RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTBN4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000011751

Ensembl transcript IDs: ENSMUST00000011895.14, ENSMUST00000108362.8, ENSMUST00000108363.8, ENSMUST00000108364.8, ENSMUST00000152572.2, ENSMUST00000172269.2

Found 1048 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCTCCTAGATCCCTCGCCACTCCAGCTTCTTGGGGCAGGATCTaGCGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGC +
Preference number: 1 (lower is better)
Translates to: PPPRSLATPASWGRI*RLGRELGSTGSLPG
Trigger: GCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCCTGCCCCAAGAAGCTGGAGTGGCGAGGGATCTAGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR CCA 90 bp CACTCCAGCTTCTTGGGGCAGGATCTGACGATTGGGCAGGGAGCTTaGCTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTG +
Preference number: 1 (lower is better)
Translates to: HSSFLGQDLTIGQGA*LNWLPARPHQAQLL
Trigger: CAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCCTGCCCCAAGAAGCTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR GCA 90 bp GTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTaGAGAGAGGAGGGGCAAGGAGACTTGTCAGACTCCAAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: VIPALADEKLSLCPQ*REEGQGDLSDSKVG
Trigger: CCCCACCTTGGAGTCTGACAAGTCTCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR GCA 90 bp GATATGGCTATAGGGACAGCAATCCCCTACCACCACCTCTTGGAGTaGAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAG +
Preference number: 1 (lower is better)
Translates to: DMAIGTAIPYHHLLE*RSPFYFRPTVAHPQ
Trigger: CTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAAGAGGTGGTGGTAGGGGATTGCTGTCCCTATAGCCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGGAGCTTGGCTCAACTaGCTCCCTGCCCGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGGAWLN*LPARPH
Trigger: GTGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCTCAACTGGCTCCCTaGCCGGCCCCACCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAQLAP*PAPPSS
Trigger: TGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCCCAGCACCTGGGGTaGGGTTGGCGAGCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPQHLG*GWRAGR
Trigger: CCTTCCCGCTCGCCAACCCCACCCCAGGTGCTGGGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGGAGCTTGGCTCAACTaGCTCCCTGCCCGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPGAWLN*LPARPH
Trigger: GTGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCCGGCCCTTGCGGATaGGAAGTTGTCTTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSGPCG*EVVFVS
Trigger: GGACACAAAGACAACTTCTCATCCGCAAGGGCCGGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCTTTGTGTCCACAGTaGAGAGAGGAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSLCPQ*REEGQG
Trigger: TCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCGCATGGCTCTGAGATaGCGGAGTACAGGGGCTAAG +
Preference number: 2 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGRMALR*RSTGAK
Trigger: CTTAGCCCCTGTACTCCGCCATCTCAGAGCCATGCG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCCGGCCCTTGCGGATaGGAAGTTGTCTTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSGPCG*EVVFVS
Trigger: GGACACAAAGACAACTTCTCATCCGCAAGGGCCGGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTCCGTCCCAGGGAGGTaGTCCAGCCAGAAGCATGCA +
Preference number: 2 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSVPGR*SSQKHA
Trigger: TGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCTACCACCACCTCTTaGAGTGCAGAAGTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPTTTS*SAEVPS
Trigger: AGAAGGGACTTCTGCACTCCAAGAGGTGGTGGTAGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCTTTGTGTCCACAGTaGAGAGAGGAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSLCPQ*REEGQG
Trigger: TCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCGGCCCTTGCGGATaGGAAGTTGTCTTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSGPCG*EVVFVS
Trigger: GGACACAAAGACAACTTCTCATCCGCAAGGGCCGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTCTTTGTGTCCACAGTaGAGAGAGGAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSLCPQ*REEGQG
Trigger: TCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR CAA 90 bp GGCACATCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTaGTGTCCACAGTGCAGAGAGGAGGGGCAAGGAGACTTGTCAGAC +
Preference number: 2 (lower is better)
Translates to: GTSAVIPALADEKLS*CPQCREEGQGDLSD
Trigger: GTCTGACAAGTCTCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCTTTGTGTCCACAGTaGAGAGAGGAGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSLCPQ*REEGQG
Trigger: TCCTTGCCCCTCCTCTCTGCACTGTGGACACAAAGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGTCAGACTCCAAGGTaGGGGAAAGGGTACCTGGAA +
Preference number: 2 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCQTPR*GKGYLE
Trigger: TTCCAGGTACCCTTTCCCCCACCTTGGAGTCTGACA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGTCAGACTCCAAGGTaGGGGAAAGGGTACCTGGAA +
Preference number: 2 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCQTPR*GKGYLE
Trigger: TTCCAGGTACCCTTTCCCCCACCTTGGAGTCTGACA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGTCAGACTCCAAGGTaGGGGAAAGGGTACCTGGAA +
Preference number: 2 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALCQTPR*GKGYLE
Trigger: TTCCAGGTACCCTTTCCCCCACCTTGGAGTCTGACA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTGTCAGACTCCAAGGTaGGGGAAAGGGTACCTGGAA +
Preference number: 2 (lower is better)
Translates to: SAVIPALADEKLSLCPQCCQTPR*GKGYLE
Trigger: TTCCAGGTACCCTTTCCCCCACCTTGGAGTCTGACA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGAGGAAGACAGTTTTaGACTTTGACTCCCCTCCTA +
Preference number: 2 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRGRQF*TLTPLL
Trigger: TAGGAGGGGAGTCAAAGTTCAAAACTGTCTTCCTCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR GCA 72 bp TTGCCTGTAACCCTGATTCCCTCCGTCCCAGGGAGGTaGTCCAGCCAGAAGCATGCAGGGGGAGGGCTTTCC +
Preference number: 3 (lower is better)
Translates to: LPVTLIPSVPGR*SSQKHAGGGLS
Trigger: GGAAAGCCCTCCCCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTACAGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR CCA 72 bp CAGGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTaGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTG +
Preference number: 3 (lower is better)
Translates to: QDLTIGQGAWLN*LPARPHQAQLL
Trigger: CAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR TCA 72 bp CAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGATaGGAAGTTGTCTTTGTGTCCACAGTGCAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: QWHIRSHSGPCG*EVVFVSTVQRG
Trigger: TCCTCTCTGCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGATGTGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR GCA 72 bp ATAGGGACAGCAATCCCCTACCACCACCTCTTGGAGTaGAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCA +
Preference number: 3 (lower is better)
Translates to: IGTAIPYHHLLE*RSPFYFRPTVA
Trigger: TGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAAGAGGTGGTGGTAGGGGATTGCTGTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCACCAAGCTCAGTTATaGCATAAAAAGAATGGAGCC +
Preference number: 3 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPHQAQL*HKKNGA
Trigger: GGCTCCATTCTTTTTATGCAATAACTGAGCTTGGTG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCGCCTCCTCCAGGCTaGGAGGCAGCGGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPPPPG*EAAAPR
Trigger: TCGAGGGGCCGCTGCCTCGCAGCCTGGAGGAGGCGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSKRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGGAAGCTCGCGAGGCTaGGGCAGCGACGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPGSSRG*GSDGPA
Trigger: TGCTGGGCCGTCGCTGCCTCAGCCTCGCGAGCTTCC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCGTCGTGTCCAACGCTaGGGCTGTCGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILRRVQR*GCRGRG
Trigger: CCCGCGGCCCCGACAGCCGCAGCGTTGGACACGACG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCATGCGGCCGCGAGTaGGCCTCGGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILACGRE*ASAAAP
Trigger: GGGAGCAGCTGCCGAGGCCCACTCGCGGCCGCATGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPRSANS*RSDRGR
Trigger: CCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGGTCCGCGGACTCCTaGCGCTCAGGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILWSADS*RSGRRL
Trigger: GAGGCGGCGGCCTGAGCGCCAGGAGTCCGCGGACCA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCCGCCGTCTGCGCCTaGAGCTCGCCCACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAAVCA*SSPTSR
Trigger: CCGAGAGGTGGGCGAGCTTCAGGCGCAGACGGCGGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSKRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGGGCGCGCTCTCCACTaGCCGTCGCTTCTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILGRALH*PSLLAH
Trigger: GTGCGCGAGAAGCGACGGGCAGTGGAGAGCGCGCCC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCGTGTCCGAGGCCCTaGGGGCCAAAGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILACPRP*GPKAPG
Trigger: GCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTGGCAGCCGGTCAATaGGCGGCTGGAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLAAGQ*AAGDAR
Trigger: CCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGTGAGAGCGCGGTGCTaGCGCGCCAGGCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGVRARC*RARRRL
Trigger: CAGCCGTCGCCTGGCGCGCCAGCACCGCGCTCTCAC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCACCGCTTCGGCCTCTaGGCTGCGCAGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILHRFGL*AAQRGQ
Trigger: CTGGCCTCGCTGCGCAGCCCAGAGGCCGAAGCGGTG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPPARG*RWPRRA
Trigger: AGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAALCE*AEVAAR
Trigger: CCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGACGCTGCAGGCGACCTaGCGCCGCAACCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRTLQAT*RRNRLA
Trigger: GGCGAGGCGGTTGCGGCGGCAGGTCGCCTGCAGCGT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAACTCCTTGCTCGCCTaGTCCAGCGGAAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPNSLLA*SSGSAA
Trigger: GGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSPTAL*RSPTNS
Trigger: GGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTTCGGCCTCTGGGCTaGGCAGCGAGGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLRPLG*AARPAR
Trigger: GCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCAGGCGCTCTGCAGCTaGTCTTGGCCACGGCGCACC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILQALCS*SWPRRT
Trigger: GGTGCGCCGTGGCCAAGAGCAGCTGCAGAGCGCCTG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPARRVR*MELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAMASA*SPAYTV
Trigger: GACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCGTCGTGTCCAACGCTaGGGCTGTCGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRRVQR*GCRGRG
Trigger: CCCGCGGCCCCGACAGCCGCAGCGTTGGACACGACG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCGCCAGGCGACGGCTaGACGCTTCGTCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPAPGDG*TLRRDQ
Trigger: TTGGTCACGACGAAGCGTCCAGCCGTCGCCTGGCGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLASKS*RALACV
Trigger: CACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCACCGCTTCGGCCTCTaGGCTGCGCAGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGHRFGL*AAQRGQ
Trigger: CTGGCCTCGCTGCGCAGCCCAGAGGCCGAAGCGGTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTCTGCAGCTGCTCTTaGCCACGGCGCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLCSCS*PRRTAS
Trigger: CGAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGTCCTGGCCCAGCTCTaGGGAGCCAGCTACCACCTC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPVLAQL*GASYHL
Trigger: GAGGTGGTAGCTGGCTCCCCAGAGCTGGGCCAGGAC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGAGGCAGCGAGCAGCTaGGCCCGAGTGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPEAASS*ARVPMS
Trigger: ACTCATGGGCACTCGGGCCCAGCTGCTCGCTGCCTC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPAGSAA*SWHWVW
Trigger: CCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGPPARG*RWPRRA
Trigger: AGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILDRPSS*QVASSG
Trigger: GCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCGGCTCAAGCCCGTTaGGCAGGCGACCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAAQAR*AGDQGE
Trigger: TTCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAALCE*AEVAAR
Trigger: CCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCCCGCCCTCACGCTTaGGGTTGCCCTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPRPHA*GCPHLW
Trigger: CCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCAGGGCTGCAGCATTaGGGGCCTCCACTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSGLQH*GPPLAH
Trigger: GTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCCGCCGTCTGCGCCTaGAGCTCGCCCACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLAAVCA*SSPTSR
Trigger: CCGAGAGGTGGGCGAGCTTCAGGCGCAGACGGCGGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSKRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCTCGCCCAGCTCCTTaGGCGCCACATAGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPRPAP*APHRGD
Trigger: ATCGCCTCTATGTGGCGCTCAAGGAGCTGGGCGAGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGCAGCCACTCCCAGTaGCGGTCCCACTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCSHSQ*RSHFSD
Trigger: GTCGGAGAAGTGGGACCGTCACTGGGAGTGGCTGCA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCCACCACGGCCTCCTaGGCAAACTGGTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPATTAS*ANWCTS
Trigger: GGAGGTACACCAGTTTGCTCAGGAGGCCGTGGTGGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCRSGS*AVSQAS
Trigger: TGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRGPHLR*QRVRGP
Trigger: AGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAACCATGCGTGCCCCCTaGTGCTGGGCCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPTMRAP*CWAFGV
Trigger: GACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCTAGCCCCAGGTGCTaGTCGGCTGTGCGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPASPRC*SAVRKA
Trigger: AGCTTTCCGCACAGCCGAGCAGCACCTGGGGCTAGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACGTGCTAGCCCCAGGTaGTGCTCGGCTGTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPRASPR*CSAVRK
Trigger: TTTCCGCACAGCCGAGCAGCACCTGGGGCTAGCACG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGCGCGCCGCCGTGCTaGCTGCTCCTGCAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRCAPPC*LLLQLR
Trigger: TCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCGCCTGCTGCCTCCTaGGCCCGCACCAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPAPAAS*ARTSQS
Trigger: GGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCGCCTGCTGCCTCCTaGGCCCGCACCAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLAPAAS*ARTSQS
Trigger: GGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCGCCTCCTCCAGGCTaGGAGGCAGCGGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPPPPG*EAAAPR
Trigger: TCGAGGGGCCGCTGCCTCGCAGCCTGGAGGAGGCGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCGCCACCTCCTGGTTaGGCAGCACCGCAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAPPPG*AAPQAP
Trigger: AGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILVPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTTCGGCCTCTGGGCTaGGCAGCGAGGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLRPLG*AARPAR
Trigger: GCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCAGGCGCTCTGCAGCTaGTCTTGGCCACGGCGCACC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGQALCS*SWPRRT
Trigger: GGTGCGCCGTGGCCAAGAGCAGCTGCAGAGCGCCTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCTGCTCGCCCAGCCATaGCTCCACCTCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLLAQP*LHLSHV
Trigger: GACGTGGCTGAGGTGGAGGCATGGCTGGGCGAGCAG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILARRVR*MELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTCCCAGGCCGCAGCTaGTTTTCGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLPGRS*FSEGLV
Trigger: CACGAGGCCTTCCGAAAAGCAGCTGCGGCCTGGGAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCGTGTCCGAGGCCCTaGGGGCCAAAGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRACPRP*GPKAPG
Trigger: GCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACGTCGTGTCCAACGCTaGGGCTGTCGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPRRVQR*GCRGRG
Trigger: CCCGCGGCCCCGACAGCCGCAGCGTTGGACACGACG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLASKS*RALACV
Trigger: CACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCTCTGCAGCTGCTCTTaGCCACGGCGCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLCSCS*PRRTAS
Trigger: CGAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAGTAGCGCCCGGCACTaGCGTGACAGCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSSARH*RDSWAM
Trigger: CATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGTCCTGGCCCAGCTCTaGGGAGCCAGCTACCACCTC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILVLAQL*GASYHL
Trigger: GAGGTGGTAGCTGGCTCCCCAGAGCTGGGCCAGGAC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGAGGCAGCGAGCAGCTaGGCCCGAGTGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILEAASS*ARVPMS
Trigger: ACTCATGGGCACTCGGGCCCAGCTGCTCGCTGCCTC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPPARG*RWPRRA
Trigger: AGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGCAGGTCGCGGGCCTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSRSRA*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAGGCCCGCGACCTGCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCTGTCATAGCCCCCTaGACGCAGCAAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPVIAP*TQQRRC
Trigger: GCAGCGCCTTTGCTGCGTCCAGGGGGCTATGACAGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCGGGCTTGAGCTCCTaGCGCACATACCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSGLSS*RTYPTR
Trigger: CCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGGTCCGCGGACTCCTaGCGCTCAGGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPWSADS*RSGRRL
Trigger: GAGGCGGCGGCCTGAGCGCCAGGAGTCCGCGGACCA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGGTCCGCGGACTCCTaGCGCTCAGGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPWSADS*RSGRRL
Trigger: GAGGCGGCGGCCTGAGCGCCAGGAGTCCGCGGACCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCGGCTCAAGCCCGTTaGGCAGGCGACCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAAQAR*AGDQGE
Trigger: TTCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCTCGCCCAGCTCCTTaGGCGCCACATAGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPRPAP*APHRGD
Trigger: ATCGCCTCTATGTGGCGCTCAAGGAGCTGGGCGAGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPGPHLR*QRVRGP
Trigger: AGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGGDARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGGAAGCTCGCGAGGCTaGGGCAGCGACGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPGSSRG*GSDGTP
Trigger: TGGGGTGCCGTCGCTGCCTCAGCCTCGCGAGCTTCC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGGAAGCTCGCGAGGCTaGGGCAGCGACGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLGSSRG*GSDGTP
Trigger: TGGGGTGCCGTCGCTGCCTCAGCCTCGCGAGCTTCC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCAGCTCCCCCTTGCTaGGCACACAGTACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPAPPC*AHSTGS
Trigger: TGAGCCTGTACTGTGTGCTCAGCAAGGGGGAGCTGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCGAGTGGATCCGCATaGGGCCGCGAGTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPASGSA*GREWAS
Trigger: CGAGGCCCACTCGCGGCCGCATGCGGATCCACTCGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCCGCCTCTCGCTCATaGTCTGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCAGAGCATGAGCGAGAGGCGGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCGGCCTCCACCAGGTaGTGCCCACATTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSASTR*CPHSRD
Trigger: GTCTCGGGAATGTGGGCAGCACCTGGTGGAGGCCGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCGCTCACTCTGGGCTaGGATGTCCCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSLTLG*DVPLQQ
Trigger: CTGCTGGAGGGGGACATCGCAGCCCAGAGTGAGCGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGCGCGCCGCCGTGCTaGCTGCTCCTGCAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPCAPPC*LLLQLR
Trigger: TCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTCTGCGCGCCGCCGTaGTGCCTGCTCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLCAPP*CLLLQL
Trigger: GAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCCAGGCCAGCCAAATaGAAAGGCTCGGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRARPAK*KGSAPG
Trigger: CCCGGGCGCCGAGCCTTTGCATTTGGCTGGCCTGGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGGGCGCGCTCTCCACTaGCCGTCGCTTCTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPGRALH*PSLLAH
Trigger: GTGCGCGAGAAGCGACGGGCAGTGGAGAGCGCGCCC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGGACCAGCGCCTCCCTaGGCTCCTCCCACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRGPAPP*APPTSR
Trigger: TCGGCTTGTGGGAGGAGCGCAGGGAGGCGCTGGTCC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTTGCGCACAGAGGCTaGCAGCTCCGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLAHRG*QLRFLL
Trigger: CAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSPTAL*RSPTNS
Trigger: GGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGAAGCGGCGTCGCTCCTaGAAAGGCTCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGKRRRS*KGSSRR
Trigger: GCGCCTGCTGGAGCCTTTGCAGGAGCGACGCCGCTT...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTTCGGCCTCTGGGCTaGGCAGCGAGGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLRPLG*AARPAR
Trigger: GCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCGGTCCAGGCGCTCTaGAGCTGCTCTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPVQAL*SCSWPR
Trigger: CCGTGGCCAAGAGCAGCTGCAGAGCGCCTGGACCGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCAGCCGCTCCCGCCCTaGGGTTCCTGTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRQPLPP*GSCLTG
Trigger: GCCAGTGAGACAGGAACCGCAGGGCGGGAGCGGCTG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGARRVR*MELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRAMASA*SPAYTV
Trigger: GACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCGATCTGGCCCGCGATaGCGTCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILRSGPR*RPSRRA
Trigger: TGCTCTCCTGGATGGACGGCATCGCGGGCCAGATCG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCGTGTCCGAGGCCCTaGGGGCCAAAGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPACPRP*GPKAPG
Trigger: GCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAAGAGGCGCCGGTTGTaGGCGCGCAGTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPKRRRL*ARSLLW
Trigger: CCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPKLCTS*SALLAS
Trigger: CGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACACCGCTTCGGCCTCTaGGCTGCGCAGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPHRFGL*AAQRGQ
Trigger: CTGGCCTCGCTGCGCAGCCCAGAGGCCGAAGCGGTG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCCACTCAGCCATGGTaGCCGCTGCTGTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSTQPW*PLLCDH
Trigger: GTGGTCACACAGCAGCGGCCACCATGGCTGAGTGGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSWHWV*VQVVPS
Trigger: TGACGGCACCACCTGAACCCAGACCCAGTGCCAGCT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCCGCTGCATGGAGCTaGCACTGGGTCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSAAWS*HWVWVQ
Trigger: CTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAGSAA*SWHWVW
Trigger: CCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPPARG*RWPRRA
Trigger: AGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGCAGGTCGCGGGCCTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSRSRA*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAGGCCCGCGACCTGCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAGCAGGTCGCGGGCCTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSRSRA*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAGGCCCGCGACCTGCT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRDRPSS*QVASSG
Trigger: GCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCTGTCATAGCCCCCTaGACGCAGCAAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPVIAP*TQQRRC
Trigger: GCAGCGCCTTTGCTGCGTCCAGGGGGCTATGACAGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLPRGL*QPVNAR
Trigger: CCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRSANS*RSDRGR
Trigger: CCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPAALCE*AEVAAR
Trigger: CCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGTGCAGGCTGAGCAGTaGTTCCCCACCATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILVQAEQ*FPTMRA
Trigger: GGCACGCATGGTGGGGAACCACTGCTCAGCCTGCAC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCGTACAGTAAGCCGTaGAGGCCTGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAYSKP*RPAAAA
Trigger: AGCAGCAGCTGCAGGCCTTCACGGCTTACTGTACGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTTCCACCTCCCCGGTaGGAGCGCGGTGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLPPPR*ERGAGA
Trigger: CGCGCCAGCACCGCGCTCTCACCGGGGAGGTGGAAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTTCCACCTCCCCGGTaGGAGCGCGGTGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLPPPR*ERGAGA
Trigger: CGCGCCAGCACCGCGCTCTCACCGGGGAGGTGGAAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSKRGP*AWISRR
Trigger: GCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACGCCCGGCACTGGCGTaGCAGCTGGGCGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRPALA*QLGDAF
Trigger: GAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGCRSGS*AVSQAS
Trigger: TGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCGTGCTGCACTGTGTaGGTGGGCGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSCCTV*VGGGGG
Trigger: GCCGCCACCTCCGCCCACTCACACAGTGCAGCACGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCGTGCTGCACTGTGTaGGTGGGCGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSCCTV*VGGGGG
Trigger: GCCGCCACCTCCGCCCACTCACACAGTGCAGCACGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCAGCTCCCCCTTGCTaGGCACACAGTACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPAPPC*AHSTGS
Trigger: TGAGCCTGTACTGTGTGCTCAGCAAGGGGGAGCTGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCCGCCTCTCGCTCATaGTCTGCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAASRS*SAFSSS
Trigger: TGAGCTGGAGAAGGCAGAGCATGAGCGAGAGGCGGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACATGGCTGCCTCCACTaGCGGCAGCTCATATCCGAA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPHGCLH*RQLISE
Trigger: TTCGGATATGAGCTGCCGGCAGTGGAGGCAGCCATG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCGCTCACTCTGGGCTaGGATGTCCCCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSLTLG*DVPLQQ
Trigger: CTGCTGGAGGGGGACATCGCAGCCCAGAGTGAGCGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCCTCCTCCAGCTCCTaGAGCAGCGCCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLASSSS*SSAHRL
Trigger: GAGCCTGTGGGCGCTGCTGCAGGAGCTGGAGGAGGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCACCACGCGCACCTaGAGAGCCACCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSTTRT*RATTSG
Trigger: GCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCAGCCAACCTCGAGGTaGGGCAGCCACTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGQPTSR*GSHSSS
Trigger: GCTAGACGAGTGGCTGCCGCACCTCGAGGTTGGCTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAAGCCGAGCAGTTTGTaGCAGCCAACCTCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPKPSSL*QPTSRC
Trigger: GCACCTCGAGGTTGGCTGGCACAAACTGCTCGGCTT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCCATGAACGCCTGGTaGCGGAGCCATCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAMNAW*RSHLLC
Trigger: GCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAACTCCTTGCTCGCCTaGTCCAGCGGAAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRNSLLA*SSGSAA
Trigger: GGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSPTAL*RSPTNS
Trigger: GGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAAGCGGCGTCGCTCCTaGAAAGGCTCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRKRRRS*KGSSRR
Trigger: GCGCCTGCTGGAGCCTTTGCAGGAGCGACGCCGCTT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRVPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCAGCCTGCAAGCCAGTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILQPASQ*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCACTGGCTTGCAGGCTG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCGGTCCAGGCGCTCTaGAGCTGCTCTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPVQAL*SCSWPR
Trigger: CCGTGGCCAAGAGCAGCTGCAGAGCGCCTGGACCGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTATCATGAGCAGCTCCTaGTCGCCCAGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILIMSSS*SPSHAS
Trigger: GGAGGCATGGCTGGGCGAGCAGGAGCTGCTCATGAT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGTCGGCGGCTGATTTaGTCACTGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCRRLI*SLSGCP
Trigger: GGGACACCCAGACAGTGAGCAAATCAGCCGCCGACA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRARRVR*MELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPAMASA*SPAYTV
Trigger: GACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPAMASA*SPAYTV
Trigger: GACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCGATCTGGCCCGCGATaGCGTCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGRSGPR*RPSRRA
Trigger: TGCTCTCCTGGATGGACGGCATCGCGGGCCAGATCG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTCCCAGGCCGCAGCTaGTTTTCGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLPGRS*FSEGLV
Trigger: CACGAGGCCTTCCGAAAAGCAGCTGCGGCCTGGGAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTGGCAGCCGGTCAATaGGCGGCTGGAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLAAGQ*AAGDAR
Trigger: CCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTGGCAGCCGGTCAATaGGCGGCTGGAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLAAGQ*AAGDAR
Trigger: CCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGTCGTGTCCAACGCTaGGGCTGTCGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRRVQR*GCRGRG
Trigger: CCCGCGGCCCCGACAGCCGCAGCGTTGGACACGACG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCGTCGAGCTCGCGCTTaGGCAGCAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRRARA*AAGSPR
Trigger: ACGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCCAGTGTCGCCAGCTaGCGCCTCAGGCCACCCACA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPSVAS*RLRPPT
Trigger: TGTGGGTGGCCTGAGGCGCCAGCTGGCGACACTGGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLGSGFR*CRQAGQ
Trigger: CTGCCCCGCCTGACGGCACCACCTGAACCCAGACCC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPDRPSS*QVASSG
Trigger: GCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPSLSS*AWISSA
Trigger: GGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGGCCGCCAGCTCTGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILWPPAL*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACAGAGCTGGCGGCCA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCCTGTCATAGCCCCCTaGACGCAGCAAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGPVIAP*TQQRRC
Trigger: GCAGCGCCTTTGCTGCGTCCAGGGGGCTATGACAGG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCCCGCCCTCACGCTTaGGGTTGCCCTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPRPHA*GCPHLW
Trigger: CCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCCGCCGTCTGCGCCTaGAGCTCGCCCACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFAAVCA*SSPTSR
Trigger: CCGAGAGGTGGGCGAGCTTCAGGCGCAGACGGCGGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGTGGCCGCTGCTGTGTaGCCACACTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGVAAAV*PHSISS
Trigger: CGAGCTGATTGAGTGTGGTCACACAGCAGCGGCCAC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGCAGCCACTCCCAGTaGCGGTCCCACTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRCSHSQ*RSHFSD
Trigger: GTCGGAGAAGTGGGACCGTCACTGGGAGTGGCTGCA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCCACCACGGCCTCCTaGGCAAACTGGTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRATTAS*ANWCTS
Trigger: GGAGGTACACCAGTTTGCTCAGGAGGCCGTGGTGGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRCRSGS*AVSQAS
Trigger: TGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLGDARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGGAAGCTCGCGAGGCTaGGGCAGCGACGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCGSSRG*GSDGTP
Trigger: TGGGGTGCCGTCGCTGCCTCAGCCTCGCGAGCTTCC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGVVGSV*PHRAIS
Trigger: CGAGATCGCCCGATGGGGTCAGACACTACCTACCAC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACGCAGCATTGGCGGCTaGGGGAGGTTCCCGATCCCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPRSIGG*GRFPIP
Trigger: TGGGATCGGGAACCTCCCGCAGCCGCCAATGCTGCG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTCGGCCTCCACCAGGTaGTGCCCACATTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSASTR*CPHSRD
Trigger: GTCTCGGGAATGTGGGCAGCACCTGGTGGAGGCCGA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCGTGCTGCCTGCTCCTaGAGCTCCGACAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRAACS*SSDRQP
Trigger: TGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTCTGCGCGCCGCCGTaGTGCCTGCTCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLCAPP*CLLLQL
Trigger: GAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGCAGGATCTTATGCTaGGCCAGCAGGCGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGCRILC*ASRRAV
Trigger: CACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCCTGCAGGATCTTATaGTGCGCCAGCAGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPCRIL*CASRRA
Trigger: CGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCCATGAACGCCTGGTaGCGGAGCCATCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAMNAW*RSHLLC
Trigger: GCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTTGCGCACAGAGGCTaGCAGCTCCGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLAHRG*QLRFLL
Trigger: CAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSSAQH*RISPNF
Trigger: GAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAACTCCTTGCTCGCCTaGTCCAGCGGAAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLNSLLA*SSGSAA
Trigger: GGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAAGCGGCGTCGCTCCTaGAAAGGCTCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLKRRRS*KGSSRR
Trigger: GCGCCTGCTGGAGCCTTTGCAGGAGCGACGCCGCTT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGTGCCTCGCTCTGTCTaGATGGCCAGTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPVPRSV*MASGSR
Trigger: GCGGCTGCCACTGGCCATGCAGACAGAGCGAGGCAC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTTCGGCCTCTGGGCTaGGCAGCGAGGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLRPLG*AARPAR
Trigger: GCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTGCTCGCCCAGCCATaGCTCCACCTCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLLAQP*LHLSHV
Trigger: GACGTGGCTGAGGTGGAGGCATGGCTGGGCGAGCAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTGCTCGCCCAGCCATaGCTCCACCTCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLLAQP*LHLSHV
Trigger: GACGTGGCTGAGGTGGAGGCATGGCTGGGCGAGCAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGATCATGAGCAGCTCCTaGTCGCCCAGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGIMSSS*SPSHAS
Trigger: GGAGGCATGGCTGGGCGAGCAGGAGCTGCTCATGAT...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGTCGGCGGCTGATTTaGTCACTGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILCRRLI*SLSGCP
Trigger: GGGACACCCAGACAGTGAGCAAATCAGCCGCCGACA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGTTCCAGGCTCACCCTaGGTTCCTCGCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRVPGSP*VPRPAP
Trigger: AGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCGCTGAAGAACTTATaGAGCTCCCGAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSLKNL*SSREAA
Trigger: CGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGRSCRS*SKARRV
Trigger: GACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCT...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGTCGCCGGATAAGCTaGTCCACCTCATCCACACTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCRRIS*STSSTL
Trigger: CAGTGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTCCCAGGCCGCAGCTaGTTTTCGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLPGRS*FSEGLV
Trigger: CACGAGGCCTTCCGAAAAGCAGCTGCGGCCTGGGAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGTGTCCGAGGCCCTaGGGGCCAAAGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALACPRP*GPKAPG
Trigger: GCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCGTGTCCGAGGCCCTaGGGGCCAAAGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCACPRP*GPKAPG
Trigger: GCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACGTCGTGTCCAACGCTaGGGCTGTCGGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRRVQR*GCRGRG
Trigger: CCCGCGGCCCCGACAGCCGCAGCGTTGGACACGACG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACGTCGAGCTCGCGCTTaGGCAGCAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRRARA*AAGSPR
Trigger: ACGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCGTCGAGCTCGCGCTTaGGCAGCAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRRARA*AAGSPR
Trigger: ACGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGTTCCCCACCATGCGTaGCCCCTGATGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRVPHHA*PLMLGL
Trigger: AAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAAC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCGCTGGTGGCTTTGTaGAGGCTGAGCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSLVAL*RLSSGS
Trigger: GGAACCACTGCTCAGCCTGCACAAAGCCACCAGCGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCGGCTGTTTTCATCTaGCACCACAAGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPAVFI*HHKSRA
Trigger: CGCTCTGCTCTTGTGGTGCCAGATGAAAACAGCCGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCGGCCCTGCGCCACTaGCTCCTCCCAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCAALRH*LLPVSP
Trigger: TGGCGACACTGGGAGGAGCCAGTGGCGCAGGGCCGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCTTGAGCGCGGCGTaGCGCGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSLSAA*RASSPS
Trigger: GGATGGGCTGCTGGCGCGCCACGCCGCGCTCAAGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLASKS*RALACV
Trigger: CACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCACCGCTTCGGCCTCTaGGCTGCGCAGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCHRFGL*AAQRGQ
Trigger: CTGGCCTCGCTGCGCAGCCCAGAGGCCGAAGCGGTG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTCTGCAGCTGCTCTTaGCCACGGCGCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLCSCS*PRRTAS
Trigger: CGAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTCTGCAGCTGCTCTTaGCCACGGCGCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLCSCS*PRRTAS
Trigger: CGAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGTAGCGCCCGGCACTaGCGTGACAGCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSSARH*RDSWAM
Trigger: CATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAGTAGCGCCCGGCACTaGCGTGACAGCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSSARH*RDSWAM
Trigger: CATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGTCCTGGCCCAGCTCTaGGGAGCCAGCTACCACCTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLVLAQL*GASYHL
Trigger: GAGGTGGTAGCTGGCTCCCCAGAGCTGGGCCAGGAC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGAGGCAGCGAGCAGCTaGGCCCGAGTGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPEAASS*ARVPMS
Trigger: ACTCATGGGCACTCGGGCCCAGCTGCTCGCTGCCTC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSWHWV*VQVVPS
Trigger: TGACGGCACCACCTGAACCCAGACCCAGTGCCAGCT...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPAGSAA*SWHWVW
Trigger: CCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGPSLSS*AWISSA
Trigger: GGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGGCCGCCAGCTCTGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGWPPAL*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACAGAGCTGGCGGCCA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGTCCGCGGACTCCTaGCGCTCAGGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWSADS*RSGRRL
Trigger: GAGGCGGCGGCCTGAGCGCCAGGAGTCCGCGGACCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTGGTCCGCGGACTCCTaGCGCTCAGGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFWSADS*RSGRRL
Trigger: GAGGCGGCGGCCTGAGCGCCAGGAGTCCGCGGACCA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALAALCE*AEVAAR
Trigger: CCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCCCGCCCTCACGCTTaGGGTTGCCCTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPRPHA*GCPHLW
Trigger: CCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGGTTCCACCTGCTGTTaGGATGGTCCTGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGGSTCC*DGPDRS
Trigger: GCTCCTGTCAGGACCATCTCAACAGCAGGTGGAACC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAGCCACTCCTTATTCTaGGCCAGCTCAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSHSLF*ASSAMN
Trigger: GTTCATGGCTGAGCTGGCTCAGAATAAGGAGTGGCT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCCGCCGTCTGCGCCTaGAGCTCGCCCACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNAAVCA*SSPTSR
Trigger: CCGAGAGGTGGGCGAGCTTCAGGCGCAGACGGCGGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILGPGSF*CAAGQP
Trigger: AGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPWRFC*VIETAP
Trigger: TGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGCAGCCACTCCCAGTaGCGGTCCCACTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCSHSQ*RSHFSD
Trigger: GTCGGAGAAGTGGGACCGTCACTGGGAGTGGCTGCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCCACCACGGCCTCCTaGGCAAACTGGTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPATTAS*ANWCTS
Trigger: GGAGGTACACCAGTTTGCTCAGGAGGCCGTGGTGGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSGPHLR*QRVRGP
Trigger: AGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGAGTGGCCTTCCCTTTaGCCAGCTCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLEWPSL*PALPWW
Trigger: CCACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCGTGCTGCACTGTGTaGGTGGGCGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSCCTV*VGGGGG
Trigger: GCCGCCACCTCCGCCCACTCACACAGTGCAGCACGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCCAGATGCACACGCTaGTCCTTCAGGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSRCTR*SFRNCR
Trigger: TCTGCAGTTCCTGAAGGAGCAGCGTGTGCATCTGGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCTAGCCCCAGGTGCTaGTCGGCTGTGCGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLASPRC*SAVRKA
Trigger: AGCTTTCCGCACAGCCGAGCAGCACCTGGGGCTAGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTCTCGCTCATGCTCTaGCTTCTCCAGCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLSLML*LLQLTP
Trigger: TGGGGTGAGCTGGAGAAGGCAGAGCATGAGCGAGAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGTGCTTCTTCATGGCTaGCTCCACTGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRVLLHG*LHCRQL
Trigger: GAGCTGCCGGCAGTGGAGGCAGCCATGAAGAAGCAC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCCGACAGACAGCCATaGACGTGGTTCACACGGTTG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSDRQP*TWFTRL
Trigger: CAACCGTGTGAACCACGTGCATGGCTGTCTGTCGGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCGCCGCCGTGCTGCCTaGTCCTGCAGCTCCGACAGA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRRRAA*SCSSDR
Trigger: TCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCCAGGCCAGCCAAATaGAAAGGCTCGGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALARPAK*KGSAPG
Trigger: CCCGGGCGCCGAGCCTTTGCATTTGGCTGGCCTGGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATACGCTGCAGGCGACCTaGCGCCGCAACCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNTLQAT*RRNRLA
Trigger: GGCGAGGCGGTTGCGGCGGCAGGTCGCCTGCAGCGT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPPPTP*SPAPAE
Trigger: TTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 10 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPPPTP*SPAPAE
Trigger: TTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSPTAL*RSPTNS
Trigger: GGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCAGCCTGCAAGCCAGTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRQPASQ*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCACTGGCTTGCAGGCTG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACTTCGGCCTCTGGGCTaGGCAGCGAGGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSLRPLG*AARPAR
Trigger: GCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCAGGCGCTCTGCAGCTaGTCTTGGCCACGGCGCACC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCQALCS*SWPRRT
Trigger: GGTGCGCCGTGGCCAAGAGCAGCTGCAGAGCGCCTG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCAGGCGCTCTGCAGCTaGTCTTGGCCACGGCGCACC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALQALCS*SWPRRT
Trigger: GGTGCGCCGTGGCCAAGAGCAGCTGCAGAGCGCCTG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGTTCCAGGCTCACCCTaGGTTCCTCGCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLVPGSP*VPRPAP
Trigger: AGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCAGCCGCTCCCGCCCTaGGGTTCCTGTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALQPLPP*GSCLTG
Trigger: GCCAGTGAGACAGGAACCGCAGGGCGGGAGCGGCTG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCAGCCGCTCCCGCCCTaGGGTTCCTGTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCQPLPP*GSCLTG
Trigger: GCCAGTGAGACAGGAACCGCAGGGCGGGAGCGGCTG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAGCCATGGTGGCCGCTaGTGTGTGACCACACTCAAT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSHGGR*CVTTLN
Trigger: ATTGAGTGTGGTCACACAGCAGCGGCCACCATGGCT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRSCRS*SKARRV
Trigger: GACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCAMASA*SPAYTV
Trigger: GACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCGATCTGGCCCGCGATaGCGTCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRSGPR*RPSRRA
Trigger: TGCTCTCCTGGATGGACGGCATCGCGGGCCAGATCG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCTCATCCACACTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPHPHC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGTGTGGATGAGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILKGVGG*LLCSAL
Trigger: CAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTGGCAGCCGGTCAATaGGCGGCTGGAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLAAGQ*AAGDAR
Trigger: CCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGTTCCCCACCATGCGTaGCCCCTGATGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPVPHHA*PLMLGL
Trigger: AAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAAC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCGCTGGTGGCTTTGTaGAGGCTGAGCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSLVAL*RLSSGS
Trigger: GGAACCACTGCTCAGCCTGCACAAAGCCACCAGCGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGGAGCAAGAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILGARTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTCTTGCTCC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCCTCACGCTTGGGGTTaGCCTCATCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILPHAWG*PHLWMM
Trigger: CATCATCCACAGATGAGGGCAACCCCAAGCGTGAGG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCATGCGGCCGCGAGTaGGCCTCGGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNACGRE*ASAAAP
Trigger: GGGAGCAGCTGCCGAGGCCCACTCGCGGCCGCATGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGTGAGAGCGCGGTGCTaGCGCGCCAGGCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNVRARC*RARRRL
Trigger: CAGCCGTCGCCTGGCGCGCCAGCACCGCGCTCTCAC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCGGCCCTGCGCCACTaGCTCCTCCCAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFAALRH*LLPVSP
Trigger: TGGCGACACTGGGAGGAGCCAGTGGCGCAGGGCCGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCACCTCATCGGAGCTaGGATGACCTCCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILAPHRS*DDLLLP
Trigger: TGGTAGAAGGAGGTCATCCCAGCTCCGATGAGGTGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCCTTGAGCGCGGCGTaGCGCGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSLSAA*RASSPS
Trigger: GGATGGGCTGCTGGCGCGCCACGCCGCGCTCAAGGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGCACCGCAAGCGCCTaGCACAGGTCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSTASA*HRSLRK
Trigger: CTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTGCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGAGCTGGCGCGCCTTaGCCTGTGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRAGAP*PVWCSP
Trigger: TGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCGSGFR*CRQAGQ
Trigger: CTGCCCCGCCTGACGGCACCACCTGAACCCAGACCC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPPARG*RWPRRA
Trigger: AGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCDRPSS*QVASSG
Trigger: GCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALDRPSS*QVASSG
Trigger: GCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCTGTCATAGCCCCCTaGACGCAGCAAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPVIAP*TQQRRC
Trigger: GCAGCGCCTTTGCTGCGTCCAGGGGGCTATGACAGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCTGTCATAGCCCCCTaGACGCAGCAAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPVIAP*TQQRRC
Trigger: GCAGCGCCTTTGCTGCGTCCAGGGGGCTATGACAGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCGGGCTTGAGCTCCTaGCGCACATACCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSGLSS*RTYPTR
Trigger: CCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRSANS*RSDRGR
Trigger: CCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTCAAGCCCGTTaGGCAGGCGACCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALAAQAR*AGDQGE
Trigger: TTCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCGGCTCAAGCCCGTTaGGCAGGCGACCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCAAQAR*AGDQGE
Trigger: TTCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFAALCE*AEVAAR
Trigger: CCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGTGCAGGCTGAGCAGTaGTTCCCCACCATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPVQAEQ*FPTMRA
Trigger: GGCACGCATGGTGGGGAACCACTGCTCAGCCTGCAC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGTTTGCTTTGGATGCTaGAGAGTAGCACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPVCFGC*RVAPPG
Trigger: ACCTGGAGGTGCTACTCTTCAGCATCCAAAGCAAAC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCACCACTCCTCCACCTaGGACTCCATGGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGHHSST*DSMDCN
Trigger: GTTACAGTCCATGGAGTCTCAGGTGGAGGAGTGGTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACGCCCGGCACTGGCGTaGCAGCTGGGCGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRPALA*QLGDAF
Trigger: GAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGCCCGGCACTGGCGTaGCAGCTGGGCGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRPALA*QLGDAF
Trigger: GAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACATCCACCTGGCGGCTaGGCTGGTAGAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLHPPGG*AGRAST
Trigger: AGTACTGGCTCTACCAGCTCAGCCGCCAGGTGGATG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACATCCACCTGGCGGCTaGGCTGGTAGAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPHPPGG*AGRAST
Trigger: AGTACTGGCTCTACCAGCTCAGCCGCCAGGTGGATG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSSICP*SSRASL
Trigger: CAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSSICP*SSRASL
Trigger: CAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGPHLR*QRVRGP
Trigger: AGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCGTGCTGCACTGTGTaGGTGGGCGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSCCTV*VGGGGG
Trigger: GCCGCCACCTCCGCCCACTCACACAGTGCAGCACGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCAGCTCCCCCTTGCTaGGCACACAGTACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPAPPC*AHSTGS
Trigger: TGAGCCTGTACTGTGTGCTCAGCAAGGGGGAGCTGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCAGCTCCCCCTTGCTaGGCACACAGTACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPAPPC*AHSTGS
Trigger: TGAGCCTGTACTGTGTGCTCAGCAAGGGGGAGCTGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPVVGSV*PHRAIS
Trigger: CGAGATCGCCCGATGGGGTCAGACACTACCTACCAC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGCAGCATTGGCGGCTaGGGGAGGTTCCCGATCCCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRSIGG*GRFPIP
Trigger: TGGGATCGGGAACCTCCCGCAGCCGCCAATGCTGCG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCCTGCAGCTGCTGCTaGACCCCACTCAGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRACSCC*TPLSEL
Trigger: TAACTCACTGAGTGGGGTGCAGCAGCAGCTGCAGGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGTCAATATCCCAGATaGCACAGCCTTCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCQYPR*HSLLEA
Trigger: TGCCTCGAGAAGGCTGTGGCATCTGGGATATTGACA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAGTTCCAACTTCTCCTaGCGGATGAGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSSNFS*RMSSAL
Trigger: CAGAGCTGAGCTCATCCGGCAGGAGAAGTTGGAACT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGTGCTTCTTCATGGCTaGCTCCACTGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPVLLHG*LHCRQL
Trigger: GAGCTGCCGGCAGTGGAGGCAGCCATGAAGAAGCAC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACGCCGCCGTGCTGCCTaGTCCTGCAGCTCCGACAGA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRRRAA*SCSSDR
Trigger: TCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGCAGGATCTTATGCTaGGCCAGCAGGCGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCRILC*ASRRAV
Trigger: CACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCCGCCCAGCTCGCCCTaGAGGATCTTATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALPPSSP*RILCCA
Trigger: GGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCCACCACGCGCACCTaGAGAGCCACCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSTTRT*RATTSG
Trigger: GCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTGGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGGACCAGCGCCTCCCTaGGCTCCTCCCACAAGCCGA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSGPAPP*APPTSR
Trigger: TCGGCTTGTGGGAGGAGCGCAGGGAGGCGCTGGTCC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCCATGAACGCCTGGTaGCGGAGCCATCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLAMNAW*RSHLLC
Trigger: GCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGCTCCGGTTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAACCGGAGCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTTGCGCACAGAGGCTaGCAGCTCCGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLAHRG*QLRFLL
Trigger: CAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAACTCCTTGCTCGCCTaGTCCAGCGGAAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALNSLLA*SSGSAA
Trigger: GGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSPTAL*RSPTNS
Trigger: GGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTGCTCGCCCAGCCATaGCTCCACCTCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLLAQP*LHLSHV
Trigger: GACGTGGCTGAGGTGGAGGCATGGCTGGGCGAGCAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAATCATGAGCAGCTCCTaGTCGCCCAGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLIMSSS*SPSHAS
Trigger: GGAGGCATGGCTGGGCGAGCAGGAGCTGCTCATGAT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCATCATGAGCAGCTCCTaGTCGCCCAGCCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPIMSSS*SPSHAS
Trigger: GGAGGCATGGCTGGGCGAGCAGGAGCTGCTCATGAT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGAGCCATGGTGGCCGCTaGTGTGTGACCACACTCAAT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSHGGR*CVTTLN
Trigger: ATTGAGTGTGGTCACACAGCAGCGGCCACCATGGCT...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALARRVR*MELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPRSCRS*SKARRV
Trigger: GACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRSCRS*SKARRV
Trigger: GACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGGGACACGAGGAGCTaGAGGTCGTGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRWDTRS*RSCSKA
Trigger: AGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGTCGCCGGATAAGCTaGTCCACCTCATCCACACTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGCRRIS*STSSTL
Trigger: CAGTGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCGTCGAGCTCGCGCTTaGGCAGCAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRRARA*AAGSPR
Trigger: ACGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTCGCTGGTGGCTTTGTaGAGGCTGAGCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSLVAL*RLSSGS
Trigger: GGAACCACTGCTCAGCCTGCACAAAGCCACCAGCGA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGGAGCAAGAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGGARTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTCTTGCTCC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCCAGTGTCGCCAGCTaGCGCCTCAGGCCACCCACA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPSVAS*RLRPPT
Trigger: TGTGGGTGGCCTGAGGCGCCAGCTGGCGACACTGGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAGCACCGCAAGCGCCTaGCACAGGTCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSTASA*HRSLRK
Trigger: CTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTGCT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAACCTGCATCTTTTGCTaGTTCAGCTCCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPTCIFC*FSSIVV
Trigger: CACCACGATGGAGCTGAACCAGCAAAAGATGCAGGT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCCTGCATCAGTTGCTaGCCCTCCCTTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSCISC*PSLSIF
Trigger: GAAGATAGAAAGGGAGGGCCAGCAACTGATGCAGGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLASKS*RALACV
Trigger: CACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLKLCTS*SALLAS
Trigger: CGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPKLCTS*SALLAS
Trigger: CGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGTAACTTCTTGAGCTaGCTGTTGACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCNFLS*LLTVAR
Trigger: CCTGGCCACTGTCAACAGCCAGCTCAAGAAGTTACA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPFLMCC*TACKPV
Trigger: CACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTCTGCAGCTGCTCTTaGCCACGGCGCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLCSCS*PRRTAS
Trigger: CGAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGTAGCGCCCGGCACTaGCGTGACAGCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSSARH*RDSWAM
Trigger: CATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCTTCCACTCAGCCATaGTGGCCGCTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPSTQP*WPLLCD
Trigger: GTCACACAGCAGCGGCCACCATGGCTGAGTGGAAGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCTTCCACTCAGCCATaGTGGCCGCTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPSTQP*WPLLCD
Trigger: GTCACACAGCAGCGGCCACCATGGCTGAGTGGAAGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFGSGFR*CRQAGQ
Trigger: CTGCCCCGCCTGACGGCACCACCTGAACCCAGACCC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSGSGFR*CRQAGQ
Trigger: CTGCCCCGCCTGACGGCACCACCTGAACCCAGACCC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALAGSAA*SWHWVW
Trigger: CCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGCAGGTCGCGGGCCTaGCTGTGGAAGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSRSRA*LWKRRA
Trigger: CGCCCTGCGCTTCCACAGCCAGGCCCGCGACCTGCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPSLSS*AWISSA
Trigger: GGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPSLSS*AWISSA
Trigger: GGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPSLSS*AWISSA
Trigger: GGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLPRGL*QPVNAR
Trigger: CCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCLPRGL*QPVNAR
Trigger: CCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNRSANS*RSDRGR
Trigger: CCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCACACGGTTGCAAATaGCCTGAGGGTCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSHGCK*PEGRRA
Trigger: AGCCCTGCGACCCTCAGGTCATTTGCAACCGTGTGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTGTTGAGATGGTCCTaGCAGGAGCGCACCTCATCG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLLRWS*QERTSS
Trigger: CGATGAGGTGCGCTCCTGTCAGGACCATCTCAACAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCACCACTCCTCCACCTaGGACTCCATGGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRHHSST*DSMDCN
Trigger: GTTACAGTCCATGGAGTCTCAGGTGGAGGAGTGGTG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCGCCCGGCACTGGCGTaGCAGCTGGGCGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNRPALA*QLGDAF
Trigger: GAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAAGCACCTCCACCGATaGCACATCCCTGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRKHLHR*HIPGFV
Trigger: GACAAACCCAGGGATGTGTCATCGGTGGAGGTGCTT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTGCAGCCACTCCCAGTaGCGGTCCCACTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCCSHSQ*RSHFSD
Trigger: GTCGGAGAAGTGGGACCGTCACTGGGAGTGGCTGCA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALCRSGS*AVSQAS
Trigger: TGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFGDARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGAGTGGCCTTCCCTTTaGCCAGCTCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALEWPSL*PALPWW
Trigger: CCACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCACCATGCGTGCCCCCTaGTGCTGGGCCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCTMRAP*CWAFGV
Trigger: GACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGGCTTTGTGCAGGCTaGGCAGTGGTTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLWLCAG*AVVPHH
Trigger: ATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGGCTTTGTGCAGGCTaGGCAGTGGTTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPWLCAG*AVVPHH
Trigger: ATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGGCTTTGTGCAGGCTaGGCAGTGGTTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPWLCAG*AVVPHH
Trigger: ATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGTGCTAGCCCCAGGTaGTGCTCGGCTGTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRASPR*CSAVRK
Trigger: TTTCCGCACAGCCGAGCAGCACCTGGGGCTAGCACG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGTCAATATCCCAGATaGCACAGCCTTCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILCQYPR*HSLLEA
Trigger: TGCCTCGAGAAGGCTGTGGCATCTGGGATATTGACA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACATGGCTGCCTCCACTaGCGGCAGCTCATATCCGAA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPHGCLH*RQLISE
Trigger: TTCGGATATGAGCTGCCGGCAGTGGAGGCAGCCATG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCATGGCCAGCAGCCACTaGTCTTTCTCCCCGATCCAC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPMASSH*SFSPIH
Trigger: GTGGATCGGGGAGAAAGAGCAGTGGCTGCTGGCCAT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCGCTCATCTCCTCTTTaGGCTGTTCCACCAACTCCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGRSSPL*AVPPTP
Trigger: TGGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCAGCCAACCTCGAGGTaGGGCAGCCACTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCQPTSR*GSHSSS
Trigger: GCTAGACGAGTGGCTGCCGCACCTCGAGGTTGGCTG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCGCCACCTCCTGGTTaGGCAGCACCGCAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNAPPPG*AAPQAP
Trigger: AGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGCTCCGGTTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAACCGGAGCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAACTCCTTGCTCGCCTaGTCCAGCGGAAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSNSLLA*SSGSAA
Trigger: GGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALPPPTP*SPAPAE
Trigger: TTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAAGCGGCGTCGCTCCTaGAAAGGCTCCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSKRRRS*KGSSRR
Trigger: GCGCCTGCTGGAGCCTTTGCAGGAGCGACGCCGCTT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCGGTCCAGGCGCTCTaGAGCTGCTCTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPVQAL*SCSWPR
Trigger: CCGTGGCCAAGAGCAGCTGCAGAGCGCCTGGACCGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGTCGGCGGCTGATTTaGTCACTGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCRRLI*SLSGCP
Trigger: GGGACACCCAGACAGTGAGCAAATCAGCCGCCGACA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTTCCAGGCTCACCCTaGGTTCCTCGCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVPGSP*VPRPAP
Trigger: AGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGGGACACGAGGAGCTaGAGGTCGTGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPWDTRS*RSCSKA
Trigger: AGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGGGACACGAGGAGCTaGAGGTCGTGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLWDTRS*RSCSKA
Trigger: AGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNWAAPS*SCRTWD
Trigger: GTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCGATCTGGCCCGCGATaGCGTCCATCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRSGPR*RPSRRA
Trigger: TGCTCTCCTGGATGGACGGCATCGCGGGCCAGATCG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCCTCATCCACACTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALPHPHC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGTGTGGATGAGG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTCCCAGGCCGCAGCTaGTTTTCGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLPGRS*FSEGLV
Trigger: CACGAGGCCTTCCGAAAAGCAGCTGCGGCCTGGGAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRKGVGG*LLCSAL
Trigger: CAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTGGCAGCCGGTCAATaGGCGGCTGGAGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLAAGQ*AAGDAR
Trigger: CCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGTCGAGCTCGCGCTTaGGCAGCAGGAAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRRARA*AAGSPR
Trigger: ACGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCGCTGGTGGCTTTGTaGAGGCTGAGCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSLVAL*RLSSGS
Trigger: GGAACCACTGCTCAGCCTGCACAAAGCCACCAGCGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCGCGCAGTTTGCTTTaGATGCTGAAGAGTAGCACC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGARSLL*MLKSST
Trigger: GGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGGACACTGTCACGCTaGGCAGCCACCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNRTLSR*AATRRA
Trigger: TGCCCGGCGGGTGGCTGCCCAGCGTGACAGTGTCCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCGCCAGGCGACGGCTaGACGCTTCGTCGTGACCAA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFAPGDG*TLRRDQ
Trigger: TTGGTCACGACGAAGCGTCCAGCCGTCGCCTGGCGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAATCGGGCACACGCATaGCCAGCAGCCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPNRAHA*PAATAL
Trigger: AAGAGCAGTGGCTGCTGGCCATGCGTGTGCCCGATT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGCTGCAGCACAAGCTaGTCCAGTAGTTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCCSTS*SSSFCI
Trigger: GATGCAAAAACTACTGGACCAGCTTGTGCTGCAGCA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCAGCCATGAACGCCTaGTGCCGGAGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSAMNA*CRSHLL
Trigger: CAAGAGATGGCTCCGGCACCAGGCGTTCATGGCTGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTCAGCCATGAACGCCTaGTGCCGGAGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSAMNA*CRSHLL
Trigger: CAAGAGATGGCTCCGGCACCAGGCGTTCATGGCTGA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFLASKS*RALACV
Trigger: CACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGTCTGCATGGCCAGTaGCAGCCGCTCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCLHGQ*QPLLNP
Trigger: TGGGTTCAAGAGCGGCTGCCACTGGCCATGCAGACA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGTCTGCATGGCCAGTaGCAGCCGCTCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCLHGQ*QPLLNP
Trigger: TGGGTTCAAGAGCGGCTGCCACTGGCCATGCAGACA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGTAGCGCCCGGCACTaGCGTGACAGCTGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSSARH*RDSWAM
Trigger: CATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGTCCTGGCCCAGCTCTaGGGAGCCAGCTACCACCTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFVLAQL*GASYHL
Trigger: GAGGTGGTAGCTGGCTCCCCAGAGCTGGGCCAGGAC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGAGGCAGCGAGCAGCTaGGCCCGAGTGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFEAASS*ARVPMS
Trigger: ACTCATGGGCACTCGGGCCCAGCTGCTCGCTGCCTC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGSGFR*CRQAGQ
Trigger: CTGCCCCGCCTGACGGCACCACCTGAACCCAGACCC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGCAGCTGCCGTACCTaGGACACGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALCSCRT*DTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCCCCAGTAAGGGGGTaGGTGGCTGCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPAPVRG*VAAYSV
Trigger: AACAGAGTAAGCAGCCACCCACCCCCTTACTGGGGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRSMRG*RRSGLS
Trigger: GCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTGATGCTGGGCCTTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLMLGL*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAAGGCCCAGCATCAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGTGCAGGCTGAGCAGTaGTTCCCCACCATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALVQAEQ*FPTMRA
Trigger: GGCACGCATGGTGGGGAACCACTGCTCAGCCTGCAC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTGCAGGCTGAGCAGTaGTTCCCCACCATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVQAEQ*FPTMRA
Trigger: GGCACGCATGGTGGGGAACCACTGCTCAGCCTGCAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCTCTCCCAGCGAGCTaGAGGGTTGTTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPALPAS*RVVVVG
Trigger: TCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGTACAGTAAGCCGTaGAGGCCTGCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALAYSKP*RPAAAA
Trigger: AGCAGCAGCTGCAGGCCTTCACGGCTTACTGTACGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAGGCTCTCTGCAGCTTaGACCGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRLSAA*TATCIF
Trigger: AAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGCCACTCCTTATTCTaGGCCAGCTCAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSHSLF*ASSAMN
Trigger: GTTCATGGCTGAGCTGGCTCAGAATAAGGAGTGGCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLGPGSF*CAAGQP
Trigger: AGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTGGCCGCTGCTGTGTaGCCACACTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVAAAV*PHSISS
Trigger: CGAGCTGATTGAGTGTGGTCACACAGCAGCGGCCAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGTGGCCGCTGCTGTGTaGCCACACTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALVAAAV*PHSISS
Trigger: CGAGCTGATTGAGTGTGGTCACACAGCAGCGGCCAC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSSICP*SSRASL
Trigger: CAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAAGCACCTCCACCGATaGCACATCCCTGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPKHLHR*HIPGFV
Trigger: GACAAACCCAGGGATGTGTCATCGGTGGAGGTGCTT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGCCACCACGGCCTCCTaGGCAAACTGGTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSATTAS*ANWCTS
Trigger: GGAGGTACACCAGTTTGCTCAGGAGGCCGTGGTGGC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCCACCACGGCCTCCTaGGCAAACTGGTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFATTAS*ANWCTS
Trigger: GGAGGTACACCAGTTTGCTCAGGAGGCCGTGGTGGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSCRSGS*AVSQAS
Trigger: TGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGDARA*APGAHT
Trigger: GGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGAGTGGCCTTCCCTTTaGCCAGCTCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSEWPSL*PALPWW
Trigger: CCACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCCAGCTCCCCCTTGCTaGGCACACAGTACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCPAPPC*AHSTGS
Trigger: TGAGCCTGTACTGTGTGCTCAGCAAGGGGGAGCTGG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAACCATGCGTGCCCCCTaGTGCTGGGCCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSTMRAP*CWAFGV
Trigger: GACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVVGSV*PHRAIS
Trigger: CGAGATCGCCCGATGGGGTCAGACACTACCTACCAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALVVGSV*PHRAIS
Trigger: CGAGATCGCCCGATGGGGTCAGACACTACCTACCAC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGTTGCAAATGACCTaGGGGTCGCAGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRLQMT*GSQGWE
Trigger: CTCCCAGCCCTGCGACCCTCAGGTCATTTGCAACCG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAAGGCCTGCAGCTGCTaGTGCACCCCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALKACSC*CTPLSE
Trigger: CTCACTGAGTGGGGTGCAGCAGCAGCTGCAGGCCTT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAAGGCCTGCAGCTGCTaGTGCACCCCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCKACSC*CTPLSE
Trigger: CTCACTGAGTGGGGTGCAGCAGCAGCTGCAGGCCTT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGTGCTGCCTGCTCCTaGAGCTCCGACAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRAACS*SSDRQP
Trigger: TGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCCTGCAGGATCTTATaGTGCGCCAGCAGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPCRIL*CASRRA
Trigger: CGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCGCCCAGCTCGCCCTaGAGGATCTTATGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPPSSP*RILCCA
Trigger: GGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACGGAGCCATCTCTTGTaGAGCTTGTGGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPRSHLL*SLWLSS
Trigger: GGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACGGAGCCATCTCTTGTaGAGCTTGTGGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRSHLL*SLWLSS
Trigger: GGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTTCTCCTGCATCAGTTaGTGGCCCTCCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGFSCIS*WPSLSI
Trigger: GATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPPPTP*SPAPAE
Trigger: TTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCAGCCTGCAAGCCAGTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALQPASQ*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCACTGGCTTGCAGGCTG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGTTCCAGGCTCACCCTaGGTTCCTCGCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFVPGSP*VPRPAP
Trigger: AGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGCCATGGTGGCCGCTaGTGTGTGACCACACTCAAT +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSHGGR*CVTTLN
Trigger: ATTGAGTGTGGTCACACAGCAGCGGCCACCATGGCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCGCTGAAGAACTTATaGAGCTCCCGAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSLKNL*SSREAA
Trigger: CGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCTCATCCACACTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPHPHC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGTGTGGATGAGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCTCATCCACACTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPHPHC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGTGTGGATGAGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPKGVGG*LLCSAL
Trigger: CAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGTTCCCCACCATGCGTaGCCCCTGATGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSVPHHA*PLMLGL
Trigger: AAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAAC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCCTCACGCTTGGGGTTaGCCTCATCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPPHAWG*PHLWMM
Trigger: CATCATCCACAGATGAGGGCAACCCCAAGCGTGAGG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAAGGGTTGTTGTTGTTaGAGACTGCTGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRKGCCC*RLLGPP
Trigger: TGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAAGAGGCGCCGGTTGTaGGCGCGCAGTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALKRRRL*ARSLLW
Trigger: CCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCACCTCATCGGAGCTaGGATGACCTCCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPAPHRS*DDLLLP
Trigger: TGGTAGAAGGAGGTCATCCCAGCTCCGATGAGGTGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTCCTGCATCAGTTGCTaGCCCTCCCTTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGSCISC*PSLSIF
Trigger: GAAGATAGAAAGGGAGGGCCAGCAACTGATGCAGGA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGAGCTGGCGCGCCTTaGCCTGTGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRAGAP*PVWCSP
Trigger: TGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGFLMCC*TACKPV
Trigger: CACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCCACTCAGCCATGGTaGCCGCTGCTGTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSTQPW*PLLCDH
Trigger: GTGGTCACACAGCAGCGGCCACCATGGCTGAGTGGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCACTCAGCCATGGTaGCCGCTGCTGTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSTQPW*PLLCDH
Trigger: GTGGTCACACAGCAGCGGCCACCATGGCTGAGTGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCCGCTGCATGGAGCTaGCACTGGGTCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSAAWS*HWVWVQ
Trigger: CTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNAGSAA*SWHWVW
Trigger: CCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCGGGCTTGAGCTCCTaGCGCACATACCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSGLSS*RTYPTR
Trigger: CCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLPRGL*QPVNAR
Trigger: CCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCCCGCCCTCACGCTTaGGGTTGCCCTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPRPHA*GCPHLW
Trigger: CCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCTCGCCCAGCTCCTTaGGCGCCACATAGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPRPAP*APHRGD
Trigger: ATCGCCTCTATGTGGCGCTCAAGGAGCTGGGCGAGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGTGGCCGCTGCTGTGTaGCCACACTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFVAAAV*PHSISS
Trigger: CGAGCTGATTGAGTGTGGTCACACAGCAGCGGCCAC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSSICP*SSRASL
Trigger: CAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPWRFC*VIETAP
Trigger: TGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGCAGCCACTCCCAGTaGCGGTCCCACTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNCSHSQ*RSHFSD
Trigger: GTCGGAGAAGTGGGACCGTCACTGGGAGTGGCTGCA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGAGTGGCCTTCCCTTTaGCCAGCTCTCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNEWPSL*PALPWW
Trigger: CCACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCCTGCCTCTTTCTCCTaGAGTTGCTCCACAATATCA +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGPASFS*SCSTIS
Trigger: TGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATACCATGCGTGCCCCCTaGTGCTGGGCCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNTMRAP*CWAFGV
Trigger: GACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGTTGTTGTTGGAGACTaGTGGGCCCTCCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLVVVGD*WALHVV
Trigger: GACAACATGGAGGGCCCAGCAGTCTCCAACAACAAC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCAGATGCACACGCTaGTCCTTCAGGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSRCTR*SFRNCR
Trigger: TCTGCAGTTCCTGAAGGAGCAGCGTGTGCATCTGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCCTGCAGCTGCTGCTaGACCCCACTCAGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCACSCC*TPLSEL
Trigger: TAACTCACTGAGTGGGGTGCAGCAGCAGCTGCAGGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTCTCGCTCATGCTCTaGCTTCTCCAGCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLSLML*LLQLTP
Trigger: TGGGGTGAGCTGGAGAAGGCAGAGCATGAGCGAGAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACGCTCATCTCCTCTTTaGGCTGTTCCACCAACTCCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRSSPL*AVPPTP
Trigger: TGGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAAGCCGAGCAGTTTGTaGCAGCCAACCTCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALKPSSL*QPTSRC
Trigger: GCACCTCGAGGTTGGCTGGCACAAACTGCTCGGCTT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCCACCTGCATCTTTTaGTGGTTCAGCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLATCIF*WFSSIV
Trigger: CACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGCCATGAACGCCTGGTaGCGGAGCCATCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSAMNAW*RSHLLC
Trigger: GCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCCATGAACGCCTGGTaGCGGAGCCATCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFAMNAW*RSHLLC
Trigger: GCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTTCTCCTGCATCAGTTaGTGGCCCTCCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRFSCIS*WPSLSI
Trigger: GATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPPPTP*SPAPAE
Trigger: TTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGTTCCAGGCTCACCCTaGGTTCCTCGCCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNVPGSP*VPRPAP
Trigger: AGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRSCRS*SKARRV
Trigger: GACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCTCATCCACACTGCTaGCCAGCTCCCGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPHPHC*PAPGSA
Trigger: TGCAGAGCCGGGAGCTGGGCAGCAGTGTGGATGAGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTCCCAGGCCGCAGCTaGTTTTCGGAAGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLPGRS*FSEGLV
Trigger: CACGAGGCCTTCCGAAAAGCAGCTGCGGCCTGGGAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGTTCCCCACCATGCGTaGCCCCTGATGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNVPHHA*PLMLGL
Trigger: AAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAAC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTACAGGTCTCCAATGTaGCAGCCCACGCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFYRSPM*QPTRAR
Trigger: CCTTGCCCGCGTGGGCTGCCACATTGGAGACCTGTA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAGGTCCACAGTGCGATaGATCCAGGCCAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRSTVR*IQANSS
Trigger: GGAGCTGTTGGCCTGGATCCATCGCACTGTGGACCT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCGCGCAGTTTGCTTTaGATGCTGAAGAGTAGCACC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPARSLL*MLKSST
Trigger: GGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTTCGTGCTTCTTCATaGCTGCCTCCACTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLRASS*LPPLPA
Trigger: TGCCGGCAGTGGAGGCAGCCATGAAGAAGCACGAAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCAATGTCTGCCTCAATaGCTTCGTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGQCLPQ*LRASSW
Trigger: CCATGAAGAAGCACGAAGCCATTGAGGCAGACATTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTAGCAGCGCTTCACTaGCAGCCACGATGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLAALH*QPRCAR
Trigger: ACGCGCGCATCGTGGCTGCCAGTGAAGCGCTGCTAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGAGCTGGCGCGCCTTaGCCTGTGTGGTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNRAGAP*PVWCSP
Trigger: TGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFKLCTS*SALLAS
Trigger: CGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRFLMCC*TACKPV
Trigger: CACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCTTCCACTCAGCCATaGTGGCCGCTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPSTQP*WPLLCD
Trigger: GTCACACAGCAGCGGCCACCATGGCTGAGTGGAAGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCTTCCACTCAGCCATaGTGGCCGCTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPSTQP*WPLLCD
Trigger: GTCACACAGCAGCGGCCACCATGGCTGAGTGGAAGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSWHWV*VQVVPS
Trigger: TGACGGCACCACCTGAACCCAGACCCAGTGCCAGCT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSWHWV*VQVVPS
Trigger: TGACGGCACCACCTGAACCCAGACCCAGTGCCAGCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCCGCTGCATGGAGCTaGCACTGGGTCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSAAWS*HWVWVQ
Trigger: CTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCCCCAGTAAGGGGGTaGGTGGCTGCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCAPVRG*VAAYSV
Trigger: AACAGAGTAAGCAGCCACCCACCCCCTTACTGGGGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCCCCAGTAAGGGGGTaGGTGGCTGCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALAPVRG*VAAYSV
Trigger: AACAGAGTAAGCAGCCACCCACCCCCTTACTGGGGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGCCGCCAGCTCTGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWPPAL*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACAGAGCTGGCGGCCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTGATGCTGGGCCTTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLMLGL*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAAGGCCCAGCATCAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCTGATGCTGGGCCTTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPLMLGL*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAAGGCCCAGCATCAG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGTGCAGGCTGAGCAGTaGTTCCCCACCATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNVQAEQ*FPTMRA
Trigger: GGCACGCATGGTGGGGAACCACTGCTCAGCCTGCAC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
3UTR CAA 72 bp AGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTaGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: RPTVAHPQSFRP*RMRSCLCVHSA
Trigger: TGCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTCTCCAGCTGGTGGTaGAATTCTGGATGTTTACCT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLSSWW*NSGCLP
Trigger: AGGTAAACATCCAGAATTTCACCACCAGCTGGAGAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCACACGGTTGCAAATaGCCTGAGGGTCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSHGCK*PEGRRA
Trigger: AGCCCTGCGACCCTCAGGTCATTTGCAACCGTGTGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCACCACTCCTCCACCTaGGACTCCATGGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALHHSST*DSMDCN
Trigger: GTTACAGTCCATGGAGTCTCAGGTGGAGGAGTGGTG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCACCACTCCTCCACCTaGGACTCCATGGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCHHSST*DSMDCN
Trigger: GTTACAGTCCATGGAGTCTCAGGTGGAGGAGTGGTG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTGTCCTCACTCATCATaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFCPHSS*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCTCATGATGAGTGAGGACA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCATCCACCTGGCGGCTaGGCTGGTAGAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNHPPGG*AGRAST
Trigger: AGTACTGGCTCTACCAGCTCAGCCGCCAGGTGGATG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSSICP*SSRASL
Trigger: CAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAAGCACCTCCACCGATaGCACATCCCTGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCKHLHR*HIPGFV
Trigger: GACAAACCCAGGGATGTGTCATCGGTGGAGGTGCTT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCTGCCTCTTTCTCCTaGAGTTGCTCCACAATATCA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPASFS*SCSTIS
Trigger: TGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGCTTTGTGCAGGCTaGGCAGTGGTTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWLCAG*AVVPHH
Trigger: ATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTGGCTTTGTGCAGGCTaGGCAGTGGTTCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFWLCAG*AVVPHH
Trigger: ATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCCTCAATGGCTTCGTaGTTCTTCATGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALASMAS*FFMAAS
Trigger: GGAGGCAGCCATGAAGAAGCACGAAGCCATTGAGGC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGTAGGCTGCAATGTCTaGCTCAATGGCTTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLVGCNV*LNGFVL
Trigger: AAGCACGAAGCCATTGAGGCAGACATTGCAGCCTAC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGGAGCCATCTCTTGTaGAGCTTGTGGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRSHLL*SLWLSS
Trigger: GGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGCTCCGGTTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAACCGGAGCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTTGCGCACAGAGGCTaGCAGCTCCGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLAHRG*QLRFLL
Trigger: CAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSSAQH*RISPNF
Trigger: GAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCAGCCTGCAAGCCAGTaGCTCGCTCTGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNQPASQ*LALSAW
Trigger: CCATGCAGACAGAGCGAGGCACTGGCTTGCAGGCTG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTTCTTTTTGATGTGCTaGTGGACAGCCTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRFFLMC*WTACKP
Trigger: TGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGTTCCAGTTGTAAATaGTTCTTGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGCSSCK*FLSSCR
Trigger: CCTGCAGCTGCTCAAGAAGCATTTACAACTGGAACA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGTCGGCGGCTGATTTaGTCACTGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSCRRLI*SLSGCP
Trigger: GGGACACCCAGACAGTGAGCAAATCAGCCGCCGACA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAGCCATGGTGGCCGCTaGTGTGTGACCACACTCAAT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSHGGR*CVTTLN
Trigger: ATTGAGTGTGGTCACACAGCAGCGGCCACCATGGCT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCGCTGAAGAACTTATaGAGCTCCCGAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSLKNL*SSREAA
Trigger: CGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCGCTGAAGAACTTATaGAGCTCCCGAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSLKNL*SSREAA
Trigger: CGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGGACACGAGGAGCTaGAGGTCGTGCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWDTRS*RSCSKA
Trigger: AGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGTCGCCGGATAAGCTaGTCCACCTCATCCACACTG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALCRRIS*STSSTL
Trigger: CAGTGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCKGVGG*LLCSAL
Trigger: CAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGGAGCAAGAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALGARTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTCTTGCTCC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCCTCACGCTTGGGGTTaGCCTCATCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCPHAWG*PHLWMM
Trigger: CATCATCCACAGATGAGGGCAACCCCAAGCGTGAGG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTTGTTGGAGACTGCTaGGCCCTCCATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVVGDC*ALHVVH
Trigger: GTGGACAACATGGAGGGCCCAGCAGTCTCCAACAAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGGTCCACAGTGCGATaGATCCAGGCCAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRSTVR*IQANSS
Trigger: GGAGCTGTTGGCCTGGATCCATCGCACTGTGGACCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAATCGGGCACACGCATaGCCAGCAGCCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSNRAHA*PAATAL
Trigger: AAGAGCAGTGGCTGCTGGCCATGCGTGTGCCCGATT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCCTGCATCAGTTGCTaGCCCTCCCTTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSCISC*PSLSIF
Trigger: GAAGATAGAAAGGGAGGGCCAGCAACTGATGCAGGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNKLCTS*SALLAS
Trigger: CGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGTAACTTCTTGAGCTaGCTGTTGACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCNFLS*LLTVAR
Trigger: CCTGGCCACTGTCAACAGCCAGCTCAAGAAGTTACA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLFLMCC*TACKPV
Trigger: CACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCGGTTCCTGTCTCACTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGRFLSH*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGTGAGACAGGAACCG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCCACTCAGCCATGGTaGCCGCTGCTGTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSTQPW*PLLCDH
Trigger: GTGGTCACACAGCAGCGGCCACCATGGCTGAGTGGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGGCCGCCAGCTCTGTaGGGTCCCCAAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNWPPAL*GPQRTC
Trigger: GCAAGTTCTTTGGGGACCCCACAGAGCTGGCGGCCA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGCTCTCCCAGCGAGCTaGAGGGTTGTTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSALPAS*RVVVVG
Trigger: TCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTCTCCAGCTGGTGGTaGAATTCTGGATGTTTACCT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLSSWW*NSGCLP
Trigger: AGGTAAACATCCAGAATTTCACCACCAGCTGGAGAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCTTCTCCTGAAACTTaGCGGGCTTCTCCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPSPET*RASPAY
Trigger: GTACGCTGGAGAAGCCCGTCAAGTTTCAGGAGAAGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCTTCTCCTGAAACTTaGCGGGCTTCTCCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPSPET*RASPAY
Trigger: GTACGCTGGAGAAGCCCGTCAAGTTTCAGGAGAAGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGTTCCACCTGCTGTTaGGATGGTCCTGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGSTCC*DGPDRS
Trigger: GCTCCTGTCAGGACCATCTCAACAGCAGGTGGAACC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGGCTCTCTGCAGCTTaGACCGCCACCTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRLSAA*TATCIF
Trigger: AAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGCCACTCCTTATTCTaGGCCAGCTCAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSHSLF*ASSAMN
Trigger: GTTCATGGCTGAGCTGGCTCAGAATAAGGAGTGGCT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGGCCCTGGTTCTTTTTaGTGTGCTGCTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFGPGSF*CAAGQP
Trigger: AGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAAGCACCTCCACCGATaGCACATCCCTGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSKHLHR*HIPGFV
Trigger: GACAAACCCAGGGATGTGTCATCGGTGGAGGTGCTT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALPWRFC*VIETAP
Trigger: TGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCTGCCTCTTTCTCCTaGAGTTGCTCCACAATATCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLPASFS*SCSTIS
Trigger: TGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACCTGCCTCTTTCTCCTaGAGTTGCTCCACAATATCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPPASFS*SCSTIS
Trigger: TGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTTGTTGTTGGAGACTaGTGGGCCCTCCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVVVGD*WALHVV
Trigger: GACAACATGGAGGGCCCAGCAGTCTCCAACAACAAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCCTCAATGGCTTCGTaGTTCTTCATGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFASMAS*FFMAAS
Trigger: GGAGGCAGCCATGAAGAAGCACGAAGCCATTGAGGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCCTGGAAGACCTTCTaGAGGGCCAGATTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSWKTF*RARFCS
Trigger: TGAGCAGAATCTGGCCCTGCAGAAGGTCTTCCAGGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCCGACAGACAGCCATaGACGTGGTTCACACGGTTG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSDRQP*TWFTRL
Trigger: CAACCGTGTGAACCACGTGCATGGCTGTCTGTCGGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCTCTAAGAAAGTGCTaGAGCACAAGCTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSLRKC*STSWSS
Trigger: ACTGGACCAGCTTGTGCTGCAGCACTTTCTTAGAGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGAGCCATCTCTTGTaGAGCTTGTGGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRSHLL*SLWLSS
Trigger: GGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGCTCCGGTTTCTCCTaGATCAGTTGCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSSGFS*ISCWPS
Trigger: GGAGGGCCAGCAACTGATGCAGGAGAAACCGGAGCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSSAQH*RISPNF
Trigger: GAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSSAQH*RISPNF
Trigger: GAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTTCTTTTTGATGTGCTaGTGGACAGCCTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPFFLMC*WTACKP
Trigger: TGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATTCTTTTTGATGTGCTaGTGGACAGCCTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPFFLMC*WTACKP
Trigger: TGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPWFFLM*CWTACK
Trigger: CTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLWFFLM*CWTACK
Trigger: CTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGCTCTGTTCATCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPCSVHP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGATGAACAGAGCA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGCTCTGTTCATCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCSVHP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGATGAACAGAGCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGCTCTGTTCATCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLCSVHP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGATGAACAGAGCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGTTCCAGTTGTAAATaGTTCTTGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRCSSCK*FLSSCR
Trigger: CCTGCAGCTGCTCAAGAAGCATTTACAACTGGAACA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGTCGGCGGCTGATTTaGTCACTGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNCRRLI*SLSGCP
Trigger: GGGACACCCAGACAGTGAGCAAATCAGCCGCCGACA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTGTCGCCGGATAAGCTaGTCCACCTCATCCACACTG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFCRRIS*STSSTL
Trigger: CAGTGTGGATGAGGTGGAGCAGCTTATCCGGCGACA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTGCTTACTCTGTTCTaGCTTGAGTTTCTCGATCGT +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLLTLF*LEFLDR
Trigger: ACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGGAGCAAGAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFGARTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTCTTGCTCC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGTTGTTGGAGACTGCTaGGCCCTCCATGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFVVGDC*ALHVVH
Trigger: GTGGACAACATGGAGGGCCCAGCAGTCTCCAACAAC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTTCGTGCTTCTTCATaGCTGCCTCCACTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLRASS*LPPLPA
Trigger: TGCCGGCAGTGGAGGCAGCCATGAAGAAGCACGAAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAGGCTGTTCATTTCCTaGTCAAGACTTTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILRLFIS*SRLSNR
Trigger: TCGATTTGAAAGTCTTGACCAGGAAATGAACAGCCT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGCTGCAGCACAAGCTaGTCCAGTAGTTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCCSTS*SSSFCI
Trigger: GATGCAAAAACTACTGGACCAGCTTGTGCTGCAGCA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCAGCCATGAACGCCTaGTGCCGGAGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSAMNA*CRSHLL
Trigger: CAAGAGATGGCTCCGGCACCAGGCGTTCATGGCTGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGTCTGCATGGCCAGTaGCAGCCGCTCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNCLHGQ*QPLLNP
Trigger: TGGGTTCAAGAGCGGCTGCCACTGGCCATGCAGACA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCCCGCCGCAGGCCCTaGTTCTTTTTGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSRRRP*FFLMCC
Trigger: GCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCCCCAGTAAGGGGGTaGGTGGCTGCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNAPVRG*VAAYSV
Trigger: AACAGAGTAAGCAGCCACCCACCCCCTTACTGGGGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCTCATCTTTAGCCTaGAGCAAGAACTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSSSLA*SKNSLP
Trigger: TGGCAGTGAGTTCTTGCTCCAGGCTAAAGATGAGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCAATCTTGATGACTTaGATCTGGAAGCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSILMT*IWKRRM
Trigger: CATCCTGCGCTTCCAGATTCAAGTCATCAAGATTGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPWRFC*VIETAP
Trigger: TGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGTTCCAACTTCTCCTaGCGGATGAGCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSSNFS*RMSSAL
Trigger: CAGAGCTGAGCTCATCCGGCAGGAGAAGTTGGAACT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGTAGGCTGCAATGTCTaGCTCAATGGCTTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCVGCNV*LNGFVL
Trigger: AAGCACGAAGCCATTGAGGCAGACATTGCAGCCTAC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCCTGGAAGACCTTCTaGAGGGCCAGATTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSWKTF*RARFCS
Trigger: TGAGCAGAATCTGGCCCTGCAGAAGGTCTTCCAGGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTTCTCCTGCATCAGTTaGTGGCCCTCCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALFSCIS*WPSLSI
Trigger: GATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSSAQH*RISPNF
Trigger: GAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTGTTCCAGTTGTAAATaGTTCTTGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPCSSCK*FLSSCR
Trigger: CCTGCAGCTGCTCAAGAAGCATTTACAACTGGAACA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGCCATGGTGGCCGCTaGTGTGTGACCACACTCAAT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSHGGR*CVTTLN
Trigger: ATTGAGTGTGGTCACACAGCAGCGGCCACCATGGCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNKGVGG*LLCSAL
Trigger: CAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGAGCAAGAACTCACTaGCATCCTGGGTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGARTH*HPGSGA
Trigger: AGCTCCAGACCCAGGATGGCAGTGAGTTCTTGCTCC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCTCACGCTTGGGGTTaGCCTCATCTGTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPHAWG*PHLWMM
Trigger: CATCATCCACAGATGAGGGCAACCCCAAGCGTGAGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAAGGGTTGTTGTTGTTaGAGACTGCTGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFKGCCC*RLLGPP
Trigger: TGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCGGCTGTTTTCATCTaGCACCACAAGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPAVFI*HHKSRA
Trigger: CGCTCTGCTCTTGTGGTGCCAGATGAAAACAGCCGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAATGGACTTCTCATCTaGAGCCTCCATGTTCACATC +
Preference number: 4 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPNGLLI*SLHVHI
Trigger: GATGTGAACATGGAGGCTCCAGATGAGAAGTCCATT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACGGTTCCTGTCTCACTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPRFLSH*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGTGAGACAGGAACCG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACTGATGCTGGGCCTTTaGAGTCCTTGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSLMLGL*SPCRSP
Trigger: TGGGCTTCTACAAGGACTCCAAAGGCCCAGCATCAG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCTGCCATCCTGGGTCTaGAGCTTGAAGACATGCTTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFLPSWV*SLKTCF
Trigger: GAAGCATGTCTTCAAGCTCCAGACCCAGGATGGCAG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCATCTGCTAAAGCCTTaGTCCGAGAGCACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCHLLKP*SESTQR
Trigger: TCTTTGAGTGCTCTCGGATCAAGGCTTTAGCAGATG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGTTTGCTTTGGATGCTaGAGAGTAGCACCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFVCFGC*RVAPPG
Trigger: ACCTGGAGGTGCTACTCTTCAGCATCCAAAGCAAAC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGCCACTCCTTATTCTaGGCCAGCTCAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSHSLF*ASSAMN
Trigger: GTTCATGGCTGAGCTGGCTCAGAATAAGGAGTGGCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGCCACCTGCATCTTTTaGTGGTTCAGCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNATCIF*WFSSIV
Trigger: CACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALWFFLM*CWTACK
Trigger: CTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCWFFLM*CWTACK
Trigger: CTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGGCTGTTCATTTCCTaGTCAAGACTTTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRLFIS*SRLSNR
Trigger: TCGATTTGAAAGTCTTGACCAGGAAATGAACAGCCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCACCTGCATCTTTTGCTaGTTCAGCTCCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFTCIFC*FSSIVV
Trigger: CACCACGATGGAGCTGAACCAGCAAAAGATGCAGGT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCCTGCATCAGTTGCTaGCCCTCCCTTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSCISC*PSLSIF
Trigger: GAAGATAGAAAGGGAGGGCCAGCAACTGATGCAGGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGTAACTTCTTGAGCTaGCTGTTGACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSCNFLS*LLTVAR
Trigger: CCTGGCCACTGTCAACAGCCAGCTCAAGAAGTTACA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTGTAACTTCTTGAGCTaGCTGTTGACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFCNFLS*LLTVAR
Trigger: CCTGGCCACTGTCAACAGCCAGCTCAAGAAGTTACA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSFLMCC*TACKPV
Trigger: CACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCTCATCTTTAGCCTaGAGCAAGAACTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSSSLA*SKNSLP
Trigger: TGGCAGTGAGTTCTTGCTCCAGGCTAAAGATGAGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCATCTGCTAAAGCCTTaGTCCGAGAGCACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFHLLKP*SESTQR
Trigger: TCTTTGAGTGCTCTCGGATCAAGGCTTTAGCAGATG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCTCATAGCGTTCTATaGTCTTGTCCACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPHSVL*SCPPPT
Trigger: TGTTGGAGGTGGACAAGATCATAGAACGCTATGAGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCTGCCTCTTTCTCCTaGAGTTGCTCCACAATATCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPASFS*SCSTIS
Trigger: TGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCTCTCTAAGAAAGTGCTaGAGCACAAGCTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSLRKC*STSWSS
Trigger: ACTGGACCAGCTTGTGCTGCAGCACTTTCTTAGAGA...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTTCTCCTGCATCAGTTaGTGGCCCTCCCTTTCTATC +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNFSCIS*WPSLSI
Trigger: GATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSWFFLM*CWTACK
Trigger: CTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGCTCTGTTCATCCTTaGCCTTGTCCTCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSCSVHP*PCPHSS
Trigger: TGATGAGTGAGGACAAGGGCAAGGATGAACAGAGCA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTGCTTACTCTGTTCTaGCTTGAGTTTCTCGATCGT +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLLTLF*LEFLDR
Trigger: ACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCAATGTCTGCCTCAATaGCTTCGTGCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFQCLPQ*LRASSW
Trigger: CCATGAAGAAGCACGAAGCCATTGAGGCAGACATTG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFISIFS*IQPSSS
Trigger: TGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAATCAGCATCTTCTCATaGATCCAGCCATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSISIFS*IQPSSS
Trigger: TGAGCTGGATGGCTGGATCCATGAGAAGATGCTGAT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCCGGTTCCTGTCTCACTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRFLSH*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGTGAGACAGGAACCG...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCCTCATCTTTAGCCTaGAGCAAGAACTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSSSLA*SKNSLP
Trigger: TGGCAGTGAGTTCTTGCTCCAGGCTAAAGATGAGGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCCTCATAGCGTTCTATaGTCTTGTCCACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNPHSVL*SCPPPT
Trigger: TGTTGGAGGTGGACAAGATCATAGAACGCTATGAGG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR TCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTTGTGGTCAAATCTTTaGGCCAAGAGTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLWSNL*AKSSNF
Trigger: GAAGTTGGAACTCTTGGCTCAAAGATTTGACCACAA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTTCTTTTTGATGTGCTaGTGGACAGCCTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNFFLMC*WTACKP
Trigger: TGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATGTTCCAGTTGTAAATaGTTCTTGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSCSSCK*FLSSCR
Trigger: CCTGCAGCTGCTCAAGAAGCATTTACAACTGGAACA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACTGCTTACTCTGTTCTaGCTTGAGTTTCTCGATCGT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSLLTLF*LEFLDR
Trigger: ACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACGGTTCCTGTCTCACTaGCAAACTCTGAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSRFLSH*QTLRIS
Trigger: AGAAATTCTCAGAGTTTGCCAGTGAGACAGGAACCG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCCTCATCTTTAGCCTaGAGCAAGAACTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSSSLA*SKNSLP
Trigger: TGGCAGTGAGTTCTTGCTCCAGGCTAAAGATGAGGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTGTTCCAGTTGTAAATaGTTCTTGAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNCSSCK*FLSSCR
Trigger: CCTGCAGCTGCTCAAGAAGCATTTACAACTGGAACA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR GCA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTGCTTACTCTGTTCTaGCTTGAGTTTCTCGATCGT +
Preference number: 4 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLLTLF*LEFLDR
Trigger: ACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGAGTTAGCAAACTTTTaGTTGCTAATGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SAVIPALADEKLSLCPQCELANF*LLMRST
Trigger: TGTGGACCTCATTAGCAACCAAAAGTTTGCTAACTC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CCA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGAGTTAGCAAACTTTTaGTTGCTAATGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALELANF*LLMRST
Trigger: TGTGGACCTCATTAGCAACCAAAAGTTTGCTAACTC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CAGCGGCGCCGAGCGCTAGCCGCGCGCTCCGCCAGGCCAGCCAAATaGAAAGGCTCGGCGCCCGGGCCCACGGAGCCGCCCGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: QRRRALAARSARPAK*KGSAPGPTEPPAAA
Trigger: GGCTGCGGCGGGCGGCTCCGTGGGCCCGGGCGCCGAGCCTTTGCATTTGGCTGGCCTGGCGGAGCGCGCGGCTAGCGCTCGGCGCCGCTG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp ACCCTCTCGAGGCCGTGGCCGCCGGCGCGGCTTGGGCCGGTCCCGTaGCCGCGGCCGATCGGGCCGAGGTGTCCGCTCGGGCGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TLSRPWPPARLGPVP*PRPIGPRCPLGRLK
Trigger: CTTGAGCCGCCCGAGCGGACACCTCGGCCCGATCGGCCGCGGGCACGGGACCGGCCCAAGCCGCGCCGGCGGCCACGGCCTCGAGAGGGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp TGGACAGGTCGTGCGCGCCGCCCGCCGTGCCCGCCGCGCCACCACTaGCGCTCGTGGCCTCTAGGAGGCGCTCCTTGTCCCGCGCCCAAC +
Preference number: 5 (lower is better)
Translates to: WTGRARRPPCPPRHH*RSWPLGGAPCPAPN
Trigger: GTTGGGCGCGGGACAAGGAGCGCCTCCTAGAGGCCACGAGCGGCAGTGGTGGCGCGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CCGGCCAGTGCGCCCCACTCGGCTCCTAGCTCCTCGGCGCCCTGGTaGAGGCGCGTCGCCTGTGCGGGGAAGCGTTCGGCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PASAPHSAPSSSAPW*RRVACAGKRSASSA
Trigger: GGCGCTGCTGGCCGAACGCTTCCCCGCACAGGCGACGCGCCTGCACCAGGGCGCCGAGGAGCTAGGAGCCGAGTGGGGCGCACTGGCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CCAGCTCGCCCTGCAGGATCTTATGCTGCGCCAGCAGGCGAGCGGTaGTGGACAGGTCGTGCGCGCCGCCCGCCGTGCCCGCCGCGCCAC +
Preference number: 5 (lower is better)
Translates to: PARPAGSYAAPAGER*WTGRARRPPCPPRH
Trigger: GTGGCGCGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp AGCAGCGCCCGCCGGCCGCCCAGCTCGCCCTGCAGGATCTTATGCTaGGCCAGCAGGCGAGCGGTGCTGGACAGGTCGTGCGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SSARRPPSSPCRILC*ASRRAVLDRSCAPP
Trigger: GGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGGCCGGCGGGCGCTGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GCTCGCCCTGCAGGATCTTATGCTGCGCCAGCAGGCGAGCGGTGCTaGACAGGTCGTGCGCGCCGCCCGCCGTGCCCGCCGCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: ARPAGSYAAPAGERC*TGRARRPPCPPRHH
Trigger: GTGGTGGCGCGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GCTCGCGCTTGCGCAGCAGGAAGCCCTCGTGCTGCACTGTGTGAGTaGGCGGAGGTGGCGGCGCGGGGGCGGAGCCTCCCTGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ARACAAGSPRAALCE*AEVAARGRSLPGQG
Trigger: CCCCTGCCCAGGGAGGCTCCGCCCCCGCGCCGCCACCTCCGCCCACTCACACAGTGCAGCACGAGGGCTTCCTGCTGCGCAAGCGCGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp AGGATCTTATGCTGCGCCAGCAGGCGAGCGGTGCTGGACAGGTCGTaGGCGCCGCCCGCCGTGCCCGCCGCGCCACCACTGCCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: RILCCASRRAVLDRS*APPAVPAAPPLPLV
Trigger: CACGAGCGGCAGTGGTGGCGCGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp TGCAGCAGCGCCCGCCGGCCGCCCAGCTCGCCCTGCAGGATCTTATaGTGCGCCAGCAGGCGAGCGGTGCTGGACAGGTCGTGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: CSSARRPPSSPCRIL*CASRRAVLDRSCAP
Trigger: CGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGGCCGGCGGGCGCTGCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp CCCGCCCGGGGCGCGCTCTCCACTGCCCGTCGCTTCTCGCGCACTTaGGCGCGCACCTCGGCCACCTCCAGCACGTGGTTCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PARGALSTARRFSRT*ARTSATSSTWFSTS
Trigger: GCTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAAGTGCGCGAGAAGCGACGGGCAGTGGAGAGCGCGCCCCGGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp AGCCGGGTCCGCCGGGCACCTACCAGCCCGGTCAGCAGGGCCCACTaGCGAAGGACACTGTCACGCTGGGCAGCCACCCGCCGGGCATCA +
Preference number: 5 (lower is better)
Translates to: SRVRRAPTSPVSRAH*RRTLSRWAATRRAS
Trigger: TGATGCCCGGCGGGTGGCTGCCCAGCGTGACAGTGTCCTTCGCCAGTGGGCCCTGCTGACCGGGCTGGTAGGTGCCCGGCGGACCCGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp CCACCACGCGCACCTGCAGAGCCACCACCAGCGGCCCTGCGCCACTaGCTCCTCCCAGTGTCGCCAGCTGGCGCCTCAGGCCACCCACAG +
Preference number: 5 (lower is better)
Translates to: PPRAPAEPPPAALRH*LLPVSPAGASGHPQ
Trigger: CTGTGGGTGGCCTGAGGCGCCAGCTGGCGACACTGGGAGGAGCCAGTGGCGCAGGGCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp TTCGGCTTCCACCACGCGCACCTGCAGAGCCACCACCAGCGGCCCTaGGCCACTGGCTCCTCCCAGTGTCGCCAGCTGGCGCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: FGFHHAHLQSHHQRP*ATGSSQCRQLAPQA
Trigger: GGCCTGAGGCGCCAGCTGGCGACACTGGGAGGAGCCAGTGGCGCAGGGCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTGGAAGCCGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CCAGGCGCTCGCCCACCGCACTCTGCCGCTCCCCCACCAACTCCTTaGTCGCCTGCTCCAGCGGAAGCGCCGCCGTCTGCGCCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: PGARPPHSAAPPPTP*SPAPAEAPPSAPEA
Trigger: AGCTTCAGGCGCAGACGGCGGCGCTTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGAGCGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp CGCTGCGGCTGTCGGGGCCGCGGGTTCTACCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: RCGCRGRGFYLPRGL*QPVNARLETLGLEL
Trigger: GAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAGGTAGAACCCGCGGCCCCGACAGCCGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp GCCAGCACGCCCGCGCGCTCCAGCACCTCCTCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: ASTPARSSTSSKRGP*AWISRRRPWFFLMC
Trigger: GCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGAGGAGGTGCTGGAGCGCGCGGGCGTGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp CTTGAGCTCCTGGCGCACATACCCAACCCGGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCTGCGGGCCAAAGGCTCCAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: LELLAHIPNPGPHLR*QRVRGPAGQRLQAP
Trigger: AGGGGCCTGGAGCCTTTGGCCCGCAGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp TCCAGGCTGCGAGGCAGCGGCCCCTCGACGGCGCCTGCTGCCTCCTaGGCCCGCACCAGCCAGTCCAGGAAAGTATCCAAATCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SRLRGSGPSTAPAAS*ARTSQSRKVSKSRR
Trigger: CCTGCGCGATTTGGATACTTTCCTGGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGCCGTCGAGGGGCCGCTGCCTCGCAGCCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CGCCTCCTCCAGGCTGCGAGGCAGCGGCCCCTCGACGGCGCCTGCTaGCTCCTGCGCCCGCACCAGCCAGTCCAGGAAAGTATCCAAATC +
Preference number: 5 (lower is better)
Translates to: RLLQAARQRPLDGAC*LLRPHQPVQESIQI
Trigger: GATTTGGATACTTTCCTGGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGCCGTCGAGGGGCCGCTGCCTCGCAGCCTGGAGGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp ATCCGCCTCCTCCAGGCTGCGAGGCAGCGGCCCCTCGACGGCGCCTaGTGCCTCCTGCGCCCGCACCAGCCAGTCCAGGAAAGTATCCAA +
Preference number: 5 (lower is better)
Translates to: IRLLQAARQRPLDGA*CLLRPHQPVQESIQ
Trigger: TTGGATACTTTCCTGGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGCCGTCGAGGGGCCGCTGCCTCGCAGCCTGGAGGAGGCGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CGCTCCTCCCACAAGCCGAGCAGTTTGTGCCAGCCAACCTCGAGGTaGGGCAGCCACTCGTCTAGCGCCAGACCGGGGCCCAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RSSHKPSSLCQPTSR*GSHSSSARPGPSSA
Trigger: CGCGGAGCTGGGCCCCGGTCTGGCGCTAGACGAGTGGCTGCCGCACCTCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTGGGAGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp TGCAAAGGCTCCAGCAGGCGCACCAGGCGCTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCCTTGCTCGCCTGCTCCAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: CKGSSRRTRRSPTAL*RSPTNSLLACSSGS
Trigger: GCTTCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGAGCGCCTGGTGCGCCTGCTGGAGCCTTTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GACCGGGGCCCAGCTCCGCGCCCTCGGACGCTAGCAGCGCTTCACTaGCAGCCACGATGCGCGCGTAGTCCTCCTCACGCTGATCCACCT +
Preference number: 5 (lower is better)
Translates to: DRGPAPRPRTLAALH*QPRCARSPPHADPP
Trigger: AGGTGGATCAGCGTGAGGAGGACTACGCGCGCATCGTGGCTGCCAGTGAAGCGCTGCTAGCGTCCGAGGGCGCGGAGCTGGGCCCCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTTGAGCTCCTaGCGCACATACCCAACCCGGGTCCGCACCTCCGCTGACAGCGTG +
Preference number: 5 (lower is better)
Translates to: GSRSMRGWRRSGLSS*RTYPTRVRTSADSV
Trigger: CACGCTGTCAGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GATCTTCGTCTCCGTGGCAGCTCCTCCGCACGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGGACCAACTCCGTCGCCGCCGGAGTC +
Preference number: 5 (lower is better)
Translates to: DLRLRGSSSARSANS*RSDRGRTNSVAAGV
Trigger: GACTCCGGCGGCGACGGAGTTGGTCCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCGTGCGGAGGAGCTGCCACGGAGACGAAGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp AGGTCTCTGGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACCCAACCCGGGTCCGCACCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: RSLAAGQCAAGDARA*APGAHTQPGSAPPL
Trigger: CAGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp GTCCAGGAAAGTATCCAAATCGCGCAGGAAACGCTGCAGGCGACCTaGCGCCGCAACCGCCTCGCCGCAGGCCTGAGCCGCTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: VQESIQIAQETLQAT*RRNRLAAGLSRSGQ
Trigger: CTGGCCGGAGCGGCTCAGGCCTGCGGCGAGGCGGTTGCGGCGGCAGGTCGCCTGCAGCGTTTCCTGCGCGATTTGGATACTTTCCTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GGTCGTGCTCAAAGGCTCGCAGGGTCCGCTGCATGGAGCTGGCACTaGGTCTGGGTTCAGGTGGTGCCGTCAGGCGGGGCAGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRAQRLAGSAAWSWH*VWVQVVPSGGAASS
Trigger: GGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GCTGCAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTGCATGGAGCTaGCACTGGGTCTGGGTTCAGGTGGTGCCGTCAGGCGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AAGRAQRLAGSAAWS*HWVWVQVVPSGGAA
Trigger: GGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCACCAGCTCCTGGCAGGTaGCCAGCTCAGGCACGCGCG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPPAPGR*PAQARA
Trigger: CGCGCGTGCCTGAGCTGGCAACCTGCCAGGAGCTGG...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGCGTCGAGCTCGCGCTaGCGCAGCAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPASSSR*RSRKPS
Trigger: CGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACGC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CGCCCACAGGCTCCGAGAAGCTTCCAGCTCTGCGCGCCGCCGTGCTaGCTGCTCCTGCAGCTCCGACAGACAGCCATGCACGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: RPQAPRSFQLCAPPC*LLLQLRQTAMHVVH
Trigger: GTGAACCACGTGCATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCGGAGCCTGTGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CAGCGCCCACAGGCTCCGAGAAGCTTCCAGCTCTGCGCGCCGCCGTaGTGCCTGCTCCTGCAGCTCCGACAGACAGCCATGCACGTGGTT +
Preference number: 5 (lower is better)
Translates to: QRPQAPRSFQLCAPP*CLLLQLRQTAMHVV
Trigger: AACCACGTGCATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCGGAGCCTGTGGGCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CAGGGTCCGCTGCATGGAGCTGGCACTGGGTCTGGGTTCAGGTGGTaGCGTCAGGCGGGGCAGCCTCCTCCGCTTCTCCTCAATCTGCCC +
Preference number: 5 (lower is better)
Translates to: QGPLHGAGTGSGFRW*RQAGQPPPLLLNLP
Trigger: GGGCAGATTGAGGAGAAGCGGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CGGGCCTGGCTGTGGAAGCGCAGGGCGTCGGCCGTGGAGCTGACGTaGAGACGAGCATCTTCACAGGCTGCTAGCAGCTCCTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RAWLWKRRASAVELT*RRASSQAASSSFQP
Trigger: GGGCTGGAAGGAGCTGCTAGCAGCCTGTGAAGATGCTCGTCTGCACGTCAGCTCCACGGCCGACGCCCTGCGCTTCCACAGCCAGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GCGAAGCTCTGCACTAGCTGGTCCGCCTTGCTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTGGTGCTCTCCAGCTCCGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AKLCTSWSALLASKS*RALACVVLSSSAQH
Trigger: GTGCTGGGCGGAGCTGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GCTCAAAGGCTCGCAGGGTCCGCTGCATGGAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCAGGCGGGGCAGCCTCCTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: AQRLAGSAAWSWHWV*VQVVPSGGAASSAS
Trigger: AGAAGCGGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp CGAGGAGCTGCAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGGGTTCAGGTGGTGCCGTCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: RGAAGRAQRLAGSAA*SWHWVWVQVVPSGG
Trigger: CCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCGTCGAGCTCGCGCTaGCGCAGCAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILASSSR*RSRKPS
Trigger: CGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CGCTCACTCTGGGCTGCGATGTCCCCCTCCAGCAGCCCGTGCTTCTaGAGCAGGTCATCGGCCTCCACCAGGTGCTGCCCACATTCCCGA +
Preference number: 5 (lower is better)
Translates to: RSLWAAMSPSSSPCF*SRSSASTRCCPHSR
Trigger: TCGGGAATGTGGGCAGCACCTGGTGGAGGCCGATGACCTGCTGCAGAAGCACGGGCTGCTGGAGGGGGACATCGCAGCCCAGAGTGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CACAGGCTCCGAGAAGCTTCCAGCTCTGCGCGCCGCCGTGCTGCCTaGTCCTGCAGCTCCGACAGACAGCCATGCACGTGGTTCACACGG +
Preference number: 5 (lower is better)
Translates to: HRLREASSSARRRAA*SCSSDRQPCTWFTR
Trigger: CCGTGTGAACCACGTGCATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCGGAGCCTGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp GCCGCTTGTCCAGCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTTaGTGGCCTCGAAGAGCTGGCGCGCCTTGGCCTGTGTGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: AACPAPRSSALAGPP*WPRRAGAPWPVWCS
Trigger: AGAGCACCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGGACAAGCGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp CGCTTCTCGCGCACTTGGGCGCGCACCTCGGCCACCTCCAGCACGTaGTTCTCCACCAGCAGCACCGCGCTCATCTCCTCTTTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: RFSRTWARTSATSST*FSTSSTALISSLRC
Trigger: ACAGCGCAAAGAGGAGATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAAGTGCGCGAGAAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp TCGCAGGGTCCGCTGCATGGAGCTGGCACTGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAGCCTCCTCCGCTTCTCCTCAATCTG +
Preference number: 5 (lower is better)
Translates to: SQGPLHGAGTGSGFR*CRQAGQPPPLLLNL
Trigger: CAGATTGAGGAGAAGCGGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GGTTCTACCTTCCCCGAGGTCTCTGGCAGCCGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGCTCCTGGCGCACATACCCAACCCGG +
Preference number: 5 (lower is better)
Translates to: GSTFPEVSGSRSMRG*RRSGLSSWRTYPTR
Trigger: CCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAGGTAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTGCTCTGCAGCTGCTCTaGGCCACGGCGCACCGCTTC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILALQLL*ATAHRF
Trigger: GAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAGC...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGGCGGCTCAAGCCCGTaGGGCAGGCGACCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRGGSSP*GRRPGG
Trigger: TCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATCCCCGCCCTCACGCTaGGGGTTGCCCTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSPPSR*GLPSSV
Trigger: CACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp AGAGCGCGGTGCTGGCGCGCCAGGCGACGGCTGGACGCTTCGTCGTaGCCAAAATCTCCAGCGGCTGCTAGACGATACGCGTCACGAAGC +
Preference number: 5 (lower is better)
Translates to: RARCWRARRRLDASS*PKSPAAARRYASRS
Trigger: GCTTCGTGACGCGTATCGTCTAGCAGCCGCTGGAGATTTTGGTCACGACGAAGCGTCCAGCCGTCGCCTGGCGCGCCAGCACCGCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp GACACGAGGAGCTGCAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGTCTGGGTTCAGGTGGTGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: DTRSCRSCSKARRVR*MELALGLGSGGAVR
Trigger: CCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCTCGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CCTTCCTGCAGCTGCCGTACCTGGGACACGAGGAGCTGCAGGTCGTaGTCAAAGGCTCGCAGGGTCCGCTGCATGGAGCTGGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: PSCSCRTWDTRSCRS*SKARRVRCMELALG
Trigger: ACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp TGCAGACGAGCATCTTCACAGGCTGCTAGCAGCTCCTTCCAGCCCTaGAACACCTCCTGCTCGCGGCTGGCGATGGCCTCGGCGTGCTCG +
Preference number: 5 (lower is better)
Translates to: CRRASSQAASSSFQP*NTSCSRLAMASACS
Trigger: CGAGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGGTGTTGCAGGGCTGGAAGGAGCTGCTAGCAGCCTGTGAAGATGCTCGTCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp GCTTGTCCAGCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTTGCTaGCCTCGAAGAGCTGGCGCGCCTTGGCCTGTGTGGTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ACPAPRSSALAGPPC*PRRAGAPWPVWCSP
Trigger: TGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGGACAAGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAAGAGCAGAGCGTCCTaGGCGGAGCGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPKSRAS*AERVSL
Trigger: CAGAGAGACCCGCTCCGCCAAGGACGCTCTGCTCTT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATTGATAGACGTGCGCTaGGACCAGCGCCTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPLIDVR*DQRLPA
Trigger: CGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAAGAGCTGGCGCGCCTaGGCCTGTGTGGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILKSWRA*ACVVLS
Trigger: GGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCTCTGCAGCTGCTCTaGGCCACGGCGCACCGCTTC +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGALQLL*ATAHRF
Trigger: GAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCGTCGAGCTCGCGCTaGCGCAGCAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRASSSR*RSRKPS
Trigger: CGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CTCCGAGAAGCTTCCAGCTCTGCGCGCCGCCGTGCTGCCTGCTCCTaGAGCTCCGACAGACAGCCATGCACGTGGTTCACACGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: LREASSSARRRAACS*SSDRQPCTWFTRLQ
Trigger: TTGCAACCGTGTGAACCACGTGCATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CTTTCTCCCCGATCCACAACTCGCAGGCATGTACCTCGCCGAACATaGGGTACACGGCGAGCGCGTCCCGAAGCCACTGTCGTCGCAGCG +
Preference number: 5 (lower is better)
Translates to: LSPRSTTRRHVPRRT*GTRRARPEATVVAA
Trigger: CGCTGCGACGACAGTGGCTTCGGGACGCGCTCGCCGTGTACCGCATGTTCGGCGAGGTACATGCCTGCGAGTTGTGGATCGGGGAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GACTCCACTGTGCAAGGGAGTTCAGCGCCAGACAGCGCCACCTCCTaGTTGCGCAGCACCGCAAGCGCCTGGCACAGGTCTCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DSTVQGSSAPDSATS*LRSTASAWHRSLRK
Trigger: CTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTTGCACAGTGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTCGCTTCTCGCGCACTaGGGCGCGCACCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSLLAH*GAHLGH
Trigger: GTGGCCGAGGTGCGCGCCCAAGTGCGCGAGAAGCGA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTTGATAGACGTGCGCTaGGACCAGCGCCTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLIDVR*DQRLPA
Trigger: CGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAGCGCCACCTCCTGGTaGCGCAGCACCGCAAGCGCC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSATSW*RSTASA
Trigger: GGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGCGCCACCTCCTGGTaGCGCAGCACCGCAAGCGCC +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSATSW*RSTASA
Trigger: GGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGACACATCCCTGGGTTaGTCAGCTGCCCCGATCTGG +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPDTSLG*SAAPIW
Trigger: CCAGATCGGGGCAGCTGACAAACCCAGGGATGTGTC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGCAAAGGCGCTGCCTaGGCCGCCAGCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSKGAA*AASSVG
Trigger: CCCCACAGAGCTGGCGGCCAAGGCAGCGCCTTTGCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGCGTCGAGCTCGCGCTaGCGCAGCAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLASSSR*RSRKPS
Trigger: CGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACGC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp GCCGTCAGGCGGGGCAGCCTCCTCCGCTTCTCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTGAAGAACTTATGCAGCTCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: AVRRGSLLRFSSICP*SSRASLKNLCSSRE
Trigger: CTCTCGGGAGCTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGAAGCGGAGGAGGCTGCCCCGCCTGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CCACTGTGCAAGGGAGTTCAGCGCCAGACAGCGCCACCTCCTGGTTaGGCAGCACCGCAAGCGCCTGGCACAGGTCTCTCAGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: PLCKGVQRQTAPPPG*AAPQAPGTGLSGRV
Trigger: AACTCTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTTGCACAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp CAGTTCATCGTCCAGGTCGTGGGCCACCTGATGCAGCTCCTTGGATaGCAGCAACAAGCGGCGTCGCTCCTGCAAAGGCTCCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: QFIVQVVGHLMQLLG*QQQAASLLQRLQQA
Trigger: CGCCTGCTGGAGCCTTTGCAGGAGCGACGCCGCTTGTTGCTGGCATCCAAGGAGCTGCATCAGGTGGCCCACGACCTGGACGATGAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CTCGCGAGGCTGAGGCAGCGACGGCCCAGCAGGGATCCCTGGGCCTaGCTCTTTCTCCTGAAGTTGCTCCACAATATCAGCCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LARLRQRRPSRDPWA*LFLLKLLHNISQSG
Trigger: GCCACTCTGGCTGATATTGTGGAGCAACTTCAGGAGAAAGAGGCAGGCCCAGGGATCCCTGCTGGGCCGTCGCTGCCTCAGCCTCGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGCTGGGCCCTCCATGTaGTCCACCTCCCCTGGTACT +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGAGPSM*STSPGT
Trigger: AGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAGAAGGGTTGTTGTTGTaGGAGACTGCTGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPEGLLL*ETAGPS
Trigger: GGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTC...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTCCCCCACCAACTCCTaGCTCGCCTGCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRSPTNS*LACSSG
Trigger: TCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGGA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCTCTGCAGCTGCTCTaGGCCACGGCGCACCGCTTC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPALQLL*ATAHRF
Trigger: GAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCT +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLLNLP*KLPGIA
Trigger: AGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGGCGGCTCAAGCCCGTaGGGCAGGCGACCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALGGSSP*GRRPGG
Trigger: TCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGGCGGCTCAAGCCCGTaGGGCAGGCGACCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCGGSSP*GRRPGG
Trigger: TCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCTCACCCATGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCATGGGTGAG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAAGCCCAGCTCCCCCTaGCTGAGCACACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILKPSSP*LSTQYR
Trigger: CCTGTACTGTGTGCTCAGCAAGGGGGAGCTGGGCTT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp GGGAGGTTCCCGATCCCAGCCCCGATCTGGGCTCTCCCAGCGAGCTaGAGGGTTGTTGTTGTTGGAGACTGCTGGGCCCTCCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: GRFPIPAPIWALPAS*RVVVVGDCWALHVV
Trigger: GACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCTGGGATCGGGAACCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS TCA 90 bp TGGGCCTCGGCAGCTGCTCCCCCGACAGCACTTCCAGAAGCCGGGTaGGGACAAACCCGTCCCGAAGGTCTGCATACAGGTCTCCAATGT +
Preference number: 5 (lower is better)
Translates to: WASAAAPPTALPEAG*GQTRPEGLHTGLQC
Trigger: ACATTGGAGACCTGTATGCAGACCTTCGGGACGGGTTTGTCCTCACCCGGCTTCTGGAAGTGCTGTCGGGGGAGCAGCTGCCGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS TCA 90 bp AGGGCTGATAGCCCTGTAGCTGGGAGAATCTCAGGGCTGCAGCATTaGGGGCCTCCACTCGCTCACTCTGGGCTGCGATGTCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: RADSPVAGRISGLQH*GPPLAHSGLRCPPP
Trigger: TGGAGGGGGACATCGCAGCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGAGATTCTCCCAGCTACAGGGCTATCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000011895.14
CDS TCA 90 bp TCCTCCGCTTCTCCTCAATCTGCCCTTGAAGCTCCCGGGCATCGCTaGAGAACTTATGCAGCTCCCGAGAGGCAGCGAGCAGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSASPQSALEAPGHR*RTYAAPERQRAAGP
Trigger: GGGCCCAGCTGCTCGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGAAGCGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CTGCGCCTGCTCCCCGTAGGCGTTGCCTTGCCGCAGCAGGCTCTCTaGAGCTTGAACCGCCACCTGCATCTTTTGCTGGTTCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRLLPVGVALPQQAL*SLNRHLHLLLVQLH
Trigger: ATGGAGCTGAACCAGCAAAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAGCAGGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGCTGGGCCCTCCATGTaGTCCACCTCCCCTGGTACT +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRAGPSM*STSPGT
Trigger: AGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAGCTCACCCCACGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCGTGGGGTGAGCT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCGCTTCTCGCGCACTaGGGCGCGCACCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSLLAH*GAHLGH
Trigger: GTGGCCGAGGTGCGCGCCCAAGTGCGCGAGAAGCGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCACAAGCCGAGCAGTTaGTGCCAGCCAACCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGHKPSS*CQPTSR
Trigger: CCTCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCAGGCTCTCTGCAGCTaGAACCGCCACCTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILQALCS*NRHLHL
Trigger: AAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAAGAGCTGGCGCGCCTaGGCCTGTGTGGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLKSWRA*ACVVLS
Trigger: GGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAAGAGCTGGCGCGCCTaGGCCTGTGTGGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPKSWRA*ACVVLS
Trigger: GGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCCCCCACCAACTCCTaGCTCGCCTGCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSPTNS*LACSSG
Trigger: TCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTCAGTGGCAGCCGCTCTaGAACCCAAGCCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILQWQPL*NPSQFI
Trigger: GATGAACTGGCTTGGGTTCAAGAGCGGCTGCCACTG...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCT +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGLLNLP*KLPGIA
Trigger: AGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGACACATCCCTGGGTTaGTCAGCTGCCCCGATCTGG +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGDTSLG*SAAPIW
Trigger: CCAGATCGGGGCAGCTGACAAACCCAGGGATGTGTC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGGCGGCTCAAGCCCGTaGGGCAGGCGACCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFGGSSP*GRRPGG
Trigger: TCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCCCGCCCTCACGCTaGGGGTTGCCCTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSPPSR*GLPSSV
Trigger: CACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCTCCCCGCCCTCACGCTaGGGGTTGCCCTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPSPPSR*GLPSSV
Trigger: CACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGA...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp CTCTCAGGAAGAGTTGATAGACGTGCGCTTGGACCAGCGCCTCCCTaGGCTCCTCCCACAAGCCGAGCAGTTTGTGCCAGCCAACCTCGA +
Preference number: 5 (lower is better)
Translates to: LSGRVDRRALGPAPP*APPTSRAVCASQPR
Trigger: TCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTGGGAGGAGCGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAACTCTTCCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp GTTGCAAATGACCTGAGGGTCGCAGGGCTGGGAGAATCTCAGGGCTaGAGCATTGAGGGCCTCCACTCGCTCACTCTGGGCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: VANDLRVAGLGESQG*SIEGLHSLTLGCDV
Trigger: GACATCGCAGCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGAGATTCTCCCAGCCCTGCGACCCTCAGGTCATTTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS CCA 90 bp AAGCCAGTTCATCGTCCAGGTCGTGGGCCACCTGATGCAGCTCCTTaGATGCCAGCAACAAGCGGCGTCGCTCCTGCAAAGGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KPVHRPGRGPPDAAP*MPATSGVAPAKAPA
Trigger: TGCTGGAGCCTTTGCAGGAGCGACGCCGCTTGTTGCTGGCATCCAAGGAGCTGCATCAGGTGGCCCACGACCTGGACGATGAACTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAAGAGCAGAGCGTCCTaGGCGGAGCGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPKSRAS*AERVSL
Trigger: CAGAGAGACCCGCTCCGCCAAGGACGCTCTGCTCTT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGACAAAGAGGCGCCGGTaGTGGGCGCGCAGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRTKRRR*WARSLL
Trigger: AAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCACAAGCCGAGCAGTTaGTGCCAGCCAACCTCGAGG +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRHKPSS*CQPTSR
Trigger: CCTCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCTCTGCAGCTGCTCTaGGCCACGGCGCACCGCTTC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCALQLL*ATAHRF
Trigger: GAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTGTCGGCGGCTGATTaGCTCACTGTCTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLSAAD*LTVWVS
Trigger: GGACACCCAGACAGTGAGCAAATCAGCCGCCGACAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCT +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLLNLP*KLPGIA
Trigger: AGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCAGCTCCTGGCAGGTaGCCAGCTCAGGCACGCGCG +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPAPGR*PAQARA
Trigger: CGCGCGTGCCTGAGCTGGCAACCTGCCAGGAGCTGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCCAGCTCCTGGCAGGTaGCCAGCTCAGGCACGCGCG +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFPAPGR*PAQARA
Trigger: CGCGCGTGCCTGAGCTGGCAACCTGCCAGGAGCTGG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGCAAAGGCGCTGCCTaGGCCGCCAGCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSKGAA*AASSVG
Trigger: CCCCACAGAGCTGGCGGCCAAGGCAGCGCCTTTGCT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAGCAAAGGCGCTGCCTaGGCCGCCAGCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSKGAA*AASSVG
Trigger: CCCCACAGAGCTGGCGGCCAAGGCAGCGCCTTTGCT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGGCGGCTCAAGCCCGTaGGGCAGGCGACCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNGGSSP*GRRPGG
Trigger: TCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCGTCGAGCTCGCGCTaGCGCAGCAGGAAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFASSSR*RSRKPS
Trigger: CGAGGGCTTCCTGCTGCGCAAGCGCGAGCTCGACGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGCCCTCACGCTTGGGGTaGCCCTCATCTGTGGATGAT +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGPSRLG*PSSVDD
Trigger: ATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGG...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp CGCTTGGGGTTGCCCTCATCTGTGGATGATGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCGGCGTGTTCTGCCACGGAGTTAGCC +
Preference number: 5 (lower is better)
Translates to: RLGLPSSVDDVVGSV*PHRAISACSATELA
Trigger: GGCTAACTCCGTGGCAGAACACGCCGAGATCGCCCGATGGGGTCAGACACTACCTACCACATCATCCACAGATGAGGGCAACCCCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 90 bp AGCCCCGATCTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTTGTTaGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGTACTT +
Preference number: 5 (lower is better)
Translates to: SPDLGSPSELKGCCC*RLLGPPCCPPPLVL
Trigger: AAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CCA 90 bp TCCCAGATGCCACAGCCTTCTCGAGGCACAAAGAGGCGCCGGTTGTaGGCGCGCAGTTTGCTTTGGATGCTGAAGAGTAGCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SQMPQPSRGTKRRRL*ARSLLWMLKSSTSR
Trigger: CCTGGAGGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGTGCCTCGAGAAGGCTGTGGCATCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp TCAGCCATGGCGCTTTTGTTGAGTAATAGAGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGCACGCGCGCCTCCAACTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SAMALLLSNRDRPSS*QVASSGTRASNSVF
Trigger: GAAGACAGAGTTGGAGGCGCGCGTGCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAACAAAGAGGCGCCGGTaGTGGGCGCGCAGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPTKRRR*WARSLL
Trigger: AAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATTTCTCCTGCATCAGTaGCTGGCCCTCCCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPFLLHQ*LALPFY
Trigger: ATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAAA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAAGAGCTGGCGCGCCTaGGCCTGTGTGGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCKSWRA*ACVVLS
Trigger: GGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGCTCTGCAGCTGCTCTaGGCCACGGCGCACCGCTTC +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFALQLL*ATAHRF
Trigger: GAAGCGGTGCGCCGTGGCCAAGAGCAGCTGCAGAGC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCATGTTCATCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGATGAACA...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGATCTGACGATTGGGCAGGGAGCTTGGCTCAACTGGCTCCCTGCCCGGCCCCAAGTTGTAAATGCTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GSDDWAGSLAQLAPCPAPSCKCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAGCATTTACAACT...TGGGGCCGGGCAGGGAGCCAGTTGAGCCAAGCTCCCTGCCCAATCGTCAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTGTCGGCGGCTGATTaGCTCACTGTCTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLSAAD*LTVWVS
Trigger: GGACACCCAGACAGTGAGCAAATCAGCCGCCGACAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCT +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPLLNLP*KLPGIA
Trigger: AGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGCAAAGGCGCTGCCTaGGCCGCCAGCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSKGAA*AASSVG
Trigger: CCCCACAGAGCTGGCGGCCAAGGCAGCGCCTTTGCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAGAGTGGCCTTCCCTTaGACCAGCTCTCCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRVAFP*TSSPLV
Trigger: CACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTCT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTCACCCATGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCATGGGTGAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCTCACCCATGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCATGGGTGAG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCAAGCCCAGCTCCCCCTaGCTGAGCACACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPKPSSP*LSTQYR
Trigger: CCTGTACTGTGTGCTCAGCAAGGGGGAGCTGGGCTT...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGCCCTCACGCTTGGGGTaGCCCTCATCTGTGGATGAT +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRPSRLG*PSSVDD
Trigger: ATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGG...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp GCAGCTCCGACAGACAGCCATGCACGTGGTTCACACGGTTGCAAATaGCCTGAGGGTCGCAGGGCTGATAGCCCTGTAGCTGGGAGAATC +
Preference number: 5 (lower is better)
Translates to: AAPTDSHARGSHGCK*PEGRRADSPVAGRI
Trigger: GATTCTCCCAGCTACAGGGCTATCAGCCCTGCGACCCTCAGGTCATTTGCAACCGTGTGAACCACGTGCATGGCTGTCTGTCGGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000011895.14
CDS TCA 90 bp GCTTGTCCAGCTGGGCCTGGATCTCATCAGCCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCAGCTCCTGGCAGGTTGCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ACPAGPGSHQPWRFC*VIETAPAPGRLPAQ
Trigger: CTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGCTGGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp GAAAATCCCGGTGCCTTTTCATCGCCTCTTCTACCGACTCCACTGTaGAAGGGAGTTCAGCGCCAGACAGCGCCACCTCCTGGTTGCGCA +
Preference number: 5 (lower is better)
Translates to: ENPGAFSSPLLPTPL*KGVQRQTAPPPGCA
Trigger: TGCGCAACCAGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTTGCACAGTGGAGTCGGTAGAAGAGGCGATGAAAAGGCACCGGGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 90 bp TGCTCTCCAGCTCCGCCCAGCACTGCCGGATCTCACCTAATTTCTTaGGCACAGAGGCTGCCAGCTCCGGTTTCTCCTGCATCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: CSPAPPSTAGSHLIS*AQRLPAPVSPASVA
Trigger: AGCAACTGATGCAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAGAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCTGGAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp GGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGTACTTGTaGCATTGGGGGAGGCAGGGCATTGCAACACAAGGAATGAAACCG +
Preference number: 5 (lower is better)
Translates to: GDCWALHVVHLPWYL*HWGRQGIATQGMKP
Trigger: CGGTTTCATTCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS CCA 90 bp TCAGCCATGAACGCCTGGTGCCGGAGCCATCTCTTGTGCAGCTTGTaGCTGTCTTCCCGGGTGCCATCACGAGCCATCAGCATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SAMNAWCRSHLLCSL*LSSRVPSRAISIFS
Trigger: TGAGAAGATGCTGATGGCTCGTGATGGCACCCGGGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCGGCACCAGGCGTTCATGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCGCTGAAGGGTTGTTGTaGTTGGAGACTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPAEGLL*LETAGP
Trigger: GGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGC...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAGCGCTCATCTCCTCTTaGCGCTGTTCCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPALISS*RCSTNS
Trigger: GGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCGC...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACATCTCTTGTGCAGCTaGTGGCTGTCTTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLHLLCS*WLSSRV
Trigger: CACCCGGGAAGACAGCCACAAGCTGCACAAGAGATG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCACATCTCTTGTGCAGCTaGTGGCTGTCTTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPHLLCS*WLSSRV
Trigger: CACCCGGGAAGACAGCCACAAGCTGCACAAGAGATG...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATCCCCCACCAACTCCTaGCTCGCCTGCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSPTNS*LACSSG
Trigger: TCCGCTGGAGCAGGCGAGCAAGGAGTTGGTGGGGGA...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRRPWFF*MCCWTA
Trigger: GGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTAGTTGTAAATGCTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSCKCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAGCATTTACAACT...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCAGCCATGGCGCTTTaGTTGAGTAATAGAGACCGC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSAMAL*LSNRDR
Trigger: GCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATAC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALWRRSG*SSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp GGATCCAGGCCAACAGCTCCGCCGCCAGCTCCTCATAGCGTTCTATaGTCTTGTCCACCTCCAACACCTGGTCCAGGACCTTTCCAATCC +
Preference number: 5 (lower is better)
Translates to: GSRPTAPPPAPHSVL*SCPPPTPGPGPFQS
Trigger: GGATTGGAAAGGTCCTGGACCAGGTGTTGGAGGTGGACAAGATCATAGAACGCTATGAGGAGCTGGCGGCGGAGCTGTTGGCCTGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 90 bp GTTGTTGTTGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTaGTACTTGTGCCATTGGGGGAGGCAGGGCATTGCAACACAAGGA +
Preference number: 5 (lower is better)
Translates to: VVVGDCWALHVVHLP*YLCHWGRQGIATQG
Trigger: TCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGGAGCGGGTCTCTCTGTaGTCTTCTGTCTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGERVSL*SSVSIL
Trigger: CAAGATTGAGACAGAAGACAACAGAGAGACCCGCTC...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTTGTGGGCGCGCAGTTaGCTTTGGATGCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRLWARS*LWMLKS
Trigger: ACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AGGGTTTATTATAGGTACATACAGTGTGCGCCTGCCACACCGCCCCGCACCCCCCGCCACCTGCATCTTTaGCTGGTTCAGCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: RVYYRYIQCAPATPPRTPRHLHL*LVQLHR
Trigger: ACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGCG...GGGGGTGCGGGGCGGTGTGGCAGGCGCACACTGTATGTACCTATAATAAACCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTTTCTCCTGCATCAGTaGCTGGCCCTCCCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGFLLHQ*LALPFY
Trigger: ATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAAA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLRPWFF*MCCWTA
Trigger: GGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GTAACCCTGATTCCCTCCGTCCCAGGGAGGTGCTCCAGCCAGAAGCATGCAGGGTGTTCATCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: VTLIPSVPGRCSSQKHAGCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGATGAACA...CCCTGCATGCTTCTGGCTGGAGCACCTCCCTGGGACGGAGGGAATCAGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCTGTCGGCGGCTGATTaGCTCACTGTCTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALLSAAD*LTVWVS
Trigger: GGACACCCAGACAGTGAGCAAATCAGCCGCCGACAG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGAGTGGCCTTCCCTTaGACCAGCTCTCCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRVAFP*TSSPLV
Trigger: CACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTCT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSDRLDD*RLASSS
Trigger: CGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTAGCACCCTGGATGGTCCAGGGGACCTCACCAGCGCCCCCGTTGTCCATCCTTTCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LAPWMVQGTSPAPPLSILSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...AAGGATGGACAACGGGGGCGCTGGTGAGGTCCCCTGGACCATCCAGGGTGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTCCCCGCCCTCACGCTaGGGGTTGCCCTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNSPPSR*GLPSSV
Trigger: CACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 90 bp GTCCCATTTCCAGTAGCGCCCGGCACTGGCGTGACAGCTGGGCGATaGTTTCCTCATAGTTCTCCACGCCCTGTTCCAGTTGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: VPFPVAPGTGVTAGR*FPHSSPRPVPVVNA
Trigger: AGCATTTACAACTGGAACAGGGCGTGGAGAACTATGAGGAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACTGGAAATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGAAGGGTTGTTGTTGTaGGAGACTGCTGGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALEGLLL*ETAGPS
Trigger: GGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGCGCTCATCTCCTCTTaGCGCTGTTCCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCALISS*RCSTNS
Trigger: GGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCGC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCATCTCTTGTGCAGCTaGTGGCTGTCTTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALHLLCS*WLSSRV
Trigger: CACCCGGGAAGACAGCCACAAGCTGCACAAGAGATG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGTGTTCATCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGATGAACA...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTAGTGCTCTGTTCATCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGATGAACAGAGCAC...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACTGTCGGCGGCTGATTaGCTCACTGTCTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSLSAAD*LTVWVS
Trigger: GGACACCCAGACAGTGAGCAAATCAGCCGCCGACAG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGACACATCCCTGGGTTaGTCAGCTGCCCCGATCTGG +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSDTSLG*SAAPIW
Trigger: CCAGATCGGGGCAGCTGACAAACCCAGGGATGTGTC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCGACACATCCCTGGGTTaGTCAGCTGCCCCGATCTGG +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFDTSLG*SAAPIW
Trigger: CCAGATCGGGGCAGCTGACAAACCCAGGGATGTGTC...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAAGCCCAGCTCCCCCTaGCTGAGCACACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFKPSSP*LSTQYR
Trigger: CCTGTACTGTGTGCTCAGCAAGGGGGAGCTGGGCTT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAAGCCCAGCTCCCCCTaGCTGAGCACACAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSKPSSP*LSTQYR
Trigger: CCTGTACTGTGTGCTCAGCAAGGGGGAGCTGGGCTT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCCCTCACGCTTGGGGTaGCCCTCATCTGTGGATGAT +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALPSRLG*PSSVDD
Trigger: ATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 90 bp ACAAGCTGGTCCAGTAGTTTTTGCATCCACTGCTGGGCCCTCAGCTaGTTTTCTTGGCTCTTCTCTAGCAGCCGAGCCACTGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TSWSSSFCIHCWALS*FSWLFSSSRATASC
Trigger: GCAGGAGGCAGTGGCTCGGCTGCTAGAGAAGAGCCAAGAAAATCAGCTGAGGGCCCAGCAGTGGATGCAAAAACTACTGGACCAGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTCGCCACCTGCATCTTTaGCTGGTTCAGCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRHLHL*LVQLHR
Trigger: ACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGCG...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATTTCTCCTGCATCAGTaGCTGGCCCTCCCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLFLLHQ*LALPFY
Trigger: ATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAAA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGCGGATGGACTGTAACTTCTaGAGCTGGCTGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: PFYFRPTVAHPQSFRPLRMDCNF*SWLLTV
Trigger: CACTGTCAACAGCCAGCTCAAGAAGTTACAGTCCAT...CCGCAAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCAGTGGCAGCCGCTCTaGAACCCAAGCCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFQWQPL*NPSQFI
Trigger: GATGAACTGGCTTGGGTTCAAGAGCGGCTGCCACTG...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALRPWFF*MCCWTA
Trigger: GGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCRPWFF*MCCWTA
Trigger: GGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATGTTCATCCTTGCCCTaGTCCTCACTCATCATGAGC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPCSSLP*SSLIMS
Trigger: GCTCATGATGAGTGAGGACAAGGGCAAGGATGAACA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAAGTTGTAAATGCTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSCKCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAGCATTTACAACT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATAGAGTGGCCTTCCCTTaGACCAGCTCTCCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNRVAFP*TSSPLV
Trigger: CACCAGGGGAGAGCTGGTCAAAGGGAAGGCCACTCT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCTCACCCATGACCGGTaGGACGACTTGCGGTTAGCG +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLTHDR*DDLRLA
Trigger: CGCTAACCGCAAGTCGTCCAACCGGTCATGGGTGAG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCACCCTCACGCTTGGGGTaGCCCTCATCTGTGGATGAT +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSPSRLG*PSSVDD
Trigger: ATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGG...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCATCTGCTAAAGCCTaGATCCGAGAGCACTCAAAG +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSSAKA*IREHSK
Trigger: CTTTGAGTGCTCTCGGATCAAGGCTTTAGCAGATGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCATCTGCTAAAGCCTaGATCCGAGAGCACTCAAAG +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSSAKA*IREHSK
Trigger: CTTTGAGTGCTCTCGGATCAAGGCTTTAGCAGATGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAAGCTCACCCCACGCCTaGTCAATATCCCAGATGCCA +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSSSPHA*SISQMP
Trigger: TGGCATCTGGGATATTGACAAGGCGTGGGGTGAGCT...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCAGGCTCTCTGCAGCTaGAACCGCCACCTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNQALCS*NRHLHL
Trigger: AAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCAATGGACTGTAACTTCTaGAGCTGGCTGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPMDCNF*SWLLTV
Trigger: CACTGTCAACAGCCAGCTCAAGAAGTTACAGTCCAT...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATCAGTGGCAGCCGCTCTaGAACCCAAGCCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNQWQPL*NPSQFI
Trigger: GATGAACTGGCTTGGGTTCAAGAGCGGCTGCCACTG...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGGCCCTGGTTCTTTTaGATGTGCTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFRPWFF*MCCWTA
Trigger: GGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTGTGCTCTGTTCATCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGATGAACAGAGCAC...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTATCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACCACCATCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ASGKGPRYGYRDSNPLPPSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...TGGTGGTAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCGAGCGGGTCTCTCTGTaGTCTTCTGTCTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCERVSL*SSVSIL
Trigger: CAAGATTGAGACAGAAGACAACAGAGAGACCCGCTC...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTTTCTCCTGCATCAGTaGCTGGCCCTCCCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCFLLHQ*LALPFY
Trigger: ATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAAA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TTGGAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCAGTGCTCTGTTCATCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: LECRSPFYFRPTVAHPQSVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGATGAACAGAGCAC...TGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCAGTTGTAAATGCTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSCKCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAGCATTTACAACT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCTCAGCCATGGCGCTTTaGTTGAGTAATAGAGACCGC +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCSAMAL*LSNRDR
Trigger: GCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGA...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCAGCCATGGCGCTTTaGTTGAGTAATAGAGACCGC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSAMAL*LSNRDR
Trigger: GCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATTTGTGGGCGCGCAGTTaGCTTTGGATGCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNLWARS*LWMLKS
Trigger: ACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAA...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GGGTTGGCGAGCGGGAAGGGACCGAGATATGGCTATAGGGACAGCAATCCCCTACTTGTGGTCAAATCTTaGAGCCAAGAGTTCCAACTT +
Preference number: 5 (lower is better)
Translates to: GLASGKGPRYGYRDSNPLLVVKS*SQEFQL
Trigger: AAGTTGGAACTCTTGGCTCAAAGATTTGACCACAAG...TAGGGGATTGCTGTCCCTATAGCCATATCTCGGTCCCTTCCCGCTCGCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp TCCGCAGTCATTCCGGCCCTTGCGGATGAGAAGTTGTCTTTGTGTCCACAGTGCATGGACTGTAACTTCTaGAGCTGGCTGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: SAVIPALADEKLSLCPQCMDCNF*SWLLTV
Trigger: CACTGTCAACAGCCAGCTCAAGAAGTTACAGTCCAT...GCACTGTGGACACAAAGACAACTTCTCATCCGCAAGGGCCGGAATGACTGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTATGGACTGTAACTTCTaGAGCTGGCTGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALMDCNF*SWLLTV
Trigger: CACTGTCAACAGCCAGCTCAAGAAGTTACAGTCCAT...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATGTGCTCTGTTCATCCTaGCCCTTGTCCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNVLCSS*PLSSLI
Trigger: GATGAGTGAGGACAAGGGCAAGGATGAACAGAGCAC...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp GAGTGCAGAAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCAGTTGTAAATGCTTCTaGAGCAGCTGCAGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: ECRSPFYFRPTVAHPQSFSCKCF*SSCRVL
Trigger: GAGCACCCTGCAGCTGCTCAAGAAGCATTTACAACT...GAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTTCTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp AAGTCCCTTCTATTTCAGGCCCACAGTGGCACATCCGCAGTCATTCCGGCCCTTTCCTGGGTCTGGAGCTaGAAGACATGCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KSLLFQAHSGTSAVIPALSWVWS*KTCFFF
Trigger: GAAAAAGAAGCATGTCTTCAAGCTCCAGACCCAGGA...AAGGGCCGGAATGACTGCGGATGTGCCACTGTGGGCCTGAAATAGAAGGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS-3UTR CAA 90 bp CTCAACTGGCTCCCTGCCCGGCCCCACCAAGCTCAGTTATTGCATAAAAAGAATATGGACTGTAACTTCTaGAGCTGGCTGTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: LNWLPARPHQAQLLHKKNMDCNF*SWLLTV
Trigger: CACTGTCAACAGCCAGCTCAAGAAGTTACAGTCCAT...ATTCTTTTTATGCAATAACTGAGCTTGGTGGGGCCGGGCAGGGAGCCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp CGTGCGCGCCGCCCGCCGTGCCCGCCGCGCCACCACTaGCGCTCGTGGCCTCTAGGAGGCGCTCCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: RARRPPCPPRHH*RSWPLGGAPCP
Trigger: GGGACAAGGAGCGCCTCCTAGAGGCCACGAGCGGCAGTGGTGGCGCGGCGGGCACGGCGGGCGGCGCGCACG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp TGCTGCGCCAGCAGGCGAGCGGTGCTGGACAGGTCGTaGGCGCCGCCCGCCGTGCCCGCCGCGCCACCACTG +
Preference number: 6 (lower is better)
Translates to: CCASRRAVLDRS*APPAVPAAPPL
Trigger: CAGTGGTGGCGCGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CGAGCGCTAGCCGCGCGCTCCGCCAGGCCAGCCAAATaGAAAGGCTCGGCGCCCGGGCCCACGGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RALAARSARPAK*KGSAPGPTEPP
Trigger: GGGCGGCTCCGTGGGCCCGGGCGCCGAGCCTTTGCATTTGGCTGGCCTGGCGGAGCGCGCGGCTAGCGCTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CGCCCGCCGTGCCCGCCGCGCCACCACTGCCGCTCGTaGCCTCTAGGAGGCGCTCCTTGTCCCGCGCCCAAC +
Preference number: 6 (lower is better)
Translates to: RPPCPPRHHCRS*PLGGAPCPAPN
Trigger: GTTGGGCGCGGGACAAGGAGCGCCTCCTAGAGGCCACGAGCGGCAGTGGTGGCGCGGCGGGCACGGCGGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GCGCCCCACTCGGCTCCTAGCTCCTCGGCGCCCTGGTaGAGGCGCGTCGCCTGTGCGGGGAAGCGTTCGGCC +
Preference number: 6 (lower is better)
Translates to: APHSAPSSSAPW*RRVACAGKRSA
Trigger: GGCCGAACGCTTCCCCGCACAGGCGACGCGCCTGCACCAGGGCGCCGAGGAGCTAGGAGCCGAGTGGGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CAGCTGCTCTTGGCCACGGCGCACCGCTTCGGCCTCTaGGCTGCGCAGCGAGGCCAGCACGCCCGCGCGCTC +
Preference number: 6 (lower is better)
Translates to: QLLLATAHRFGL*AAQRGQHARAL
Trigger: GAGCGCGCGGGCGTGCTGGCCTCGCTGCGCAGCCCAGAGGCCGAAGCGGTGCGCCGTGGCCAAGAGCAGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp AGGTCGGCGCCAAATTGGTGCAGCGCCCGCGCCTCCTaGAGCCGCCGTTCCCGGCGCGCAGCCGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RSAPNWCSARAS*SRRSRRAAASS
Trigger: GGAAGAGGCGGCTGCGCGCCGGGAACGGCGGCTGCAGGAGGCGCGGGCGCTGCACCAATTTGGCGCCGACCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CCACGGTGCGCTTCCACCTCCCCGGTGAGAGCGCGGTaGTGGCGCGCCAGGCGACGGCTGGACGCTTCGTCG +
Preference number: 6 (lower is better)
Translates to: PRCASTSPVRAR*WRARRRLDASS
Trigger: CGACGAAGCGTCCAGCCGTCGCCTGGCGCGCCAGCACCGCGCTCTCACCGGGGAGGTGGAAGCGCACCGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp GCAGGATCTTATGCTGCGCCAGCAGGCGAGCGGTGCTaGACAGGTCGTGCGCGCCGCCCGCCGTGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: AGSYAAPAGERC*TGRARRPPCPP
Trigger: CGGCGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CGGGCCGAGGTGTCCGCTCGGGCGGCTCAAGCCCGTTaGGCAGGCGACCAGGGGGAAGCTCGCGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RAEVSARAAQAR*AGDQGEAREAE
Trigger: CTCAGCCTCGCGAGCTTCCCCCTGGTCGCCTGCCCAACGGGCTTGAGCCGCCCGAGCGGACACCTCGGCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp CCCCGCCCGGGGCGCGCTCTCCACTGCCCGTCGCTTCTCGCGCACTaGGGCGCGCACCTCGGCCACCTCCAGCACGTGGTTCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: PRPGRALHCPSLLAH*GAHLGHLQHVVLHQ
Trigger: CTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAAGTGCGCGAGAAGCGACGGGCAGTGGAGAGCGCGCCCCGGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS TCA 72 bp CCGTTGGGCAGGCGACCAGGGGGAAGCTCGCGAGGCTaGGGCAGCGACGGCCCAGCAGGGATCCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PLGRRPGGSSRG*GSDGPAGIPGP
Trigger: AGGCCCAGGGATCCCTGCTGGGCCGTCGCTGCCTCAGCCTCGCGAGCTTCCCCCTGGTCGCCTGCCCAACGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS GCA 72 bp CCTGCAGGATCTTATGCTGCGCCAGCAGGCGAGCGGTaGTGGACAGGTCGTGCGCGCCGCCCGCCGTGCCCG +
Preference number: 6 (lower is better)
Translates to: PAGSYAAPAGER*WTGRARRPPCP
Trigger: CGGGCACGGCGGGCGGCGCGCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GCCCGCCGGCCGCCCAGCTCGCCCTGCAGGATCTTATaGTGCGCCAGCAGGCGAGCGGTGCTGGACAGGTCG +
Preference number: 6 (lower is better)
Translates to: ARRPPSSPCRIL*CASRRAVLDRS
Trigger: CGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGGCCGGCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CACCACGCGCACCTGCAGAGCCACCACCAGCGGCCCTaGGCCACTGGCTCCTCCCAGTGTCGCCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: HHAHLQSHHQRP*ATGSSQCRQLA
Trigger: CGCCAGCTGGCGACACTGGGAGGAGCCAGTGGCGCAGGGCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CAGGCTGCGAGGCAGCGGCCCCTCGACGGCGCCTGCTaGCTCCTGCGCCCGCACCAGCCAGTCCAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: QAARQRPLDGAC*LLRPHQPVQES
Trigger: ACTTTCCTGGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGCCGTCGAGGGGCCGCTGCCTCGCAGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp AACACCTCCTGCTCGCGGCTGGCGATGGCCTCGGCGTaGTCGCCAGCGTACACCGTCCGCAGCTGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: NTSCSRLAMASA*SPAYTVRSWAA
Trigger: GGCGGCCCAGCTGCGGACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGGTGTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CGCCGGGCACCTACCAGCCCGGTCAGCAGGGCCCACTaGCGAAGGACACTGTCACGCTGGGCAGCCACCCGC +
Preference number: 6 (lower is better)
Translates to: RRAPTSPVSRAH*RRTLSRWAATR
Trigger: GCGGGTGGCTGCCCAGCGTGACAGTGTCCTTCGCCAGTGGGCCCTGCTGACCGGGCTGGTAGGTGCCCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp AGTGCGCCCCACTCGGCTCCTAGCTCCTCGGCGCCCTaGTGCAGGCGCGTCGCCTGTGCGGGGAAGCGTTCG +
Preference number: 6 (lower is better)
Translates to: SAPHSAPSSSAP*CRRVACAGKRS
Trigger: CGAACGCTTCCCCGCACAGGCGACGCGCCTGCACCAGGGCGCCGAGGAGCTAGGAGCCGAGTGGGGCGCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS TCA 72 bp CTCGCCTGCTCCAGCGGAAGCGCCGCCGTCTGCGCCTaGAGCTCGCCCACCTCTCGGCACCACTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: LACSSGSAAVCA*SSPTSRHHSST
Trigger: GGTGGAGGAGTGGTGCCGAGAGGTGGGCGAGCTTCAGGCGCAGACGGCGGCGCTTCCGCTGGAGCAGGCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CCCGCGCGCTCCAGCACCTCCTCCAAGCGCGGCCCGTaGGCCTGGATCTCCCGCCGCAGGCCCTGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: PARSSTSSKRGP*AWISRRRPWFF
Trigger: AAAGAACCAGGGCCTGCGGCGGGAGATCCAGGCTCACGGGCCGCGCTTGGAGGAGGTGCTGGAGCGCGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp CGCCGGCCGCCCAGCTCGCCCTGCAGGATCTTATGCTaGGCCAGCAGGCGAGCGGTGCTGGACAGGTCGTGC +
Preference number: 6 (lower is better)
Translates to: RRPPSSPCRILC*ASRRAVLDRSC
Trigger: GCACGACCTGTCCAGCACCGCTCGCCTGCTGGCGCAGCATAAGATCCTGCAGGGCGAGCTGGGCGGCCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp TCCAGCAGGCGCACCAGGCGCTCGCCCACCGCACTCTaGCGCTCCCCCACCAACTCCTTGCTCGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSRRTRRSPTAL*RSPTNSLLACS
Trigger: GGAGCAGGCGAGCAAGGAGTTGGTGGGGGAGCGGCAGAGTGCGGTGGGCGAGCGCCTGGTGCGCCTGCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CTCCGTGGCAGCTCCTCCGCACGATCCGCTAACTCCTaGCGCTCCGACCGGGGCCGGACCAACTCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: LRGSSSARSANS*RSDRGRTNSVA
Trigger: GGCGACGGAGTTGGTCCGGCCCCGGTCGGAGCGCCAGGAGTTAGCGGATCGTGCGGAGGAGCTGCCACGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CTGCTGCCCAGCTCCCGGCTCTGCAGGAGCGGTTCCTaGGCTGTCAGCCAGGCGTCAGCCACCACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPSSRLCRSGS*AVSQASATTAS
Trigger: GGAGGCCGTGGTGGCTGACGCCTGGCTGACAGCTCAGGAACCGCTCCTGCAGAGCCGGGAGCTGGGCAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CTGGCGCACATACCCAACCCGGGTCCGCACCTCCGCTaGCAGCGTGTCCGAGGCCCTGCGGGCCAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: LAHIPNPGPHLR*QRVRGPAGQRL
Trigger: GAGCCTTTGGCCCGCAGGGCCTCGGACACGCTGTCAGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp TACTGTTCCACCTGGAAGGCGGCGTCCAGCGTCTGCTaGCGCCGTTCGGCCGCTTCCCGCAGCCCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: YCSTWKAASSVC*RRSAASRSPVQ
Trigger: CTGGACCGGGCTGCGGGAAGCGGCCGAACGGCGGCAGCAGACGCTGGACGCCGCCTTCCAGGTGGAACAGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp CCAGCGTACACCGTCCGCAGCTGGGCCGCCCCTTCCTaGAGCTGCCGTACCTGGGACACGAGGAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PAYTVRSWAAPS*SCRTWDTRSCR
Trigger: CCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGGAAGGGGCGGCCCAGCTGCGGACGGTGTACGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CTCGCAGGGTCCGCTGCATGGAGCTGGCACTGGGTCTaGGTTCAGGTGGTGCCGTCAGGCGGGGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LAGSAAWSWHWV*VQVVPSGGAAS
Trigger: GGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp TCCAGCCCTGCAACACCTCCTGCTCGCGGCTGGCGATaGCCTCGGCGTGCTCGCCAGCGTACACCGTCCGCA +
Preference number: 6 (lower is better)
Translates to: SSPATPPARGWR*PRRARQRTPSA
Trigger: TGCGGACGGTGTACGCTGGCGAGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGGTGTTGCAGGGCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GCTCCTTCCAGCCCTGCAACACCTCCTGCTCGCGGCTaGCGATGGCCTCGGCGTGCTCGCCAGCGTACACCG +
Preference number: 6 (lower is better)
Translates to: APSSPATPPARG*RWPRRARQRTP
Trigger: CGGTGTACGCTGGCGAGCACGCCGAGGCCATCGCCAGCCGCGAGCAGGAGGTGTTGCAGGGCTGGAAGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp TGTCGGGGCCGCGGGTTCTACCTTCCCCGAGGTCTCTaGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGG +
Preference number: 6 (lower is better)
Translates to: CRGRGFYLPRGL*QPVNARLETLG
Trigger: CCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAAGGTAGAACCCGCGGCCCCGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp GGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATACCCAACCCGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: GSRSMRGWRRSG*SSWRTYPTRVR
Trigger: GCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp GAGGTCTCTGGCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTaGAGCTCCTGGCGCACATACCCAACCCGGGTCCGCACCTCCGCT +
Preference number: 6 (lower is better)
Translates to: EVSGSRSMRGWRRSG*SSWRTYPTRVRTSA
Trigger: AGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp GCAGCCGGTCAATGCGCGGCTGGAGACGCTCGGGCTTaGGCTCCTGGCGCACATACCCAACCCGGGTCCGCA +
Preference number: 6 (lower is better)
Translates to: AAGQCAAGDARA*APGAHTQPGSA
Trigger: TGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp AGTATCCAAATCGCGCAGGAAACGCTGCAGGCGACCTaGCGCCGCAACCGCCTCGCCGCAGGCCTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SIQIAQETLQAT*RRNRLAAGLSR
Trigger: GCGGCTCAGGCCTGCGGCGAGGCGGTTGCGGCGGCAGGTCGCCTGCAGCGTTTCCTGCGCGATTTGGATACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CGAGGCAGCGGCCCCTCGACGGCGCCTGCTGCCTCCTaGGCCCGCACCAGCCAGTCCAGGAAAGTATCCAAA +
Preference number: 6 (lower is better)
Translates to: RGSGPSTAPAAS*ARTSQSRKVSK
Trigger: TTTGGATACTTTCCTGGACTGGCTGGTGCGGGCGCAGGAGGCAGCAGGCGCCGTCGAGGGGCCGCTGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CCAGCTCCGCGCCCTCGGACGCTAGCAGCGCTTCACTaGCAGCCACGATGCGCGCGTAGTCCTCCTCACGCT +
Preference number: 6 (lower is better)
Translates to: PAPRPRTLAALH*QPRCARSPPHA
Trigger: AGCGTGAGGAGGACTACGCGCGCATCGTGGCTGCCAGTGAAGCGCTGCTAGCGTCCGAGGGCGCGGAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CCGCTGCATGGAGCTGGCACTGGGTCTGGGTTCAGGTaGTGCCGTCAGGCGGGGCAGCCTCCTCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PLHGAGTGSGFR*CRQAGQPPPLL
Trigger: GAGAAGCGGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp TGGGCTGCGATGTCCCCCTCCAGCAGCCCGTGCTTCTaGAGCAGGTCATCGGCCTCCACCAGGTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: WAAMSPSSSPCF*SRSSASTRCCP
Trigger: TGGGCAGCACCTGGTGGAGGCCGATGACCTGCTGCAGAAGCACGGGCTGCTGGAGGGGGACATCGCAGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CGAGAAGCTTCCAGCTCTGCGCGCCGCCGTGCTGCCTaGTCCTGCAGCTCCGACAGACAGCCATGCACGTGG +
Preference number: 6 (lower is better)
Translates to: REASSSARRRAA*SCSSDRQPCTW
Trigger: CCACGTGCATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CAGGCTCCGAGAAGCTTCCAGCTCTGCGCGCCGCCGTaGTGCCTGCTCCTGCAGCTCCGACAGACAGCCATG +
Preference number: 6 (lower is better)
Translates to: QAPRSFQLCAPP*CLLLQLRQTAM
Trigger: CATGGCTGTCTGTCGGAGCTGCAGGAGCAGGCAGCACGGCGGCGCGCAGAGCTGGAAGCTTCTCGGAGCCTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp TCGGCGAACAACTGTTCGGCTTCCACCACGCGCACCTaGAGAGCCACCACCAGCGGCCCTGCGCCACTGGCT +
Preference number: 6 (lower is better)
Translates to: SANNCSASTTRT*RATTSGPAPLA
Trigger: AGCCAGTGGCGCAGGGCCGCTGGTGGTGGCTCTGCAGGTGCGCGTGGTGGAAGCCGAACAGTTGTTCGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CACAAGCCGAGCAGTTTGTGCCAGCCAACCTCGAGGTaGGGCAGCCACTCGTCTAGCGCCAGACCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: HKPSSLCQPTSR*GSHSSSARPGP
Trigger: GGGCCCCGGTCTGGCGCTAGACGAGTGGCTGCCGCACCTCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GAGCCACTGCCTCCTGCGCCTGCTCCCCGTAGGCGTTaGCTTGCCGCAGCAGGCTCTCTGCAGCTTGAACCG +
Preference number: 6 (lower is better)
Translates to: EPLPPAPAPRRR*LAAAGSLQLEP
Trigger: CGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAGCAGGCGCAGGAGGCAGTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CCAGCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTTaGTGGCCTCGAAGAGCTGGCGCGCCTTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PAPRSSALAGPP*WPRRAGAPWPV
Trigger: CACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp CTGCATGGAGCTGGCACTGGGTCTGGGTTCAGGTGGTaGCGTCAGGCGGGGCAGCCTCCTCCGCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LHGAGTGSGFRW*RQAGQPPPLLL
Trigger: GAGGAGAAGCGGAGGAGGCTGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CGCACTTGGGCGCGCACCTCGGCCACCTCCAGCACGTaGTTCTCCACCAGCAGCACCGCGCTCATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: RTWARTSATSST*FSTSSTALISS
Trigger: AGAGGAGATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGAGGTGGCCGAGGTGCGCGCCCAAGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp GCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTTGCTaGCCTCGAAGAGCTGGCGCGCCTTGGCCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: APRSSALAGPPC*PRRAGAPWPVW
Trigger: CCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp AGCCGCTTGTCCAGCTCCGCGAAGCTCTGCACTAGCTaGTCCGCCTTGCTGGCCTCGAAGAGCTGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: SRLSSSAKLCTS*SALLASKSWRA
Trigger: GGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGGACAAGCGGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CAAAGGCTCGCAGGGTCCGCTGCATGGAGCTGGCACTaGGTCTGGGTTCAGGTGGTGCCGTCAGGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: QRLAGSAAWSWH*VWVQVVPSGGA
Trigger: TGCCCCGCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp TCAATGCGCGGCTGGAGACGCTCGGGCTTGAGCTCCTaGCGCACATACCCAACCCGGGTCCGCACCTCCGCT +
Preference number: 6 (lower is better)
Translates to: SMRGWRRSGLSS*RTYPTRVRTSA
Trigger: AGCGGAGGTGCGGACCCGGGTTGGGTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp CACTGCCTCCTGCGCCTGCTCCCCGTAGGCGTTGCCTaGCCGCAGCAGGCTCTCTGCAGCTTGAACCGCCAC +
Preference number: 6 (lower is better)
Translates to: HCLLRLLPVGVA*PQQALCSLNRH
Trigger: GTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAGCAGGCGCAGGAGGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp CGGCGCCCGCTGGCCCTACGCTCCCCGCCCTCACGCTaGGGGTTGCCCTCATCTGTGGATGATGTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: RRPLALRSPPSR*GLPSSVDDVVG
Trigger: ACCTACCACATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGAGCGTAGGGCCAGCGGGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp CAGCCGAGCCACTGCCTCCTGCGCCTGCTCCCCGTAGGCGTTGCCTaGCCGCAGCAGGCTCTCTGCAGCTTGAACCGCCACCTGCATCTT +
Preference number: 6 (lower is better)
Translates to: QPSHCLLRLLPVGVA*PQQALCSLNRHLHL
Trigger: AAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAGCAGGCGCAGGAGGCAGTGGCTCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 90 bp AGCCGCTTGTCCAGCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTaGCTGGCCTCGAAGAGCTGGCGCGCCTTGGCCTGTGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SRLSSSAKLCTSWSA*LASKSWRALACVVL
Trigger: GAGCACCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGGACAAGCGGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp GCCTCCCTGCGCTCCTCCCACAAGCCGAGCAGTTTGTaGCAGCCAACCTCGAGGTGCGGCAGCCACTCGTCT +
Preference number: 6 (lower is better)
Translates to: ASLRSSHKPSSL*QPTSRCGSHSS
Trigger: AGACGAGTGGCTGCCGCACCTCGAGGTTGGCTGGCACAAACTGCTCGGCTTGTGGGAGGAGCGCAGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CCTTCCTGCAGCTGCCGTACCTGGGACACGAGGAGCTaGAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PSCSCRTWDTRS*RSCSKARRVRC
Trigger: GCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGCTCCTCGTGTCCCAGGTACGGCAGCTGCAGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GTGCAAGGGAGTTCAGCGCCAGACAGCGCCACCTCCTaGTTGCGCAGCACCGCAAGCGCCTGGCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: VQGSSAPDSATS*LRSTASAWHRS
Trigger: AGACCTGTGCCAGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp TGCACTAGCTGGTCCGCCTTGCTGGCCTCGAAGAGCTaGCGCGCCTTGGCCTGTGTGGTGCTCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CTSWSALLASKS*RALACVVLSSS
Trigger: GGAGCTGGAGAGCACCACACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CGTGCTCAAAGGCTCGCAGGGTCCGCTGCATGGAGCTaGCACTGGGTCTGGGTTCAGGTGGTGCCGTCAGGC +
Preference number: 6 (lower is better)
Translates to: RAQRLAGSAAWS*HWVWVQVVPSG
Trigger: GCCTGACGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GCAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTGCATaGAGCTGGCACTGGGTCTGGGTTCAGGTGGTGCCG +
Preference number: 6 (lower is better)
Translates to: AGRAQRLAGSAA*SWHWVWVQVVP
Trigger: CGGCACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GACGCAGCAAAGGCGCTGCCTTGGCCGCCAGCTCTGTaGGGTCCCCAAAGAACTTGCGCCCCAGTAAGGGGG +
Preference number: 6 (lower is better)
Translates to: DAAKALPWPPAL*GPQRTCAPVRG
Trigger: CCCCCTTACTGGGGCGCAAGTTCTTTGGGGACCCCACAGAGCTGGCGGCCAAGGCAGCGCCTTTGCTGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp TTCCCCGAGGTCTCTGGCAGCCGGTCAATGCGCGGCTaGAGACGCTCGGGCTTGAGCTCCTGGCGCACATAC +
Preference number: 6 (lower is better)
Translates to: FPEVSGSRSMRG*RRSGLSSWRTY
Trigger: GTATGTGCGCCAGGAGCTCAAGCCCGAGCGTCTCCAGCCGCGCATTGACCGGCTGCCAGAGACCTCGGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp TCCAGCTCCGCGAAGCTCTGCACTAGCTGGTCCGCCTaGCTGGCCTCGAAGAGCTGGCGCGCCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: SSSAKLCTSWSA*LASKSWRALAC
Trigger: ACAGGCCAAGGCGCGCCAGCTCTTCGAGGCCAGCAAGGCGGACCAGCTAGTGCAGAGCTTCGCGGAGCTGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp TGCTGGCGCGCCAGGCGACGGCTGGACGCTTCGTCGTaGCCAAAATCTCCAGCGGCTGCTAGACGATACGCG +
Preference number: 6 (lower is better)
Translates to: CWRARRRLDASS*PKSPAAARRYA
Trigger: CGCGTATCGTCTAGCAGCCGCTGGAGATTTTGGTCACGACGAAGCGTCCAGCCGTCGCCTGGCGCGCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp TGCAGCATTGAGGGCCTCCACTCGCTCACTCTGGGCTaGGATGTCCCCCTCCAGCAGCCCGTGCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: CSIEGLHSLTLG*DVPLQQPVLLQ
Trigger: CTGCAGAAGCACGGGCTGCTGGAGGGGGACATCGCAGCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CAGTCCAGGAAAGTATCCAAATCGCGCAGGAAACGCTaGAGGCGACCTGCCGCCGCAACCGCCTCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: QSRKVSKSRRKR*RRPAAATASPQ
Trigger: CTGCGGCGAGGCGGTTGCGGCGGCAGGTCGCCTGCAGCGTTTCCTGCGCGATTTGGATACTTTCCTGGACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp AAGGGAGTTCAGCGCCAGACAGCGCCACCTCCTGGTTaGGCAGCACCGCAAGCGCCTGGCACAGGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: KGVQRQTAPPPG*AAPQAPGTGLS
Trigger: TGAGAGACCTGTGCCAGGCGCTTGCGGTGCTGCGCAACCAGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CTGTGGAAGCGCAGGGCGTCGGCCGTGGAGCTGACGTaGAGACGAGCATCTTCACAGGCTGCTAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LWKRRASAVELT*RRASSQAASSS
Trigger: GGAGCTGCTAGCAGCCTGTGAAGATGCTCGTCTGCACGTCAGCTCCACGGCCGACGCCCTGCGCTTCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp GACCTGAGGGTCGCAGGGCTGGGAGAATCTCAGGGCTaGAGCATTGAGGGCCTCCACTCGCTCACTCTGGGC +
Preference number: 6 (lower is better)
Translates to: DLRVAGLGESQG*SIEGLHSLTLG
Trigger: GCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGAGATTCTCCCAGCCCTGCGACCCTCAGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS CAA 90 bp GTTGCGCAGCACCGCAAGCGCCTGGCACAGGTCTCTCAGGAAGAGTaGATAGACGTGCGCTTGGACCAGCGCCTCCCTGCGCTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: VAQHRKRLAQVSQEE*IDVRLDQRLPALLP
Trigger: TGGGAGGAGCGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAACTCTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTGCTGCGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS TCA 72 bp CCGATCCCAGCCCCGATCTGGGCTCTCCCAGCGAGCTaGAGGGTTGTTGTTGTTGGAGACTGCTGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: PIPAPIWALPAS*RVVVVGDCWAL
Trigger: GAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCTGGGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS TCA 72 bp GGTCGCAGGGCTGGGAGAATCTCAGGGCTGCAGCATTaGGGGCCTCCACTCGCTCACTCTGGGCTGCGATGT +
Preference number: 6 (lower is better)
Translates to: GRRAGRISGLQH*GPPLAHSGLRC
Trigger: ACATCGCAGCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGAGATTCTCCCAGCCCTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS GCA 72 bp CGATCCACAACTCGCAGGCATGTACCTCGCCGAACATaGGGTACACGGCGAGCGCGTCCCGAAGCCACTGTC +
Preference number: 6 (lower is better)
Translates to: RSTTRRHVPRRT*GTRRARPEATV
Trigger: GACAGTGGCTTCGGGACGCGCTCGCCGTGTACCGCATGTTCGGCGAGGTACATGCCTGCGAGTTGTGGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GTCCAGGTCGTGGGCCACCTGATGCAGCTCCTTGGATaGCAGCAACAAGCGGCGTCGCTCCTGCAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: VQVVGHLMQLLG*QQQAASLLQRL
Trigger: GAGCCTTTGCAGGAGCGACGCCGCTTGTTGCTGGCATCCAAGGAGCTGCATCAGGTGGCCCACGACCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp AGCTGCAGGTCGTGCTCAAAGGCTCGCAGGGTCCGCTaGATGGAGCTGGCACTGGGTCTGGGTTCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: SCRSCSKARRVR*MELALGLGSGG
Trigger: ACCACCTGAACCCAGACCCAGTGCCAGCTCCATGCAGCGGACCCTGCGAGCCTTTGAGCACGACCTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp GCTGCTTTTCGGAAGGCCTCGTGTCGCCGGATAAGCTaGTCCACCTCATCCACACTGCTGCCCAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: AAFRKASCRRIS*STSSTLLPSSR
Trigger: CCGGGAGCTGGGCAGCAGTGTGGATGAGGTGGAGCAGCTTATCCGGCGACACGAGGCCTTCCGAAAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GATGACACATCCCTGGGTTTGTCAGCTGCCCCGATCTaGCCCGCGATGCCGTCCATCCAGGAGAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: DDTSLGLSAAPI*PAMPSIQESRS
Trigger: CGACCTGCTCTCCTGGATGGACGGCATCGCGGGCCAGATCGGGGCAGCTGACAAACCCAGGGATGTGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp CACCGCAAGCGCCTGGCACAGGTCTCTCAGGAAGAGTaGATAGACGTGCGCTTGGACCAGCGCCTCCCTGCG +
Preference number: 6 (lower is better)
Translates to: HRKRLAQVSQEE*IDVRLDQRLPA
Trigger: CGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAACTCTTCCTGAGAGACCTGTGCCAGGCGCTTGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp CCGCTGGCCCTACGCTCCCCGCCCTCACGCTTGGGGTaGCCCTCATCTGTGGATGATGTGGTAGGTAGTGTC +
Preference number: 6 (lower is better)
Translates to: PLALRSPPSRLG*PSSVDDVVGSV
Trigger: GACACTACCTACCACATCATCCACAGATGAGGGCAACCCCAAGCGTGAGGGCGGGGAGCGTAGGGCCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp TCCCAGCCCCGATCTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTaGTTGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SQPRSGLSQRAEGLL*LETAGPSMLSTSPG
Trigger: ACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 90 bp TCCCGATCCCAGCCCCGATCTGGGCTCTCCCAGCGAGCTGAAGGGTaGTTGTTGTTGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SRSQPRSGLSQRAEG*LLLETAGPSMLSTS
Trigger: GGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCTGGGATCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 90 bp GCTAAAGCCTTGATCCGAGAGCACTCAAAGAGTGAAGCCGCAGCATaGGCGGCTGCGGGAGGTTCCCGATCCCAGCCCCGATCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: AKALIREHSKSEAAA*AAAGGSRSQPRSGL
Trigger: GAGCCCAGATCGGGGCTGGGATCGGGAACCTCCCGCAGCCGCCAATGCTGCGGCTTCACTCTTTGAGTGCTCTCGGATCAAGGCTTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 90 bp TGCCGTCAGGCGGGGCAGCCTCCTCCGCTTCTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCTGAAGAACTTATGCAGCTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: CRQAGQPPPLLLNLP*KLPGIAEELMQLPR
Trigger: TCTCGGGAGCTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGAAGCGGAGGAGGCTGCCCCGCCTGACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp GCAGCTGCTCCCCCGACAGCACTTCCAGAAGCCGGGTaGGGACAAACCCGTCCCGAAGGTCTGCATACAGGT +
Preference number: 6 (lower is better)
Translates to: AAAPPTALPEAG*GQTRPEGLHTG
Trigger: ACCTGTATGCAGACCTTCGGGACGGGTTTGTCCTCACCCGGCTTCTGGAAGTGCTGTCGGGGGAGCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS TCA 72 bp GTTCCAGGCTCACCCTGCGTTCCTCGCCCAGCTCCTTaGGCGCCACATAGAGGCGATCCACTTGGGACTGTC +
Preference number: 6 (lower is better)
Translates to: VPGSPCVPRPAP*APHRGDPLGTV
Trigger: GACAGTCCCAAGTGGATCGCCTCTATGTGGCGCTCAAGGAGCTGGGCGAGGAACGCAGGGTGAGCCTGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CAGGCTGAGCAGTGGTTCCCCACCATGCGTGCCCCCTaGTGCTGGGCCTTTGGAGTCCTTGTAGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: QAEQWFPTMRAP*CWAFGVLVEAQ
Trigger: CTGGGCTTCTACAAGGACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAACCACTGCTCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CCAGCTGCTCCCCCGACAGCACTTCCAGAAGCCGGGTaGGGACAAACCCGTCCCGAAGGTCTGCATACAGGT +
Preference number: 6 (lower is better)
Translates to: PAAPPTALPEAG*GQTRPEGLHTG
Trigger: ACCTGTATGCAGACCTTCGGGACGGGTTTGTCCTCACCCGGCTTCTGGAAGTGCTGTCGGGGGAGCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS GCA 72 bp ACATCTTCGGGGTCCAGCAGACGTGCTAGCCCCAGGTaGTGCTCGGCTGTGCGGAAAGCTCTCTGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: TSSGSSRRASPR*CSAVRKALCRL
Trigger: CAACCTGCAGAGAGCTTTCCGCACAGCCGAGCAGCACCTGGGGCTAGCACGTCTGCTGGACCCCGAAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp AGAGTTGATAGACGTGCGCTTGGACCAGCGCCTCCCTaGGCTCCTCCCACAAGCCGAGCAGTTTGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: RVDRRALGPAPP*APPTSRAVCAS
Trigger: GCTGGCACAAACTGCTCGGCTTGTGGGAGGAGCGCAGGGAGGCGCTGGTCCAAGCGCACGTCTATCAACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GTGGCTTTGTGCAGGCTGAGCAGTGGTTCCCCACCATaGGTGCCCCCTGATGCTGGGCCTTTGGAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: VALCRLSSGSPP*VPPDAGPLESL
Trigger: CAAGGACTCCAAAGGCCCAGCATCAGGGGGCACGCATGGTGGGGAACCACTGCTCAGCCTGCACAAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CCACCTCAACGTCGTCGAGGGAATCGGGCACACGCATaGCCAGCAGCCACTGCTCTTTCTCCCCGATCCACA +
Preference number: 6 (lower is better)
Translates to: PPQRRRGNRAHA*PAATALSPRST
Trigger: TGTGGATCGGGGAGAAAGAGCAGTGGCTGCTGGCCATGCGTGTGCCCGATTCCCTCGACGACGTTGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp AACGCCTGGTGCCGGAGCCATCTCTTGTGCAGCTTGTaGCTGTCTTCCCGGGTGCCATCACGAGCCATCAGC +
Preference number: 6 (lower is better)
Translates to: NAWCRSHLLCSL*LSSRVPSRAIS
Trigger: GCTGATGGCTCGTGATGGCACCCGGGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCGGCACCAGGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CATCGTCCAGGTCGTGGGCCACCTGATGCAGCTCCTTaGATGCCAGCAACAAGCGGCGTCGCTCCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: HRPGRGPPDAAP*MPATSGVAPAK
Trigger: CTTTGCAGGAGCGACGCCGCTTGTTGCTGGCATCCAAGGAGCTGCATCAGGTGGCCCACGACCTGGACGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp TCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGCTGCTaGACAGCCTGCAAGCCAGTGCCTCGCTCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: SRRRPWFFLMCC*TACKPVPRSVC
Trigger: GCAGACAGAGCGAGGCACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp AAGAACTTATGCAGCTCCCGAGAGGCAGCGAGCAGCTaGGCCCGAGTGCCCATGAGTTCCAGCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: KNLCSSREAASS*ARVPMSSSSSA
Trigger: GGCTGAGCTGCTGGAACTCATGGGCACTCGGGCCCAGCTGCTCGCTGCCTCTCGGGAGCTGCATAAGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GCGCTTTTGTTGAGTAATAGAGACCGCCCCAGCTCCTaGCAGGTTGCCAGCTCAGGCACGCGCGCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: ALLLSNRDRPSS*QVASSGTRASN
Trigger: GTTGGAGGCGCGCGTGCCTGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTaGTACTTGTGCCATTGGGGGAGGCAGGGCATTGCA +
Preference number: 6 (lower is better)
Translates to: GDCWALHVVHLP*YLCHWGRQGIA
Trigger: TGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS CAA 72 bp ACACAGTACAGGCTCACCCATGACCGGTTGGACGACTaGCGGTTAGCGTCGAGCTCGCGCTTGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TQYRLTHDRLDD*RLASSSRLRSR
Trigger: CCTGCTGCGCAAGCGCGAGCTCGACGCTAACCGCAAGTCGTCCAACCGGTCATGGGTGAGCCTGTACTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp CAGCCCCGATCTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTTGTaGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGTACT +
Preference number: 6 (lower is better)
Translates to: QPRSGLSQRAEGLLL*ETAGPSMLSTSPGT
Trigger: AGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 90 bp CTGCTCCCCGTAGGCGTTGCCTTGCCGCAGCAGGCTCTCTGCAGCTaGAACCGCCACCTGCATCTTTTGCTGGTTCAGCTCCATCGTGGT +
Preference number: 6 (lower is better)
Translates to: LLPVGVALPQQALCS*NRHLHLLLVQLHRG
Trigger: ACCACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 90 bp GCGTTCCTCGCCCAGCTCCTTGAGCGCCACATAGAGGCGATCCACTaGGGACTGTCGGCGGCTGATTTGCTCACTGTCTGGGTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: AFLAQLLERHIEAIH*GLSAADLLTVWVSH
Trigger: ATGGGACACCCAGACAGTGAGCAAATCAGCCGCCGACAGTCCCAAGTGGATCGCCTCTATGTGGCGCTCAAGGAGCTGGGCGAGGAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp AGCCCTGTAGCTGGGAGAATCTCAGGGCTGCAGCATTaGGGGCCTCCACTCGCTCACTCTGGGCTGCGATGT +
Preference number: 6 (lower is better)
Translates to: SPVAGRISGLQH*GPPLAHSGLRC
Trigger: ACATCGCAGCCCAGAGTGAGCGAGTGGAGGCCCTCAATGCTGCAGCCCTGAGATTCTCCCAGCTACAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000011895.14
CDS TCA 72 bp ACCCAAGCCAGTTCATCGTCCAGGTCGTGGGCCACCTaGTGCAGCTCCTTGGATGCCAGCAACAAGCGGCGT +
Preference number: 6 (lower is better)
Translates to: TQASSSSRSWAT*CSSLDASNKRR
Trigger: ACGCCGCTTGTTGCTGGCATCCAAGGAGCTGCATCAGGTGGCCCACGACCTGGACGATGAACTGGCTTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp CGGGGCAGCCTCCTCCGCTTCTCCTCAATCTGCCCTTaGAGCTCCCGGGCATCGCTGAAGAACTTATGCAGC +
Preference number: 6 (lower is better)
Translates to: RGSLLRFSSICP*SSRASLKNLCS
Trigger: GCTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGAAGCGGAGGAGGCTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp GAGCTCAGCTCTGAGGGCCGCCTCTCGCTCATGCTCTaGCTTCTCCAGCTCACCCCACGCCTTGTCAATATC +
Preference number: 6 (lower is better)
Translates to: ELSSEGRLSLML*LLQLTPRLVNI
Trigger: GATATTGACAAGGCGTGGGGTGAGCTGGAGAAGGCAGAGCATGAGCGAGAGGCGGCCCTCAGAGCTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GGTTCTCCACCAGCAGCACCGCGCTCATCTCCTCTTTaGGCTGTTCCACCAACTCCACGATGCGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: GSPPAAPRSSPL*AVPPTPRCGST
Trigger: GGTGGAACCGCATCGTGGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCGCGGTGCTGCTGGTGGAGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CTCCCCGTAGGCGTTGCCTTGCCGCAGCAGGCTCTCTaGAGCTTGAACCGCCACCTGCATCTTTTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LPVGVALPQQAL*SLNRHLHLLLV
Trigger: AACCAGCAAAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAAGGCAACGCCTACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp GCTCCGCCCAGCACTGCCGGATCTCACCTAATTTCTTaGGCACAGAGGCTGCCAGCTCCGGTTTCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: APPSTAGSHLIS*AQRLPAPVSPA
Trigger: TGCAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAGAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp ATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTGCTaGTGGACAGCCTGCAAGCCAGTGCCTCGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: ISRRRPWFFLMC*WTACKPVPRSV
Trigger: GACAGAGCGAGGCACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp TGGATCTCCCGCCGCAGGCCCTGGTTCTTTTTGATGTaGTGCTGGACAGCCTGCAAGCCAGTGCCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: WISRRRPWFFLM*CWTACKPVPRS
Trigger: AGAGCGAGGCACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCTGCGGCGGGAGATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp CCAGTAGCGCCCGGCACTGGCGTGACAGCTGGGCGATaGTTTCCTCATAGTTCTCCACGCCCTGTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: PVAPGTGVTAGR*FPHSSPRPVPV
Trigger: AACTGGAACAGGGCGTGGAGAACTATGAGGAAAGCATCGCCCAGCTGTCACGCCAGTGCCGGGCGCTACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp CTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTTGTTaGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: LGSPSELKGCCC*RLLGPPCCPPP
Trigger: GGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CCA 72 bp CCGCCAGCCGCTCCCGCCCTGCGGTTCCTGTCTCACTaGCAAACTCTGAGAATTTCTCCTGTAGCACCGACA +
Preference number: 6 (lower is better)
Translates to: PPAAPALRFLSH*QTLRISPVAPT
Trigger: TGTCGGTGCTACAGGAGAAATTCTCAGAGTTTGCCAGTGAGACAGGAACCGCAGGGCGGGAGCGGCTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp ATGAACGCCTGGTGCCGGAGCCATCTCTTGTGCAGCTaGTGGCTGTCTTCCCGGGTGCCATCACGAGCCATC +
Preference number: 6 (lower is better)
Translates to: MNAWCRSHLLCS*WLSSRVPSRAI
Trigger: GATGGCTCGTGATGGCACCCGGGAAGACAGCCACAAGCTGCACAAGAGATGGCTCCGGCACCAGGCGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp AGCTCCGCCCAGCACTGCCGGATCTCACCTAATTTCTaGCGCACAGAGGCTGCCAGCTCCGGTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSAQHCRISPNF*RTEAASSGFSC
Trigger: GCAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAGAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp GCCCAGCTCCTTGAGCGCCACATAGAGGCGATCCACTaGGGACTGTCGGCGGCTGATTTGCTCACTGTCTGG +
Preference number: 6 (lower is better)
Translates to: AQLLERHIEAIH*GLSAADLLTVW
Trigger: CCAGACAGTGAGCAAATCAGCCGCCGACAGTCCCAAGTGGATCGCCTCTATGTGGCGCTCAAGGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp GCGGGGCAGCCTCCTCCGCTTCTCCTCAATCTGCCCTaGAAGCTCCCGGGCATCGCTGAAGAACTTATGCAG +
Preference number: 6 (lower is better)
Translates to: AGQPPPLLLNLP*KLPGIAEELMQ
Trigger: CTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGAAGCGGAGGAGGCTGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp TCCAGCACGTGGTTCTCCACCAGCAGCACCGCGCTCATCTCCTCTTaGCGCTGTTCCACCAACTCCACGATGCGGTTCCACCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SSTWFSTSSTALISS*RCSTNSTMRFHLLL
Trigger: CAACAGCAGGTGGAACCGCATCGTGGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCGCGGTGCTGCTGGTGGAGAACCACGTGCTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 90 bp GTGCTCTCCAGCTCCGCCCAGCACTGCCGGATCTCACCTAATTTCTaGCGCACAGAGGCTGCCAGCTCCGGTTTCTCCTGCATCAGTTGC +
Preference number: 6 (lower is better)
Translates to: VLSSSAQHCRISPNF*RTEAASSGFSCISC
Trigger: GCAACTGATGCAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAGAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCTGGAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp CGAGCTGAAGGGTTGTTGTTGTTGGAGACTGCTGGGCCCTCCATGTaGTCCACCTCCCCTGGTACTTGTGCCATTGGGGGAGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RAEGLLLLETAGPSM*STSPGTCAIGGGRA
Trigger: TGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS TCA 72 bp TGTCTCCTCTGGTTGATCCACGGACTCCTGGCGTTCTaGTCTTCGTCTCCGTGGCAGCTCCTCCGCACGATC +
Preference number: 6 (lower is better)
Translates to: CLLWLIHGLLAF*SSSPWQLLRTI
Trigger: GATCGTGCGGAGGAGCTGCCACGGAGACGAAGATCAGAACGCCAGGAGTCCGTGGATCAACCAGAGGAGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp GGTGCCTTTTCATCGCCTCTTCTACCGACTCCACTGTaGAAGGGAGTTCAGCGCCAGACAGCGCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: GAFSSPLLPTPL*KGVQRQTAPPP
Trigger: AGGAGGTGGCGCTGTCTGGCGCTGAACTCCCTTGCACAGTGGAGTCGGTAGAAGAGGCGATGAAAAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp TTGGCCTGTGTGGTGCTCTCCAGCTCCGCCCAGCACTaGCGGATCTCACCTAATTTCTTGCGCACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: LACVVLSSSAQH*RISPNFLRTEA
Trigger: AGCCTCTGTGCGCAAGAAATTAGGTGAGATCCGGCAGTGCTGGGCGGAGCTGGAGAGCACCACACAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS GCA 72 bp TGGGCCCTCCATGTTGTCCACCTCCCCTGGTACTTGTaGCATTGGGGGAGGCAGGGCATTGCAACACAAGGA +
Preference number: 6 (lower is better)
Translates to: WALHVVHLPWYL*HWGRQGIATQG
Trigger: TCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS CCA 72 bp CCACAGCCTTCTCGAGGCACAAAGAGGCGCCGGTTGTaGGCGCGCAGTTTGCTTTGGATGCTGAAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: PQPSRGTKRRRL*ARSLLWMLKSS
Trigger: GCTACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGTGCCTCGAGAAGGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp GACACCTCCTCCTTCCGGCTTCCCAGCTTGTCCAGCTaGGCCTGGATCTCATCAGCCATGGCGCTTTTGTTG +
Preference number: 6 (lower is better)
Translates to: DTSSFRLPSLSS*AWISSAMALLL
Trigger: CAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGCTGGACAAGCTGGGAAGCCGGAAGGAGGAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp TCTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTTGTaGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SGLSQRAEGLLL*ETAGPSMLSTS
Trigger: GGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 72 bp CGATCTGGGCTCTCCCAGCGAGCTGAAGGGTTGTTGTaGTTGGAGACTGCTGGGCCCTCCATGTTGTCCACC +
Preference number: 6 (lower is better)
Translates to: RSGLSQRAEGLL*LETAGPSMLST
Trigger: GGTGGACAACATGGAGGGCCCAGCAGTCTCCAACAACAACAACCCTTCAGCTCGCTGGGAGAGCCCAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000011895.14
ENSMUST00000152572.2
ENSMUST00000172269.2
CDS CAA 72 bp CGAGGCACAAAGAGGCGCCGGTTGTGGGCGCGCAGTTaGCTTTGGATGCTGAAGAGTAGCACCTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: RGTKRRRLWARS*LWMLKSSTSRF
Trigger: GAACCTGGAGGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGTGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp TGGTTCTCCACCAGCAGCACCGCGCTCATCTCCTCTTaGCGCTGTTCCACCAACTCCACGATGCGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: WFSTSSTALISS*RCSTNSTMRFH
Trigger: GTGGAACCGCATCGTGGAGTTGGTGGAACAGCGCAAAGAGGAGATGAGCGCGGTGCTGCTGGTGGAGAACCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp TGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGTACTaGTGCCATTGGGGGAGGCAGGGCATTGCAACACAA +
Preference number: 6 (lower is better)
Translates to: CWALHVVHLPWY*CHWGRQGIATQ
Trigger: TTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS CAA 90 bp ATATCCCAGATGCCACAGCCTTCTCGAGGCACAAAGAGGCGCCGGTaGTGGGCGCGCAGTTTGCTTTGGATGCTGAAGAGTAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: ISQMPQPSRGTKRRR*WARSLLWMLKSSTS
Trigger: GGAGGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGTGCCTCGAGAAGGCTGTGGCATCTGGGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 90 bp AGCTTGTCCAGCTGGGCCTGGATCTCATCAGCCATGGCGCTTTTGTaGAGTAATAGAGACCGCCCCAGCTCCTGGCAGGTTGCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SLSSWAWISSAMALL*SNRDRPSSWQVASS
Trigger: TGAGCTGGCAACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGCTGGACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp TCTCCTCAATCTGCCCTTGAAGCTCCCGGGCATCGCTaGAGAACTTATGCAGCTCCCGAGAGGCAGCGAGCA +
Preference number: 6 (lower is better)
Translates to: SPQSALEAPGHR*RTYAAPERQRA
Trigger: TGCTCGCTGCCTCTCGGGAGCTGCATAAGTTCTTCAGCGATGCCCGGGAGCTTCAAGGGCAGATTGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp GCTGGGCCTGGATCTCATCAGCCATGGCGCTTTTGTTaGGTAATAGAGACCGCCCCAGCTCCTGGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: AGPGSHQPWRFC*VIETAPAPGRL
Trigger: CAACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp GTAAGGGGGTGGGTGGCTGCTTACTCTGTTCTGCCTTaGGTTTCTCGATCGTGGTCAAGCGCCGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: VRGWVAAYSVLP*VSRSWSSAAES
Trigger: GCTCTCTGCGGCGCTTGACCACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp TTGCCCTCATCTGTGGATGATGTGGTAGGTAGTGTCTaGCCCCATCGGGCGATCTCGGCGTGTTCTGCCACG +
Preference number: 6 (lower is better)
Translates to: LPSSVDDVVGSV*PHRAISACSAT
Trigger: CGTGGCAGAACACGCCGAGATCGCCCGATGGGGTCAGACACTACCTACCACATCATCCACAGATGAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS TCA 72 bp ACAGACAGCCATGCACGTGGTTCACACGGTTGCAAATaGCCTGAGGGTCGCAGGGCTGGGAGAATCTCAGGG +
Preference number: 6 (lower is better)
Translates to: TDSHARGSHGCK*PEGRRAGRISG
Trigger: CCCTGAGATTCTCCCAGCCCTGCGACCCTCAGGTCATTTGCAACCGTGTGAACCACGTGCATGGCTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172269.2
CDS GCA 72 bp AGGCCCTGGTTCTTTTTGATGTGCTGCTGGACAGCCTaGAAGCCAGTGCCTCGCTCTGTCTGCATGGCCAGT +
Preference number: 6 (lower is better)
Translates to: RPWFFLMCCWTA*KPVPRSVCMAS
Trigger: ACTGGCCATGCAGACAGAGCGAGGCACTGGCTTGCAGGCTGTCCAGCAGCACATCAAAAAGAACCAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp ACAAAGAGGCGCCGGTTGTGGGCGCGCAGTTTGCTTTaGATGCTGAAGAGTAGCACCTCCAGGTTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TKRRRLWARSLL*MLKSSTSRFPF
Trigger: GAAGGGGAACCTGGAGGTGCTACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp ATGCCACAGCCTTCTCGAGGCACAAAGAGGCGCCGGTaGTGGGCGCGCAGTTTGCTTTGGATGCTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: MPQPSRGTKRRR*WARSLLWMLKS
Trigger: ACTCTTCAGCATCCAAAGCAAACTGCGCGCCCACAACCGGCGCCTCTTTGTGCCTCGAGAAGGCTGTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp TCCAGCTGGGCCTGGATCTCATCAGCCATGGCGCTTTaGTTGAGTAATAGAGACCGCCCCAGCTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSWAWISSAMAL*LSNRDRPSSWQ
Trigger: CTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp GTTGGAGACTGCTGGGCCCTCCATGTTGTCCACCTCCCCTGGTACTaGTGCCATTGGGGGAGGCAGGGCATTGCAACACAAGGAATGAAA +
Preference number: 6 (lower is better)
Translates to: VGDCWALHVVHLPWY*CHWGRQGIATQGMK
Trigger: TTTCATTCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGGGCCCAGCAGTCTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS TCA 72 bp ACAGACAGCCATGCACGTGGTTCACACGGTTGCAAATaGCCTGAGGGTCGCAGGGCTGATAGCCCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: TDSHARGSHGCK*PEGRRADSPVA
Trigger: AGCTACAGGGCTATCAGCCCTGCGACCCTCAGGTCATTTGCAACCGTGTGAACCACGTGCATGGCTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000011895.14
CDS GCA 72 bp TTCTTGCGCACAGAGGCTGCCAGCTCCGGTTTCTCCTaGATCAGTTGCTGGCCCTCCCTTTCTATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FLRTEAASSGFS*ISCWPSLSIFS
Trigger: GGAGAAGATAGAAAGGGAGGGCCAGCAACTGATGCAGGAGAAACCGGAGCTGGCAGCCTCTGTGCGCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CCA 72 bp GCAAACTTTTGGTTGCTAATGAGGTCCACAGTGCGATaGATCCAGGCCAACAGCTCCGCCGCCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ANFWLLMRSTVR*IQANSSAASSS
Trigger: TGAGGAGCTGGCGGCGGAGCTGTTGGCCTGGATCCATCGCACTGTGGACCTCATTAGCAACCAAAAGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp AGCTGGGCCTGGATCTCATCAGCCATGGCGCTTTTGTaGAGTAATAGAGACCGCCCCAGCTCCTGGCAGGTT +
Preference number: 6 (lower is better)
Translates to: SWAWISSAMALL*SNRDRPSSWQV
Trigger: AACCTGCCAGGAGCTGGGGCGGTCTCTATTACTCAACAAAAGCGCCATGGCTGATGAGATCCAGGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp AGTAAGGGGGTGGGTGGCTGCTTACTCTGTTCTGCCTaGAGTTTCTCGATCGTGGTCAAGCGCCGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SKGVGGCLLCSA*SFSIVVKRRRE
Trigger: CTCTCTGCGGCGCTTGACCACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 90 bp TTGCCGCAGCAGGCTCTCTGCAGCTTGAACCGCCACCTGCATCTTTaGCTGGTTCAGCTCCATCGTGGTGAGAAAATCCCGGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: LPQQALCSLNRHLHL*LVQLHRGEKIPVPF
Trigger: AAAAGGCACCGGGATTTTCTCACCACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTGCTGCGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CCAAAGAACTTGCGCCCCAGTAAGGGGGTGGGTGGCTaGTTACTCTGTTCTGCCTTGAGTTTCTCGATCGTG +
Preference number: 6 (lower is better)
Translates to: PKNLRPSKGVGG*LLCSALSFSIV
Trigger: CACGATCGAGAAACTCAAGGCAGAACAGAGTAAGCAGCCACCCACCCCCTTACTGGGGCGCAAGTTCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000011895.14
ENSMUST00000108362.8
ENSMUST00000108363.8
ENSMUST00000108364.8
ENSMUST00000172269.2
CDS CAA 72 bp CAGGCTCTCTGCAGCTTGAACCGCCACCTGCATCTTTaGCTGGTTCAGCTCCATCGTGGTGAGAAAATCCCG +
Preference number: 6 (lower is better)
Translates to: QALCSLNRHLHL*LVQLHRGEKIP
Trigger: CGGGATTTTCTCACCACGATGGAGCTGAACCAGCAAAAGATGCAGGTGGCGGTTCAAGCTGCAGAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp CCTCCATGTTGTCCACCTCCCCTGGTACTTGTGCCATaGGGGGAGGCAGGGCATTGCAACACAAGGAATGAA +
Preference number: 6 (lower is better)
Translates to: PPCCPPPLVLVP*GEAGHCNTRNE
Trigger: TTCATTCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS GCA 72 bp TGCTGGTTCAGCTCCATCGTGGTGAGAAAATCCCGGTaGCTTTTCATCGCCTCTTCTACCGACTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: CWFSSIVVRKSR*LFIASSTDSTV
Trigger: CACAGTGGAGTCGGTAGAAGAGGCGATGAAAAGGCACCGGGATTTTCTCACCACGATGGAGCTGAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp CTCCATGTTGTCCACCTCCCCTGGTACTTGTGCCATTaGGGGAGGCAGGGCATTGCAACACAAGGAATGAAA +
Preference number: 6 (lower is better)
Translates to: LHVVHLPWYLCH*GRQGIATQGMK
Trigger: TTTCATTCCTTGTGTTGCAATGCCCTGCCTCCCCCAATGGCACAAGTACCAGGGGAGGTGGACAACATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152572.2
CDS CAA 72 bp GCTGGGATGACCTCCTTCTACCAACTCCTGAACTGTTaGGTTCACATCCAGGACTCGGCCCATCAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: AGMTSFYQLLNC*VHIQDSAHQAV
Trigger: AACAGCCTGATGGGCCGAGTCCTGGATGTGAACCAAACAGTTCAGGAGTTGGTAGAAGGAGGTCATCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 90 bp CTCATCGGAGCTGGGATGACCTCCTTCTACCAACTCCTGAACTGTTaGGTTCACATCCAGGACTCGGCCCATCAGGCTGTTCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: LIGAGMTSFYQLLNC*VHIQDSAHQAVHFL
Trigger: CAGGAAATGAACAGCCTGATGGGCCGAGTCCTGGATGTGAACCAAACAGTTCAGGAGTTGGTAGAAGGAGGTCATCCCAGCTCCGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp AGGCTGTTCATTTCCTGGTCAAGACTTTCAAATCGATaGTGCACCACCTCAACGTCGTCGAGGGAATCGGGC +
Preference number: 6 (lower is better)
Translates to: RLFISWSRLSNR*CTTSTSSRESG
Trigger: GCCCGATTCCCTCGACGACGTTGAGGTGGTGCAGCATCGATTTGAAAGTCTTGACCAGGAAATGAACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CAA 72 bp TGCTGCACCCCACTCAGTGAGTTAGCAAACTTTTGGTaGCTAATGAGGTCCACAGTGCGATGGATCCAGGCC +
Preference number: 6 (lower is better)
Translates to: CCTPLSELANFW*LMRSTVRWIQA
Trigger: GGCCTGGATCCATCGCACTGTGGACCTCATTAGCAACCAAAAGTTTGCTAACTCACTGAGTGGGGTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS GCA 72 bp CTGTTCATTTCCTGGTCAAGACTTTCAAATCGATGCTaGACCACCTCAACGTCGTCGAGGGAATCGGGCACA +
Preference number: 6 (lower is better)
Translates to: LFISWSRLSNRC*TTSTSSRESGT
Trigger: TGTGCCCGATTCCCTCGACGACGTTGAGGTGGTGCAGCATCGATTTGAAAGTCTTGACCAGGAAATGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp TGCTGCTGCACCCCACTCAGTGAGTTAGCAAACTTTTaGTTGCTAATGAGGTCCACAGTGCGATGGATCCAG +
Preference number: 6 (lower is better)
Translates to: CCCTPLSELANF*LLMRSTVRWIQ
Trigger: CTGGATCCATCGCACTGTGGACCTCATTAGCAACCAAAAGTTTGCTAACTCACTGAGTGGGGTGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2
CDS CCA 72 bp ACATCCAGGACTCGGCCCATCAGGCTGTTCATTTCCTaGTCAAGACTTTCAAATCGATGCTGCACCACCTCA +
Preference number: 6 (lower is better)
Translates to: TSRTRPIRLFIS*SRLSNRCCTTS
Trigger: TGAGGTGGTGCAGCATCGATTTGAAAGTCTTGACCAGGAAATGAACAGCCTGATGGGCCGAGTCCTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000011895.14
ENSMUST00000172269.2