RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTBN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067889

Ensembl transcript IDs: ENSMUST00000008991.8, ENSMUST00000238976.3

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTaGCCTCAGGTCCTGCCTGCTTCAGCTCTGAGGGTCCTGGCTGAT +
Preference number: 1 (lower is better)
Translates to: GREGFSASDFIIWRS*PQVLPASALRVLAD
Trigger: ATCAGCCAGGACCCTCAGAGCTGAAGCAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CCA 90 bp GGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCATCTaGCGCTCCTGCCCTCAGGTCCTGCCTGCTTCAGCTCTGAGGGTC +
Preference number: 1 (lower is better)
Translates to: GRIGREGFSASDFII*RSCPQVLPASALRV
Trigger: GACCCTCAGAGCTGAAGCAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR TCA 90 bp CTCCTGCCCTCAGGTCCTGCCTGCTTCAGCTCTGAGGGTCCTGGCTaGTCCCAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGC +
Preference number: 1 (lower is better)
Translates to: LLPSGPACFSSEGPG*SQRQRTEWWMAHPS
Trigger: GCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTGGGATCAGCCAGGACCCTCAGAGCTGAAGCAGGCAGGACCTGAGGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CCA 90 bp GATGTGGCTACTCCTGAACAACTCACACTTGGGAGCCACCTAGAGTaGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGAT +
Preference number: 1 (lower is better)
Translates to: DVATPEQLTLGSHLE*LETSSPLSQRVRQD
Trigger: ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTGTTCAGGAGTAGCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTACAGAGGGAGGGAGCTaGCCTGGGAGTCTTGCCCCG +
Preference number: 2 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSTEGGS*PGSLAP
Trigger: CGGGGCAAGACTCCCAGGCCAGCTCCCTCCCTCTGT...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CAA 90 bp CTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTaGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGC +
Preference number: 2 (lower is better)
Translates to: LTLGSHLEWLETSSP*SQRVRQDRQGRLQR
Trigger: GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CAA 90 bp TGTGGGAACACTCTTTTGTCCCCAGTGACAGTTCCTGGTGATGGGTaGACCTTAGCAGCAGACCCTAGCAGCAGGCAGTTGTCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: CGNTLLSPVTVPGDG*TLAADPSSRQLSCQ
Trigger: TTGGCAGGACAACTGCCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGGGGACAAAAGAGTGTTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR-3UTR CCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGGTATTAGGGGTAGCCTaGGTCCCACCACCAGTTGAA +
Preference number: 2 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMVLGVA*VPPPVE
Trigger: TTCAACTGGTGGTGGGACCCAGGCTACCCCTAATAC...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR GCA 72 bp GGCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTaGCCTCAGGTCCTGCCTGCTTCAGCTCTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: GFSASDFIIWRS*PQVLPASALRV
Trigger: GACCCTCAGAGCTGAAGCAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CCA 72 bp GGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCATCTaGCGCTCCTGCCCTCAGGTCCTGCCTGCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: GREGFSASDFII*RSCPQVLPASA
Trigger: AGCTGAAGCAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR-3UTR CAA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCTGTGGGAACACTCTTTaGTCCCCAGTGACAGTTCCT +
Preference number: 3 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRCGNTL*SPVTVP
Trigger: AGGAACTGTCACTGGGGACAAAAGAGTGTTCCCACA...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CCA 72 bp ACTCCTGAACAACTCACACTTGGGAGCCACCTAGAGTaGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTG +
Preference number: 3 (lower is better)
Translates to: TPEQLTLGSHLE*LETSSPLSQRV
Trigger: CACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTGTTCAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR-3UTR CAA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGTTCCTGGTGATGGGTaGACCTTAGCAGCAGACCCT +
Preference number: 3 (lower is better)
Translates to: SCLITSLDRLKDVATPEQVPGDG*TLAADP
Trigger: AGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAAC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGGCACTCTGGTCTTCCTaGGCCAGGGCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLALWSS*ARAWAW
Trigger: CCAGGCCCAGGCCCTGGCCCAGGAAGACCAGAGTGC...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCGCTGAGGCCAGGAGGTaGTGCTGCTCCCGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRAEARR*CCSRTQ
Trigger: CTGGGTCCGGGAGCAGCAGCACCTCCTGGCCTCAGC...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGAGCTCTCTGCGGAGCTaGCACAGCCGGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLSSLRS*HSRRCS
Trigger: GGAGCACCTCCGGCTGTGCCAGCTCCGCAGAGAGCT...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCCCGCCAACTTCCGCTaGAGGGCCAGCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRPANFR*RASTPA
Trigger: AGCTGGTGTGCTGGCCCTGCAGCGGAAGTTGGCGGG...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGTGGCACAGCCGGAGGTaGTCCTGCAGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQWHSRR*SCRRSR
Trigger: GCGCGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCA...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGGCTTGGCGGGCTCCATaGAGGAAGCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLAWRAP*RKRCSS
Trigger: TGAGCTGCAGCGCTTCCTGCATGGAGCCCGCCAAGC...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCGTGGCTCAGTGCAGGTaGCAGGGCTGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRVAQCR*QGCSLL
Trigger: GAGCAGGCTGCAGCCCTGCCACCTGCACTGAGCCAC...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCGCAGCAGCCAGCACCTaGCCTCTTGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRAAAST*PLVSSS
Trigger: GCTGCTGGACACAAGAGGTCAGGTGCTGGCTGCTGC...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAGAGGCTGGCAGCCTGTaGCAGCTGCTGGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGEAGSL*QLLGSL
Trigger: GAGCGAGCCCAGCAGCTGGCACAGGCTGCCAGCCTC...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGTGCTCCCGGGAGGCGTaGAGGCGCCGGCAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRCSREA*RRRQRS
Trigger: AGAACGCTGCCGGCGCCTGCACGCCTCCCGGGAGCA...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCGGTGGAACTGGTGCTaGTCCCGGGAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELRWNWC*SREACR
Trigger: CCTGCACGCCTCCCGGGAGCAGCACCAGTTCCACCG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGAGCCGGAGGTGCTCCTaGAGGCGCTCGCGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRSRRCS*RRSRRS
Trigger: AGAGCGGCGCGAGCGCCTGCAGGAGCACCTCCGGCT...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGGGCCACAGTGGCCCGTaGAGCATGGCCCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRGHSGP*SMAPSN
Trigger: ATTGCTGGGGGCCATGCTGCACGGGCCACTGTGGCC...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGGCCTGTGCCAGCTGCTaGGCTCGCTCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRACASC*ARSSAR
Trigger: CCTGGCCGAGGAGCGAGCCCAGCAGCTGGCACAGGC...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAGGGTCAGACCCCGGCTaGCACTGGGCACCACTGGCT +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGGSDPG*HWAPLA
Trigger: AGCCAGTGGTGCCCAGTGCCAGCCGGGGTCTGACCC...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACTCGGCTGCACGGGTTaGGGCTTGGTTGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGLGCTG*GLVGSR
Trigger: CCTGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAG...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCCCGCATGGCAGCCTTaGGGTCGAAGCGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHPAWQP*GRSEQP
Trigger: TGGCTGCTCGCTTCGACCGCAAGGCTGCCATGCGGG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGGGCAGGGCTGCAGCCTaGTCCCTCAGGGCATCCAGT +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQGRAAA*SLRASS
Trigger: ACTGGATGCCCTGAGGGAGCAGGCTGCAGCCCTGCC...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATTGCAGGTGGCAGGGCTaGAGCCTGCTCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHCRWQG*SLLPQG
Trigger: GCCCTGAGGGAGCAGGCTGCAGCCCTGCCACCTGCA...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGATAGAACGCCAGGGCTaGCTCCAGGGCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRIERQG*LQGSCT
Trigger: CGTGCACGAGCCCTGGAGGCAGCCCTGGCGTTCTAT...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGCCGGCTCTCCCACATaGGACCCAGCTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHAGSPT*DPAPPS
Trigger: GCTGGGAGGAGCTGGGTCGCATGTGGGAGAGCCGGC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTTGGGCCAGGCGGCCTTaGCGGCTCTCCCACATGCGA +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGAWARRP*RLSHMR
Trigger: TCGCATGTGGGAGAGCCGGCAAGGCCGCCTGGCCCA...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCTTGTGCTGTACCCGTaGCAGGGCTTGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELLVLYP*QGLAGS
Trigger: GGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGTCTGGAAGCTGCTGCTaGTTGTGCTGTACCCGTGCC +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLSGSCC*LCCTRA
Trigger: GGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGA...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGGGGCCCTGTGCTGCCTaGCCAGGGCCTGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRGPCAA*PGPVWR
Trigger: TCTCCACACAGGCCCTGGCCAGGCAGCACAGGGCCC...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCTGCCTCGGGAAGGGTaGCTGGCCCTTCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQLPREG*LALLRR
Trigger: CCTCCGAAGAAGGGCCAGCCACCCTTCCCGAGGCAG...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGCGCCTGCAGTGTCCCTaGCATCTCCGTGTGAGACAA +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLRLQCP*HLRVRQ
Trigger: TTGTCTCACACGGAGATGCCAGGGACACTGCAGGCG...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGCTGCGGGCCTTGGCTTaGGTAGTGGTCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLLRALA*VVVSSS
Trigger: TGAACTGGAGACCACTACCCAAGCCAAGGCCCGCAG...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGACCTCCCCTGCACTCTaGTCTTCCTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQTSPAL*SSWARA
Trigger: GGCCCTGGCCCAGGAAGACCAGAGTGCAGGGGAGGT...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCGCGCTCCTGGCCAATaGTGCTGGTGTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRRAPGQ*CWCPWR
Trigger: TCTCCAAGGACACCAGCACCATTGGCCAGGAGCGCG...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTTCCACTCGGCCACAGTaGCCCGTGCAGCATGGCCCC +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSSTRPQ*PVQHGP
Trigger: GGGGCCATGCTGCACGGGCCACTGTGGCCGAGTGGA...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACTGGGGGCATGGTCATaGCCCGGGTCAGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESLGAWS*PGSDPG
Trigger: GCCGGGGTCTGACCCGGGCCATGACCATGCCCCCAG...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTGCAGGGCAGAGGCGCTaGCCGCTCGAACCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSAGQRR*PLEPSQ
Trigger: CTGAGAGGGTTCGAGCGGTCAGCGCCTCTGCCCTGC...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATGCTCCTGGGTGCCAATaGTGCGGTCCTTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHAPGCQ*CGPCLV
Trigger: CACCAGGCAAGGACCGCATCATTGGCACCCAGGAGC...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGGCTGGACCTGAGTGCTaGGGGCTTGGATGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRAGPEC*GLGCRA
Trigger: AGCACGACATCCAAGCCCTCAGCACTCAGGTCCAGC...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATCGCACCAATGGCTCCTaGCTGCACAGCCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDRTNGS*LHSQAS
Trigger: GGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCG...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCTTCAAGGGCCCTGTaGTGCCTGGCCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSSRAL*CLARAC
Trigger: ACAGGCCCTGGCCAGGCAGCACAGGGCCCTTGAAGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCTACAGCGGTCTGTGTaGGGCCTAGCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHLQRSV*GLARPG
Trigger: TCCAGGCCTGGCTAGGCCGCACACAGACCGCTGTAG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGTGCAAGAAGTGCTGCTaGTCTCGGTTGTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLCKKCC*SRLSRR
Trigger: CCTTCGGGACAACCGAGAGCAGCAGCACTTCTTGCA...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGCTCTGGACCTGCTaGTGCTGTTCCCAGAGTGCG +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRQLWTC*CCSQSA
Trigger: CGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCCAATGGCTCCTGACTaGACAGCCAGGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHPMAPD*TARPPP
Trigger: TGGCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTGCACGGGTTGAGGCTTaGTTGGCTCCAGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSARVEA*LAPGWP
Trigger: GGGCCACCCTGGAGCCAACCAAGCCTCAACCCGTGC...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATCTAGTCGCTCCCACTaGGCCTGGAGCTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGSSRSH*AWSSAA
Trigger: TGCAGCCGAGCTCCAGGCCCAGTGGGAGCGACTAGA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGGCAGGAGCTTGAGCTaGGTGCCCAGCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRGRSLS*VPSSQG
Trigger: GCCTTGGCTGCTGGGCACCCAGCTCAAGCTCCTGCC...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATCCTCCACATCCCGGTaGAACTGGTGCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGSSTSR*NWCCSR
Trigger: CCGGGAGCAGCACCAGTTCCACCGGGATGTGGAGGA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTGTGGCCCGTGCAGCATaGCCCCCAGCAATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSVARAA*PPAMSP
Trigger: TGGGCTCATTGCTGGGGGCCATGCTGCACGGGCCAC...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCCCGGGGCCGCTCCTaGGCATCCATCTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSRGRS*ASICRL
Trigger: TAACCTGCAGATGGATGCCCAGGAGCGGCCCCGGGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCTCCCCGGGGCCCACTaGACTCGTCTCCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSLPGAH*TRLLCQ
Trigger: CTGGCACAGGAGACGAGTCCAGTGGGCCCCGGGGAG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CAA 72 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTaGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSP*SQRVRQDRQGR
Trigger: CCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCACATTCTCCAGGCAGTaGATCCGCATTCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRTFSRQ*IRIRPL
Trigger: CAAGGGCCGAATGCGGATTCACTGCCTGGAGAATGT...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATGCTTGCCCAAGTCCTaGGACTGCAGTCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGCLPKS*DCSRPF
Trigger: GAAGGGCCGACTGCAGTCTCAGGACTTGGGCAAGCA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGCAGAGTCTCAGCTCCTaGCAGTCTTGCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLQSLSS*QSCKKC
Trigger: GCACTTCTTGCAAGACTGTCAGGAGCTGAGACTCTG...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTGCGCTGCCTCTCTTTaGGGTCTGCAATCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHCAASL*GLQSGA
Trigger: AGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGATGAGCTGCTTCAGATaGTCTGCTCTGGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLMSCFR*SALGHW
Trigger: CCAATGCCCCAGAGCAGATCATCTGAAGCAGCTCAT...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCACCACTGGCTCTTCTaGCTCTCCAGGGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQHHWLF*LSRGRG
Trigger: TCCTCTGCCCCTGGAGAGTCAGAAGAGCCAGTGGTG...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTGGCGGATCAGCTCTGTaGGCAGCGCTAGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSGGSAL*AALALA
Trigger: AGCGAGAGCTAGCGCTGCGCACAGAGCTGATCCGCC...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGAAGCGAGCAGCCAGTTaGTCCAGCTTCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQKRAAS*SSFSWR
Trigger: CCGCCAGGAGAAGCTGGAGCAACTGGCTGCTCGCTT...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCGGGCAGCCACCATTTaGCGTAAGAAGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRRAATI*RKKSQS
Trigger: GCTCTGGGACTTCTTACGGCAAATGGTGGCTGCCCG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCATCCCAGCGCCGGTaGAGGTCCTCCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSSQRR*RSSSFS
Trigger: AGAGAAGCTGGAGGACCTGCACCGGCGCTGGGATGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGCACAGTGCCGGCGCTaGAGGGCCTCAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESAQCRR*RASAAL
Trigger: CAATGCTGCTGAGGCCCTGCAGCGCCGGCACTGTGC...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGCCAGGTCTCCCGCATaGCAGCCTTGCGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESARSPA*QPCGRS
Trigger: GCTTCGACCGCAAGGCTGCCATGCGGGAGACCTGGC...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGATAGCTCTGCCCGGTTaGCATCAAAAAGACTGCGGG +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLIALPG*HQKDCG
Trigger: CCCGCAGTCTTTTTGATGCCAACCGGGCAGAGCTAT...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATCCAGAGAGCTGGCCATaGGAAGCCGCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDPESWP*EAAQSP
Trigger: GGGTGACTGAGCGGCTTCCCATGGCCAGCTCTCTGG...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCGGGGCTCATGGCCCTaGATCTCCTTCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRRGSWP*ISFCRV
Trigger: GACCCTGCAGAAGGAGATCCAGGGCCATGAGCCCCG...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCTCGTGTGGGCAGGGTaGCACCATGAGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELLVWAG*HHELLQ
Trigger: CTGAAGCAGCTCATGGTGCCACCCTGCCCACACGAG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTGCTGCCACCTTTGGTTaGGCTGCTCCTGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSAATFG*AAPGCQ
Trigger: TTGGCACCCAGGAGCAGCTCAACCAAAGGTGGCAGC...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATGTTGACACAAGGCCCTaGACTTCTCCTCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHVDTRP*TSPPQP
Trigger: GGGCTGTGGAGGAGAAGTTCAGGGCCTTGTGTCAAC...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGGGCAGGGTGGCACCATaGGCTGCTTCAGATGATCTG +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELGRVAP*AASDDL
Trigger: CAGATCATCTGAAGCAGCTCATGGTGCCACCCTGCC...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCACCACTCTCAGCCATaGGCTCATCTCTGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHHHSQP*AHLCLV
Trigger: GACGAGGCAGAGATGAGCTCATGGCTGAGAGTGGTG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACCAGGAGTCCGCGGATaGGCTCTCCATTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESPGVRG*ALHWRP
Trigger: TGGACGCCAATGGAGAGCGCATCCGCGGACTCCTGG...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGCCCTGGATCTCCTTCTaGAGGGTCTGGTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLPWISF*RVWFFF
Trigger: GAAGAAAAACCAGACCCTGCAGAAGGAGATCCAGGG...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATGAGCCCATTGGCCAGTaGATTGGCACTGTCTACGCG +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHEPIGQ*IGTVYA
Trigger: CGCGTAGACAGTGCCAATGCACTGGCCAATGGGCTC...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTCCATGCAGGAAGCGCTaGAGCTCATACGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGAPCRKR*SSYAAA
Trigger: GGCTGCTGCGTATGAGCTGCAGCGCTTCCTGCATGG...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGAGCTGCTGCTGCTTGTaGTGTACCCGTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRSCCCL*CTRARA
Trigger: AGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCT...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCCGTCTGGAAGCTGCTaGTGCTTGTGCTGTACCCGT +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELPSGSC*CLCCTR
Trigger: ACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATAGCTCTGCTCCAGAGTaGCCACCCTCTCTGACACCA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSSAPE*PPSLTP
Trigger: TGGTGTCAGAGAGGGTGGCCACTCTGGAGCAGAGCT...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTTGGCCAGGGCCTGTGTaGAGAACTCGTCGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSWPGPV*RTRRAL
Trigger: TAGGGCACGACGAGTTCTCCACACAGGCCCTGGCCA...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATGATGCGGTCCTTGCCTaGTGGACTGGCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDDAVLA*WTGLQQ
Trigger: CTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATC...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGGATCAGCCTGGTCTCTaGTCACCTCCTCGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRDQPGL*SPPRPR
Trigger: CCTTGGGCGAGGAGGTGACCAGAGACCAGGCTGATC...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATTCATCTGAGTGCAGCTaGGCCTGCAGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDSSECS*ACRLSS
Trigger: GCTGGAGAGCCTGCAGGCCCAGCTGCACTCAGATGA...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCATGTTCCAGAGAGCTaGCCATGGGAAGCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELHVPES*PWEAAQ
Trigger: CTGAGCGGCTTCCCATGGCCAGCTCTCTGGAACATG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCCAGCTCCTTCAGGCTaGCGTACAGCTTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQPAPSG*RTACPP
Trigger: AGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGG...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTCTGTCTACGCGCTCCTaGCCAATGGTGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGALSTRS*PMVLVS
Trigger: GGACACCAGCACCATTGGCCAGGAGCGCGTAGACAG...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATACGGCCAGTCCCGTCTaGAAGCTGCTGCTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHTASPV*KLLLLV
Trigger: CACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGT...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGGGGCAGAGGATGCAGTaGCAATGGCTGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRGQRMQ*QWLHSP
Trigger: TGGTGAATGCAGCCATTGCCACTGCATCCTCTGCCC...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGGACCCCGGCTGGCACTaGGCACCACTGGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMDPGWH*APLALL
Trigger: CAGAAGAGCCAGTGGTGCCCAGTGCCAGCCGGGGTC...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTGTGACACTGGGGGCATaGTCATGGCCCGGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSVTLGA*SWPGSD
Trigger: GTCTGACCCGGGCCATGACCATGCCCCCAGTGTCAC...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACCAGCTGTCGGTCATTaGGGGTCACGATCGTTTGCT +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGPAVGH*GSRSFA
Trigger: AGCAAACGATCGTGACCCTCAATGACCGACAGCTGG...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTCATATTCCTGGCTGCTaGGAACACCCTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGAHIPGC*EHPQPG
Trigger: GCCAGGCTGAGGGTGTTCTCAGCAGCCAGGAATATG...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGCTGCAAGCTCGGCCATaGATGCCTGGTGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRLQARP*MPGVSA
Trigger: GGCAGAAACACCAGGCATTCATGGCCGAGCTTGCAG...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCGTTCTTTCATGGGTTaGCACAAGGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRRSFMG*HKALNF
Trigger: GAAGTTCAGGGCCTTGTGTCAACCCATGAAAGAACG...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGCGCCGGGACTGTAGCTaGGACAGCTTCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRRRDCS*DSFSEI
Trigger: GATCTCAGAGAAGCTGTCTCAGCTACAGTCCCGGCG...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTGCTTCTCCAGCGCACTaGAACGCTCTTCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSASPAH*NALPRP
Trigger: TGGCCTGGGAAGAGCGTTTCAGTGCGCTGGAGAAGC...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTAGAGGCGGGCCGAACTaGTGTCATTGTCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSRGGPN*CHCPSL
Trigger: CAGACTGGGACAATGACAGCAGTTCGGCCCGCCTCT...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTAGATACCAGGCGCAGTaGATCCACCAACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGARYQAQ*IHQPGL
Trigger: GAGGCCTGGTTGGTGGATGCACTGCGCCTGGTATCT...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATGTGGAGAACTCGTCGTaGCCTACCTCGGGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDVENSS*PTSGLD
Trigger: ATCTAGCCCCGAGGTAGGGCACGACGAGTTCTCCAC...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGCCAGAGTGGGCACCCTaGCCTGTACCTCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMPEWAP*PVPPVC
Trigger: ACACACCGGAGGTACAGGGCAGGGTGCCCACTCTGG...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGCCTTTCTACCTCCCCTaGACTCTGGTCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRPFYLP*TLVFLG
Trigger: GCCCAGGAAGACCAGAGTGCAGGGGAGGTAGAAAGG...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTCCCGTCTGGAAGCTaGTGCTGCTTGTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRVPSGS*CCLCCT
Trigger: GGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGAC...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCCAGGCCTCAGCCACTaGCTGCATGTGACGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSPGLSH*LHVTAN
Trigger: ATTGGCCGTCACATGCAGGCAGTGGCTGAGGCCTGG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGTCCATCTTCTCCTaGCACTTGTCAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRQSIFS*HLSAVS
Trigger: GGAGACAGCTGACAAGTGGCAGGAGAAGATGGACTG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCTTGATGTCACTGTACTaGCCCTGGATCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRLMSLY*PWISKL
Trigger: CAGCTTGGAGATCCAGGGCCAGTACAGTGACATCAA...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTTGGTTGAGCTGCTCCTaGGTGCCAATGATGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGAWLSCS*VPMMRS
Trigger: GGACCGCATCATTGGCACCCAGGAGCAGCTCAACCA...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACGCTCAGCTCATCCTTaGCCTTTTCCTGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGRSAHP*PFPGPS
Trigger: TGATGGGCCAGGAAAAGGCCAAGGATGAGCTGAGCG...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACCTGGCCAATGGTGCTaGTGTCCTTGGAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGPGQWC*CPWRTL
Trigger: GAGAGTTCTCCAAGGACACCAGCACCATTGGCCAGG...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGTCTGCAGCTCCAGGTTaGGAAGAAGTCTCTCACGGC +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRSAAPG*EEVSHG
Trigger: GCCGTGAGAGACTTCTTCTCAACCTGGAGCTGCAGA...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATCTGGATGCTCAGGGCTaGTGTCAGAGCCGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDLDAQG*CQSRLF
Trigger: AAAAAGGCGGCTCTGACATCAGCCCTGAGCATCCAG...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTTTTGCCATAGTCATCTaGGTGCAGCTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSFAIVI*VQLGLQ
Trigger: CTGCAGGCCCAGCTGCACTCAGATGACTATGGCAAA...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGCATGGCCCCCAGCAATaGGCCCATTGGCCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMHGPQQ*AHWPVH
Trigger: ATGCACTGGCCAATGGGCTCATTGCTGGGGGCCATG...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACACTGCAGCCTCCACTaGTGCCAGTTCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESHCSLH*CQFQPK
Trigger: TTTGGGCTGGAACTGGCAGCAGTGGAGGCTGCAGTG...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGTTCATGCTTTCTCACTaGAGCCTCCACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQFMLSH*SLHCCQ
Trigger: CTGGCAGCAGTGGAGGCTGCAGTGAGAAAGCATGAA...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCGGCCCTTCATCTCTaGCATCCAGTCCATGAGGTA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSALHL*HPVHEV
Trigger: TACCTCATGGACTGGATGGCAGAGATGAAGGGCCGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGAGGCCAGGAGGTGCTaGTGCTCCCGGACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQEARRC*CSRTQA
Trigger: GGCCTGGGTCCGGGAGCAGCAGCACCTCCTGGCCTC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGGGTGGTAATTCTGGATaGTCAGGGCTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRGGNSG*SGLMSE
Trigger: CTCTGACATCAGCCCTGAGCATCCAGAATTACCACC...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAATGCTTCTTCACTTCTaGCTGGGCGCTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGMLLHF*LGAQLI
Trigger: GATGAGCTGAGCGCCCAGGCAGAAGTGAAGAAGCAT...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGACTGCAGCTGGTTCTaGACTCCACTCAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHDCSWF*TPLREL
Trigger: CAACTCCCTGAGTGGAGTCCAGAACCAGCTGCAGTC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGCCTATACTCTTTCCCTaGGTCGCAGAAACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRPILFP*VAETQG
Trigger: GCCCTGCGTTTCTGCGACCCAGGGAAAGAGTATAGG...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCATTGCCCAGGCCCTaGGTGGACTCAATGACCTTA +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSLPRP*VDSMTL
Trigger: TAAGGTCATTGAGTCCACCCAGGGCCTGGGCAATGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAAAGGCATTTGCCTCTTaGGTCAGCTCACCCACCCGG +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESKAFAS*VSSPTR
Trigger: CCGGGTGGGTGAGCTGACCCAAGAGGCAAATGCCTT...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGCACTGGGGATCAGCCTaGTCTCTGGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMHWGSA*SLVTSS
Trigger: CGAGGAGGTGACCAGAGACCAGGCTGATCCCCAGTG...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATGGAAGCCATGGGCCTaGGCCAGGCGGCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTWKPWA*ARRPCR
Trigger: CCGGCAAGGCCGCCTGGCCCAGGCCCATGGCTTCCA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGTCTCTTAAAAACCCCTaGAAGCCATGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRSLKNP*KPWAWA
Trigger: GGCCCAGGCCCATGGCTTCCAGGGGTTTTTAAGAGA...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACGAAGCTCCAGCTCATaGCTCAGGCGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGRSSSS*LRRFHI
Trigger: AATGTGGAAACGCCTGAGCCATGAGCTGGAGCTTCG...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGCATTGGCCAGTGCATTaGCACTGTCTACGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRHWPVH*HCLRAP
Trigger: AGGAGCGCGTAGACAGTGCCAATGCACTGGCCAATG...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAAGGGCAGAACAGCTTTaGGCAAATAGCTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESRAEQL*ANSSAR
Trigger: CCGGGCAGAGCTATTTGCTCAAAGCTGTTCTGCCCT...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCTGAGACAGCTTCTCTaGGATCTCCTCAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELLRQLL*DLLSSI
Trigger: TATGCTGCTGAGGAGATCTCAGAGAAGCTGTCTCAG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGTCCAAGTGCACCTTCTaGTCCTTCAGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRSKCTF*SFRNCS
Trigger: GCTGCAGTTCCTGAAGGAGCAGAAGGTGCACTTGGA...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATCCTTGCCAATTCTTTTaGCTTCCACAGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHPCQFF*LPQPGP
Trigger: AGGCCCTGGCTGTGGAAGGCAAAAGAATTGGCAAGG...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTTGCAGCCTCCACTGCTaGCAGTTCCAGCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSCSLHC*QFQPKV
Trigger: AACTTTGGGCTGGAACTGGCAGCAGTGGAGGCTGCA...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAAGCCCGTTGAGCCATTaGTCCTTCTCCTCTACCCAG +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESSPLSH*SFSSTQ
Trigger: CTGGGTAGAGGAGAAGGAGCAATGGCTCAACGGGCT...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAACTTGGTGTGCAGGTTaGGAGCTTCGTCATAGGACA +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGTWCAG*ELRHRT
Trigger: TGTCCTATGACGAAGCTCGCAACCTGCACACCAAGT...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATTTCTGCCACTTGGTGTaGAGGTTGCGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHFCHLV*RLRASS
Trigger: TGACGAAGCTCGCAACCTGCACACCAAGTGGCAGAA...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACCAGTCCTTGTTGGCTaGAAGCTCGGCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESPVLVG*KLGHEC
Trigger: GCATTCATGGCCGAGCTTGCAGCCAACAAGGACTGG...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCCAAGCCTCGGCCTCTaGAGCATCACGATAGAATTG +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRPSLGL*SITIEL
Trigger: CAATTCTATCGTGATGCTGCAGAGGCCGAGGCTTGG...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGATCATGTGTAACTCCTaGTCACCCATCCAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELIMCNS*SPIQAS
Trigger: CGAGGCTTGGATGGGTGAGCAGGAGTTACACATGAT...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACACTCGCGCCGCTCTCCTaGCAGCTCCTTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTLAPLS*QLLQAG
Trigger: GCCAGCCTGAAGGAGCTGGCAGGAGAGCGGCGCGAG...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCTACTTCGTCCACAGTaGAACCCAGTTCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQLLRPQ*NPVLHF
Trigger: GAAGTGCAGAACTGGGTTGCACTGTGGACGAAGTAG...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTCACTGTACTGGCCCTaGATCTCCAAGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHSLYWP*ISKLSK
Trigger: CTTTGACAGCTTGGAGATCCAGGGCCAGTACAGTGA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGTCTGCCTCCATGGCATaGTCTAGGACCTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQSASMA*SRTLPI
Trigger: AATTGGCAAGGTCCTAGACCATGCCATGGAGGCAGA...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGCTCCGTGAACTTGGGTaGCTTCTCCACAGTGCGATA +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRLRELG*LLHSAI
Trigger: TATCGCACTGTGGAGAAGCCACCCAAGTTCACGGAG...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCATCTCTCATCCAGGCCTaGGTCTCTGTGCACTCTAGG +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESSLIQA*VSVHSR
Trigger: CCTAGAGTGCACAGAGACCCAGGCCTGGATGAGAGA...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGGTGTTTCTGCCACTTaGTGTGCAGGTTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHGVSAT*CAGCEL
Trigger: AAGCTCGCAACCTGCACACCAAGTGGCAGAAACACC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGCCAGGGCCTGGGCCTaGGCCTGTATCGCCTCTACC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQARAWA*ACIAST
Trigger: GGTAGAGGCGATACAGGCCCAGGCCCAGGCCCTGGC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATTTCTTCACTTCTGCCTaGGCGCTCAGCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHFFTSA*ALSSSL
Trigger: CAAGGATGAGCTGAGCGCCCAGGCAGAAGTGAAGAA...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCATCGGAATTTGTCCGTaGTATCCAGTAACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRIGICP*YPVTAV
Trigger: GACAGCTGTTACTGGATACCACGGACAAATTCCGAT...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTGTGTCAGGAACTCTCTaGCCATCTACCAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSVSGTL*PSTRLP
Trigger: AGGGAGTCTGGTAGATGGCCAGAGAGTTCCTGACAC...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCCTTGGACACCAGCTaGCGTCCAGCCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPLDTS*RPASRS
Trigger: ACTCCTGGAGGCTGGACGTCAGCTGGTGTCCAAGGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATCTGGTTTTTCTTCATaGGAAGCTGGACACTGGGCA +
Preference number: 4 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGSGFSS*EAGHWA
Trigger: TGCCCAGTGTCCAGCTTCTCATGAAGAAAAACCAGA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGGCTTGTTCCAATACCTaGTGCTTCTTCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQACSNT*CFFTSA
Trigger: GGCAGAAGTGAAGAAGCATCAGGTATTGGAACAAGC...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTTGGCTGCTAGTTGTTTaGTGGTCTGGGCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGAWLLVV*WSGHSQ
Trigger: CTGACTATGCCCAGACCATCAAACAACTAGCAGCCA...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGAGGGTCACGATCGTTTaGTCAATCCACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRRVTIV*SIHCSS
Trigger: ACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCT...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGGTCTCAATGGCTTCATaGTTTCTCACTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRVSMAS*FLTAAS
Trigger: GGAGGCTGCAGTGAGAAAGCATGAAGCCATTGAGAC...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCCCGTAGGGCTGCGTaGTTGTTGAGCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPRRAA*LLSRRR
Trigger: CCTTCGCCTGCTCAACAAGCACGCAGCCCTACGGGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCTGGCCTTCAGCAGCTaGTCAGCGATGTCATTGACA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSLAFSS*SAMSLT
Trigger: TGTCAATGACATCGCTGAGCAGCTGCTGAAGGCCAG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTTCTTGCAAGAAGTGCTaGTGCTCTCGGTTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSSCKKC*CSRLSR
Trigger: TCGGGACAACCGAGAGCAGCAGCACTTCTTGCAAGA...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATAAGCTCGGCCATGAATaGCTGGTGTTTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHKLGHE*LVFLPL
Trigger: AAGTGGCAGAAACACCAGGCATTCATGGCCGAGCTT...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATCCCATTAACACTGGGTaGTTGTGTGGATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHPINTG*LCGWWQ
Trigger: TTGCCACCATCCACACAAGCACCCAGTGTTAATGGG...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATCTGCTTCAGATGATCTaGTCTGGGGCATTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHLLQMI*SGALEK
Trigger: CTTCTCCAATGCCCCAGAGCAGATCATCTGAAGCAG...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATCTTCCATCTCTTGTTTaGGGCACAGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDLPSLV*GTASLP
Trigger: TGGAAGGGATGCTGTGCCGCAAACAAGAGATGGAAG...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCATGCAGTGGCAATGGCTaGATTCACCACTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESCSGNG*IHHSQP
Trigger: TGGCTGAGAGTGGTGAATGCAGCCATTGCCACTGCA...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGAGCTGTCAAAGTCAGTaGGTGACAGAGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRSCQSQ*VTECCS
Trigger: TGAGCAGCACTCTGTCACCCACTGACTTTGACAGCT...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTTTGAAAGACTGCAGCTaGTTCTGGACTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSLKDCS*FWTPLR
Trigger: CCTGAGTGGAGTCCAGAACCAGCTGCAGTCTTTCAA...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGTCCTTGGCCTTTTCCTaGCCCATCATGTGTAACTCC +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRSLAFS*PIMCNS
Trigger: GGAGTTACACATGATGGGCCAGGAAAAGGCCAAGGA...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCATCTTGGCCCAGTTCATaGGAGGCTGCCACAACTTCA +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESSWPSS*EAATTS
Trigger: TGAAGTTGTGGCAGCCTCCCATGAACTGGGCCAAGA...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATGCCTCGTCCTTGGCCTaGAATAGGTATTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HLEWLETSSPLSQRVRQDASSLA*NRYSLP
Trigger: TGGCAAAGAATACCTATTCCAGGCCAAGGACGAGGC...ATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATTGATGGCAGGAGCTTaGGCTGGGTGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTLMAGA*AGCPAA
Trigger: GGCTGCTGGGCACCCAGCTCAAGCTCCTGCCATCAA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACTCCAAGCCGGGTGTTaGTGGCAGGAGCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPELQAGC*WQELEL
Trigger: CAGCTCAAGCTCCTGCCATCAACACCCGGCTTGGAG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTGGTCAATCATATCTTaGCTGCTGGCTGCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHWSIIS*LLAASC
Trigger: ACAACTAGCAGCCAGCAGTCAAGATATGATTGACCA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACTAGCCATGGGCTCTaGAGTAGGAGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMTSHGL*SRRLFP
Trigger: AGGAAACAGCCTCCTACTTCAGAGCCCATGGCTAGT...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGTGGCAGCTTTCTTGTTaGAGGCTTCCATCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELWQLSC*RLPSLV
Trigger: AACAAGAGATGGAAGCCTTCAACAAGAAAGCTGCCA...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACAGCTGCATCTGCCGCCTaGAGTGTCCCTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTAASAA*SVPGIS
Trigger: GGAGATGCCAGGGACACTGCAGGCGGCAGATGCAGC...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACTCCTGCACTAGCTaGCCTGGCATCCTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSHSCTS*PGILVK
Trigger: TTTTACAAGGATGCCAGGGCAGCTAGTGCAGGAGTG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCTCGCTCTCTTTCTCTaGCATCCTTGCTTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSLALFL*HPCFEA
Trigger: TGCTTCGAAGCAAGGATGGCAGAGAAAGAGAGCGAG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGGACTTCTCGTCGGGCTaGTCTACATTCACATCTTCA +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRDFSSG*STFTSS
Trigger: TGAAGATGTGAATGTAGACCAGCCCGACGAGAAGTC...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCTTGCCTGGTGGACTaGCCTTCAGCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPCLVD*PSAAAQ
Trigger: CTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGGACAAGACATATTCCTaGCTGCTGAGAACACCCTCA +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRDKTYS*LLRTPS
Trigger: TGAGGGTGTTCTCAGCAGCCAGGAATATGTCTTGTC...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAGCAATCCGGGGCTCATaGCCCTGGATCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEAIRGS*PWISFC
Trigger: GCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGC...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTTGGTGCTGGTGTCCTTaGAGAACTCTCGGAATTTGT +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSWCWCP*RTLGIC
Trigger: ACAAATTCCGAGAGTTCTCCAAGGACACCAGCACCA...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTCACTGGGTGCTTGTGTaGATGGTGGCAATTTTGACT +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSHWVLV*MVAILT
Trigger: AGTCAAAATTGCCACCATCCACACAAGCACCCAGTG...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGTCTCTGCCTCGTCCTTaGCCTGGAATAGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRSLPRP*PGIGIL
Trigger: AAGAATACCTATTCCAGGCCAAGGACGAGGCAGAGA...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTAGGATGCAGTGGCAATaGCTGCATTCACCACTCTCA +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSRMQWQ*LHSPLS
Trigger: TGAGAGTGGTGAATGCAGCCATTGCCACTGCATCCT...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCTGATGTCTTGGATCTaGAATCGGAGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSLMSWI*NRRMMV
Trigger: GACCATCATCCTCCGATTTCAGATCCAAGACATCAG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAATCAGCGACTAACTGCTaGCCTTGCTCCAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPESATNC*PCSRVS
Trigger: GCTCACCCTGGAGCAAGGTCAGCAGTTAGTCGCTGA...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACAAGGCCCCAGCCTCGCTaGGCATGGTATAGAACGCCA +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTRPQPR*AWYRTP
Trigger: TGGCGTTCTATACCATGCTCAGCGAGGCTGGGGCCT...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGTAGGGCCAGCCCGTTaGGCCATTGCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQVGPAR*AIAPSP
Trigger: AGGAGAAGGAGCAATGGCTCAACGGGCTGGCCCTAC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATCTGACACTACGACTTTaGGTTCTGGCTTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHLTLRL*VLAFQE
Trigger: CTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAG...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTTGCTCCTTCAGGAACTaGAGCGCTTTATCTACATTC +
Preference number: 4 (lower is better)
Translates to: RVVSVDSPWQFSEQREGACSFRN*SALSTF
Trigger: GAATGTAGATAAAGCGCTGCAGTTCCTGAAGGAGCA...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGTCTGGCCGGTGTTTGTaGACAATGGCATTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMSGRCL*TMALKA
Trigger: GGCCTTTAATGCCATTGTGCACAAACACCGGCCAGA...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACACTCTGGACCTGCTGCTaGTGTTCCCAGAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTLWTCC*CSQSAL
Trigger: CAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAG...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGGAATAGGTATTCTTTaGCATCCTGTAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHGIGIL*HPVSPA
Trigger: AGCTGGGCTTACAGGATGGCAAAGAATACCTATTCC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCTGCAGTCTTCATCTaGCACCACAGCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPAVFI*HHSSRA
Trigger: TGCCCTGCTGCTGTGGTGCCAGATGAAGACTGCAGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAATGCTCCAGCTTCTCCTaGCGGATCAGCTCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQCSSFS*RISSVR
Trigger: GCGCACAGAGCTGATCCGCCAGGAGAAGCTGGAGCA...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAAGAACACCCTCAGCCTaGCGAGCATCTCTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESRTPSA*RASLKN
Trigger: GTTTTTAAGAGATGCTCGCCAGGCTGAGGGTGTTCT...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCATACAGCTTGTCCACCTaGGCTTGGCGTATTGTTAGT +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESYSLST*AWRIVS
Trigger: ACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTA...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAGGTGGCAATTTTGACTaGGTCCCATCCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEGGNFD*VPSQAV
Trigger: CACTGCCTGGGATGGGACTCAGTCAAAATTGCCACC...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGGCTTCTCGCTCATCTaGCAGGGCCTTGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQGFSLI*QGLDPG
Trigger: TCCAGGATCAAGGCCCTGGCAGATGAGCGAGAAGCC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTCTGCAGATTGTAGTGTaGATTACACTTCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSLQIVV*ITLLQG
Trigger: TCCCTGAAGAAGTGTAATGCACACTACAATCTGCAG...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCAGCAGCCAGTTCTaGAGCTACAGCATCCACCGC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQLSSQF*SYSIHR
Trigger: GCGGTGGATGCTGTAGCTGCAGAACTGGCTGCTGAG...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAACCAGTTCGTGTAGCTaGAGGAGGTCCTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPETSSCS*RRSSTP
Trigger: TGGAGTGGAGGACCTCCTGCAGCTACACGAACTGGT...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGTCTGGCCTCTATCTCTaGTTTGATTCCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRSGLYL*FDSLLV
Trigger: AACCAACAAGGAATCAAAGCAGAGATAGAGGCCAGA...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAGGAGGAGAACCTGTCTaGTCTGGCCTCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEGGEPV*SGLYLC
Trigger: GCAGAGATAGAGGCCAGAGCAGACAGGTTCTCCTCC...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAGGCCTCCGCCATCCCTaGATCTCTCCCAAACACAAG +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQGLRHP*ISPKHK
Trigger: CTTGTGTTTGGGAGAGATGCAGGGATGGCGGAGGCC...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAATGGACTCGTCTCCTGTaGCAGATCCAGGTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQWTRLL*QIQVLR
Trigger: CCGAAGGACCTGGATCTGGCACAGGAGACGAGTCCA...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAGGTGTTCTGCCTCCATaGCATGGTCTAGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEGVLPP*HGLGPC
Trigger: GCAAGGTCCTAGACCATGCCATGGAGGCAGAACACC...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGTACGACTTTGAGTTCTaGCTTTTCAAGAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRYDFEF*LFKSQL
Trigger: GAGCTGACTCTTGAAAAGCCAGAACTCAAAGTCGTA...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCTGGCATCTCCGTGTaGGACAAGACATATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPGISV*DKTYSW
Trigger: CCAGGAATATGTCTTGTCTCACACGGAGATGCCAGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAATGCTGCACCGCCTCCTaGTTCTTTCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQCCTAS*FFLCLF
Trigger: GAAGAGGCACAGAAAGAATCAGGAGGCGGTGCAGCA...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATCAGAGCCGCCTTTTTaGCATCTGCCAGGGACCGAA +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTSEPPF*HLPGTE
Trigger: TTCGGTCCCTGGCAGATGGCAAAAAGGCGGCTCTGA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATTTAATGGCTGCATCTaGCGCCTGCAGTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTFNGCI*RLQCPW
Trigger: CCAGGGACACTGCAGGCGGCAGATGCAGCCATTAAA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAATCGGCCATGAATGCCTaGTGTTTCTGCCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPESAMNA*CFCHLV
Trigger: CACCAAGTGGCAGAAACACCAGGCATTCATGGCCGA...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAATGCACTTCGCACCAATaGCTCCTGACTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQCTSHQ*LLTAQP
Trigger: TGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCA...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAATACCAGACTCCCTTCTaGCTGACTAGCCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQYQTPF*LTSHGL
Trigger: GAGCCCATGGCTAGTCAGCCAGAAGGGAGTCTGGTA...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCCATGTTTTCCAAGTaGACCTTCTGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPMFSK*TFCSFR
Trigger: CCTGAAGGAGCAGAAGGTGCACTTGGAAAACATGGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAAATGCCTGGTGTTTCTaGCACTTGGTGTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPENAWCF*HLVCRL
Trigger: CAACCTGCACACCAAGTGGCAGAAACACCAGGCATT...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGTATTGTTAGTCTTGTaGTCTCTGGATGTTCATGGT +
Preference number: 4 (lower is better)
Translates to: THTWEPPRVAGNKQPLESVLLVL*SLDVHG
Trigger: ACCATGAACATCCAGAGAGCACAAGACTAACAATAC...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAATCCTGGGCATCCATCTaGAGGTTAATCCCATCCATC +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPESWASI*RLIPSI
Trigger: GATGGATGGGATTAACCTGCAGATGGATGCCCAGGA...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR GCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAAAGGCCTGGGTCTCTGTaGACTCTAGGTGGTAATTCT +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQRPGSL*TLGGNS
Trigger: AGAATTACCACCTAGAGTGCACAGAGACCCAGGCCT...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAGAGTCCGCCTTCTCTTaGATCTTCTCAGCATGGATA +
Preference number: 4 (lower is better)
Translates to: SSCLITSLDRLKDVATPEESAFS*IFSAWI
Trigger: TATCCATGCTGAGAAGATCCAAGAGAAGGCGGACTC...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATCAGATGATCTGCTCTaGGGCATTGGAGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTSDDLL*GIGEGA
Trigger: TGCTCCTTCTCCAATGCCCCAGAGCAGATCATCTGA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACACCTGTAAGCCCAGCTTaGAAACATGTTTGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LITSLDRLKDVATPEQLTPVSPA*KHVCVS
Trigger: GGAAACGCAAACATGTTTTCAAGCTGGGCTTACAGG...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
3UTR CAA 72 bp TTAAATAGCAGAAGAGAAGGTTGTGGGAACACTCTTTaGTCCCCAGTGACAGTTCCTGGTGATGGGTTGACC +
Preference number: 4 (lower is better)
Translates to: LNSRREGCGNTL*SPVTVPGDGLT
Trigger: GGTCAACCCATCACCAGGAACTGTCACTGGGGACAAAAGAGTGTTCCCACAACCTTCTCTTCTGCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR TCA 90 bp AGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTTCTGTCTCCACACTaGTGTCTTGGATCTGAAATC +
Preference number: 4 (lower is better)
Translates to: SCLITSLDRLKDVATPEQLLSPH*CLGSEI
Trigger: GATTTCAGATCCAAGACATCAGTGTGGAGACAGAAG...TTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GCCACAGGCCCCAGCCTCGCTGAGCATGGTATAGAACGCCAGGGCTaGCTCCAGGGCTCGTGCACGCTCACCGGCTCGGGCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ATGPSLAEHGIERQG*LQGSCTLTGSGLQL
Trigger: GAGCTGCAGGCCCGAGCCGGTGAGCGTGCACGAGCCCTGGAGGCAGCCCTGGCGTTCTATACCATGCTCAGCGAGGCTGGGGCCTGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CTGGCACAGCCGGAGGTGCTCCTGCAGGCGCTCGCGCCGCTCTCCTaGCAGCTCCTTCAGGCTGGCGTACAGCTTGTCCACCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LAQPEVLLQALAPLS*QLLQAGVQLVHLGL
Trigger: CAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGGAGAGCGGCGCGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp TGGGCTCGCTCCTCGGCCAGGGCTTCTAGTCGCTCCCACTGGGCCTaGAGCTCGGCTGCACGGGTTGAGGCTTGGTTGGCTCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: WARSSARASSRSHWA*SSAARVEAWLAPGW
Trigger: CCACCCTGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCCAGTGGGAGCGACTAGAAGCCCTGGCCGAGGAGCGAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp AGCTGCTGGGCTCGCTCCTCGGCCAGGGCTTCTAGTCGCTCCCACTaGGCCTGGAGCTCGGCTGCACGGGTTGAGGCTTGGTTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SCWARSSARASSRSH*AWSSAARVEAWLAP
Trigger: TGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCCAGTGGGAGCGACTAGAAGCCCTGGCCGAGGAGCGAGCCCAGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CGCTCCTGTATCCACTGTTCCAGGTCATCCAGCTCTCTGCGGAGCTaGCACAGCCGGAGGTGCTCCTGCAGGCGCTCGCGCCGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RSCIHCSRSSSSLRS*HSRRCSCRRSRRSP
Trigger: AGGAGAGCGGCGCGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCAGAGAGCTGGATGACCTGGAACAGTGGATACAGGAGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCAGGAGCCTCAGGAGGTaGCGCCCGTCCCGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRRSLRR*RPSRRS
Trigger: CGACCTGCGGGACGGGCGCAACCTCCTGAGGCTCCT...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp AGGGCCCTGTGCTGCCTGGCCAGGGCCTGTGTGGAGAACTCGTCGTaGCCTACCTCGGGGCTAGATACCAGGCGCAGTGCATCCACCAAC +
Preference number: 5 (lower is better)
Translates to: RALCCLARACVENSS*PTSGLDTRRSASTN
Trigger: GTTGGTGGATGCACTGCGCCTGGTATCTAGCCCCGAGGTAGGGCACGACGAGTTCTCCACACAGGCCCTGGCCAGGCAGCACAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp AGTGTAGGCCGGTGGGCTCGGATCTCCTCTTCAAGGGCCCTGTGCTaGCTGGCCAGGGCCTGTGTGGAGAACTCGTCGTGCCCTACCTCG +
Preference number: 5 (lower is better)
Translates to: SVGRWARISSSRALC*LARACVENSSCPTS
Trigger: CGAGGTAGGGCACGACGAGTTCTCCACACAGGCCCTGGCCAGGCAGCACAGGGCCCTTGAAGAGGAGATCCGAGCCCACCGGCCTACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CTCGCTGAGCATGGTATAGAACGCCAGGGCTGCCTCCAGGGCTCGTaGACGCTCACCGGCTCGGGCCTGCAGCTCCTCATAGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LAEHGIERQGCLQGS*TLTGSGLQLLIVLL
Trigger: GAGCAGCACTATGAGGAGCTGCAGGCCCGAGCCGGTGAGCGTGCACGAGCCCTGGAGGCAGCCCTGGCGTTCTATACCATGCTCAGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CTGTACTCGCTCTGGGCTCTCTCCACTTCTCCCCGCAGAGCTGCGTaGTGGGCTAAGAGGGCTTCTGCCTCGGGAAGGGTGGCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: LYSLWALSTSPRRAA*WAKRASASGRVAGP
Trigger: AGGGCCAGCCACCCTTCCCGAGGCAGAAGCCCTCTTAGCCCAGCACGCAGCTCTGCGGGGAGAAGTGGAGAGAGCCCAGAGCGAGTACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GCATTGAGGTCACGGCCAGTCCCGTCTGGAAGCTGCTGCTGCTTGTaGTGTACCCGTGCCAGGGCTTGGCGGGCTCCATGCAGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: ALRSRPVPSGSCCCL*CTRARAWRAPCRKR
Trigger: GCGCTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCTCAATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GCAGAGCTGCGTGCTGGGCTAAGAGGGCTTCTGCCTCGGGAAGGGTaGCTGGCCCTTCTTCGGAGGCTACAGCGGTCTGTGTGCGGCCTA +
Preference number: 5 (lower is better)
Translates to: AELRAGLRGLLPREG*LALLRRLQRSVCGL
Trigger: TAGGCCGCACACAGACCGCTGTAGCCTCCGAAGAAGGGCCAGCCACCCTTCCCGAGGCAGAAGCCCTCTTAGCCCAGCACGCAGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CTGGTCACCTCCTCGCCCAAGGTCCTGAGGCGGCTGTACTCGCTCTaGGCTCTCTCCACTTCTCCCCGCAGAGCTGCGTGCTGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: LVTSSPKVLRRLYSL*ALSTSPRRAACWAK
Trigger: CTTAGCCCAGCACGCAGCTCTGCGGGGAGAAGTGGAGAGAGCCCAGAGCGAGTACAGCCGCCTCAGGACCTTGGGCGAGGAGGTGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCGTCTGGAAGCTGCTGCTGCTTGTGCTGTACCCGTGCCAGGGCTTaGCGGGCTCCATGCAGGAAGCGCTGCAGCTCATACGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PSGSCCCLCCTRARA*RAPCRKRCSSYAAA
Trigger: GGCTGCTGCGTATGAGCTGCAGCGCTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GAAGCACGATGGAACCCTCAGGCTGTGACACTGGGGGCATGGTCATaGCCCGGGTCAGACCCCGGCTGGCACTGGGCACCACTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: EARWNPQAVTLGAWS*PGSDPGWHWAPLAL
Trigger: AAGAGCCAGTGGTGCCCAGTGCCAGCCGGGGTCTGACCCGGGCCATGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCATCGTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp TGCTTCGAAGCACGATGGAACCCTCAGGCTGTGACACTGGGGGCATaGTCATGGCCCGGGTCAGACCCCGGCTGGCACTGGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: CFEARWNPQAVTLGA*SWPGSDPGWHWAPL
Trigger: CAGTGGTGCCCAGTGCCAGCCGGGGTCTGACCCGGGCCATGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCATCGTGCTTCGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp CAGAAACGCAGGGCAGAGGCGCTGACCGCTCGAACCCTCTCAGCCTaGACCGCGATGTCCGCCTCCACCAGTTCGTGTAGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QKRRAEALTARTLSA*TAMSASTSSCSCRR
Trigger: CCTCCTGCAGCTACACGAACTGGTGGAGGCGGACATCGCGGTTCAGGCTGAGAGGGTTCGAGCGGTCAGCGCCTCTGCCCTGCGTTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GCCCCAGACGGCCACTCATCTCACCCCGTAGGGCTGCGTGCTTGTTaGGCAGGCGAAGGACACCAGTCAGGTCCCGGCCTGTATCAGCTG +
Preference number: 5 (lower is better)
Translates to: APDGHSSHPVGLRAC*AGEGHQSGPGLYQL
Trigger: CAGCTGATACAGGCCGGGACCTGACTGGTGTCCTTCGCCTGCTCAACAAGCACGCAGCCCTACGGGGTGAGATGAGTGGCCGTCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GTTGAGGCTTGGTTGGCTCCAGGGTGGCCCTCAGCGACTAACTGCTaGCCTTGCTCCAGGGTGAGCTTCAGGGGCCCCAGACGGCCACTC +
Preference number: 5 (lower is better)
Translates to: VEAWLAPGWPSATNC*PCSRVSFRGPRRPL
Trigger: GAGTGGCCGTCTGGGGCCCCTGAAGCTCACCCTGGAGCAAGGTCAGCAGTTAGTCGCTGAGGGCCACCCTGGAGCCAACCAAGCCTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp ACTGGGGATCAGCCTGGTCTCTGGTCACCTCCTCGCCCAAGGTCCTaGGGCGGCTGTACTCGCTCTGGGCTCTCTCCACTTCTCCCCGCA +
Preference number: 5 (lower is better)
Translates to: TGDQPGLWSPPRPRS*GGCTRSGLSPLLPA
Trigger: TGCGGGGAGAAGTGGAGAGAGCCCAGAGCGAGTACAGCCGCCTCAGGACCTTGGGCGAGGAGGTGACCAGAGACCAGGCTGATCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CAACTTCACGCTCCTGTATCCACTGTTCCAGGTCATCCAGCTCTCTaGGGAGCTGGCACAGCCGGAGGTGCTCCTGCAGGCGCTCGCGCC +
Preference number: 5 (lower is better)
Translates to: QLHAPVSTVPGHPAL*GAGTAGGAPAGARA
Trigger: GGCGCGAGCGCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCAGAGAGCTGGATGACCTGGAACAGTGGATACAGGAGCGTGAAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp TCAGCAGCATTGAGGTCACGGCCAGTCCCGTCTGGAAGCTGCTGCTaGTTGTGCTGTACCCGTGCCAGGGCTTGGCGGGCTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: SAALRSRPVPSGSCC*LCCTRARAWRAPCR
Trigger: CCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCTCAATGCTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CTGCTGAGAACACCCTCAGCCTGGCGAGCATCTCTTAAAAACCCCTaGAAGCCATGGGCCTGGGCCAGGCGGCCTTGCCGGCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLRTPSAWRASLKNP*KPWAWARRPCRLSH
Trigger: GTGGGAGAGCCGGCAAGGCCGCCTGGCCCAGGCCCATGGCTTCCAGGGGTTTTTAAGAGATGCTCGCCAGGCTGAGGGTGTTCTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGCTGGGCCAGGCGGCCTaGCCGGCTCTCCCACATGCG +
Preference number: 5 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRLGQAA*PALPHA
Trigger: CGCATGTGGGAGAGCCGGCAAGGCCGCCTGGCCCAG...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GGCCCTGGCCAGGCTGACAGGCACTTCTCCATGGTAGGGCACTCCTaGACTAGCTGCCCTGGCATCCTTGTAAAAGCCGAGGCTCCCACG +
Preference number: 5 (lower is better)
Translates to: GPGQADRHFSMVGHS*TSCPGILVKAEAPT
Trigger: CGTGGGAGCCTCGGCTTTTACAAGGATGCCAGGGCAGCTAGTGCAGGAGTGCCCTACCATGGAGAAGTGCCTGTCAGCCTGGCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCTGCAGCCGCCGAGCCTCACCCAGGGACTCTTCTCTCCGCCTCATaGTCGCCCGAAGATCTTCCCATCCTGCTTGTACCTCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: PAAAEPHPGTLLSAS*SPEDLPILLVPLQA
Trigger: GGCTTGGAGAGGTACAAGCAGGATGGGAAGATCTTCGGGCGACCATGAGGCGGAGAGAAGAGTCCCTGGGTGAGGCTCGGCGGCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CAGCCGGTTCCAAGGGCTTCCAGCCTCTGTCTGAGGAAGAGGCACTaGGGATCAGCCTGGTCTCTGGTCACCTCCTCGCCCAAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QPVPRASSLCLRKRH*GSAWSLVTSSPKVL
Trigger: CAGGACCTTGGGCGAGGAGGTGACCAGAGACCAGGCTGATCCCCAGTGCCTCTTCCTCAGACAGAGGCTGGAAGCCCTTGGAACCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TGCTCCCGGGAGGCGTGCAGGCGCCGGCAGCGTTCTTTCATGGGTTaGCACAAGGCCCTGAACTTCTCCTCCACAGCCCTTGAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: CSREACRRRQRSFMG*HKALNFSSTALEVL
Trigger: AAGGACCTCAAGGGCTGTGGAGGAGAAGTTCAGGGCCTTGTGTCAACCCATGAAAGAACGCTGCCGGCGCCTGCACGCCTCCCGGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp AGCTCAGCCAGCTCTGGACCTGCTGCTGCTGTTCCCAGAGTGCGCTaGCTCTCTTTGAGGTCTGCAATCCGGGGCTCATGGCCCTGGATC +
Preference number: 5 (lower is better)
Translates to: SSASSGPAAAVPRVR*LSLRSAIRGSWPWI
Trigger: GATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGCGGGTTGAGGCTTGGTaGGCTCCAGGGTGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELRVEAW*APGWPS
Trigger: TGAGGGCCACCCTGGAGCCAACCAAGCCTCAACCCG...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGGCTTCCTCCAGCCGCTaGCCCCGAAGCTCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQASSSR*PRSSSS
Trigger: TGAGCTGGAGCTTCGGGGCAAGCGGCTGGAGGAAGC...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GCTCTGGACCTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTaGGGTCTGCAATCCGGGGCTCATGGCCCTGGATCTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ALDLLLLFPECAASL*GLQSGAHGPGSPSA
Trigger: TGCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CCAGTTCGTGTAGCTGCAGGAGGTCCTCCACTCCAGCCAGGTGCTTaGCCAAGTCCTGAGACTGCAGTCGGCCCTTCATCTCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PVRVAAGGPPLQPGA*PSPETAVGPSSLPS
Trigger: GGATGGCAGAGATGAAGGGCCGACTGCAGTCTCAGGACTTGGGCAAGCACCTGGCTGGAGTGGAGGACCTCCTGCAGCTACACGAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp TTGCCATCTGCCAGGGACCGAAACTGCTGCCACCTTTGGTTGAGCTaGTCCTGGGTGCCAATGATGCGGTCCTTGCCTGGTGGACTGGCC +
Preference number: 5 (lower is better)
Translates to: LPSARDRNCCHLWLS*SWVPMMRSLPGGLA
Trigger: GGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTCAACCAAAGGTGGCAGCAGTTTCGGTCCCTGGCAGATGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp ACCTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTGAGGTCTaGAATCCGGGGCTCATGGCCCTGGATCTCCTTCTGCAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TCCCCSQSALPLFEV*NPGLMALDLLLQGL
Trigger: CAGACCCTGCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGAGCAGCAGGGCATCCTaGGCTGACTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLSSRAS*ADFFSL
Trigger: CAAGGAGAAGAAGTCAGCCAAGGATGCCCTGCTGCT...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGGAGGGTCACGATCGTTaGCTCAATCCACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLEGHDR*LNPLQQ
Trigger: CTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTC...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGGAAGCGAGCAGCCAGTaGCTCCAGCTTCTCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQEASSQ*LQLLLA
Trigger: CGCCAGGAGAAGCTGGAGCAACTGGCTGCTCGCTTC...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGAGCTCCCGCCCTTCCTaGTCCACTTTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRSSRPS*STLSSQ
Trigger: CTGGCTGGACAAAGTGGACAAGGAAGGGCGGGAGCT...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCATCTTCTCCTGCCACTaGTCAGCTGTCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRIFSCH*SAVSWR
Trigger: GCGCCAGGAGACAGCTGACAAGTGGCAGGAGAAGAT...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GGCCTCAGCCTCACCCACTTCCCAGAGGAACCTCCAGAGACGACGTaGCTCTTCCAGTCGGGCCCTTCTAGTCGCTGCCAATTCACACAG +
Preference number: 5 (lower is better)
Translates to: GLSLTHFPEEPPETT*LFQSGPSSRCQFTQ
Trigger: CTGTGTGAATTGGCAGCGACTAGAAGGGCCCGACTGGAAGAGTCACGTCGTCTCTGGAGGTTCCTCTGGGAAGTGGGTGAGGCTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TCGTCCACAGTGCAACCCAGTTCTGCACTTCGCACCAATGGCTCCTaGCTGCACAGCCAGGCCTCCGCCATCCCTGCATCTCTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SSTVQPSSALRTNGS*LHSQASAIPASLPN
Trigger: GTTTGGGAGAGATGCAGGGATGGCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTTGCACTGTGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CGGGCCTTGGCTTGGGTAGTGGTCTCCAGTTCATCCCAGCGCCGGTaGAGGTCCTCCAGCTTCTCTGACACTACGACTTTGAGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: RALAWVVVSSSSQRR*RSSSFSDTTTLSSG
Trigger: GCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCGGCGCTGGGATGAACTGGAGACCACTACCCAAGCCAAGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CAGGCTGACAGGCACTTCTCCATGGTAGGGCACTCCTGCACTAGCTaGCCTGGCATCCTTGTAAAAGCCGAGGCTCCCACGCCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: QADRHFSMVGHSCTS*PGILVKAEAPTPKY
Trigger: GTACTTCGGCGTGGGAGCCTCGGCTTTTACAAGGATGCCAGGGCAGCTAGTGCAGGAGTGCCCTACCATGGAGAAGTGCCTGTCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GCTCGAAGAGCTTCCTCCAGCCGCTTGCCCCGAAGCTCCAGCTCATaGCTCAGGCGTTTCCACATTTCTTGGAGCTCAGCCAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ARRASSSRLPRSSSS*LRRFHISWSSASSG
Trigger: TCCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGCCTGAGCCATGAGCTGGAGCTTCGGGGCAAGCGGCTGGAGGAAGCTCTTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTCGCTCCCAGGCCTTGTaGATGTCCGAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSRSQAL*MSEMSR
Trigger: CCGGCTCATCTCGGACATCAACAAGGCCTGGGAGCG...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATGCTGCCACCTTTGGTaGAGCTGCTCCTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGCCHLW*SCSWVP
Trigger: TGGCACCCAGGAGCAGCTCAACCAAAGGTGGCAGCA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGGTTGATGGCAGGAGCTaGAGCTGGGTGCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRVDGRS*SWVPSS
Trigger: GCTGCTGGGCACCCAGCTCAAGCTCCTGCCATCAAC...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATTTGTCCAGCCAGTCCTaGTTGGCTGCAAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHLSSQS*LAASSA
Trigger: GGCCGAGCTTGCAGCCAACAAGGACTGGCTGGACAA...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GCTTCAGCGCCTCCGACTTCATCATCTGGCGCTCCTGCCCTCAGGTCCTGCCTGCCTTCCTTGTCCACTTaGTCCAGCCAGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ASAPPTSSSGAPALRSCLPSLST*SSQSLL
Trigger: CAACAAGGACTGGCTGGACAAAGTGGACAAGGAAGG...CAGGCAGGACCTGAGGGCAGGAGCGCCAGATGATGAAGTCGGAGGCGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAGCGCTCAGCTCATCCTaGGCCTTTTCCTGGCCCATC +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGALSSS*AFSWPI
Trigger: GATGGGCCAGGAAAAGGCCAAGGATGAGCTGAGCGC...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGAGGCTGGCGTACAGCTaGTCCACCTGGGCTTGGCGT +
Preference number: 5 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRRLAYS*STWAWR
Trigger: ACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCT...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCCAGCAATGAGCCCATaGGCCAGTGCATTGGCACTG +
Preference number: 5 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRPAMSP*ASALAL
Trigger: CAGTGCCAATGCACTGGCCAATGGGCTCATTGCTGG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGGAAGCTGCTGCTGCTaGTGCTGTACCCGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHGSCCC*CCTRAR
Trigger: CCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TTCCAGCACACTGGCATACTGAGCAGGATTGATGAAGGCAGCTGGTaGGAGCAGGACGCCCCCAGGGTTCTGAGACCCTTCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: FQHTGILSRIDEGSW*EQDAPRVLRPFHSL
Trigger: GAGGCTGTGGAAGGGTCTCAGAACCCTGGGGGCGTCCTGCTCTCACCAGCTGCCTTCATCAATCCTGCTCAGTATGCCAGTGTGCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238976.3
CDS GCA 90 bp GCTGATGTCAGAGCCGCCTTTTTGCCATCTGCCAGGGACCGAAACTaGTGCCACCTTTGGTTGAGCTGCTCCTGGGTGCCAATGATGCGG +
Preference number: 5 (lower is better)
Translates to: ADVRAAFLPSARDRN*CHLWLSCSWVPMMR
Trigger: CCGCATCATTGGCACCCAGGAGCAGCTCAACCAAAGGTGGCAGCAGTTTCGGTCCCTGGCAGATGGCAAAAAGGCGGCTCTGACATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CCACAGTGCAACCCAGTTCTGCACTTCGCACCAATGGCTCCTGACTaGACAGCCAGGCCTCCGCCATCCCTGCATCTCTCCCAAACACAA +
Preference number: 5 (lower is better)
Translates to: PQCNPVLHFAPMAPD*TARPPPSLHLSQTQ
Trigger: TTGTGTTTGGGAGAGATGCAGGGATGGCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTTGCACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp TCGCTTGATGAGGCTCTCTACTTCGTCCACAGTGCAACCCAGTTCTaGACTTCGCACCAATGGCTCCTGACTGCACAGCCAGGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SLDEALYFVHSATQF*TSHQWLLTAQPGLR
Trigger: GCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTTGCACTGTGGACGAAGTAGAGAGCCTCATCAAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCTTTGGTTGAGCTGCTCCTGGGTGCCAATGATGCGGTCCTTGCCTaGTGGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATTGACAGC +
Preference number: 5 (lower is better)
Translates to: PLVELLLGANDAVLA*WTGLQQLLSDVIDS
Trigger: GCTGTCAATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTCAACCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp TGGAGTCCGCCTTCTCTTGGATCTTCTCAGCATGGATATTGCCCTTaGACACCAGCTGACGTCCAGCCTCCAGGAGTCCGCGGATGCGCT +
Preference number: 5 (lower is better)
Translates to: WSPPSLGSSQHGYCP*TPADVQPPGVRGCA
Trigger: AGCGCATCCGCGGACTCCTGGAGGCTGGACGTCAGCTGGTGTCCAAGGGCAATATCCATGCTGAGAAGATCCAAGAGAAGGCGGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GCATCCCTTCCATCTGTTCCTGAGCAGAGAGCTCAGGTCCTCGTGTaGGCAGGGTGGCACCATGAGCTGCTTCAGATGATCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ASLPSVPEQRAQVLV*AGWHHELLQMICSG
Trigger: CCCAGAGCAGATCATCTGAAGCAGCTCATGGTGCCACCCTGCCCACACGAGGACCTGAGCTCTCTGCTCAGGAACAGATGGAAGGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTGGTAGGGCCAGCCCGTaGAGCCATTGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSGRASP*SHCSFS
Trigger: GGAGAAGGAGCAATGGCTCAACGGGCTGGCCCTACC...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGCTCCTGACAGTCTaGCAAGAAGTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRQLLTV*QEVLLL
Trigger: GAGCAGCAGCACTTCTTGCAAGACTGTCAGGAGCTG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGTGGTGTTTCTGCCACTaGGTGTGCAGGTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRWCFCH*VCRLRA
Trigger: AGCTCGCAACCTGCACACCAAGTGGCAGAAACACCA...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATCTCCTCCACAGCCCTaGAGGTCCTTTCTACCTCCC +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGSPPQP*RSFLPP
Trigger: GGGAGGTAGAAAGGACCTCAAGGGCTGTGGAGGAGA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATCCAGCACCTGACCTCTaGTGTCCAGCAGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHPAPDL*CPAAPA
Trigger: TGCTGGAGCTGCTGGACACAAGAGGTCAGGTGCTGG...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TTCACACAGGGCCTCATAGCTCTGCTCCAGAGTGGCCACCCTCTCTaGCACCAGCTGTGGGTCACATGGCCTATACTCTTTCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: FTQGLIALLQSGHPL*HQLWVTWPILFPWV
Trigger: GACCCAGGGAAAGAGTATAGGCCATGTGACCCACAGCTGGTGTCAGAGAGGGTGGCCACTCTGGAGCAGAGCTATGAGGCCCTGTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp CCCAGCGCCGGTGCAGGTCCTCCAGCTTCTCTGACACTACGACTTTaGGTTCTGGCTTTTCAAGAGTCAGCTCCCGCCCTTCCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: PSAGAGPPASLTLRL*VLAFQESAPALPCP
Trigger: TGGACAAGGAAGGGCGGGAGCTGACTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCGGCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GGCCTTCAGCAGCTGCTCAGCGATGTCATTGACAGCAGTAACCCGTaGAGCCAGGGCGTTCATTTCAGGCTCCAGGGTCTCAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: GLQQLLSDVIDSSNP*SQGVHFRLQGLKPL
Trigger: CAGAGGTTTGAGACCCTGGAGCCTGAAATGAACGCCCTGGCTGCACGGGTTACTGCTGTCAATGACATCGCTGAGCAGCTGCTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp TCTCGATGGAGTCCGCCTTCTCTTGGATCTTCTCAGCATGGATATTaGCCTTGGACACCAGCTGACGTCCAGCCTCCAGGAGTCCGCGGA +
Preference number: 5 (lower is better)
Translates to: SRWSPPSLGSSQHGY*PWTPADVQPPGVRG
Trigger: TCCGCGGACTCCTGGAGGCTGGACGTCAGCTGGTGTCCAAGGGCAATATCCATGCTGAGAAGATCCAAGAGAAGGCGGACTCCATCGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GCGTTTCCACATTTCTTGGAGCTCAGCCAGCTCTGGACCTGCTGCTaGTGTTCCCAGAGTGCGCTGCCTCTCTTTGAGGTCTGCAATCCG +
Preference number: 5 (lower is better)
Translates to: AFPHFLELSQLWTCC*CSQSALPLFEVCNP
Trigger: CGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp AAATCTGCAGAGGACACATCCCGGGGCCGCTCCTGGGCATCCATCTaGAGGTTAATCCCATCCATCCACAGCATCAACTCTCGGACAGCC +
Preference number: 5 (lower is better)
Translates to: KSAEDTSRGRSWASI*RLIPSIHSINSRTA
Trigger: GGCTGTCCGAGAGTTGATGCTGTGGATGGATGGGATTAACCTGCAGATGGATGCCCAGGAGCGGCCCCGGGATGTGTCCTCTGCAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp TTGGTTGAGCTGCTCCTGGGTGCCAATGATGCGGTCCTTGCCTGGTaGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATTGACAGCAGT +
Preference number: 5 (lower is better)
Translates to: LVELLLGANDAVLAW*TGLQQLLSDVIDSS
Trigger: ACTGCTGTCAATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTCAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GCTGGACACTGGGCAAGTCCTTGCCATGTTCCAGAGAGCTGGCCATaGGAAGCCGCTCAGTCACCCACAATATCTCATCCTCCACATCCC +
Preference number: 5 (lower is better)
Translates to: AGHWASPCHVPESWP*EAAQSPTISHPPHP
Trigger: GGGATGTGGAGGATGAGATATTGTGGGTGACTGAGCGGCTTCCCATGGCCAGCTCTCTGGAACATGGCAAGGACTTGCCCAGTGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CTCATGGCTCAGGCGTTTCCACATTTCTTGGAGCTCAGCCAGCTCTaGACCTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LMAQAFPHFLELSQL*TCCCCSQSALPLFE
Trigger: CTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGCCTGAGCCATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCACTGGCTCTTCTGACTCTCCAGGGGCAGAGGATGCAGTGGCAATaGCTGCATTCACCACTCTCAGCCATGAGCTCATCTCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: PLALLTLQGQRMQWQ*LHSPLSAMSSSLPR
Trigger: ACGAGGCAGAGATGAGCTCATGGCTGAGAGTGGTGAATGCAGCCATTGCCACTGCATCCTCTGCCCCTGGAGAGTCAGAAGAGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCGTAGGGCTGCGTGCTaGTTGAGCAGGCGAAGGACA +
Preference number: 5 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSRRAAC*LSRRRT
Trigger: TGTCCTTCGCCTGCTCAACAAGCACGCAGCCCTACG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGCCCGTTGAGCCATaGCTCCTTCTCCTCTACCCA +
Preference number: 5 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRQPVEP*LLLLYP
Trigger: TGGGTAGAGGAGAAGGAGCAATGGCTCAACGGGCTG...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTTGCTGCTGCTCTCGGTaGTCCCGAAGGCGTCCTAAA +
Preference number: 5 (lower is better)
Translates to: RVVSVDSPWQFSEQREGACCCSR*SRRRPK
Trigger: TTTAGGACGCCTTCGGGACAACCGAGAGCAGCAGCA...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCCTGGGCTTGGCGTATaGTTAGTCTTGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSHLEWLETSSPLSQRVRPGLGV*LVLCSL
Trigger: CAGAGAGCACAAGACTAACAATACGCCAAGCCCAGG...CCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GCTGGTTCTGGACTCCACTCAGGGAGTTGGCCAGCTGTCGGTCATTaGGGGTCACGATCGTTTGCTCAATCCACTGCAGCAGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: AGSGLHSGSWPAVGH*GSRSFAQSTAAVQR
Trigger: CCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGTGGAGTCCAGAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TCTCGGTTGTCCCGAAGGCGTCCTAAAAGCTGCTGCACCGCCTCCTaGTTCTTTCTGTGCCTCTTCTCGATGGAGTCCGCCTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: SRLSRRRPKSCCTAS*FFLCLFSMESAFSW
Trigger: CCAAGAGAAGGCGGACTCCATCGAGAAGAGGCACAGAAAGAATCAGGAGGCGGTGCAGCAGCTTTTAGGACGCCTTCGGGACAACCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GGTCTCCAGTTCATCCCAGCGCCGGTGCAGGTCCTCCAGCTTCTCTaGCACTACGACTTTGAGTTCTGGCTTTTCAAGAGTCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GLQFIPAPVQVLQLL*HYDFEFWLFKSQLP
Trigger: CGGGAGCTGACTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCGGCGCTGGGATGAACTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp TCTGTAGCCTTTGGCCATCATCTTGAACTTGCTGGACCTGAGTGCTaGGGGCTTGGATGTCGTGCTCATAGGCACAGTGCCGGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: SVAFGHHLELAGPEC*GLGCRAHRHSAGAA
Trigger: TGCAGCGCCGGCACTGTGCCTATGAGCACGACATCCAAGCCCTCAGCACTCAGGTCCAGCAAGTTCAAGATGATGGCCAAAGGCTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GCAGTGTCAGGAACTCTCTGGCCATCTACCAGACTCCCTTCTGGCTaGCTAGCCATGGGCTCTGAAGTAGGAGGCTGTTTCCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: AVSGTLWPSTRLPSG*LAMGSEVGGCFLRS
Trigger: GGAACGGAGGAAACAGCCTCCTACTTCAGAGCCCATGGCTAGTCAGCCAGAAGGGAGTCTGGTAGATGGCCAGAGAGTTCCTGACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp TCATCCAGGCCTGGGTCTCTGTGCACTCTAGGTGGTAATTCTGGATaGTCAGGGCTGATGTCAGAGCCGCCTTTTTGCCATCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSRPGSLCTLGGNSG*SGLMSEPPFCHLPG
Trigger: CCCTGGCAGATGGCAAAAAGGCGGCTCTGACATCAGCCCTGAGCATCCAGAATTACCACCTAGAGTGCACAGAGACCCAGGCCTGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CAGGCGTTTCCACATTTCTTGGAGCTCAGCCAGCTCTGGACCTGCTaGTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTGAGGTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QAFPHFLELSQLWTC*CCSQSALPLFEVCN
Trigger: ATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CACTGGACTCGTCTCCTGTGCCAGATCCAGGTCCTTCGGGGACATTaGTCTGTTCAAGTCTCTGCTGTTCCAACAGGGGCTGTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: HWTRLLCQIQVLRGH*SVQVSAVPTGAVRS
Trigger: ACTCCTCACAGCCCCTGTTGGAACAGCAGAGACTTGAACAGAGCAATGTCCCCGAAGGACCTGGATCTGGCACAGGAGACGAGTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCCAGAGTGCGCTGCCTCTCTTTGAGGTCTGCAATCCGGGGCTCATaGCCCTGGATCTCCTTCTGCAGGGTCTGGTTTTTCTTCATGAGA +
Preference number: 5 (lower is better)
Translates to: PRVRCLSLRSAIRGS*PWISFCRVWFFFMR
Trigger: TCTCATGAAGAAAAACCAGACCCTGCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CGCTCTCCTGCCAGCTCCTTCAGGCTGGCGTACAGCTTGTCCACCTaGGCTTGGCGTATTGTTAGTCTTGTGCTCTCTGGATGTTCATGG +
Preference number: 5 (lower is better)
Translates to: RSPASSFRLAYSLST*AWRIVSLVLSGCSW
Trigger: CCATGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGGAGAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GCAATGAGCCCATTGGCCAGTGCATTGGCACTGTCTACGCGCTCCTaGCCAATGGTGCTGGTGTCCTTGGAGAACTCTCGGAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: AMSPLASALALSTRS*PMVLVSLENSRNLS
Trigger: GGACAAATTCCGAGAGTTCTCCAAGGACACCAGCACCATTGGCCAGGAGCGCGTAGACAGTGCCAATGCACTGGCCAATGGGCTCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGTCATCTGCCAGGGCCTaGATCCTGGACCTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TLGSHLEWLETSSPLSQRSSARA*ILDLSK
Trigger: CTTTGAGAGGTCCAGGATCAAGGCCCTGGCAGATGA...CCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCACACTGATGTCTaGGATCTGAAATCGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRLHTDV*DLKSED
Trigger: ATCCTCCGATTTCAGATCCAAGACATCAGTGTGGAG...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTAGTTCCAGCCCAAAGTaGTCCTGGGACACAAGTCGC +
Preference number: 5 (lower is better)
Translates to: RVVSVDSPWQFSEQREGASSSPK*SWDTSR
Trigger: GCGACTTGTGTCCCAGGACAACTTTGGGCTGGAACT...AGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATTCTGCAGCTCCAGGTaGAGAAGAAGTCTCTCACGG +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGFCSSR*RRSLSR
Trigger: CCGTGAGAGACTTCTTCTCAACCTGGAGCTGCAGAA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATATCTTCCCATCCTGCTaGTACCTCTCCAAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHIFPSC*YLSKPG
Trigger: ACCCGGCTTGGAGAGGTACAAGCAGGATGGGAAGAT...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGGTGGTCTCTGTCGACAGTCCCTGGCAGTTTTCTGAACAGAGGGAGGGAGCTGGGAGTCCGCCTTCTCTaGGATCTTCTCAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: GWSLSTVPGSFLNRGRELGVRLL*DLLSMD
Trigger: ATCCATGCTGAGAAGATCCAAGAGAAGGCGGACTCC...CAGCTCCCTCCCTCTGTTCAGAAAACTGCCAGGGACTGTCGACAGAGACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGCGTTTCCACATTTCTaGGAGCTCAGCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHAFPHF*ELSQLW
Trigger: CCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCACGTGCTCATAGTCTaGGCCCAGTTCATGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSHVLIV*AQFMGG
Trigger: GCCTCCCATGAACTGGGCCAAGACTATGAGCACGTG...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGATGGATGGTGGCAATTTaGACTGAGTCCCATCCCAGG +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGWMVAI*TESHPR
Trigger: CCTGGGATGGGACTCAGTCAAAATTGCCACCATCCA...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATGCTTCCATCTCTTGTTaGCGGCACAGCATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHASISC*RHSIPS
Trigger: GGAAGGGATGCTGTGCCGCAAACAAGAGATGGAAGC...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CTCAGGGAGTTGGCCAGCTGTCGGTCATTGAGGGTCACGATCGTTTaGTCAATCCACTGCAGCAGTTCAGAGGCCAGGGACTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: LRELASCRSLRVTIV*SIHCSSSEARDSYF
Trigger: GAAATACGAGTCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp CATCACGATAGAATTGCTGGGCTCGAAGAGCTTCCTCCAGCCGCTTaGCCCGAAGCTCCAGCTCATGGCTCAGGCGTTTCCACATTTCTT +
Preference number: 5 (lower is better)
Translates to: HHDRIAGLEELPPAA*PEAPAHGSGVSTFL
Trigger: AAGAAATGTGGAAACGCCTGAGCCATGAGCTGGAGCTTCGGGGCAAGCGGCTGGAGGAAGCTCTTCGAGCCCAGCAATTCTATCGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGGCCAGCTGTCGGTCATaGAGGGTCACGATCGTTTGC +
Preference number: 5 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMASCRS*RVTIVC
Trigger: GCAAACGATCGTGACCCTCAATGACCGACAGCTGGC...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATCCCGCATGGCAGCCTaGCGGTCGAAGCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTSRMAA*RSKRAA
Trigger: GGCTGCTCGCTTCGACCGCAAGGCTGCCATGCGGGA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGGAGAACTCTCGGAATTaGTCCCGAAGCATAGTCACG +
Preference number: 5 (lower is better)
Translates to: TSSPLSQRVRQDRQGRLQENSRN*SRSIVT
Trigger: CGTGACTATGCTTCGGGACAAATTCCGAGAGTTCTC...CTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAAAGGGCCTCAGCAGCATaGAGGTCACGGCCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: SSCLITSLDRLKDVATPERASAA*RSRPVP
Trigger: CGGGACTGGCCGTGACCTCAATGCTGCTGAGGCCCT...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCTTGGCAGCTTTCTTGTaGAAGGCTTCCATCTCTTGT +
Preference number: 5 (lower is better)
Translates to: SSPLSQRVRQDRQGRLQRLAAFL*KASISC
Trigger: ACAAGAGATGGAAGCCTTCAACAAGAAAGCTGCCAA...GCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp GCAGACCCCATTAACACTGGGTGCTTGTGTGGATGGTGGCAATTTTaGCTGAGTCCCATCCCAGGCAGTGTCAGGAACTCTCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: ADPINTGCLCGWWQF*LSPIPGSVRNSLAI
Trigger: GATGGCCAGAGAGTTCCTGACACTGCCTGGGATGGGACTCAGTCAAAATTGCCACCATCCACACAAGCACCCAGTGTTAATGGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GCCAGCTGTCGGTCATTGAGGGTCACGATCGTTTGCTCAATCCACTaGAGCAGTTCAGAGGCCAGGGACTCGTATTTCTCTACCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ASCRSLRVTIVCSIH*SSSEARDSYFSTRC
Trigger: ACACCTGGTAGAGAAATACGAGTCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp CCTGCCAGCTCCTTCAGGCTGGCGTACAGCTTGTCCACCTGGGCTTaGCGTATTGTTAGTCTTGTGCTCTCTGGATGTTCATGGTCAATC +
Preference number: 5 (lower is better)
Translates to: PASSFRLAYSLSTWA*RIVSLVLSGCSWSI
Trigger: GATTGACCATGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGAGACTTCTTCTCCTTGTaGTCTTCTGTCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: EWWMAHPSCGGTMTLRQGDFFSL*SSVSTL
Trigger: CAGTGTGGAGACAGAAGACAACAAGGAGAAGAAGTC...TCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCAACTGGTGGTAAAGTaGTGCACATTGACATTGGGG +
Preference number: 5 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHQLVVK*CTLTLG
Trigger: CCCCAATGTCAATGTGCACAACTTTACCACCAGTTG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACAGCTCGGCTGCACGGGTaGAGGCTTGGTTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTARLHG*RLGWLQ
Trigger: CTGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAGC...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGATGGTGCTGGTGTCCTaGGAGAACTCTCGGAATTTG +
Preference number: 5 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRMVLVS*ENSRNL
Trigger: CAAATTCCGAGAGTTCTCCAAGGACACCAGCACCAT...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp AGTCAGAGGGTGAGGCAGGATAGGCAGGGAAGGCTTCAGCGCCTCCGACTTCATCTGTTGGCAGCTTTCTaGTTGAAGGCTTCCATCTCT +
Preference number: 5 (lower is better)
Translates to: SQRVRQDRQGRLQRLRLHLLAAF*LKASIS
Trigger: AGAGATGGAAGCCTTCAACAAGAAAGCTGCCAACAG...ATGAAGTCGGAGGCGCTGAAGCCTTCCCTGCCTATCCTGCCTCACCCTCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTATCTCTGCCTCGTCCTaGGCCTGGAATAGGTATTCT +
Preference number: 5 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSISASS*AWNRYS
Trigger: AGAATACCTATTCCAGGCCAAGGACGAGGCAGAGAT...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CCAGTGACAGTTCCTGGTGATGGGTTGACCTTAGCAGCAGACCCTAGCAGCAGGCTTTCTCTGCCATCCTaGCTTCGAAGCACGATGGAA +
Preference number: 5 (lower is better)
Translates to: PVTVPGDGLTLAADPSSRLSLPS*LRSTME
Trigger: TTCCATCGTGCTTCGAAGCAAGGATGGCAGAGAAAG...CCTGCTGCTAGGGTCTGCTGCTAAGGTCAACCCATCACCAGGAACTGTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 90 bp ACCCCATTAACACTGGGTGCTTGTGTGGATGGTGGCAATTTTGACTaGGTCCCATCCCAGGCAGTGTCAGGAACTCTCTGGCCATCTACC +
Preference number: 5 (lower is better)
Translates to: TPLTLGACVDGGNFD*VPSQAVSGTLWPST
Trigger: GGTAGATGGCCAGAGAGTTCCTGACACTGCCTGGGATGGGACTCAGTCAAAATTGCCACCATCCACACAAGCACCCAGTGTTAATGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp GTCTTCCAGCTTTTTAATGGCTGCATCTGCCGCCTGCAGTGTCCCTaGCATCTCCGTGTGAGACAAGACATATTCCTGGCTGCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: VFQLFNGCICRLQCP*HLRVRQDIFLAAEN
Trigger: GTTCTCAGCAGCCAGGAATATGTCTTGTCTCACACGGAGATGCCAGGGACACTGCAGGCGGCAGATGCAGCCATTAAAAAGCTGGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CACCCTAGCTGTGGTGGCACAATGACCCTGAGGCAGGGACAATGGTTCCCACATTGGAATAGGTATTCTTaGCCATCCTGTAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HPSCGGTMTLRQGQWFPHWNRYS*PSCKPS
Trigger: GCTGGGCTTACAGGATGGCAAAGAATACCTATTCCA...ATGTGGGAACCATTGTCCCTGCCTCAGGGTCATTGTGCCACCACAGCTAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 90 bp AAAGCTGCTGCACCGCCTCCTGATTCTTTCTGTGCCTCTTCTCGATaGAGTCCGCCTTCTCTTGGATCTTCTCAGCATGGATATTGCCCT +
Preference number: 5 (lower is better)
Translates to: KAAAPPPDSFCASSR*SPPSLGSSQHGYCP
Trigger: AGGGCAATATCCATGCTGAGAAGATCCAAGAGAAGGCGGACTCCATCGAGAAGAGGCACAGAAAGAATCAGGAGGCGGTGCAGCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACAAGCCGCTCCCAGGCCTaGTTGATGTCCGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTSRSQA*LMSEMS
Trigger: GCTCATCTCGGACATCAACAAGGCCTGGGAGCGGCT...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACATCCAGCCAGTCCTTGTaGGCTGCAAGCTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTSSQSL*AASSAM
Trigger: CATGGCCGAGCTTGCAGCCAACAAGGACTGGCTGGA...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCAGAGGGTGAGGCAGGATAGGTTCTTCAGCAGAATGTaGACACTGGTGAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LEWLETSSPLSQRVRQDRFFSRM*TLVRSL
Trigger: CAAAGACCTCACCAGTGTCAACATTCTGCTGAAGAA...CCTATCCTGCCTCACCCTCTGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACACCATTGGCCAGTGCATaGGCACTGTCTACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTPLASA*ALSTRS
Trigger: GGAGCGCGTAGACAGTGCCAATGCACTGGCCAATGG...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp GGTGACAAGGTAGGAATGGGTGGTATTAGGGGTAGCCTGGGTCCCACCACCAGTATTAACACTGGGTGCTaGTGTGGATGGTGGCAATTT +
Preference number: 5 (lower is better)
Translates to: GDKVGMGGIRGSLGPTTSINTGC*CGWWQF
Trigger: AAATTGCCACCATCCACACAAGCACCCAGTGTTAAT...ACTGGTGGTGGGACCCAGGCTACCCCTAATACCACCCATTCCTACCTTGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp ACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTCATTCTGCCATGACCTGTaGGCAGCTTTCTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: THTWEPPRVAGNKQPLESFCHDL*AAFLLK
Trigger: CTTCAACAAGAAAGCTGCCAACAGGTCATGGCAGAA...TGACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 90 bp GTCCATAGTGCTCATGAAGTCTTCCAGCTTTTTAATGGCTGCATCTaGCGCCTGCAGTGTCCCTGGCATCTCCGTGTGAGACAAGACATA +
Preference number: 5 (lower is better)
Translates to: VHSAHEVFQLFNGCI*RLQCPWHLRVRQDI
Trigger: TATGTCTTGTCTCACACGGAGATGCCAGGGACACTGCAGGCGGCAGATGCAGCCATTAAAAAGCTGGAAGACTTCATGAGCACTATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAGAGGCAAAGAACTGAATGGTGGATGGCACACCCTAGCTGTGGTGGCACAATGGCTGACTTCTTCTCCTaGTTGTCTTCTGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: QRQRTEWWMAHPSCGGTMADFFS*LSSVST
Trigger: TGTGGAGACAGAAGACAACAAGGAGAAGAAGTCAGC...CATTGTGCCACCACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp CAACTCACACTTGGGAGCCACCTAGAGTGGCTGGAAACAAGCAGCCCCTTGAGTTCGTTCCAGCATCTGTaGCTTCTTCAGCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: QLTLGSHLEWLETSSPLSSFQHL*LLQQNV
Trigger: AACATTCTGCTGAAGAAGCAACAGATGCTGGAACGA...ACTCAAGGGGCTGCTTGTTTCCAGCCACTCTAGGTGGCTCCCAAGTGTGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TCGAGCTGTTTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACCTTTGGCCATCATCTaGAACTTGCTGGACCTGAGT +
Preference number: 5 (lower is better)
Translates to: SSCLITSLDRLKDVATPEPLAII*NLLDLS
Trigger: ACTCAGGTCCAGCAAGTTCAAGATGATGGCCAAAGG...TTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAAACAGCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS-3UTR CAA 90 bp TTAATCACCTCCTTGGATAGGCTCAAGGATGTGGCTACTCCTGAACAACTCACAAAGGCTTCGTGTCGCTaGATGAGGCTCTCTACTTCG +
Preference number: 5 (lower is better)
Translates to: LITSLDRLKDVATPEQLTKASCR*MRLSTS
Trigger: CGAAGTAGAGAGCCTCATCAAGCGACACGAAGCCTT...TGTGAGTTGTTCAGGAGTAGCCACATCCTTGAGCCTATCCAAGGAGGTGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CCGGAGGTGCTCCTGCAGGCGCTCGCGCCGCTCTCCTaGCAGCTCCTTCAGGCTGGCGTACAGCTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: PEVLLQALAPLS*QLLQAGVQLVH
Trigger: GTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGGAGAGCGGCGCGAGCGCCTGCAGGAGCACCTCCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCTCGCTCCTCGGCCAGGGCTTCTAGTCGCTCCCACTaGGCCTGGAGCTCGGCTGCACGGGTTGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: ARSSARASSRSH*AWSSAARVEAW
Trigger: CCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCCAGTGGGAGCGACTAGAAGCCCTGGCCGAGGAGCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TGGAACCCTCAGGCTGTGACACTGGGGGCATGGTCATaGCCCGGGTCAGACCCCGGCTGGCACTGGGCACCA +
Preference number: 6 (lower is better)
Translates to: WNPQAVTLGAWS*PGSDPGWHWAP
Trigger: TGGTGCCCAGTGCCAGCCGGGGTCTGACCCGGGCCATGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCACGATGGAACCCTCAGGCTGTGACACTGGGGGCATaGTCATGGCCCGGGTCAGACCCCGGCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: ARWNPQAVTLGA*SWPGSDPGWHW
Trigger: CCAGTGCCAGCCGGGGTCTGACCCGGGCCATGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCATCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CGGTGGGCTCGGATCTCCTCTTCAAGGGCCCTGTGCTaGCTGGCCAGGGCCTGTGTGGAGAACTCGTCGTGC +
Preference number: 6 (lower is better)
Translates to: RWARISSSRALC*LARACVENSSC
Trigger: GCACGACGAGTTCTCCACACAGGCCCTGGCCAGGCAGCACAGGGCCCTTGAAGAGGAGATCCGAGCCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GGGCCTGGAGCTCGGCTGCACGGGTTGAGGCTTGGTTaGCTCCAGGGTGGCCCTCAGCGACTAACTGCTGAC +
Preference number: 6 (lower is better)
Translates to: GPGARLHGLRLG*LQGGPQRLTAD
Trigger: GTCAGCAGTTAGTCGCTGAGGGCCACCCTGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CACTGGGCCTGGAGCTCGGCTGCACGGGTTGAGGCTTaGTTGGCTCCAGGGTGGCCCTCAGCGACTAACTGC +
Preference number: 6 (lower is better)
Translates to: HWAWSSAARVEA*LAPGWPSATNC
Trigger: GCAGTTAGTCGCTGAGGGCCACCCTGGAGCCAACCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TCCTCGGCCAGGGCTTCTAGTCGCTCCCACTGGGCCTaGAGCTCGGCTGCACGGGTTGAGGCTTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: SSARASSRSHWA*SSAARVEAWLA
Trigger: AGCCAACCAAGCCTCAACCCGTGCAGCCGAGCTCCAGGCCCAGTGGGAGCGACTAGAAGCCCTGGCCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCAGCCTGCTCCCTCAGGGCATCCAGTGTAGGCCGGTaGGCTCGGATCTCCTCTTCAAGGGCCCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AACSLRASSVGR*ARISSSRALCC
Trigger: GCAGCACAGGGCCCTTGAAGAGGAGATCCGAGCCCACCGGCCTACACTGGATGCCCTGAGGGAGCAGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TCCTCGCCCAAGGTCCTGAGGCGGCTGTACTCGCTCTaGGCTCTCTCCACTTCTCCCCGCAGAGCTGCGTGC +
Preference number: 6 (lower is better)
Translates to: SSPKVLRRLYSL*ALSTSPRRAAC
Trigger: GCACGCAGCTCTGCGGGGAGAAGTGGAGAGAGCCCAGAGCGAGTACAGCCGCCTCAGGACCTTGGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AGGTCACGGCCAGTCCCGTCTGGAAGCTGCTGCTGCTaGTGCTGTACCCGTGCCAGGGCTTGGCGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: RSRPVPSGSCCC*CCTRARAWRAP
Trigger: TGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp CCCGTCTGGAAGCTGCTGCTGCTTGTGCTGTACCCGTGCCAGGGCTaGGCGGGCTCCATGCAGGAAGCGCTGCAGCTCATACGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PVWKLLLLVLYPCQG*AGSMQEALQLIRSS
Trigger: GCTGCTGCGTATGAGCTGCAGCGCTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp AGGGCAGAGGCGCTGACCGCTCGAACCCTCTCAGCCTaGACCGCGATGTCCGCCTCCACCAGTTCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: RAEALTARTLSA*TAMSASTSSCS
Trigger: GCTACACGAACTGGTGGAGGCGGACATCGCGGTTCAGGCTGAGAGGGTTCGAGCGGTCAGCGCCTCTGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp CCAGGTCCTCCAGGCGCTCAGGTAGGGCCAGCCCGTTaGGCCATTGCTCCTTCTCCTCTACCCAGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: PGPPGAQVGPAR*AIAPSPLPRGH
Trigger: GTGGCCTCTGGGTAGAGGAGAAGGAGCAATGGCTCAACGGGCTGGCCCTACCTGAGCGCCTGGAGGACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp TGCTGCCTGGCCAGGGCCTGTGTGGAGAACTCGTCGTaGCCTACCTCGGGGCTAGATACCAGGCGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: CCLARACVENSS*PTSGLDTRRSA
Trigger: TGCACTGCGCCTGGTATCTAGCCCCGAGGTAGGGCACGACGAGTTCTCCACACAGGCCCTGGCCAGGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CATGGTATAGAACGCCAGGGCTGCCTCCAGGGCTCGTaGACGCTCACCGGCTCGGGCCTGCAGCTCCTCATA +
Preference number: 6 (lower is better)
Translates to: HGIERQGCLQGS*TLTGSGLQLLI
Trigger: TATGAGGAGCTGCAGGCCCGAGCCGGTGAGCGTGCACGAGCCCTGGAGGCAGCCCTGGCGTTCTATACCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CTCTGGGCTCTCTCCACTTCTCCCCGCAGAGCTGCGTaGTGGGCTAAGAGGGCTTCTGCCTCGGGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: LWALSTSPRRAA*WAKRASASGRV
Trigger: CACCCTTCCCGAGGCAGAAGCCCTCTTAGCCCAGCACGCAGCTCTGCGGGGAGAAGTGGAGAGAGCCCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp TTGAGGTCACGGCCAGTCCCGTCTGGAAGCTGCTGCTaGTTGTGCTGTACCCGTGCCAGGGCTTGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: LRSRPVPSGSCC*LCCTRARAWRA
Trigger: AGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GGGCTCGGATCTCCTCTTCAAGGGCCCTGTGCTGCCTaGCCAGGGCCTGTGTGGAGAACTCGTCGTGCCCTA +
Preference number: 6 (lower is better)
Translates to: GLGSPLQGPCAA*PGPVWRTRRAL
Trigger: TAGGGCACGACGAGTTCTCCACACAGGCCCTGGCCAGGCAGCACAGGGCCCTTGAAGAGGAGATCCGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CGTGCTGGGCTAAGAGGGCTTCTGCCTCGGGAAGGGTaGCTGGCCCTTCTTCGGAGGCTACAGCGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: RAGLRGLLPREG*LALLRRLQRSV
Trigger: CACAGACCGCTGTAGCCTCCGAAGAAGGGCCAGCCACCCTTCCCGAGGCAGAAGCCCTCTTAGCCCAGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TGGGCTCTCTCCACTTCTCCCCGCAGAGCTGCGTGCTaGGCTAAGAGGGCTTCTGCCTCGGGAAGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WALSTSPRRAAC*AKRASASGRVA
Trigger: AGCCACCCTTCCCGAGGCAGAAGCCCTCTTAGCCCAGCACGCAGCTCTGCGGGGAGAAGTGGAGAGAGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp ACACCCTCAGCCTGGCGAGCATCTCTTAAAAACCCCTaGAAGCCATGGGCCTGGGCCAGGCGGCCTTGCCGG +
Preference number: 6 (lower is better)
Translates to: TPSAWRASLKNP*KPWAWARRPCR
Trigger: CCGGCAAGGCCGCCTGGCCCAGGCCCATGGCTTCCAGGGGTTTTTAAGAGATGCTCGCCAGGCTGAGGGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp GGCCCCAGACGGCCACTCATCTCACCCCGTAGGGCTGCGTGCTTGTaGAGCAGGCGAAGGACACCAGTCAGGTCCCGGCCTGTATCAGCT +
Preference number: 6 (lower is better)
Translates to: GPRRPLISPRRAACL*SRRRTPVRSRPVSA
Trigger: AGCTGATACAGGCCGGGACCTGACTGGTGTCCTTCGCCTGCTCAACAAGCACGCAGCCCTACGGGGTGAGATGAGTGGCCGTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp GCAGCATTGAGGTCACGGCCAGTCCCGTCTGGAAGCTGCTGCTGCTaGTGCTGTACCCGTGCCAGGGCTTGGCGGGCTCCATGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: AALRSRPVPSGSCCC*CCTRARAWRAPCRK
Trigger: CTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCTCAATGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp CAGCCTGGTCTCTGGTCACCTCCTCGCCCAAGGTCCTaGGGCGGCTGTACTCGCTCTGGGCTCTCTCCACTT +
Preference number: 6 (lower is better)
Translates to: QPGLWSPPRPRS*GGCTRSGLSPL
Trigger: AAGTGGAGAGAGCCCAGAGCGAGTACAGCCGCCTCAGGACCTTGGGCGAGGAGGTGACCAGAGACCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CCCAGACGGCCACTCATCTCACCCCGTAGGGCTGCGTaGTTGTTGAGCAGGCGAAGGACACCAGTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: PRRPLISPRRAA*LLSRRRTPVRS
Trigger: GGACCTGACTGGTGTCCTTCGCCTGCTCAACAAGCACGCAGCCCTACGGGGTGAGATGAGTGGCCGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GCTCCTGTATCCACTGTTCCAGGTCATCCAGCTCTCTaGGGAGCTGGCACAGCCGGAGGTGCTCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: APVSTVPGHPAL*GAGTAGGAPAG
Trigger: GCCTGCAGGAGCACCTCCGGCTGTGCCAGCTCCGCAGAGAGCTGGATGACCTGGAACAGTGGATACAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp AGCTGCTGCTGCTTGTGCTGTACCCGTGCCAGGGCTTaGCGGGCTCCATGCAGGAAGCGCTGCAGCTCATAC +
Preference number: 6 (lower is better)
Translates to: SCCCLCCTRARA*RAPCRKRCSSY
Trigger: GTATGAGCTGCAGCGCTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GGCCTCAGCAGCATTGAGGTCACGGCCAGTCCCGTCTaGAAGCTGCTGCTGCTTGTGCTGTACCCGTGCCAG +
Preference number: 6 (lower is better)
Translates to: GLSSIEVTASPV*KLLLLVLYPCQ
Trigger: CTGGCACGGGTACAGCACAAGCAGCAGCAGCTTCCAGACGGGACTGGCCGTGACCTCAATGCTGCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AGACGGCCACTCATCTCACCCCGTAGGGCTGCGTGCTaGTTGAGCAGGCGAAGGACACCAGTCAGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: RRPLISPRRAAC*LSRRRTPVRSR
Trigger: CCGGGACCTGACTGGTGTCCTTCGCCTGCTCAACAAGCACGCAGCCCTACGGGGTGAGATGAGTGGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CAGGCCTGGAAGTCATCCAAGCTGCGCAGGAAATCCTaGAGCCGCCGAGCCTCACCCAGGGACTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: QAWKSSKLRRKS*SRRASPRDSSL
Trigger: GAGAGAAGAGTCCCTGGGTGAGGCTCGGCGGCTGCAGGATTTCCTGCGCAGCTTGGATGACTTCCAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CACCAGCTGTGGGTCACATGGCCTATACTCTTTCCCTaGGTCGCAGAAACGCAGGGCAGAGGCGCTGACCGC +
Preference number: 6 (lower is better)
Translates to: HQLWVTWPILFP*VAETQGRGADR
Trigger: GCGGTCAGCGCCTCTGCCCTGCGTTTCTGCGACCCAGGGAAAGAGTATAGGCCATGTGACCCACAGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GAGCTGCTCCTGGGTGCCAATGATGCGGTCCTTGCCTaGTGGACTGGCCTTCAGCAGCTGCTCAGCGATGTC +
Preference number: 6 (lower is better)
Translates to: ELLLGANDAVLA*WTGLQQLLSDV
Trigger: GACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCCCGGTTGGCATCAAAAAGACTGCGGGCCTTGGCTTaGGTAGTGGTCTCCAGTTCATCCCAGCGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: ARLASKRLRALA*VVVSSSSQRRC
Trigger: GCACCGGCGCTGGGATGAACTGGAGACCACTACCCAAGCCAAGGCCCGCAGTCTTTTTGATGCCAACCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TGGTTGAGCTGCTCCTGGGTGCCAATGATGCGGTCCTaGCCTGGTGGACTGGCCTTCAGCAGCTGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: WLSCSWVPMMRS*PGGLAFSSCSA
Trigger: CGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTCAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp GGAGGCGTGCAGGCGCCGGCAGCGTTCTTTCATGGGTaGACACAAGGCCCTGAACTTCTCCTCCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: GGVQAPAAFFHG*TQGPELLLHSP
Trigger: AGGGCTGTGGAGGAGAAGTTCAGGGCCTTGTGTCAACCCATGAAAGAACGCTGCCGGCGCCTGCACGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CCTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTaGAGGTCTGCAATCCGGGGCTCATGGCCCTGGATC +
Preference number: 6 (lower is better)
Translates to: PAAAVPRVRCLS*RSAIRGSWPWI
Trigger: GATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AAGCTGCTGCTGCTTGTGCTGTACCCGTGCCAGGGCTaGGCGGGCTCCATGCAGGAAGCGCTGCAGCTCATA +
Preference number: 6 (lower is better)
Translates to: KLLLLVLYPCQG*AGSMQEALQLI
Trigger: TATGAGCTGCAGCGCTTCCTGCATGGAGCCCGCCAAGCCCTGGCACGGGTACAGCACAAGCAGCAGCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp GGCAGGAGCTTGAGCTGGGTGCCCAGCAGCCAAGGCATTTGCCTCTaGGGTCAGCTCACCCACCCGGGCAGAGATAGCTTCCAGATCTCT +
Preference number: 6 (lower is better)
Translates to: GRSLSWVPSSQGICL*GQLTHPGRDSFQIS
Trigger: AGAGATCTGGAAGCTATCTCTGCCCGGGTGGGTGAGCTGACCCAAGAGGCAAATGCCTTGGCTGCTGGGCACCCAGCTCAAGCTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp AGCTCTGGACCTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTaGAGGTCTGCAATCCGGGGCTCATGGCCCTGGATCTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SSGPAAAVPRVRCLS*RSAIRGSWPWISFC
Trigger: GCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp CTGCTCACCCATCCAAGCCTCGGCCTCTGCAGCATCACGATAGAATaGCTGGGCTCGAAGAGCTTCCTCCAGCCGCTTGCCCCGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LLTHPSLGLCSITIE*LGSKSFLQPLAPKL
Trigger: GAGCTTCGGGGCAAGCGGCTGGAGGAAGCTCTTCGAGCCCAGCAATTCTATCGTGATGCTGCAGAGGCCGAGGCTTGGATGGGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp CGCTCGCGCCGCTCTCCTGCCAGCTCCTTCAGGCTGGCGTACAGCTaGTCCACCTGGGCTTGGCGTATTGTTAGTCTTGTGCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RSRRSPASSFRLAYS*STWAWRIVSLVLSG
Trigger: TCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGGAGAGCGGCGCGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GAGGCGTGCAGGCGCCGGCAGCGTTCTTTCATGGGTTaGCACAAGGCCCTGAACTTCTCCTCCACAGCCCTT +
Preference number: 6 (lower is better)
Translates to: EACRRRQRSFMG*HKALNFSSTAL
Trigger: AAGGGCTGTGGAGGAGAAGTTCAGGGCCTTGTGTCAACCCATGAAAGAACGCTGCCGGCGCCTGCACGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp CTGCTGCTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTaGGGTCTGCAATCCGGGGCTCATGGCCCTGGATCT +
Preference number: 6 (lower is better)
Translates to: LLLLFPECAASL*GLQSGAHGPGS
Trigger: AGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GTGCAACCCAGTTCTGCACTTCGCACCAATGGCTCCTaGCTGCACAGCCAGGCCTCCGCCATCCCTGCATCT +
Preference number: 6 (lower is better)
Translates to: VQPSSALRTNGS*LHSQASAIPAS
Trigger: AGATGCAGGGATGGCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp ATCCTTGCTTCGAAGCACGATGGAACCCTCAGGCTGTaGCACTGGGGGCATGGTCATGGCCCGGGTCAGACC +
Preference number: 6 (lower is better)
Translates to: ILASKHDGTLRL*HWGHGHGPGQT
Trigger: GGTCTGACCCGGGCCATGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCATCGTGCTTCGAAGCAAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AGCTCTGGACCTGCTGCTGCTGTTCCCAGAGTGCGCTaGCTCTCTTTGAGGTCTGCAATCCGGGGCTCATGG +
Preference number: 6 (lower is better)
Translates to: SSGPAAAVPRVR*LSLRSAIRGSW
Trigger: CCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AGAATTGCTGGGCTCGAAGAGCTTCCTCCAGCCGCTTaGCCCGAAGCTCCAGCTCATGGCTCAGGCGTTTCC +
Preference number: 6 (lower is better)
Translates to: RIAGLEELPPAA*PEAPAHGSGVS
Trigger: GGAAACGCCTGAGCCATGAGCTGGAGCTTCGGGGCAAGCGGCTGGAGGAAGCTCTTCGAGCCCAGCAATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AACCCAGTTCTGCACTTCGCACCAATGGCTCCTGACTaGACAGCCAGGCCTCCGCCATCCCTGCATCTCTCC +
Preference number: 6 (lower is better)
Translates to: NPVLHFAPMAPD*TARPPPSLHLS
Trigger: GGAGAGATGCAGGGATGGCGGAGGCCTGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCTTCCTCCAGCCGCTTGCCCCGAAGCTCCAGCTCATaGCTCAGGCGTTTCCACATTTCTTGGAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ASSSRLPRSSSS*LRRFHISWSSA
Trigger: GGCTGAGCTCCAAGAAATGTGGAAACGCCTGAGCCATGAGCTGGAGCTTCGGGGCAAGCGGCTGGAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp CTCACCCACTTCCCAGAGGAACCTCCAGAGACGACGTaGCTCTTCCAGTCGGGCCCTTCTAGTCGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: LTHFPEEPPETT*LFQSGPSSRCQ
Trigger: TTGGCAGCGACTAGAAGGGCCCGACTGGAAGAGTCACGTCGTCTCTGGAGGTTCCTCTGGGAAGTGGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp TGTACCTCTCCAAGCCGGGTGTTGATGGCAGGAGCTTaGGCTGGGTGCCCAGCAGCCAAGGCATTTGCCTCT +
Preference number: 6 (lower is better)
Translates to: CTSPSRVLMAGA*AGCPAAKAFAS
Trigger: AGAGGCAAATGCCTTGGCTGCTGGGCACCCAGCTCAAGCTCCTGCCATCAACACCCGGCTTGGAGAGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GTCGTGCCCTACCTCGGGGCTAGATACCAGGCGCAGTaGATCCACCAACCAGGCCTCCATGTCATTTGCATC +
Preference number: 6 (lower is better)
Translates to: VVPYLGARYQAQ*IHQPGLHVICI
Trigger: GATGCAAATGACATGGAGGCCTGGTTGGTGGATGCACTGCGCCTGGTATCTAGCCCCGAGGTAGGGCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AGAGCCGCCTTTTTGCCATCTGCCAGGGACCGAAACTaGTGCCACCTTTGGTTGAGCTGCTCCTGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: RAAFLPSARDRN*CHLWLSCSWVP
Trigger: TGGCACCCAGGAGCAGCTCAACCAAAGGTGGCAGCAGTTTCGGTCCCTGGCAGATGGCAAAAAGGCGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp TGCTGTTCCCAGAGTGCGCTGCCTCTCTTTGAGGTCTaGAATCCGGGGCTCATGGCCCTGGATCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: CCSQSALPLFEV*NPGLMALDLLL
Trigger: CAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCGCACTCTGGGAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AGGCACTTCTCCATGGTAGGGCACTCCTGCACTAGCTaGCCTGGCATCCTTGTAAAAGCCGAGGCTCCCACG +
Preference number: 6 (lower is better)
Translates to: RHFSMVGHSCTS*PGILVKAEAPT
Trigger: CGTGGGAGCCTCGGCTTTTACAAGGATGCCAGGGCAGCTAGTGCAGGAGTGCCCTACCATGGAGAAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CTGCTCCTGGGTGCCAATGATGCGGTCCTTGCCTGGTaGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATT +
Preference number: 6 (lower is better)
Translates to: LLLGANDAVLAW*TGLQQLLSDVI
Trigger: AATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CCATTGGCCAGTGCATTGGCACTGTCTACGCGCTCCTaGCCAATGGTGCTGGTGTCCTTGGAGAACTCTCGG +
Preference number: 6 (lower is better)
Translates to: PLASALALSTRS*PMVLVSLENSR
Trigger: CCGAGAGTTCTCCAAGGACACCAGCACCATTGGCCAGGAGCGCGTAGACAGTGCCAATGCACTGGCCAATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AGCTCTGCCCGGTTGGCATCAAAAAGACTGCGGGCCTaGGCTTGGGTAGTGGTCTCCAGTTCATCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: SSARLASKRLRA*AWVVVSSSSQR
Trigger: GCGCTGGGATGAACTGGAGACCACTACCCAAGCCAAGGCCCGCAGTCTTTTTGATGCCAACCGGGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CATCCAAGCCTCGGCCTCTGCAGCATCACGATAGAATaGCTGGGCTCGAAGAGCTTCCTCCAGCCGCTTGCC +
Preference number: 6 (lower is better)
Translates to: HPSLGLCSITIE*LGSKSFLQPLA
Trigger: GGCAAGCGGCTGGAGGAAGCTCTTCGAGCCCAGCAATTCTATCGTGATGCTGCAGAGGCCGAGGCTTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp TCCTTGCCTGGTGGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATaGACAGCAGTAACCCGTGCAGCCAGGGCGTTCATTTCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SLPGGLAFSSCSAMS*TAVTRAARAFISGS
Trigger: GGAGCCTGAAATGAACGCCCTGGCTGCACGGGTTACTGCTGTCAATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp TGCCACCTTTGGTTGAGCTGCTCCTGGGTGCCAATGATGCGGTCCTaGCCTGGTGGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATTG +
Preference number: 6 (lower is better)
Translates to: CHLWLSCSWVPMMRS*PGGLAFSSCSAMSL
Trigger: CAATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACCAGGCAAGGACCGCATCATTGGCACCCAGGAGCAGCTCAACCAAAGGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp CTTGCCCCGAAGCTCCAGCTCATGGCTCAGGCGTTTCCACATTTCTaGGAGCTCAGCCAGCTCTGGACCTGCTGCTGCTGTTCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: LAPKLQLMAQAFPHF*ELSQLWTCCCCSQS
Trigger: ACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTCCAAGAAATGTGGAAACGCCTGAGCCATGAGCTGGAGCTTCGGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp CCACTGGACTCGTCTCCTGTGCCAGATCCAGGTCCTTCGGGGACATaGCTCTGTTCAAGTCTCTGCTGTTCCAACAGGGGCTGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: PLDSSPVPDPGPSGT*LCSSLCCSNRGCEE
Trigger: CTCCTCACAGCCCCTGTTGGAACAGCAGAGACTTGAACAGAGCAATGTCCCCGAAGGACCTGGATCTGGCACAGGAGACGAGTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp ACTGGCATACTGAGCAGGATTGATGAAGGCAGCTGGTaGGAGCAGGACGCCCCCAGGGTTCTGAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: TGILSRIDEGSW*EQDAPRVLRPF
Trigger: GAAGGGTCTCAGAACCCTGGGGGCGTCCTGCTCTCACCAGCTGCCTTCATCAATCCTGCTCAGTATGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238976.3
CDS GCA 72 bp TTGAGAAGAAGTCTCTCACGGCGGGCAGCCACCATTTaGCGTAAGAAGTCCCAGAGCCGGGCCACGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LRRSLSRRAATI*RKKSQSRATLF
Trigger: GAACAACGTGGCCCGGCTCTGGGACTTCTTACGGCAAATGGTGGCTGCCCGCCGTGAGAGACTTCTTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CAGCTGCTCAGCGATGTCATTGACAGCAGTAACCCGTaGAGCCAGGGCGTTCATTTCAGGCTCCAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: QLLSDVIDSSNP*SQGVHFRLQGL
Trigger: GAGACCCTGGAGCCTGAAATGAACGCCCTGGCTGCACGGGTTACTGCTGTCAATGACATCGCTGAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GCTTGGGTAGTGGTCTCCAGTTCATCCCAGCGCCGGTaGAGGTCCTCCAGCTTCTCTGACACTACGACTTTG +
Preference number: 6 (lower is better)
Translates to: AWVVVSSSSQRR*RSSSFSDTTTL
Trigger: CAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCGGCGCTGGGATGAACTGGAGACCACTACCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CCACATTTCTTGGAGCTCAGCCAGCTCTGGACCTGCTaGTGCTGTTCCCAGAGTGCGCTGCCTCTCTTTGAG +
Preference number: 6 (lower is better)
Translates to: PHFLELSQLWTC*CCSQSALPLFE
Trigger: CTCAAAGAGAGGCAGCGCACTCTGGGAACAGCAGCAGCAGGTCCAGAGCTGGCTGAGCTCCAAGAAATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CAGGCTGACAGGCACTTCTCCATGGTAGGGCACTCCTaGACTAGCTGCCCTGGCATCCTTGTAAAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: QADRHFSMVGHS*TSCPGILVKAE
Trigger: CTCGGCTTTTACAAGGATGCCAGGGCAGCTAGTGCAGGAGTGCCCTACCATGGAGAAGTGCCTGTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CGCTGCCTCTCTTTGAGGTCTGCAATCCGGGGCTCATaGCCCTGGATCTCCTTCTGCAGGGTCTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: RCLSLRSAIRGS*PWISFCRVWFF
Trigger: GAAAAACCAGACCCTGCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAGGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CCATCTGTTCCTGAGCAGAGAGCTCAGGTCCTCGTGTaGGCAGGGTGGCACCATGAGCTGCTTCAGATGATC +
Preference number: 6 (lower is better)
Translates to: PSVPEQRAQVLV*AGWHHELLQMI
Trigger: GATCATCTGAAGCAGCTCATGGTGCCACCCTGCCCACACGAGGACCTGAGCTCTCTGCTCAGGAACAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp GGTGGACTGGCCTTCAGCAGCTGCTCAGCGATGTCATaGACAGCAGTAACCCGTGCAGCCAGGGCGTTCATT +
Preference number: 6 (lower is better)
Translates to: GGLAFSSCSAMS*TAVTRAARAFI
Trigger: AATGAACGCCCTGGCTGCACGGGTTACTGCTGTCAATGACATCGCTGAGCAGCTGCTGAAGGCCAGTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CGTCCAGCCTCCAGGAGTCCGCGGATGCGCTCTCCATaGGCGTCCATAGTGCTCATGAAGTCTTCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: RPASRSPRMRSP*ASIVLMKSSSF
Trigger: AAAGCTGGAAGACTTCATGAGCACTATGGACGCCAATGGAGAGCGCATCCGCGGACTCCTGGAGGCTGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CGCTCTCCTGCCAGCTCCTTCAGGCTGGCGTACAGCTaGTCCACCTGGGCTTGGCGTATTGTTAGTCTTGTG +
Preference number: 6 (lower is better)
Translates to: RSPASSFRLAYS*STWAWRIVSLV
Trigger: CACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGCAGGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GGACTCCACTCAGGGAGTTGGCCAGCTGTCGGTCATTaGGGGTCACGATCGTTTGCTCAATCCACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: GLHSGSWPAVGH*GSRSFAQSTAA
Trigger: TGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGTGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GGCCTCATAGCTCTGCTCCAGAGTGGCCACCCTCTCTaGCACCAGCTGTGGGTCACATGGCCTATACTCTTT +
Preference number: 6 (lower is better)
Translates to: GLIALLQSGHPL*HQLWVTWPILF
Trigger: AAAGAGTATAGGCCATGTGACCCACAGCTGGTGTCAGAGAGGGTGGCCACTCTGGAGCAGAGCTATGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp TACCAGACTCCCTTCTGGCTGACTAGCCATGGGCTCTaGAGTAGGAGGCTGTTTCCTCCGTTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: YQTPFWLTSHGL*SRRLFPPFLLL
Trigger: GAGGAGGAGGAACGGAGGAAACAGCCTCCTACTTCAGAGCCCATGGCTAGTCAGCCAGAAGGGAGTCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp TTGGCCAGCTGTCGGTCATTGAGGGTCACGATCGTTTaGTCAATCCACTGCAGCAGTTCAGAGGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LASCRSLRVTIV*SIHCSSSEARD
Trigger: GTCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp TCCTTGGCCTTTTCCTGGCCCATCATGTGTAACTCCTaGTCACCCATCCAAGCCTCGGCCTCTGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: SLAFSWPIMCNS*SPIQASASAAS
Trigger: TGATGCTGCAGAGGCCGAGGCTTGGATGGGTGAGCAGGAGTTACACATGATGGGCCAGGAAAAGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GAGGCTCTCTACTTCGTCCACAGTGCAACCCAGTTCTaGACTTCGCACCAATGGCTCCTGACTGCACAGCCA +
Preference number: 6 (lower is better)
Translates to: EALYFVHSATQF*TSHQWLLTAQP
Trigger: TGGCTGTGCAGTCAGGAGCCATTGGTGCGAAGTGCAGAACTGGGTTGCACTGTGGACGAAGTAGAGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CGTCTCCTGTGCCAGATCCAGGTCCTTCGGGGACATTaGTCTGTTCAAGTCTCTGCTGTTCCAACAGGGGCT +
Preference number: 6 (lower is better)
Translates to: RLLCQIQVLRGH*SVQVSAVPTGA
Trigger: AGCCCCTGTTGGAACAGCAGAGACTTGAACAGAGCAATGTCCCCGAAGGACCTGGATCTGGCACAGGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCCAGCTCCTTCAGGCTGGCGTACAGCTTGTCCACCTaGGCTTGGCGTATTGTTAGTCTTGTGCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: ASSFRLAYSLST*AWRIVSLVLSG
Trigger: TCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGCTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp ACTAAATCTGCAGAGGACACATCCCGGGGCCGCTCCTaGGCATCCATCTGCAGGTTAATCCCATCCATCCAC +
Preference number: 6 (lower is better)
Translates to: TKSAEDTSRGRS*ASICRLIPSIH
Trigger: GTGGATGGATGGGATTAACCTGCAGATGGATGCCCAGGAGCGGCCCCGGGATGTGTCCTCTGCAGATTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCTCTCTTTCTCTGCCATCCTTGCTTCGAAGCACGATaGAACCCTCAGGCTGTGACACTGGGGGCATGGTCA +
Preference number: 6 (lower is better)
Translates to: ALFLCHPCFEAR*NPQAVTLGAWS
Trigger: TGACCATGCCCCCAGTGTCACAGCCTGAGGGTTCCATCGTGCTTCGAAGCAAGGATGGCAGAGAAAGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp GTTGGCCAGCTGTCGGTCATTGAGGGTCACGATCGTTaGCTCAATCCACTGCAGCAGTTCAGAGGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: VGQLSVIEGHDR*LNPLQQFRGQG
Trigger: TCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TGGACTCCACTCAGGGAGTTGGCCAGCTGTCGGTCATaGAGGGTCACGATCGTTTGCTCAATCCACTGCAGC +
Preference number: 6 (lower is better)
Translates to: WTPLRELASCRS*RVTIVCSIHCS
Trigger: GCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGTGGAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TTTTCAAGAGTCAGCTCCCGCCCTTCCTTGTCCACTTaGTCCAGCCAGTCCTTGTTGGCTGCAAGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: FSRVSSRPSLST*SSQSLLAASSA
Trigger: GGCCGAGCTTGCAGCCAACAAGGACTGGCTGGACAAAGTGGACAAGGAAGGGCGGGAGCTGACTCTTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp ATCATCTTGAACTTGCTGGACCTGAGTGCTGAGGGCTaGGATGTCGTGCTCATAGGCACAGTGCCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: IILNLLDLSAEG*DVVLIGTVPAL
Trigger: CAGCGCCGGCACTGTGCCTATGAGCACGACATCCAAGCCCTCAGCACTCAGGTCCAGCAAGTTCAAGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TCGTCTCCTGTGCCAGATCCAGGTCCTTCGGGGACATaGCTCTGTTCAAGTCTCTGCTGTTCCAACAGGGGC +
Preference number: 6 (lower is better)
Translates to: SSPVPDPGPSGT*LCSSLCCSNRG
Trigger: GCCCCTGTTGGAACAGCAGAGACTTGAACAGAGCAATGTCCCCGAAGGACCTGGATCTGGCACAGGAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp AGCTGGTTCTGGACTCCACTCAGGGAGTTGGCCAGCTGTCGGTCATaGAGGGTCACGATCGTTTGCTCAATCCACTGCAGCAGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: SWFWTPLRELASCRS*RVTIVCSIHCSSSE
Trigger: CTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGTGGAGTCCAGAACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GGAACTCTCTGGCCATCTACCAGACTCCCTTCTGGCTaGCTAGCCATGGGCTCTGAAGTAGGAGGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GTLWPSTRLPSG*LAMGSEVGGCF
Trigger: GAAACAGCCTCCTACTTCAGAGCCCATGGCTAGTCAGCCAGAAGGGAGTCTGGTAGATGGCCAGAGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GCTCTGTTCAAGTCTCTGCTGTTCCAACAGGGGCTGTaGGGAGTCGGTGTCCGTGCAGACCCCATTAACACT +
Preference number: 6 (lower is better)
Translates to: ALFKSLLFQQGL*GVGVRADPINT
Trigger: AGTGTTAATGGGGTCTGCACGGACACCGACTCCTCACAGCCCCTGTTGGAACAGCAGAGACTTGAACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TGGGCAAGTCCTTGCCATGTTCCAGAGAGCTGGCCATaGGAAGCCGCTCAGTCACCCACAATATCTCATCCT +
Preference number: 6 (lower is better)
Translates to: WASPCHVPESWP*EAAQSPTISHP
Trigger: AGGATGAGATATTGTGGGTGACTGAGCGGCTTCCCATGGCCAGCTCTCTGGAACATGGCAAGGACTTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AAAGACTGCAGCTGGTTCTGGACTCCACTCAGGGAGTaGGCCAGCTGTCGGTCATTGAGGGTCACGATCGTT +
Preference number: 6 (lower is better)
Translates to: KDCSWFWTPLRE*ASCRSLRVTIV
Trigger: AACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGTGGAGTCCAGAACCAGCTGCAGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CGGTGCAGGTCCTCCAGCTTCTCTGACACTACGACTTaGAGTTCTGGCTTTTCAAGAGTCAGCTCCCGCCCT +
Preference number: 6 (lower is better)
Translates to: RCRSSSFSDTTT*SSGFSRVSSRP
Trigger: AGGGCGGGAGCTGACTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp ACTCAGGGAGTTGGCCAGCTGTCGGTCATTGAGGGTCACGATCGTTaGCTCAATCCACTGCAGCAGTTCAGAGGCCAGGGACTCGTATTT +
Preference number: 6 (lower is better)
Translates to: TQGVGQLSVIEGHDR*LNPLQQFRGQGLVF
Trigger: AAATACGAGTCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCGACAGCTGGCCAACTCCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp AGAGCAGGTCCTGAAACACTTTCTGCAGCTCCAGGTTaGGAAGAAGTCTCTCACGGCGGGCAGCCACCATTT +
Preference number: 6 (lower is better)
Translates to: RAGPETLSAAPG*EEVSHGGQPPF
Trigger: AAATGGTGGCTGCCCGCCGTGAGAGACTTCTTCTCAACCTGGAGCTGCAGAAAGTGTTTCAGGACCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GGTGCAGGTCCTCCAGCTTCTCTGACACTACGACTTTaGGTTCTGGCTTTTCAAGAGTCAGCTCCCGCCCTT +
Preference number: 6 (lower is better)
Translates to: GAGPPASLTLRL*VLAFQESAPAL
Trigger: AAGGGCGGGAGCTGACTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp ACACTGGGTGCTTGTGTGGATGGTGGCAATTTTGACTaGGTCCCATCCCAGGCAGTGTCAGGAACTCTCTGG +
Preference number: 6 (lower is better)
Translates to: TLGACVDGGNFD*VPSQAVSGTLW
Trigger: CCAGAGAGTTCCTGACACTGCCTGGGATGGGACTCAGTCAAAATTGCCACCATCCACACAAGCACCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CCTGGGTCTCTGTGCACTCTAGGTGGTAATTCTGGATaGTCAGGGCTGATGTCAGAGCCGCCTTTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: PGSLCTLGGNSG*SGLMSEPPFCH
Trigger: ATGGCAAAAAGGCGGCTCTGACATCAGCCCTGAGCATCCAGAATTACCACCTAGAGTGCACAGAGACCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GCTCATGAAGTCTTCCAGCTTTTTAATGGCTGCATCTaGCGCCTGCAGTGTCCCTGGCATCTCCGTGTGAGA +
Preference number: 6 (lower is better)
Translates to: AHEVFQLFNGCI*RLQCPWHLRVR
Trigger: TCTCACACGGAGATGCCAGGGACACTGCAGGCGGCAGATGCAGCCATTAAAAAGCTGGAAGACTTCATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CCGAGGCTCCCACGCCGAAGTACACAGTACACATTCTaGCATGACCTGTTGGCAGCTTTCTTGTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: PRLPRRSTQYTF*HDLLAAFLLKA
Trigger: AGCCTTCAACAAGAAAGCTGCCAACAGGTCATGGCAGAATGTGTACTGTGTACTTCGGCGTGGGAGCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp GCACCGCCTCCTGATTCTTTCTGTGCCTCTTCTCGATaGAGTCCGCCTTCTCTTGGATCTTCTCAGCATGGA +
Preference number: 6 (lower is better)
Translates to: APPPDSFCASSR*SPPSLGSSQHG
Trigger: TCCATGCTGAGAAGATCCAAGAGAAGGCGGACTCCATCGAGAAGAGGCACAGAAAGAATCAGGAGGCGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp CTCTCTTTGAGGTCTGCAATCCGGGGCTCATGGCCCTaGATCTCCTTCTGCAGGGTCTGGTTTTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: LSLRSAIRGSWP*ISFCRVWFFFM
Trigger: CATGAAGAAAAACCAGACCCTGCAGAAGGAGATCCAGGGCCATGAGCCCCGGATTGCAGACCTCAAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CTTCTCATCGATCCAGAGTCTCAGCTCCTGACAGTCTaGCAAGAAGTGCTGCTGCTCTCGGTTGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: LLIDPESQLLTV*QEVLLLSVVPK
Trigger: CTTCGGGACAACCGAGAGCAGCAGCACTTCTTGCAAGACTGTCAGGAGCTGAGACTCTGGATCGATGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp TTCATCCCAGCGCCGGTGCAGGTCCTCCAGCTTCTCTaGCACTACGACTTTGAGTTCTGGCTTTTCAAGAGT +
Preference number: 6 (lower is better)
Translates to: FIPAPVQVLQLL*HYDFEFWLFKS
Trigger: ACTCTTGAAAAGCCAGAACTCAAAGTCGTAGTGTCAGAGAAGCTGGAGGACCTGCACCGGCGCTGGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CGGTCATTGAGGGTCACGATCGTTTGCTCAATCCACTaGAGCAGTTCAGAGGCCAGGGACTCGTATTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSLRVTIVCSIH*SSSEARDSYFS
Trigger: AGAGAAATACGAGTCCCTGGCCTCTGAACTGCTGCAGTGGATTGAGCAAACGATCGTGACCCTCAATGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp CATAGTGCTCATGAAGTCTTCCAGCTTTTTAATGGCTaGATCTGCCGCCTGCAGTGTCCCTGGCATCTCCGT +
Preference number: 6 (lower is better)
Translates to: HSAHEVFQLFNG*ICRLQCPWHLR
Trigger: ACGGAGATGCCAGGGACACTGCAGGCGGCAGATGCAGCCATTAAAAAGCTGGAAGACTTCATGAGCACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp AAGGGCTTGTTCCAATACCTGATGCTTCTTCACTTCTaGCTGGGCGCTCAGCTCATCCTTGGCCTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: KGLFQYLMLLHF*LGAQLILGLFL
Trigger: CAGGAAAAGGCCAAGGATGAGCTGAGCGCCCAGGCAGAAGTGAAGAAGCATCAGGTATTGGAACAAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp AAGACATATTCCTGGCTGCTGAGAACACCCTCAGCCTaGCGAGCATCTCTTAAAAACCCCTGGAAGCCATGG +
Preference number: 6 (lower is better)
Translates to: KTYSWLLRTPSA*RASLKNPWKPW
Trigger: CCATGGCTTCCAGGGGTTTTTAAGAGATGCTCGCCAGGCTGAGGGTGTTCTCAGCAGCCAGGAATATGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CCA 72 bp TCCTTCAGGCTGGCGTACAGCTTGTCCACCTGGGCTTaGCGTATTGTTAGTCTTGTGCTCTCTGGATGTTCA +
Preference number: 6 (lower is better)
Translates to: SFRLAYSLSTWA*RIVSLVLSGCS
Trigger: TGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp GGCTGGCGTACAGCTTGTCCACCTGGGCTTGGCGTATaGTTAGTCTTGTGCTCTCTGGATGTTCATGGTCAA +
Preference number: 6 (lower is better)
Translates to: GWRTACPPGLGV*LVLCSLDVHGQ
Trigger: TTGACCATGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp GAATTTGTCCCGAAGCATAGTCACGTGCTCATAGTCTaGGCCCAGTTCATGGGAGGCTGCCACAACTTCACG +
Preference number: 6 (lower is better)
Translates to: EFVPKHSHVLIV*AQFMGGCHNFT
Trigger: CGTGAAGTTGTGGCAGCCTCCCATGAACTGGGCCAAGACTATGAGCACGTGACTATGCTTCGGGACAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp AGGCTCCCACGCCGAAGTACACAGTACACATTCTGCCATGACCTGTaGGCAGCTTTCTTGTTGAAGGCTTCCATCTCTTGTTTGCGGCAC +
Preference number: 6 (lower is better)
Translates to: RLPRRSTQYTFCHDL*AAFLLKASISCLRH
Trigger: GTGCCGCAAACAAGAGATGGAAGCCTTCAACAAGAAAGCTGCCAACAGGTCATGGCAGAATGTGTACTGTGTACTTCGGCGTGGGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp TCCATCCACAGCATCAACTCTCGGACAGCCTTAAAGAATCGGAATTaGTCCGTGGTATCCAGTAACAGCTGTCGGCGGGCAGCAGAACTT +
Preference number: 6 (lower is better)
Translates to: SIHSINSRTALKNRN*SVVSSNSCRRAAEL
Trigger: AAGTTCTGCTGCCCGCCGACAGCTGTTACTGGATACCACGGACAAATTCCGATTCTTTAAGGCTGTCCGAGAGTTGATGCTGTGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TTCAGGGACTCAAAATCCAACAGGTCTGGCCGGTGTTaGTGCACAATGGCATTAAAGGCCAGCCCATCTCTC +
Preference number: 6 (lower is better)
Translates to: FRDSKSNRSGRC*CTMALKASPSL
Trigger: GAGAGATGGGCTGGCCTTTAATGCCATTGTGCACAAACACCGGCCAGACCTGTTGGATTTTGAGTCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp AGCATCAACTCTCGGACAGCCTTAAAGAATCGGAATTaGTCCGTGGTATCCAGTAACAGCTGTCGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: SINSRTALKNRN*SVVSSNSCRRA
Trigger: TGCCCGCCGACAGCTGTTACTGGATACCACGGACAAATTCCGATTCTTTAAGGCTGTCCGAGAGTTGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 90 bp GCTCCTTCAGGCTGGCGTACAGCTTGTCCACCTGGGCTTGGCGTATaGTTAGTCTTGTGCTCTCTGGATGTTCATGGTCAATCATATCTT +
Preference number: 6 (lower is better)
Translates to: APSGWRTACPPGLGV*LVLCSLDVHGQSYL
Trigger: AAGATATGATTGACCATGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGCTGTACGCCAGCCTGAAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp GGTCAATCATATCTTGACTGCTGGCTGCTAGTTGTTTaGTGGTCTGGGCATAGTCAGCAAGGGCTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: GQSYLDCWLLVV*WSGHSQQGLVP
Trigger: TGGAACAAGCCCTTGCTGACTATGCCCAGACCATCAAACAACTAGCAGCCAGCAGTCAAGATATGATTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp TACACATTCTGCCATGACCTGTTGGCAGCTTTCTTGTaGAAGGCTTCCATCTCTTGTTTGCGGCACAGCATC +
Preference number: 6 (lower is better)
Translates to: YTFCHDLLAAFL*KASISCLRHSI
Trigger: GATGCTGTGCCGCAAACAAGAGATGGAAGCCTTCAACAAGAAAGCTGCCAACAGGTCATGGCAGAATGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp CGCCGAAGTACACAGTACACATTCTGCCATGACCTGTaGGCAGCTTTCTTGTTGAAGGCTTCCATCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RRSTQYTFCHDL*AAFLLKASISC
Trigger: ACAAGAGATGGAAGCCTTCAACAAGAAAGCTGCCAACAGGTCATGGCAGAATGTGTACTGTGTACTTCGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS TCA 72 bp CTTGTGCTCTCTGGATGTTCATGGTCAATCATATCTTaGCTGCTGGCTGCTAGTTGTTTGATGGTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LVLSGCSWSIIS*LLAASCLMVWA
Trigger: TGCCCAGACCATCAAACAACTAGCAGCCAGCAGTCAAGATATGATTGACCATGAACATCCAGAGAGCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS GCA 72 bp GCTTGTCCACCTGGGCTTGGCGTATTGTTAGTCTTGTaGTCTCTGGATGTTCATGGTCAATCATATCTTGAC +
Preference number: 6 (lower is better)
Translates to: ACPPGLGVLLVL*SLDVHGQSYLD
Trigger: GTCAAGATATGATTGACCATGAACATCCAGAGAGCACAAGACTAACAATACGCCAAGCCCAGGTGGACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8
CDS CAA 72 bp ATCTCTGCCTCGTCCTTGGCCTGGAATAGGTATTCTTaGCCATCCTGTAAGCCCAGCTTGAAAACATGTTTG +
Preference number: 6 (lower is better)
Translates to: ISASSLAWNRYS*PSCKPSLKTCL
Trigger: CAAACATGTTTTCAAGCTGGGCTTACAGGATGGCAAAGAATACCTATTCCAGGCCAAGGACGAGGCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008991.8