGCTaGATGGCTCAGAAGCAGCTTCTCACCGCGTGCACG +
Preference number: 6 (lower is better)
Translates to: TVQQLSDLAHGS*MAQKQLLTACT
Trigger: CGTGCACGCGGTGAGAAGCTGCTTCTGAGCCATCCAGCTGCCGTGAGCAAGATCAGAGAGCTGCTGCACAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGGAAGCCTGTATATCCTGCTGCCTCTGGTGAGCCTTaGGGGCAGCACTGTGCCCACGCTCTTGTAGGCTCT +
Preference number: 6 (lower is better)
Translates to: RKPVYPAASGEP*GQHCAHALVGS
Trigger: AGAGCCTACAAGAGCGTGGGCACAGTGCTGCCCCCAAGGCTCACCAGAGGCAGCAGGATATACAGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CAGAGCCGGCCAATCCTACCTTCAAGAGACTCCACCTaGGTCTGGATGAGGCCCATCTCCTGCTGCAGCACT +
Preference number: 6 (lower is better)
Translates to: QSRPILPSRDST*VWMRPISCCST
Trigger: AGTGCTGCAGCAGGAGATGGGCCTCATCCAGACCCAGGTGGAGTCTCTTGAAGGTAGGATTGGCCGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ATTCTGCTGCTTCTGCAACTGTGTTTGCATCGTGGCTaGGTCCTGCTGGCCCTCATCCAGAGCCGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ILLLLQLCLHRG*VLLALIQSRQA
Trigger: AGCCTGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGCAATTCCCGGCAGCTCCCAAGAAAGGTGTGGCCCTaGGTAGCCTGCAACAGCTTCTGGCTCCATTCCTGG +
Preference number: 6 (lower is better)
Translates to: SNSRQLPRKVWP*VACNSFWLHSW
Trigger: CCAGGAATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCTTGGGAGCTGCCGGGAATTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CACGCTAGCAATTCCCGGCAGCTCCCAAGAAAGGTGTaGCCCTGGGTAGCCTGCAACAGCTTCTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: HASNSRQLPRKV*PWVACNSFWLH
Trigger: ATGGAGCCAGAAGCTGTTGCAGGCTACCCAGGGCCACACCTTTCTTGGGAGCTGCCGGGAATTGCTAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp ATCTTGCTGGCCAGTGCCTGGCTCTTGTCCTCTAGCTaGCAATGCTGTCTCTGCAGCCTCCGGCTGGAGCAC +
Preference number: 6 (lower is better)
Translates to: ILLASAWLLSSS*QCCLCSLRLEH
Trigger: GTGCTCCAGCCGGAGGCTGCAGAGACAGCATTGCAAGCTAGAGGACAAGAGCCAGGCACTGGCCAGCAAGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGTGTGGAACCGGACCAGGAGATATCCTCGTTCCAATaGAGCCTTGCGCTGCTCCATGCGCAGCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: CVEPDQEISSFQ*SLALLHAQLEG
Trigger: GCCCTCCAGCTGCGCATGGAGCAGCGCAAGGCTCAATTGGAACGAGGATATCTCCTGGTCCGGTTCCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CCGAAGGCTCTGAAACCTCTGAAGCAGCTGCCGGGCTaGCTCTTCCACATCTTTGGCGAGGCAGTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PKALKPLKQLPG*LFHIFGEAVAF
Trigger: GAAGGCCACTGCCTCGCCAAAGATGTGGAAGAGCAAGCCCGGCAGCTGCTTCAGAGGTTTCAGAGCCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp AGATCGCAGGCTGCTGCCAGGTTCTCTGTACGGACTTaGATTGCCTTGTTCAGCCCCTCCCAAGCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RSQAAARFSVRT*IALFSPSQAAW
Trigger: CCAGGCCGCTTGGGAGGGGCTGAACAAGGCAATCAAAGTCCGTACAGAGAACCTGGCAGCAGCCTGCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TCTTGCTCCAGCGCCTCATGCTGCTCAAGGAACTGCTaGGCCCCCACCACATCCCCAGCCTGCTTCTCCTTA +
Preference number: 6 (lower is better)
Translates to: SCSSASCCSRNC*APTTSPACFSL
Trigger: TAAGGAGAAGCAGGCTGGGGATGTGGTGGGGGCCAAGCAGTTCCTTGAGCAGCATGAGGCGCTGGAGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CCGTTGCTGCAGCTCCTCCTTGGCTTTCAGTTCTGCCCACAGCCATaGATGGGCTCTGAGCCTGAGCAAAAGGCTGTGGGGTTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: PLLQLLLGFQFCPQP*MGSEPEQKAVGFPG
Trigger: TCCTGGGAACCCCACAGCCTTTTGCTCAGGCTCAGAGCCCATCAATGGCTGTGGGCAGAACTGAAAGCCAAGGAGGAGCTGCAGCAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TTGCCTGAGGAGGTGCTGTTCTTGAAGCATGGCCTGCAGCTTCTCTaGCTTGAGTGCCCAGGCCTGGAACACTTGGTCGCGTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LPEEVLFLKHGLQLL*LECPGLEHLVAFLL
Trigger: CAGGAGGAACGCGACCAAGTGTTCCAGGCCTGGGCACTCAAGCAAGAGAAGCTGCAGGCCATGCTTCAAGAACAGCACCTCCTCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp AGAGGCCTGTGGGTAGCCAGATGCAAGCAGCCGCTGCCCCATGCTTaGGACCAGGTTAAGGCTCTCTGTTCGGATGTCCAGCTCAACCTT +
Preference number: 6 (lower is better)
Translates to: RGLWVARCKQPLPHA*DQVKALCSDVQLNL
Trigger: AAGGTTGAGCTGGACATCCGAACAGAGAGCCTTAACCTGGTCCAAAGCATGGGGCAGCGGCTGCTTGCATCTGGCTACCCACAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GCTCCTCTTTCTAGGGAAGCCATCCGCTCCCTCAGGGTCTGCATCTaGGCCTGGCCCAGGCTCTGGACTTCTCTGTTGAAAGCACCAAAC +
Preference number: 6 (lower is better)
Translates to: APLSREAIRSLRVCI*AWPRLWTSLLKAPN
Trigger: GTTTGGTGCTTTCAACAGAGAAGTCCAGAGCCTGGGCCAGGCCAAGATGCAGACCCTGAGGGAGCGGATGGCTTCCCTAGAAAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp ATCTCCTTCTGCCTGCGGGCCATATCCGCCCAGCTGTaGTACTCTTCCTGCCGGAGGATGTCTGCCATCTCA +
Preference number: 6 (lower is better)
Translates to: ISFCLRAISAQL*YSSCRRMSAIS
Trigger: TGAGATGGCAGACATCCTCCGGCAGGAAGAGTATCACAGCTGGGCGGATATGGCCCGCAGGCAGAAGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp TCCAGAGCCTTGTGTTTCTGCAGAGCAGTAGCGATCTaGGTGAGGTCCCGGTCCAGGACCGCGGTCTCCATT +
Preference number: 6 (lower is better)
Translates to: SRALCFCRAVAI*VRSRSRTAVSI
Trigger: AATGGAGACCGCGGTCCTGGACCGGGACCTCACTCAGATCGCTACTGCTCTGCAGAAACACAAGGCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GCTGGTGTTGGGTGGCTAGCTTGCTCTGCAGGGACTTaGACCTCTGGTGACACTTCTGGCTCTCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: AGVGWLACSAGT*TSGDTSGSPPG
Trigger: TCCTGGAGGAGAGCCAGAAGTGTCACCAGAGGTTCAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CCTTTCACCTCAGCCTGGAGCATCTTGTGCTTTCGTTaGAGGCTGTGGGCATCATGCCAGCACTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PFTSAWSILCFR*RLWASCQHWAG
Trigger: CCCTGCCCAGTGCTGGCATGATGCCCACAGCCTTCAACGAAAGCACAAGATGCTCCAGGCTGAGGTGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CCCAGTGCCACTTGGCACTTCTGCCTTCCTCATATCTaGGAATGGGCTCGAGGCTCCCCTTGCCAAGATCCC +
Preference number: 6 (lower is better)
Translates to: PSATWHFCLPHI*EWARGSPCQDP
Trigger: GGGATCTTGGCAAGGGGAGCCTCGAGCCCATTCTCAGATATGAGGAAGGCAGAAGTGCCAAGTGGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCCTCAGGGTCGAGCAGCTGGGCAATGCCAAGCTGCTaGTCAGCCACTCGGAAGGCAAAGGAGAGGTTATAC +
Preference number: 6 (lower is better)
Translates to: SSGSSSWAMPSC*SATRKAKERLY
Trigger: GTATAACCTCTCCTTTGCCTTCCGAGTGGCTGAGCAGCAGCTTGGCATTGCCCAGCTGCTCGACCCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CCTGCAGCAGACTCAGCACAGCCTTTGAGTCTTCCATaGGCTTCCTCTCCTCCTGTAGACACCGTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: PAADSAQPLSLP*ASSPPVDTVGA
Trigger: GGCTCCTACGGTGTCTACAGGAGGAGAGGAAGCGCATGGAAGACTCAAAGGCTGTGCTGAGTCTGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGCCTTCATCAGTTCCTGCACCTGCTGCTCCATGCCTaGCAACTCGCGTTCCAGCCTCTCATGTCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SLHQFLHLLLHA*QLAFQPLMSLE
Trigger: CTCCAGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCATGGAGCAGCAGGTGCAGGAACTGATGAAGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTCCAGCCTTCATCAGTTCCTGCACCTGCTGCTCCATaGCTGCCAACTCGCGTTCCAGCCTCTCATGTCTCT +
Preference number: 6 (lower is better)
Translates to: LQPSSVPAPAAP*LPTRVPASHVS
Trigger: AGAGACATGAGAGGCTGGAACGCGAGTTGGCAGGCATGGAGCAGCAGGTGCAGGAACTGATGAAGGCTGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTCCTGCAGATGTCTTTCCAGCTCCTGCATACACTCTaGCACCTCTGGGGACAGGAAGTGGCCGTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: LLQMSFQLLHTL*HLWGQEVAVVQ
Trigger: CTGGACAACGGCCACTTCCTGTCCCCAGAGGTGGCAGAGTGTATGCAGGAGCTGGAAAGACATCTGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCGGAAGGCAAAGGAGAGGTTATACAGAGGGCGGTCTaGACTCAGCGAGCCATAATCCAGCAGGTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SEGKGEVIQRAV*TQRAIIQQVRP
Trigger: AGGCCGGACCTGCTGGATTATGGCTCGCTGAGTCCAGACCGCCCTCTGTATAACCTCTCCTTTGCCTTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGTTCCCTGCACTGCTTCTGCCCTTTCCAGTGGATCTaGCTGTGTCAGGGGCTCTCTGACACTGAAGTTGCG +
Preference number: 6 (lower is better)
Translates to: GSLHCFCPFQWI*LCQGLSDTEVA
Trigger: CGCAACTTCAGTGTCAGAGAGCCCCTGACACAGCCAGATCCACTGGAAAGGGCAGAAGCAGTGCAGGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CTGCCAGGTTCCCTGCACTGCTTCTGCCCTTTCCAGTaGATCTGGCTGTGTCAGGGGCTCTCTGACACTGAA +
Preference number: 6 (lower is better)
Translates to: LPGSLHCFCPFQ*IWLCQGLSDTE
Trigger: TTCAGTGTCAGAGAGCCCCTGACACAGCCAGATCCACTGGAAAGGGCAGAAGCAGTGCAGGGAACCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CGCCACTTGAGTTTCTGCAGAATGTTGCTTCCTGCTTaGGAGCGCTCATCAGCCACCCTGGGCCACTTCTCC +
Preference number: 6 (lower is better)
Translates to: RHLSFCRMLLPA*ERSSATLGHFS
Trigger: GGAGAAGTGGCCCAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GTGATTTCGGCGTCATTGAGCAGACGGCTTCGGGCCTaGGTCAACTGGCACAGTTCAGACCAGGAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: VISASLSRRLRA*VNWHSSDQEAC
Trigger: ACAGGCTTCCTGGTCTGAACTGTGCCAGTTGACCCAGGCCCGAAGCCGTCTGCTCAATGACGCCGAAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGCTTCTCTTGCTTGAGTGCCCAGGCCTGGAACACTTaGTCGCGTTCCTCCTGTAGGGTTCGAAGCCCATCC +
Preference number: 6 (lower is better)
Translates to: SFSCLSAQAWNT*SRSSCRVRSPS
Trigger: GGATGGGCTTCGAACCCTACAGGAGGAACGCGACCAAGTGTTCCAGGCCTGGGCACTCAAGCAAGAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ATGGCCTGCAGCTTCTCTTGCTTGAGTGCCCAGGCCTaGAACACTTGGTCGCGTTCCTCCTGTAGGGTTCGA +
Preference number: 6 (lower is better)
Translates to: MACSFSCLSAQA*NTWSRSSCRVR
Trigger: TCGAACCCTACAGGAGGAACGCGACCAAGTGTTCCAGGCCTGGGCACTCAAGCAAGAGAAGCTGCAGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGTTGCTGGACCCGCTGCTGGATCCAGTCCTCAGCCTaGGTTGCTGCCCTGACAAAGTTGCCTATCATCAGG +
Preference number: 6 (lower is better)
Translates to: SCWTRCWIQSSA*VAALTKLPIIR
Trigger: CCTGATGATAGGCAACTTTGTCAGGGCAGCAACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTTAGATTCCCAAGAGGGCTCCAGGCTCTCAGTTGCTaGACCCGCTGCTGGATCCAGTCCTCAGCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: FRFPRGLQALSC*TRCWIQSSAWV
Trigger: AACCCAGGCTGAGGACTGGATCCAGCAGCGGGTCCAGCAACTGAGAGCCTGGAGCCCTCTTGGGAATCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGGAACTCCTGGAAGTTGTATCTGTTCTCTAGGGCCTaGCCCTGCAGGGTCACTGCCTGCCTCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RNSWKLYLFSRA*PCRVTACLSFS
Trigger: GGAGAAGCTGAGGCAGGCAGTGACCCTGCAGGGCCAGGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGAAATTCTGCTGCTTCTGCAACTGTGTTTGCATCGTaGCTGGGTCCTGCTGGCCCTCATCCAGAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: GNSAASATVFAS*LGPAGPHPEPP
Trigger: TGGCGGCTCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GCGCCACTTGAGTTTCTGCAGAATGTTGCTTCCTGCTaGGGAGCGCTCATCAGCCACCCTGGGCCACTTCTC +
Preference number: 6 (lower is better)
Translates to: APLEFLQNVASC*GALISHPGPLL
Trigger: GAGAAGTGGCCCAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp AGGTCTCCGTGGACTCTAAGAGTGATTTCGGCGTCATaGAGCAGACGGCTTCGGGCCTGGGTCAACTGGCAC +
Preference number: 6 (lower is better)
Translates to: RSPWTLRVISAS*SRRLRAWVNWH
Trigger: GTGCCAGTTGACCCAGGCCCGAAGCCGTCTGCTCAATGACGCCGAAATCACTCTTAGAGTCCACGGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGGGTAGCCAGATGCAAGCAGCCGCTGCCCCATGCTTaGGACCAGGTTAAGGCTCTCTGTTCGGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: WVARCKQPLPHA*DQVKALCSDVQ
Trigger: CTGGACATCCGAACAGAGAGCCTTAACCTGGTCCAAAGCATGGGGCAGCGGCTGCTTGCATCTGGCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TCTTGCTGCTTATGTCTGAGGCTGTGGGCAACCTCGGGACTTTCCTaGCAGAGCCGGCCAATCCTACCTTCAAGAGACTCCACCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SCCLCLRLWATSGLS*QSRPILPSRDSTWV
Trigger: GACCCAGGTGGAGTCTCTTGAAGGTAGGATTGGCCGGCTCTGCAAGGAAAGTCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GACCTGCTCCCAAAGCAGCCTGCTCTCTGGGGAGCCTaGCTCCATCACCTCTATGGTTGCTCTTTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: DLLPKQPALWGA*LHHLYGCSLEV
Trigger: TACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCAGGCTGCTTTGGGAGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GTGGCTAGCTTGCTCTGCAGGGACTTGAACCTCTGGTaGCACTTCTGGCTCTCCTCCAGGATGGTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: VASLLCRDLNLW*HFWLSSRMVQE
Trigger: TTCCTGGACCATCCTGGAGGAGAGCCAGAAGTGTCACCAGAGGTTCAAGTCCCTGCAGAGCAAGCTAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp AGCTCCTCCTTGGCTTTCAGTTCTGCCCACAGCCATTaGTGGGCTCTGAGCCTGAGCAAAAGGCTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: SSSLAFSSAHSH*WALSLSKRLWG
Trigger: ACCCCACAGCCTTTTGCTCAGGCTCAGAGCCCATCAATGGCTGTGGGCAGAACTGAAAGCCAAGGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp ACTAGGTGGCCGCATTGCCTGAGGAGGTGCTGTTCTTaGAGCATGGCCTGCAGCTTCTCTTGCTTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: TRWPHCLRRCCS*SMACSFSCLSA
Trigger: GGCACTCAAGCAAGAGAAGCTGCAGGCCATGCTTCAAGAACAGCACCTCCTCAGGCAATGCGGCCACCTAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTGTATTGTGCCTGCAATACCTCCGTCTCCTGCAGCTaGAGCAGGATCTTAGCCAGTCTCCTCTGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: LYCACNTSVSCS*SRILASLLWAV
Trigger: CACGGCCCAGAGGAGACTGGCTAAGATCCTGCTGCAGCTGCAGGAGACGGAGGTATTGCAGGCACAATACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CAGCAGGTCATGGCTCTGCAGCAGCGACACTATTTCTaGCAGCTGTTGCCCATAGACTGTGGAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: QQVMALQQRHYF*QLLPIDCGAGQ
Trigger: TTGGCCAGCTCCACAGTCTATGGGCAACAGCTGGCAGAAATAGTGTCGCTGCTGCAGAGCCATGACCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GTCAGGGGCTCTCTGACACTGAAGTTGCGTCCTCTCTaGATGAGATCTACACACACTGCCTGGTGGCGATGG +
Preference number: 6 (lower is better)
Translates to: VRGSLTLKLRPL*MRSTHTAWWRW
Trigger: CCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAACTTCAGTGTCAGAGAGCCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGAGACTCCACCTGGGTCTGGATGAGGCCCATCTCCTaGTGCAGCACTTTCTGTCTCCATGATAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: RDSTWVWMRPIS*CSTFCLHDSLC
Trigger: GCAGAGGCTATCATGGAGACAGAAAGTGCTGCAGCAGGAGATGGGCCTCATCCAGACCCAGGTGGAGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AATGCACGGATCTTTTCGGCCTGGGCCTTCAGGCCCTaGTCATGCCTCTTGAGCTTTGACAGAAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: NARIFSAWAFRP*SCLLSFDRRVS
Trigger: GGAGACCCTTCTGTCAAAGCTCAAGAGGCATGAGCAGGGCCTGAAGGCCCAGGCCGAAAAGATCCGTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGGTGGGCACCGTCAGCAAACTCTGTGTACAGGTTCTaGATCCTGATGCCCACCCGTCCTAGTCGGAAGATG +
Preference number: 6 (lower is better)
Translates to: RWAPSANSVYRF*ILMPTRPSRKM
Trigger: CATCTTCCGACTAGGACGGGTGGGCATCAGGATCCAGAACCTGTACACAGAGTTTGCTGACGGTGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCTCCCCAGAGATAAGCTCCAATAGCCGCAGTAGGTaGGCACCGTCAGCAAACTCTGTGTACAGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: ASPEISSNSRSR*APSANSVYRFW
Trigger: CCAGAACCTGTACACAGAGTTTGCTGACGGTGCCCACCTACTGCGGCTATTGGAGCTTATCTCTGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GTACTGAGACAGGTAGGTCATGATGGAGCACTCATCTaGATGCAGGGCTGCCACATCCTCAGGGTCGAGCAG +
Preference number: 6 (lower is better)
Translates to: VLRQVGHDGALI*MQGCHILRVEQ
Trigger: CTGCTCGACCCTGAGGATGTGGCAGCCCTGCATCCAGATGAGTGCTCCATCATGACCTACCTGTCTCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GGGCCTTCTCCTAGAAAGCCCAGGGCAGATAGCACCTaGGGTTTCTTCTCGATGCTGTGGATGATGGCCATC +
Preference number: 6 (lower is better)
Translates to: GPSPRKPRADST*GFFSMLWMMAI
Trigger: GATGGCCATCATCCACAGCATCGAGAAGAAACCCCAGGTGCTATCTGCCCTGGGCTTTCTAGGAGAAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCACGTTCTTCACACGCCTGCTCCAGTCCTGCCCAGTaGCTTTCTAGCTTCTGGCACTGTTCCACGATATGC +
Preference number: 6 (lower is better)
Translates to: ARSSHACSSPAQ*LSSFWHCSTIC
Trigger: GCATATCGTGGAACAGTGCCAGAAGCTAGAAAGCCACTGGGCAGGACTGGAGCAGGCGTGTGAAGAACGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CAGGTCTCTGCTAGGTCCACTCTCTGCAGGAACTCCTaGAAGTTGTATCTGTTCTCTAGGGCCTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: QVSARSTLCRNS*KLYLFSRAWPC
Trigger: GCAGGGCCAGGCCCTAGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAGAGTGGACCTAGCAGAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CGGCCAATCCTACCTTCAAGAGACTCCACCTGGGTCTaGATGAGGCCCATCTCCTGCTGCAGCACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: RPILPSRDSTWV*MRPISCCSTFC
Trigger: ACAGAAAGTGCTGCAGCAGGAGATGGGCCTCATCCAGACCCAGGTGGAGTCTCTTGAAGGTAGGATTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ACTTCATGGCCCACATCCAGCAACTCCCTCCACTTCTaGGCTTTGCTCCAGACCTTCCACCAGCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: TSWPTSSNSLHF*ALLQTFHQLSI
Trigger: GATGGACAGCTGGTGGAAGGTCTGGAGCAAAGCCCAGAAGTGGAGGGAGTTGCTGGATGTGGGCCATGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp ATGGCTCTGCAGCAGCGACACTATTTCTGCCAGCTGTaGCCCATAGACTGTGGAGCTGGCCAACACCTGCAG +
Preference number: 6 (lower is better)
Translates to: MALQQRHYFCQL*PIDCGAGQHLQ
Trigger: CTGCAGGTGTTGGCCAGCTCCACAGTCTATGGGCAACAGCTGGCAGAAATAGTGTCGCTGCTGCAGAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CTCAGCCTGGAAATTCTGCTGCTTCTGCAACTGTGTTaGCATCGTGGCTGGGTCCTGCTGGCCCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: LSLEILLLLQLC*HRGWVLLALIQ
Trigger: CTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTTCCAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TCCAGTTCCTTCAGCATTCTCTGCAGATGCAGGACCTaGAGGGCCCCCTGTAGTCTGGCCATCTTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SSSFSILCRCRT*RAPCSLAIFLW
Trigger: CCAGAGGAAGATGGCCAGACTACAGGGGGCCCTCAAGGTCCTGCATCTGCAGAGAATGCTGAAGGAACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTTTCCAGTGGATCTGGCTGTGTCAGGGGCTCTCTGACACTGAAGTaGCGTCCTCTCTGCATGAGATCTACACACACTGCCTGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: LSSGSGCVRGSLTLK*RPLCMRSTHTAWWR
Trigger: TCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAACTTCAGTGTCAGAGAGCCCCTGACACAGCCAGATCCACTGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp ACTTCCAGAAGGTCTCCGTGGACTCTAAGAGTGATTTCGGCGTCATaGAGCAGACGGCTTCGGGCCTGGGTCAACTGGCACAGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: TSRRSPWTLRVISAS*SRRLRAWVNWHSSD
Trigger: GTCTGAACTGTGCCAGTTGACCCAGGCCCGAAGCCGTCTGCTCAATGACGCCGAAATCACTCTTAGAGTCCACGGAGACCTTCTGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GTCCTGGACATCTCTGCTTCAGTTGTTCAGCAGTGTTaGTGGCCTCTGCCCAGTGGCCTTTTCCAGTGGCCA +
Preference number: 6 (lower is better)
Translates to: VLDISASVVQQC*WPLPSGLFQWP
Trigger: TGGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp TCCAGGATGGTCCAGGAAGTGAATGCATTGTGGGTCTaGGAGATGAGGGCATCCATCTTGCTGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SRMVQEVNALWV*EMRASILLASA
Trigger: GGCACTGGCCAGCAAGATGGATGCCCTCATCTCTCAGACCCACAATGCATTCACTTCCTGGACCATCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp TGGGCCACATCGTTAGGGAGGCTTGTGGCTTTCTCCTaGATCTGGGTAAGGACTTCCAGAAGGTCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: WATSLGRLVAFS*IWVRTSRRSPW
Trigger: CCACGGAGACCTTCTGGAAGTCCTTACCCAGATTCAGGAGAAAGCCACAAGCCTCCCTAACGATGTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CACAGCATTAGGCCTTCTTCAGCCTGCTTCCATTCCTaGAATTGGAGGGAAGCCAGCAGCTGGACCCTTCTC +
Preference number: 6 (lower is better)
Translates to: HSIRPSSACFHS*NWREASSWTLL
Trigger: GAGAAGGGTCCAGCTGCTGGCTTCCCTCCAATTGCAGGAATGGAAGCAGGCTGAAGAAGGCCTAATGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTTGCGCCACTTGAGTTTCTGCAGAATGTTGCTTCCTaGTTGGGAGCGCTCATCAGCCACCCTGGGCCACTT +
Preference number: 6 (lower is better)
Translates to: FAPLEFLQNVAS*LGALISHPGPL
Trigger: AAGTGGCCCAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ACGTTCAGAAAGTACTGCTGGACAGTGACAGCCTGTTaGAGGCAGTGTGCACGTTCTTCACACGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TFRKYCWTVTAC*RQCARSSHACS
Trigger: GGAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GGCCCACATCCAGCAACTCCCTCCACTTCTGGGCTTTaGTCCAGACCTTCCACCAGCTGTCCATCATTTCTT +
Preference number: 6 (lower is better)
Translates to: GPHPATPSTSGL*SRPSTSCPSFL
Trigger: AAGAAATGATGGACAGCTGGTGGAAGGTCTGGAGCAAAGCCCAGAAGTGGAGGGAGTTGCTGGATGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCAGCCTGGAAATTCTGCTGCTTCTGCAACTGTGTTTaGATCGTGGCTGGGTCCTGCTGGCCCTCATCCAGA +
Preference number: 6 (lower is better)
Translates to: SAWKFCCFCNCV*IVAGSCWPSSR
Trigger: TCTGGATGAGGGCCAGCAGGACCCAGCCACGATGCAAACACAGTTGCAGAAGCAGCAGAATTTCCAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CCCTGTAGTCTGGCCATCTTCCTCTGGCAGTTGGTCTaGAGCTCATCCCAGAGGCCTCCTAATTCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: PCSLAIFLWQLV*SSSQRPPNSSS
Trigger: ACTGGAAGAATTAGGAGGCCTCTGGGATGAGCTGCAGACCAACTGCCAGAGGAAGATGGCCAGACTACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCACTGGCCCCAAACTCCTCCCTGTCCAAGGAGATGTaGGAAATCTGGAAACGCAGAATGATGACCCAGAGG +
Preference number: 6 (lower is better)
Translates to: ALAPNSSLSKEM*EIWKRRMMTQR
Trigger: CCTCTGGGTCATCATTCTGCGTTTCCAGATTTCCCACATCTCCTTGGACAGGGAGGAGTTTGGGGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCATACAGCTCAACTGAGGCCTGCAGTTGCTGGTGTTaGGTGGCTAGCTTGCTCTGCAGGGACTTGAACCTC +
Preference number: 6 (lower is better)
Translates to: SYSSTEACSCWC*VASLLCRDLNL
Trigger: GAGGTTCAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCTGTATGAGCTTGTGCCCTGTACCTGTCACCACCTaGCTCAGAGCCTTGTGGCTATGGATCTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: ACMSLCPVPVTT*LRALWLWISFS
Trigger: GGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCCCTCAGGGTCTGCATCTTGGCCTGGCCCAGGCTCTaGACTTCTCTGTTGAAAGCACCAAACATGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SLRVCILAWPRL*TSLLKAPNMSS
Trigger: GGAAGACATGTTTGGTGCTTTCAACAGAGAAGTCCAGAGCCTGGGCCAGGCCAAGATGCAGACCCTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GGATCTGGCTGTGTCAGGGGCTCTCTGACACTGAAGTaGCGTCCTCTCTGCATGAGATCTACACACACTGCC +
Preference number: 6 (lower is better)
Translates to: GSGCVRGSLTLK*RPLCMRSTHTA
Trigger: GGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAACTTCAGTGTCAGAGAGCCCCTGACACAGCCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGTCCTGGACATCTCTGCTTCAGTTGTTCAGCAGTGTaGATGGCCTCTGCCCAGTGGCCTTTTCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: CPGHLCFSCSAV*MASAQWPFPVA
Trigger: GGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CACGTTCAGAAAGTACTGCTGGACAGTGACAGCCTGTaGCAGGCAGTGTGCACGTTCTTCACACGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: HVQKVLLDSDSL*QAVCTFFTRLL
Trigger: GAGCAGGCGTGTGAAGAACGTGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGGCCCACATCCAGCAACTCCCTCCACTTCTGGGCTTaGCTCCAGACCTTCCACCAGCTGTCCATCATTTCT +
Preference number: 6 (lower is better)
Translates to: WPTSSNSLHFWA*LQTFHQLSIIS
Trigger: AGAAATGATGGACAGCTGGTGGAAGGTCTGGAGCAAAGCCCAGAAGTGGAGGGAGTTGCTGGATGTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTGCATCTTCTTCTCCTCAATCCAGCAGAGCAGGTCAGCCACCAGTaGCTTGTATTGTGCCTGCAATACCTCCGTCTCCTGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LHLLLLNPAEQVSHQ*LVLCLQYLRLLQLQ
Trigger: CTGCAGCTGCAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACTGGTGGCTGACCTGCTCTGCTGGATTGAGGAGAAGAAGATGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp TCACGTCAGCCTGAGCCTGGAGTATGGTGCTGGAGTTaGAGTGAACGTCATTCTCAGCCTGCAGAACTGTCC +
Preference number: 6 (lower is better)
Translates to: SRQPEPGVWCWS*SERHSQPAELS
Trigger: GGACAGTTCTGCAGGCTGAGAATGACGTTCACTTCAACTCCAGCACCATACTCCAGGCTCAGGCTGACGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp AATACCAGGACCTTCTGCTGGGTCTGCTGTAGGGTATaGTGGCTGTCCCCAGAGCTTCTTGTTCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: NTRTFCWVCCRV*WLSPELLVPRV
Trigger: GACTCTGGGAACAAGAAGCTCTGGGGACAGCCATCATACCCTACAGCAGACCCAGCAGAAGGTCCTGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GGGCAACTGTTTGCTGTAACTGCTCAATGCGACTGCTaGACCCTTCCAAGTCTCTTGTGGTGGCCTCTAGGC +
Preference number: 6 (lower is better)
Translates to: GQLFAVTAQCDC*TLPSLLWWPLG
Trigger: GCCTAGAGGCCACCACAAGAGACTTGGAAGGGTTCAGCAGTCGCATTGAGCAGTTACAGCAAACAGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGTTGCTTGTATTGTGCCTGCAATACCTCCGTCTCCTaGAGCTGCAGCAGGATCTTAGCCAGTCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SCLYCACNTSVS*SCSRILASLLW
Trigger: CCAGAGGAGACTGGCTAAGATCCTGCTGCAGCTGCAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTCTCCTCAATCCAGCAGAGCAGGTCAGCCACCAGTTaGTTGTATTGTGCCTGCAATACCTCCGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: FSSIQQSRSATS*LYCACNTSVSC
Trigger: GCAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACTGGTGGCTGACCTGCTCTGCTGGATTGAGGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GGGTCGGTGAGGGAGGCTCTGGCCTGGTCTAACATCTaGTCTACGTCATTTAAAAAGCTTTCCCGGTGGGAT +
Preference number: 6 (lower is better)
Translates to: GSVREALAWSNI*STSFKKLSRWD
Trigger: ATCCCACCGGGAAAGCTTTTTAAATGACGTAGAGCAGATGTTAGACCAGGCCAGAGCCTCCCTCACCGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCTCTGCTTCAGTTGTTCAGCAGTGTTGATGGCCTCTaGCCAGTGGCCTTTTCCAGTGGCCAAGGTCATGAG +
Preference number: 6 (lower is better)
Translates to: SLLQLFSSVDGL*PVAFSSGQGHE
Trigger: CTCATGACCTTGGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTCTCCTCCATCCACAGCATTAGGCCTTCTTCAGCCTaGTTCCATTCCTGCAATTGGAGGGAAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FSSIHSIRPSSA*FHSCNWREASS
Trigger: GCTGCTGGCTTCCCTCCAATTGCAGGAATGGAAGCAGGCTGAAGAAGGCCTAATGCTGTGGATGGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ACCCAGGTCTCCATCTCTGACACGTTCAGAAAGTACTaGTGGACAGTGACAGCCTGTTGCAGGCAGTGTGCA +
Preference number: 6 (lower is better)
Translates to: TQVSISDTFRKY*WTVTACCRQCA
Trigger: TGCACACTGCCTGCAACAGGCTGTCACTGTCCAGCAGTACTTTCTGAACGTGTCAGAGATGGAGACCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGCACTTTCTGGAAGATCACGTGCTTTCGGATCAACTaGTCCACTTCTTCCACTGAGCTCCCCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: STFWKITCFRIN*STSSTELPRPL
Trigger: CAGTGGCCTGGGGAGCTCAGTGGAAGAAGTGGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TCCTGCTGCAGCACTTTCTGTCTCCATGATAGCCTCTaGACATTCTCCAAATCTTCAGTGCCCTCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SCCSTFCLHDSL*TFSKSSVPSGA
Trigger: GGCCCCAGAGGGCACTGAAGATTTGGAGAATGTGCAGAGGCTATCATGGAGACAGAAAGTGCTGCAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTGCTCCAGACCTTCCACCAGCTGTCCATCATTTCTTaGTGCTTATGTCTGAGGCTGTGGGCAACCTCGGGA +
Preference number: 6 (lower is better)
Translates to: LLQTFHQLSIIS*CLCLRLWATSG
Trigger: TCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGAAATGATGGACAGCTGGTGGAAGGTCTGGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTCATCCAGAGCCGCCAGGCTCTTCTCCCTCAGCCATaGAGTTACCTCATTGGAATCCTGCAAAAATGTCCG +
Preference number: 6 (lower is better)
Translates to: LIQSRQALLPQP*SYLIGILQKCP
Trigger: CGGACATTTTTGCAGGATTCCAATGAGGTAACTGCATGGCTGAGGGAGAAGAGCCTGGCGGCTCTGGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp AGAATGATGACCCAGAGGAGTCCCAGGATGAGTGACTaGTCCCCATCCACAATGTTCTCTGGCCCGATGAAG +
Preference number: 6 (lower is better)
Translates to: RMMTQRSPRMSD*SPSTMFSGPMK
Trigger: CTTCATCGGGCCAGAGAACATTGTGGATGGGGACCAGTCACTCATCCTGGGACTCCTCTGGGTCATCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCTGCTCTCTGGGGAGCCTGACTCCATCACCTCTATaGTTGCTCTTTGGAGGTAGGAGATCTTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: ACSLGSLTPSPL*LLFGGRRSSSP
Trigger: TGGAGAAGAAGATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCCTCCCCAAGGTTGTCCAGCTGCAGTAAGGCCTCATaGCTGGCACAGGTGGCCATGAAATCATCTACTTCT +
Preference number: 6 (lower is better)
Translates to: SSPRLSSCSKAS*LAQVAMKSSTS
Trigger: AGAAGTAGATGATTTCATGGCCACCTGTGCCAGCCATGAGGCCTTACTGCAGCTGGACAACCTTGGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CTTCTCCTCAATCCAGCAGAGCAGGTCAGCCACCAGTaGCTTGTATTGTGCCTGCAATACCTCCGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LLLNPAEQVSHQ*LVLCLQYLRLL
Trigger: CAGGAGACGGAGGTATTGCAGGCACAATACAAGCAACTGGTGGCTGACCTGCTCTGCTGGATTGAGGAGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TTCGAGATGTGTCCTGGACATCTCTGCTTCAGTTGTTCAGCAGTGTaGATGGCCTCTGCCCAGTGGCCTTTTCCAGTGGCCAAGGTCATG +
Preference number: 6 (lower is better)
Translates to: FEMCPGHLCFSCSAV*MASAQWPFPVAKVM
Trigger: CATGACCTTGGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGACACATCTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CAGGGCTTCCAGCTGCTGCCACCACCTTTGCTTCAGGTCCTCCTGTaGTTGTTGGATTTTCGAGATGTGTCCTGGACATCTCTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: QGFQLLPPPLLQVLL*LLDFRDVSWTSLLQ
Trigger: CTGAAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAGCTGGAAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TCTGCTGGGTCTGCTGTAGGGTATGATGGCTGTCCCCAGAGCTTCTaGTTCCCAGAGTCTCCAGCCTGCTTATCACATTTAGCAGTTGGG +
Preference number: 6 (lower is better)
Translates to: SAGSAVGYDGCPQSF*FPESPACLSHLAVG
Trigger: CCCAACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACAGCCATCATACCCTACAGCAGACCCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CTTCTGGGCTTTGCTCCAGACCTTCCACCAGCTGTCCATCATTTCTaGCTGCTTATGTCTGAGGCTGTGGGCAACCTCGGGACTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LLGFAPDLPPAVHHF*LLMSEAVGNLGTFL
Trigger: AAGGAAAGTCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGAAATGATGGACAGCTGGTGGAAGGTCTGGAGCAAAGCCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GGGAGAAGTAGTGGTAGTACTGAGACAGGTAGGTCATaGTGGAGCACTCATCTGGATGCAGGGCTGCCACAT +
Preference number: 6 (lower is better)
Translates to: GRSSGSTETGRS*WSTHLDAGLPH
Trigger: ATGTGGCAGCCCTGCATCCAGATGAGTGCTCCATCATGACCTACCTGTCTCAGTACTACCACTACTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp TCCACCAGCTGTCCATCATTTCTTGCTGCTTATGTCTaGGGCTGTGGGCAACCTCGGGACTTTCCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: STSCPSFLAAYV*GCGQPRDFPCR
Trigger: TCTGCAAGGAAAGTCCCGAGGTTGCCCACAGCCTCAGACATAAGCAGCAAGAAATGATGGACAGCTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CACCCTTTGCCTCCTCTGTCATCGTCTGAAGCTGAATaGATGTCTCCTCGTGGGCCACCAGCAGCTTTTCTA +
Preference number: 6 (lower is better)
Translates to: HPLPPLSSSEAE*MSPRGPPAAFL
Trigger: TAGAAAAGCTGCTGGTGGCCCACGAGGAGACATTCATTCAGCTTCAGACGATGACAGAGGAGGCAAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GAAGTTGCGTCCTCTCTGCATGAGATCTACACACACTaGCTGGTGGCGATGGAGTTCTGTTTCCAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: EVASSLHEIYTH*LVAMEFCFQSL
Trigger: AAGGCTCTGGAAACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTTCTGGCTCTCCTCCAGGATGGTCCAGGAAGTGAATaGATTGTGGGTCTGAGAGATGAGGGCATCCATCTT +
Preference number: 6 (lower is better)
Translates to: LLALLQDGPGSE*IVGLRDEGIHL
Trigger: AAGATGGATGCCCTCATCTCTCAGACCCACAATGCATTCACTTCCTGGACCATCCTGGAGGAGAGCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTCTCCCTCAGCCATGCAGTTACCTCATTGGAATCCTaGAAAAATGTCCGAAGCTTCCGCAGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FSLSHAVTSLES*KNVRSFRSSSS
Trigger: GCTGGAGGAGCTGCGGAAGCTTCGGACATTTTTGCAGGATTCCAATGAGGTAACTGCATGGCTGAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CGTCCTCTCTGCATGAGATCTACACACACTGCCTGGTaGCGATGGAGTTCTGTTTCCAGAGCCTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: RPLCMRSTHTAW*RWSSVSRALCF
Trigger: GAAACACAAGGCTCTGGAAACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTGCGTCCTCTCTGCATGAGATCTACACACACTGCCTaGTGGCGATGGAGTTCTGTTTCCAGAGCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: LRPLCMRSTHTA*WRWSSVSRALC
Trigger: ACACAAGGCTCTGGAAACAGAACTCCATCGCCACCAGGCAGTGTGTGTAGATCTCATGCAGAGAGGACGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCGACTCCTTCTTGTCCTGGAGAGCTAGCACTTTCTaGAAGATCACGTGCTTTCGGATCAACTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: ADSFLSWRASTF*KITCFRINCST
Trigger: AGTGGAGCAGTTGATCCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCAGGCTCTTCTCCCTCAGCCATGCAGTTACCTCATTaGAATCCTGCAAAAATGTCCGAAGCTTCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PGSSPSAMQLPH*NPAKMSEASAA
Trigger: AGCTGCGGAAGCTTCGGACATTTTTGCAGGATTCCAATGAGGTAACTGCATGGCTGAGGGAGAAGAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GATTTTCGAGATGTGTCCTGGACATCTCTGCTTCAGTaGTTCAGCAGTGTTGATGGCCTCTGCCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: DFRDVSWTSLLQ*FSSVDGLCPVA
Trigger: GGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGACACATCTCGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GGCTTCCAGCTGCTGCCACCACCTTTGCTTCAGGTCCTCCTGTTGTaGTTGGATTTTCGAGATGTGTCCTGGACATCTCTGCTTCAGTTG +
Preference number: 6 (lower is better)
Translates to: GFQLLPPPLLQVLLL*LDFRDVSWTSLLQL
Trigger: CAACTGAAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAGCTGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp AAAGCAGCCTGCTCTCTGGGGAGCCTGACTCCATCACCTCTATGGTaGCTCTTTGGAGGTAGGAGATCTTCTTCTCCAATACCAGGACCT +
Preference number: 6 (lower is better)
Translates to: KAACSLGSLTPSPLW*LFGGRRSSSPIPGP
Trigger: AGGTCCTGGTATTGGAGAAGAAGATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCAGGCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp AGAGCGGCATTGGGCATGTGCTCAGCTGCCCATGTGAGCTCCAGGTaGCTAAGGAGATTAAATTCATACAGCTCAACTGAGGCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: RAALGMCSAAHVSSR*LRRLNSYSSTEACS
Trigger: ACTGCAGGCCTCAGTTGAGCTGTATGAATTTAATCTCCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAATGCCGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TTTTGCCGCTGGCAGATGGTCTCGGATTCCTCAGGGCCCTGGTTCTaGAGCTGCAGTGACAAGTTTTTGATTCCCTTGATGTGGGCATCA +
Preference number: 6 (lower is better)
Translates to: FCRWQMVSDSSGPWF*SCSDKFLIPLMWAS
Trigger: TGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAGACCATCTGCCAGCGGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp GGGCTTGAAATCGTCTTTAGCTGCTCATTCAGAGCCGACTCCTTCTaGTCCTGGAGAGCTAGCACTTTCTGGAAGATCACGTGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: GLEIVFSCSFRADSF*SWRASTFWKITCFR
Trigger: CCGAAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGCTCTGAATGAGCAGCTAAAGACGATTTCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TCAGGGCCCTGGTTCTTGAGCTGCAGTGACAAGTTTTTGATTCCCTaGATGTGGGCATCATCCACTGTGACCTGTAACCTGCGGACTTGT +
Preference number: 6 (lower is better)
Translates to: SGPWFLSCSDKFLIP*MWASSTVTCNLRTC
Trigger: ACAAGTCCGCAGGTTACAGGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TCGGATTCCTCAGGGCCCTGGTTCTTGAGCTGCAGTGACAAGTTTTaGATTCCCTTGATGTGGGCATCATCCACTGTGACCTGTAACCTG +
Preference number: 6 (lower is better)
Translates to: SDSSGPWFLSCSDKF*IPLMWASSTVTCNL
Trigger: CAGGTTACAGGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp TGTATGAGCTTGTGCCCTGTACCTGTCACCACCTGGCTCAGAGCCTaGTGGCTATGGATCTCATTCTCCAAATTCTGGTGTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CMSLCPVPVTTWLRA*WLWISFSKFWCFSC
Trigger: GCAGGAGAAACACCAGAATTTGGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTACAGGGCACAAGCTCATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp CTCGGATTCCTCAGGGCCCTGGTTCTTGAGCTGCAGTaGCAAGTTTTTGATTCCCTTGATGTGGGCATCATC +
Preference number: 6 (lower is better)
Translates to: LGFLRALVLELQ*QVFDSLDVGII
Trigger: GATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGATTAAATTCATACAGCTCAACTGAGGCCTGCAGTTaGTGGTGTTGGGTGGCTAGCTTGCTCTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: RLNSYSSTEACS*WCWVASLLCRD
Trigger: GTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAATTTAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGGTTCTGCCCCTTAGGGCTTGAAATCGTCTTTAGCTaGTCATTCAGAGCCGACTCCTTCTTGTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RFCPLGLEIVFS*SFRADSFLSWR
Trigger: TCTCCAGGACAAGAAGGAGTCGGCTCTGAATGAGCAGCTAAAGACGATTTCAAGCCCTAAGGGGCAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TTCTCCTGGATCCAGGTCTCTGCTAGGTCCACTCTCTaGAGGAACTCCTGGAAGTTGTATCTGTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: FSWIQVSARSTL*RNSWKLYLFSR
Trigger: CCTAGAGAACAGATACAACTTCCAGGAGTTCCTGCAGAGAGTGGACCTAGCAGAGACCTGGATCCAGGAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp ATGGTCTCGGATTCCTCAGGGCCCTGGTTCTTGAGCTaGAGTGACAAGTTTTTGATTCCCTTGATGTGGGCA +
Preference number: 6 (lower is better)
Translates to: MVSDSSGPWFLS*SDKFLIPLMWA
Trigger: TGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAGACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTGTTCCACAGATGCCTCCGTGACATGACCACCCTTTaGCTCCTCTGTCATCGTCTGAAGCTGAATGAATGT +
Preference number: 6 (lower is better)
Translates to: LFHRCLRDMTTL*LLCHRLKLNEC
Trigger: ACATTCATTCAGCTTCAGACGATGACAGAGGAGGCAAAGGGTGGTCATGTCACGGAGGCATCTGTGGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTCAGTTGTTCAGCAGTGTTGATGGCCTCTGCCCAGTaGCCTTTTCCAGTGGCCAAGGTCATGAGAACATTC +
Preference number: 6 (lower is better)
Translates to: FSCSAVLMASAQ*PFPVAKVMRTF
Trigger: GAATGTTCTCATGACCTTGGCCACTGGAAAAGGCCACTGGGCAGAGGCCATCAACACTGCTGAACAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTAAATTCATACAGCTCAACTGAGGCCTGCAGTTGCTaGTGTTGGGTGGCTAGCTTGCTCTGCAGGGACTTG +
Preference number: 6 (lower is better)
Translates to: LNSYSSTEACSC*CWVASLLCRDL
Trigger: CAAGTCCCTGCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAATTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GTACCTGTCACCACCTGGCTCAGAGCCTTGTGGCTATaGATCTCATTCTCCAAATTCTGGTGTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VPVTTWLRALWL*ISFSKFWCFSC
Trigger: GCAGGAGAAACACCAGAATTTGGAGAATGAGATCCATAGCCACAAGGCTCTGAGCCAGGTGGTGACAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CTGCTGCCACCACCTTTGCTTCAGGTCCTCCTGTTGTaGTTGGATTTTCGAGATGTGTCCTGGACATCTCTG +
Preference number: 6 (lower is better)
Translates to: LLPPPLLQVLLL*LDFRDVSWTSL
Trigger: CAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CAGCTGCTGCCACCACCTTTGCTTCAGGTCCTCCTGTaGTTGTTGGATTTTCGAGATGTGTCCTGGACATCT +
Preference number: 6 (lower is better)
Translates to: QLLPPPLLQVLL*LLDFRDVSWTS
Trigger: AGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TCAGGGCCCTGGTTCTTGAGCTGCAGTGACAAGTTTTaGATTCCCTTGATGTGGGCATCATCCACTGTGACC +
Preference number: 6 (lower is better)
Translates to: SGPWFLSCSDKF*IPLMWASSTVT
Trigger: GGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGGCAGATGGTCTCGGATTCCTCAGGGCCCTGGTTCTaGAGCTGCAGTGACAAGTTTTTGATTCCCTTGATG +
Preference number: 6 (lower is better)
Translates to: WQMVSDSSGPWF*SCSDKFLIPLM
Trigger: CATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCAGGGCCCTGAGGAATCCGAGACCATCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS TCA 72 bp GTTTCCACTCGCTGGGCACCAGTTTCAACCTGGTACTaGAACTTTGTAAACTCAGTGCAGAGTTGCAGCACG +
Preference number: 6 (lower is better)
Translates to: VSTRWAPVSTWY*NFVNSVQSCST
Trigger: CGTGCTGCAACTCTGCACTGAGTTTACAAAGTTTCAGTACCAGGTTGAAACTGGTGCCCAGCGAGTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGTCCCCAGAGCTTCTTGTTCCCAGAGTCTCCAGCCTaGTTATCACATTTAGCAGTTGGGCTTGTATGGGTT +
Preference number: 6 (lower is better)
Translates to: CPQSFLFPESPA*LSHLAVGLVWV
Trigger: AACCCATACAAGCCCAACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp GCATATGGGTTGCTATGCAACAGTTCTTTCCCAGCCTaGTGTAGCTCTTCCATGTACCTCCGAGAGGCTAAT +
Preference number: 6 (lower is better)
Translates to: AYGLLCNSSFPA*CSSSMYLREAN
Trigger: ATTAGCCTCTCGGAGGTACATGGAAGAGCTACAGCAGGCTGGGAAAGAACTGTTGCATAGCAACCCATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp CTAAGGAGATTAAATTCATACAGCTCAACTGAGGCCTaGAGTTGCTGGTGTTGGGTGGCTAGCTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LRRLNSYSSTEA*SCWCWVASLLC
Trigger: GCAGAGCAAGCTAGCCACCCAACACCAGCAACTGCAGGCCTCAGTTGAGCTGTATGAATTTAATCTCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGTCCACTCTCCAGAAGGGCAACTGTTTGCTGTAACTaGTCAATGCGACTGCTGAACCCTTCCAAGTCTCTT +
Preference number: 6 (lower is better)
Translates to: CPLSRRATVCCN*SMRLLNPSKSL
Trigger: AAGAGACTTGGAAGGGTTCAGCAGTCGCATTGAGCAGTTACAGCAAACAGTTGCCCTTCTGGAGAGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TGCCACCACCTTTGCTTCAGGTCCTCCTGTTGTTGTTaGATTTTCGAGATGTGTCCTGGACATCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CHHLCFRSSCCC*IFEMCPGHLCF
Trigger: GAAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp CTGCCACCACCTTTGCTTCAGGTCCTCCTGTTGTTGTaGGATTTTCGAGATGTGTCCTGGACATCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LPPPLLQVLLLL*DFRDVSWTSLL
Trigger: AAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACAACAGGAGGACCTGAAGCAAAGGTGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TCTGCTGTAGGGTATGATGGCTGTCCCCAGAGCTTCTaGTTCCCAGAGTCTCCAGCCTGCTTATCACATTTA +
Preference number: 6 (lower is better)
Translates to: SAVGYDGCPQSF*FPESPACLSHL
Trigger: TAAATGTGATAAGCAGGCTGGAGACTCTGGGAACAAGAAGCTCTGGGGACAGCCATCATACCCTACAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGCTCTCTGGGGAGCCTGACTCCATCACCTCTATGGTaGCTCTTTGGAGGTAGGAGATCTTCTTCTCCAATA +
Preference number: 6 (lower is better)
Translates to: CSLGSLTPSPLW*LFGGRRSSSPI
Trigger: TATTGGAGAAGAAGATCTCCTACCTCCAAAGAGCAACCATAGAGGTGATGGAGTCAGGCTCCCCAGAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TTAGTTATTTTGCGCCACTTGAGTTTCTGCAGAATGTaGCTTCCTGCTTGGGAGCGCTCATCAGCCACCCTG +
Preference number: 6 (lower is better)
Translates to: LVILRHLSFCRM*LPAWERSSATL
Trigger: CAGGGTGGCTGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAAATAACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp TGTTGTTGGATTTTCGAGATGTGTCCTGGACATCTCTaGTTCAGTTGTTCAGCAGTGTTGATGGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: CCWIFEMCPGHL*FSCSAVLMASA
Trigger: GGCAGAGGCCATCAACACTGCTGAACAACTGAAGCAGAGATGTCCAGGACACATCTCGAAAATCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp GCCAAGCCTTTTCCAGTCTTCTGGAGGTTCCTCATTTaGTGTAGGAGAGACAAGTCTGGATCCTTTCCATGT +
Preference number: 6 (lower is better)
Translates to: AKPFPVFWRFLI*CRRDKSGSFPC
Trigger: ACATGGAAAGGATCCAGACTTGTCTCTCCTACACCAAATGAGGAACCTCCAGAAGACTGGAAAAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCAGCCTGCTTATCACATTTAGCAGTTGGGCTTGTATaGGTTCAGACTCCTGTAAAAGACTGCACACCTCCA +
Preference number: 6 (lower is better)
Translates to: PACLSHLAVGLV*VQTPVKDCTPP
Trigger: TGGAGGTGTGCAGTCTTTTACAGGAGTCTGAACCCATACAAGCCCAACTGCTAAATGTGATAAGCAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp CCCAGAGTCTCCAGCCTGCTTATCACATTTAGCAGTTaGGCTTGTATGGGTTCAGACTCCTGTAAAAGACTG +
Preference number: 6 (lower is better)
Translates to: PRVSSLLITFSS*ACMGSDSCKRL
Trigger: CAGTCTTTTACAGGAGTCTGAACCCATACAAGCCCAACTGCTAAATGTGATAAGCAGGCTGGAGACTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTTAGCTGCTCATTCAGAGCCGACTCCTTCTTGTCCTaGAGAGCTAGCACTTTCTGGAAGATCACGTGCTTT +
Preference number: 6 (lower is better)
Translates to: FSCSFRADSFLS*RASTFWKITCF
Trigger: AAAGCACGTGATCTTCCAGAAAGTGCTAGCTCTCCAGGACAAGAAGGAGTCGGCTCTGAATGAGCAGCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TTGAGCTGCAGTGACAAGTTTTTGATTCCCTTGATGTaGGCATCATCCACTGTGACCTGTAACCTGCGGACT +
Preference number: 6 (lower is better)
Translates to: LSCSDKFLIPLM*ASSTVTCNLRT
Trigger: AGTCCGCAGGTTACAGGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TCTGACTGTCTCCCAACTCTTCAAGCTTCCAGGTATTaGGAGCCTCTTCTCTGGAGAAGAAGGCTATCTGCT +
Preference number: 6 (lower is better)
Translates to: SDCLPTLQASRY*EPLLWRRRLSA
Trigger: AGCAGATAGCCTTCTTCTCCAGAGAAGAGGCTCCAAATACCTGGAAGCTTGAAGAGTTGGGAGACAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TTGGGCATGTGCTCAGCTGCCCATGTGAGCTCCAGGTaGCTAAGGAGATTAAATTCATACAGCTCAACTGAG +
Preference number: 6 (lower is better)
Translates to: LGMCSAAHVSSR*LRRLNSYSSTE
Trigger: CTCAGTTGAGCTGTATGAATTTAATCTCCTTAGCAACCTGGAGCTCACATGGGCAGCTGAGCACATGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp CAGTGGCCTTTTCCAGTGGCCAAGGTCATGAGAACATTCTCATATTaGAGTTGTATGACCTCTAAGTTGTGTCCCTGGGGCTGCAATGTT +
Preference number: 6 (lower is better)
Translates to: QWPFPVAKVMRTFSY*SCMTSKLCPWGCNV
Trigger: AACATTGCAGCCCCAGGGACACAACTTAGAGGTCATACAACTCAAATATGAGAATGTTCTCATGACCTTGGCCACTGGAAAAGGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS GCA 72 bp AGCTCACTCTTAGTTATTTTGCGCCACTTGAGTTTCTaGAGAATGTTGCTTCCTGCTTGGGAGCGCTCATCA +
Preference number: 6 (lower is better)
Translates to: SSLLVILRHLSF*RMLLPAWERSS
Trigger: TGATGAGCGCTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAAATAACTAAGAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp TCATATTTGAGTTGTATGACCTCTAAGTTGTGTCCCTaGGGCTGCAATGTTTGGAACAGTGCGGTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SYLSCMTSKLCP*GCNVWNSAVCF
Trigger: GAAGCAGACCGCACTGTTCCAAACATTGCAGCCCCAGGGACACAACTTAGAGGTCATACAACTCAAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TGGTTCTTGAGCTGCAGTGACAAGTTTTTGATTCCCTaGATGTGGGCATCATCCACTGTGACCTGTAACCTG +
Preference number: 6 (lower is better)
Translates to: WFLSCSDKFLIP*MWASSTVTCNL
Trigger: CAGGTTACAGGTCACAGTGGATGATGCCCACATCAAGGGAATCAAAAACTTGTCACTGCAGCTCAAGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CCA 72 bp ACTCTTCAAGCTTCCAGGTATTTGGAGCCTCTTCTCTaGAGAAGAAGGCTATCTGCTGATGTGAATAATGGC +
Preference number: 6 (lower is better)
Translates to: TLQASRYLEPLL*RRRLSADVNNG
Trigger: GCCATTATTCACATCAGCAGATAGCCTTCTTCTCCAGAGAAGAGGCTCCAAATACCTGGAAGCTTGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp TTTCCAGTGGCCAAGGTCATGAGAACATTCTCATATTaGAGTTGTATGACCTCTAAGTTGTGTCCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: FPVAKVMRTFSY*SCMTSKLCPWG
Trigger: GCCCCAGGGACACAACTTAGAGGTCATACAACTCAAATATGAGAATGTTCTCATGACCTTGGCCACTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp GAGGCTAATAGCTCACTCTTAGTTATTTTGCGCCACTaGAGTTTCTGCAGAATGTTGCTTCCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: EANSSLLVILRH*SFCRMLLPAWE
Trigger: CTCCCAAGCAGGAAGCAACATTCTGCAGAAACTCAAGTGGCGCAAAATAACTAAGAGTGAGCTATTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 72 bp AGAACATTCTCATATTTGAGTTGTATGACCTCTAAGTaGTGTCCCTGGGGCTGCAATGTTTGGAACAGTGCG +
Preference number: 6 (lower is better)
Translates to: RTFSYLSCMTSK*CPWGCNVWNSA
Trigger: CGCACTGTTCCAAACATTGCAGCCCCAGGGACACAACTTAGAGGTCATACAACTCAAATATGAGAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4
CDS CAA 90 bp ATCTTCCATCTTGTGGTTCAACTCTTCCCATTTGTGATTAAGGCTTaGAAGTCTGTCCTGTATGTCCTCCTGTGCATATGGGTTGCTATG +
Preference number: 6 (lower is better)
Translates to: IFHLVVQLFPFVIKA*KSVLYVLLCIWVAM
Trigger: CATAGCAACCCATATGCACAGGAGGACATACAGGACAGACTTCAAAGCCTTAATCACAAATGGGAAGAGTTGAACCACAAGATGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156159.4