RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPTA1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026532

Ensembl transcript IDs: ENSMUST00000027817.8

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACTTGCTGCCACACTATaGTTTTCTATGATGCATAAG +
Preference number: 2 (lower is better)
Translates to: SECSKILKVCSTHTHTHTLAATL*FSMMHK
Trigger: CTTATGCATCATAGAAAATCATAGTGTGGCAGCAAG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
3UTR-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAAAATCTTAAAGGTGTaGAGCACACACACACATACA +
Preference number: 2 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRKILKV*STHTHT
Trigger: TGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
3UTR-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACTTATCCCCCATTACTaGCTGCCACACTATGATTTT +
Preference number: 3 (lower is better)
Translates to: SECSKILKVCSTHTHTHTLIPHY*LPHYDF
Trigger: AAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGAGGGCCTGGACACTaGGCAGGTCAGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGGPGH*AGQSQG
Trigger: ACCCTGGCTCTGACCTGCTCAGTGTCCAGGCCCTCC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATGCCTCTGGAGGGCCTaGACACTGAGCAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLCLWRA*TLSRSE
Trigger: CTCTGACCTGCTCAGTGTCCAGGCCCTCCAGAGGCA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGCCGACTGGCCTCGTTaGGCTTCTGTCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLADWPR*ASVLCQ
Trigger: CTGACAAAGGACAGAAGCTCAACGAGGCCAGTCGGC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGTGATCCCTGTCGTCTaGCCTCAGGGAATTCTCACG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLVIPVV*PQGILT
Trigger: CGTGAGAATTCCCTGAGGTCAGACGACAGGGATCAC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCATGCTTATGCTGCTaGTGCCTGGCTAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSCLCC*CLASRA
Trigger: AGCCCTGCTAGCCAGGCACCAGCAGCATAAGCATGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTGAGGGATGTTGACTaGCTCCTCTTGCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLRDVD*LLLPML
Trigger: CAGCATCGGCAAGAGGAGCCAGTCAACATCCCTCAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGTCATTCAGATCTTTaGGAGGGTCCTCTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGHSDL*EGPLVP
Trigger: TGGCACGAGAGGACCCTCTCAAAGATCTGAATGACC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAACCAGGAAGGCTTCATaGTTCTTGAGAAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLTRKAS*FLRRAP
Trigger: TGGGGCCCTTCTCAAGAAGCATGAAGCCTTCCTGGT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCGTGGTGTGCAGCTaGCAAGCTCTGGACATTTTC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLVVCS*QALDIF
Trigger: GAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTTCCGAATGGCCAGTaGCTCCTTCAGAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLPNGQ*LLQSLK
Trigger: TTTGAGGCTCTGAAGGAGCCACTGGCCATTCGGAAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACCTTTCCAAGATGAGTaGAAGCTGCTGAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLPFQDE*KLLRAQ
Trigger: CTGAGCCCTCAGCAGCTTCCACTCATCTTGGAAAGG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCAATCTCATGCTTATaGTGCTGGTGCCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSISCL*CWCLAS
Trigger: GCTAGCCAGGCACCAGCAGCATAAGCATGAGATTGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACCCTTTTTGTGCTGTTaGCTCCAGCAACTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLPFLCC*LQQLLP
Trigger: TGGAAGGAGTTGCTGGAGGCAACAGCACAAAAAGGG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTGAGTCCCTTTTTGTaGTGTTGCCTCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLSPFL*CCLQQL
Trigger: GAGTTGCTGGAGGCAACAGCACAAAAAGGGACTCAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAAGCCTCGTCCACTGGTaGTGCCTGCTGTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSLVHW*CLLLLA
Trigger: TGCCAGCAACAGCAGGCAGCACCAGTGGACGAGGCT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCCAACATGTCTCCTaGCTCATAGGCCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLQHVS*LIGQQK
Trigger: TTTCTGCTGGCCTATGAGGCAGGAGACATGTTGGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCAAAGACTTCATGTTaGCTCTGGAGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSKTSC*LWRAWT
Trigger: TGTCCAGGCCCTCCAGAGGCAACATGAAGTCTTTGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACCAGCAAGATCTCTGTaGCAGTTAAGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLPARSL*QLSPQP
Trigger: TGGCTGAGGACTTAACTGGCACAGAGATCTTGCTGG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCCATCACACACTCTaGGCTCAATCAGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLHHTL*AQSGNS
Trigger: GGAATTCCCTGATTGAGCGCAGAGTGTGTGATGGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAATAGGCCTTGCCTTCTaGCAGAGCTTGGAATGCACT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLIGLAF*QSLECT
Trigger: AGTGCATTCCAAGCTCTGGCAGAAGGCAAGGCCTAT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCTGCCAGGTACTGTTaGAGCTGGACATTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSARYC*SWTLAL
Trigger: TAAGGCCAATGTCCAGCTCCAACAGTACCTGGCAGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCCGGATGCTTGTGTTaGACCTTTGCTGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPGCLC*TFAADW
Trigger: CCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACAGTGTTGGACAAACTaGGCCAGCCGCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTQCWTN*ASRSWI
Trigger: GATCCAGGAGCGGCTGGCTCAGTTTGTCCAACACTG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCTTCGCCAACTCTTTaGGCTTTTCCCAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSSPTL*AFPSVG
Trigger: TCCAACACTGGGAAAAGCTCAAAGAGTTGGCGAAGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCCTCAGAGGTGAGCTaGGGCTCCTTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSSEVS*GSFSSI
Trigger: GATGGAGGAGAAGGAGCCGCAGCTCACCTCTGAGGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACAGAAGCTTCGTGATTaGCATCCAGGAGTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLQKLRD*HPGVLD
Trigger: GTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACAGATGGCGCTTCATTaGCTGGATCTCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLQMALH*LDLLLF
Trigger: AAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGCTTCAGATGGGTCTTaGTGGCTTCATGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLASDGS*WLHGQN
Trigger: ATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGCAGGGCTTCTCCACTaGCCACATCTGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTAGLLH*PHLLAA
Trigger: AGCTGCCAACAGATGTGGCCAGTGGAGAAGCCCTGC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATGCAGTTCTAAGCACTaGTCTAGCATCTTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLCSSKH*SSIFLR
Trigger: CCGCAAGAAGATGCTAGACCAGTGCTTAGAACTGCA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATGGCGCTTCATTGCCTaGATCTCCTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLWRFIA*ISFCFL
Trigger: AAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACCTTCTGCCAGAGCTTaGAATGCACTCTCTATGTCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLPSARA*NALSMS
Trigger: TGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAGG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGGAGCTGAGGGATGTTaGCTGGCTCCTCTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRGAEGC*LAPLAD
Trigger: ATCGGCAAGAGGAGCCAGTCAACATCCCTCAGCTCC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCATCTGCTTCCCTGTaGAACATCTCAACAGCATGT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSSASL*NISTAC
Trigger: ACATGCTGTTGAGATGTTTCACAGGGAAGCAGATGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTATCTGGTCAATGTTaGAAGTCCCACTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLSGQC*KSHWRS
Trigger: TGATCTCCAGTGGGACTTTCAACATTGACCAGATAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTCTTTAGCAAACTCTaGGTAGCAGCCAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFFSKL*VAASVS
Trigger: AGACACACTGGCTGCTACTCAGAGTTTGCTAAAGAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACCAGTTGTTGAAGGCTaGAGCTTTGTGTGCAAATTC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLPVVEG*SFVCKF
Trigger: GAATTTGCACACAAAGCTTCAGCCTTCAACAACTGG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGAAAGCCTCTTGTCTaGTCATCCAACTATCCACTT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGKPLV*SSNYPL
Trigger: AAGTGGATAGTTGGATGAGCAGACAAGAGGCTTTCC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTGATACTGTTCATCTaGCAGCCTCTTCAGGGAATT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLILFI*QPLQGI
Trigger: AATTCCCTGAAGAGGCTGGCAGATGAACAGTATCAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGTGTTGAACCTTTGCTaGCGACTGGCCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTVLNLC*RLASLS
Trigger: GCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACAC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGTGCCTCAGCAAGGCTaGATGCTGCTCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRVPQQG*MLLLNG
Trigger: GCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCAC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGCTTCATGGGCAAAATaGTCTTCTGCAAATCGAGCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLASWAK*SSANRA
Trigger: AGCTCGATTTGCAGAAGACCATTTTGCCCATGAAGC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGTGCATCTGCAGAATaGGAAATCATCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGASAE*EIISLS
Trigger: AGACAAGCTGATGATTTCCCATTCTGCAGATGCACC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATATGCTGCTGGTGCCTaGCTAGCAGGGCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRYAAGA*LAGLLH
Trigger: GTGGAGAAGCCCTGCTAGCCAGGCACCAGCAGCATA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAACTTCATGTTGCCTCTaGAGGGCCTGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTTSCCL*RAWTLS
Trigger: GCTCAGTGTCCAGGCCCTCCAGAGGCAACATGAAGT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAAGGTCTTGGAAGAACTaGAACAAGGCATACGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLRSWKN*NKAYVS
Trigger: AGAGACGTATGCCTTGTTCCAGTTCTTCCAAGACCT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGCTCCTCAATGGCTTTaGCTTGGCTGTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTAPQWL*LGCAHQ
Trigger: CTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACACCTATGGTGTCTTTaGCTTGAATCTGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLHLWCL*LESVAP
Trigger: TGGAGCAACAGATTCAAGCCAAAGACACCATAGGTG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTTCAAGCTTTTCCATaGTCCACTTCTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFQAFP*STSPGH
Trigger: ATGACCTGGAGAAGTGGATCATGGAAAAGCTTGAAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGACTTTCTCGTCTCTTaGGAGCCAGGCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRDFLVS*EPGSRD
Trigger: GTCTCTGGAGCCTGGCTCTCAAGAGACGAGAAAGTC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCACCTTGTCATCCATaGCCGCGAGATTCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSPCHP*PRDSSR
Trigger: TCGAGAGGAATCTCGCGGTCATGGATGACAAGGTGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGGCGGTATTGGTGCTaGCACTTGTCCCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRWRYWC*HLSHSS
Trigger: GGAACTGTGGGACAAGTGTCAGCACCAATACCGCCA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAGGCTTCATGCTTCTTaGGAAGGGCCCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRRLHAS*EGPQLL
Trigger: AAGCAGCTGGGGCCCTTCTCAAGAAGCATGAAGCCT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGGCACAAAGCCCTGGTaGTCATCAGCTTCAACCTTC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTGTKPW*SSASTF
Trigger: GAAGGTTGAAGCTGATGATCACCAGGGCTTTGTGCC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACGTCAGCCACTTTGTTaGTGTCCTTTAGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTRQPLC*CPLAEA
Trigger: AGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGTTAAGTCCCTGGCCTaGTCCTTCATGGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTVKSLA*SFMANK
Trigger: CTTGTTGGCCATGAAGGATCAGGCCAGGGACTTAAC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCTTGCTGGAAGCTCTaGAGACTGGCATCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSCWKL*RLASSV
Trigger: CACACTGGATGCCAGTCTTCAGAGCTTCCAGCAAGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACAAAGAATGAATTGGTaGAGCCAACATAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLQRMNW*SQHSRS
Trigger: GCTACGACTATGTTGGCTTCACCAATTCATTCTTTG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGGCCAAGGCACGGATaGGTTCCCAGTTGGAGACTA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRWPRHG*VPSWRL
Trigger: TAGTCTCCAACTGGGAACGCATCCGTGCCTTGGCCA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACAAGGATTCCTGCCTTaGACGGATGTCCCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRQGFLP*TDVPRV
Trigger: GACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGAGAAGGGCCCCAGCTaGTTCTTCATCAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTEKGPS*FFISSI
Trigger: TATGGAGCTGATGAAGAAGCAGCTGGGGCCCTTCTC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTTCCTCGGAATAACTaGAGTTCTAAGCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFPRNN*SSKHWS
Trigger: AGACCAGTGCTTAGAACTGCAGTTATTCCGAGGAAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAGCAGTTGTTCCCAGTaGCTCAGCAAGGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSSCSQ*LSKAAC
Trigger: GCATGCAGCCTTGCTGAGGCACTGGGAACAACTGCT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCAGAGCCTCTTCCATaGTGTCCCCCAGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSEPLP*CPPGLQ
Trigger: TTGAAGACCTGGGGGACAGCATGGAAGAGGCTCTGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGCTTCTTCTTCCGAATaGCCAGTGGCTCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTASSSE*PVAPSE
Trigger: CTCTGAAGGAGCCACTGGCCATTCGGAAGAAGAAGC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCTTTAGATCCCTCTaGAACTCGTCAAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLFRSL*NSSNFF
Trigger: GAAGAAGTTTGACGAGTTCCAGAGGGATCTAAAGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCAATGGCTTTGGCTTaGCTGTGCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSMALA*LCSPAT
Trigger: TGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGATCCCAGGCAGCATTaGCTTCATCCTGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTDPRQH*LHPVLP
Trigger: AGGCAAAACAGGATGAAGTCAATGCTGCCTGGGATC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCATCCAGGAGTTCTTaGCCAGTTGCATCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPSRSS*PVASAD
Trigger: ATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAAGTCCTGCTGCTTCTaGACCCGGCTCTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRKSCCF*TRLFKF
Trigger: GAACTTGAAGAGCCGGGTTCAGAAGCAGCAGGACTT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGCAGACTGTTTAAGTaGTCCCTGTCGTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTCRLFK*SLSSDL
Trigger: GAGGTCAGACGACAGGGATCACTTAAACAGTCTGCA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCTGCTTCCAATAGCTaGTGCTTCTTAAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSASNS*CFLSRF
Trigger: AAACCTACTTAAGAAGCATCAGCTATTGGAAGCAGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTGGAGATCAGCTCCTaGGCCAGGTCATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLEISS*ARSFRS
Trigger: AGATCTGAATGACCTGGCTCAGGAGCTGATCTCCAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGTCTCCTGGATCCACTaGAGGAAGGCACTGGCATTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRVSWIH*RKALAF
Trigger: AAATGCCAGTGCCTTCCTTCAGTGGATCCAGGAGAC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGAGCGGAACTCTTTGTaGGTCAATCGCCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRERNSL*VNRPVK
Trigger: CTTGACAGGGCGATTGACTCACAAAGAGTTCCGCTC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGTCAATAAGCTTGGTTaGAGTCTCATCCAAGGTTAT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLVNKLG*SLIQGY
Trigger: ATAACCTTGGATGAGACTGCAACCAAGCTTATTGAC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGAAAGCAAGGATTCCTaGCTTGCACGGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRESKDS*LARMSP
Trigger: TGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGCTTCATGCAGATCTaGCAGGTACTGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTCFMQI*QVLLEL
Trigger: CAGCTCCAACAGTACCTGGCAGATCTGCATGAAGCA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTGACTGGCTCCTCTTaGCGATGCTGTGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLTGSS*RCCGKP
Trigger: AGGTTTCCCACAGCATCGGCAAGAGGAGCCAGTCAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTTGTGTTGAACCTTTaGTGCCGACTGGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLVLNL*CRLASL
Trigger: CAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGAGAGGGTCCTCTCGTaGCAACATCTCTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRERVLS*QHLCFQ
Trigger: TTGGAAGCAGAGATGTTGGCACGAGAGGACCCTCTC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTAATAGCTCGAGCATaGAGAGACTCCATATTTTTG +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLIARA*RDSIFL
Trigger: CAAAAATATGGAGTCTCTCCATGCTCGAGCTATTAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCTGTCTTTTTCTCTTaGATCCACTCCAACATGTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSVFFS*IHSNMS
Trigger: AGACATGTTGGAGTGGATCCAAGAGAAAAAGACAGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCTGTAGGTCCTCAGTaGCATCTGGGTGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSVGPQ*HLGVIH
Trigger: GTGAATCACACCCAGATGCCACTGAGGACCTACAGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAAAGAGGAAGAATTTATaGGCTTCATTCAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLKRKNL*ASFRLS
Trigger: GGAGAGTCTGAATGAAGCCCATAAATTCTTCCTCTT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGGCCTGATCCTTCATaGCCAACAAGCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRWPDPS*PTSLLP
Trigger: AGGCAGAAGGCTTGTTGGCCATGAAGGATCAGGCCA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCTTTCAGCTTCTCGTaGTGTGCAGCTGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSFSFS*CAAAKL
Trigger: GAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCACCAGCCACAAGCTaGTCCTTCAGCTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSPATS*SFSSAI
Trigger: AATCGCTGAGCTGAAGGACCAGCTTGTGGCTGGTGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACATGCTGCTCCTCAATaGCTTTGGCTTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRHAAPQ*LWLGCA
Trigger: AGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACAAATCGAGCTTCCCTaGTTTCCTCCAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRQIELP*FPPAQE
Trigger: TTCCTGAGCTGGAGGAAATCAGGGAAGCTCGATTTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTCCTTCATCCAGCCTaGGAGCTCATCATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFLHPA*ELIIVR
Trigger: TCTGACTATGATGAGCTCTCAGGCTGGATGAAGGAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGGCAGACTTCTGCCTaGTCTCTTAGAGCCTTTATG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTWQTSA*SLRAFM
Trigger: CATAAAGGCTCTAAGAGATCAGGCAGAAGTCTGCCA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCCCTTCCTGGGCAGTaGTTGCTTTGTCCAAATCAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSLPGQ*LLCPNH
Trigger: ATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACAAGCCTTCTGCCTCTaGAAGCCAGAACTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRQAFCL*KPELKV
Trigger: GACTTTGAGTTCTGGCTTTCAGAGGCAGAAGGCTTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCTCACACCAGTTGTTaGAGGCTGAAGCTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSHTSC*RLKLCV
Trigger: CACACAAAGCTTCAGCCTTCAACAACTGGTGTGAGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAACAATGCACAGGTTCTaGCAAGTCCTCTTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRTMHRF*QVLFRV
Trigger: AACGCGGAAGAGGACTTGTCAGAACCTGTGCATTGT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATGTATGGTACAGAATaGCACTTGTTCCGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTMYGTE*HLFRGE
Trigger: CTCACCCCGGAACAAGTGTCATTCTGTACCATACAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGTGATTGTGAAACAATaGCTCAGAACTAACAAGATC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLVIVKQ*LRTNKI
Trigger: GATCTTGTTAGTTCTGAGGCATTGTTTCACAATCAC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACATAATCTCATTCACTaGCAATTCCTCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLHNLIH*QFLFKV
Trigger: GACTTTGAAGAGGAATTGGCAGTGAATGAGATTATG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACATGCTTCTGCTTCATaGAGATCTGCCAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTHASAS*RSARYC
Trigger: ACAGTACCTGGCAGATCTGCATGAAGCAGAAGCATG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATATGCTGTTTTCAAATaGATTCAGATCCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLYAVFK*IQIHQE
Trigger: TTCCTGGTGGATCTGAATGCATTTGAAAACAGCATA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACATCTCAACAGCATGTaGACTGCTGAGCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTHLNSM*TAEQLI
Trigger: TATCAGCTGCTCAGCAGTGCACATGCTGTTGAGATG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTCCTGGGCAGTGATTaGTTTGTCCAAATCATCCCG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFLGSD*FVQIIP
Trigger: CGGGATGATTTGGACAAAGCAATCACTGCCCAGGAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTTCTCCCCCAGCCATaGTTCCTCTTCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLLPQP*FLFFCI
Trigger: AATGCAGAAGAAGAGGAAGCATGGCTGGGGGAGAAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTCTGTAGAGGCAGCTaGTTTTCCAGCAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFCRGS*FSSSFC
Trigger: GCAGAAACTGCTGGAAAAGCAGCTGCCTCTACAGAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCCCCTGTATGTTTGTaGGTTCATATGTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSPVCL*VHMSYL
Trigger: AAGATAAGACATATGAACCCACAAACATACAGGGGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGTCTTGGTGGCTTCATaGGCAAAATGGTCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTVLVAS*AKWSSA
Trigger: TGCAGAAGACCATTTTGCCCATGAAGCCACCAAGAC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCAGCTTGTCTGCTTTaGCACACAACTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSACLL*HTTPSP
Trigger: AGGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGAACTTGGATCTTGGTaGAAATCTTATCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLELGSW*KSYPCS
Trigger: AGAACAAGGATAAGATTTCCACCAAGATCCAAGTTC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTGCACCGTTGCTCTTaGTCTTCAGGCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLHRCS*SSGLLL
Trigger: AAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACCAGAAAATAGGCCCTaGTCTCCTGGATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRPENRP*SPGSTE
Trigger: TTCAGTGGATCCAGGAGACCAGGGCCTATTTTCTGG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTGGCTCCGACCCCGTaGATCCATATATTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLAPTP*IHILLH
Trigger: ATGCAGCAATATATGGATCCACGGGGTCGGAGCCAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGCAGCTCATCAGCATTaGTCAGAGCAGTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRAAHQH*SEQSFP
Trigger: AGGAAAAGACTGCTCTGATCAATGCTGATGAGCTGC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTCTTCCTGGGCAGTaGACGCTTCTTCAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFLPGQ*TLLQSH
Trigger: ATGACTTTGAAGAAGCGTTCACTGCCCAGGAAGAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCTCATCCAAGGTTATaGTCTTTTCTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSHPRL*SFLPGQ
Trigger: CTGCCCAGGAAGAAAAGATCATAACCTTGGATGAGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTTCTCCCAGGGGGATaGTGTCTCTCTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFLPGG*CLSQRL
Trigger: AAGTCTTTGAGAGAGACATCATCCCCCTGGGAGAAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGAGTTCCTGTTTCCTTaGGCAATGATCCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTEFLFP*AMIHPE
Trigger: TTCTGGATGGATCATTGCTCAAGGAAACAGGAACTC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGTACCCGGTTCTTGTaGACAGCAAAGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRCTRFL*TAKSFS
Trigger: GGAGAATGACTTTGCTGTGCACAAGAACCGGGTACA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACTTGGTCTTCAGGCTTaGTTCTTTCTCACCTATCCA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTLGLQA*FFLTYP
Trigger: TGGATAGGTGAGAAAGAAGCAAGCCTGAAGACCAAG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCAGATGGGTCTTGGTaGCTTCATGGGCAAAATGGT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSDGSW*LHGQNG
Trigger: ACCATTTTGCCCATGAAGCCACCAAGACCCATCTGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCCCTTTTAAATCGCTaGAGGTCTGCTGCATTAGAC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSLLNR*RSAALD
Trigger: GTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGAAATCTTCCCTTCCTaGGCAGTGATTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTREIFPS*AVIALS
Trigger: GGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCTCACTCACACCTATaGTGTCTTTGGCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPHSHL*CLWLES
Trigger: AGATTCAAGCCAAAGACACCATAGGTGTGAGTGAGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACATCTGCGTCTCTCCTaGAAACTTGATAGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRHLRLS*KLDSGK
Trigger: CTTACCACTATCAAGTTTTCAGGAGAGACGCAGATG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTAGCTTCATACAGCTaGGTCCCTTTTTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTLASYS*VPFCAV
Trigger: AACAGCACAAAAAGGGACTCAGCTGTATGAAGCTAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGTGTGCAAATTCCATaGATAGCTCCTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRCVQIP*IAPQPS
Trigger: AGAAGGCTGAGGAGCTATTCATGGAATTTGCACACA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACAATGGTGCTGTATTTaGTATCAAGGATCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTQWCCI*YQGSEP
Trigger: AGGCTCTGATCCTTGATATCAAATACAGCACCATTG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGGTCTTGATATTCTCTaGCTCCTTGTCAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTGLDIL*LLVNQE
Trigger: TTCCTGATTGACAAGGAGTCAGAGAATATCAAGACC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGTCATCGCTGGTCTTaGTATTCTCTGACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRCHRWS*YSLTPC
Trigger: ACAAGGAGTCAGAGAATATCAAGACCAGCGATGACA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGGCAAAATGGTCTTCTaGAAATCGAGCTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRGKMVF*KSSFPD
Trigger: ATCAGGGAAGCTCGATTTGCAGAAGACCATTTTGCC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCTTCAAACTTCTTATaGAGGACCTCAGTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSSNFL*RTSVRS
Trigger: GGAGCGAACTGAGGTCCTGCATAAGAAGTTTGAAGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACTGTTGAATCTGAGGTaGATCTGCAGAATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTLLNLR*ICRMGN
Trigger: ATTTCCCATTCTGCAGATGCACCTCAGATTCAACAG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTAATCCATGCTTCTaGTTCATGCAGATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFNPCF*FMQICQ
Trigger: CTGGCAGATCTGCATGAAGCAGAAGCATGGATTAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCGTCAAACTTCTTCTaGAGTTCCCAAACATCATCC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSSNFF*SSQTSS
Trigger: GGATGATGTTTGGGAACTGCAGAAGAAGTTTGACGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTGTCCAGTTGCTCCTaGATGTTCTCTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLSSCS*MFSSSP
Trigger: TGGAGATGAAGAGAACATGCAGGAGCAACTGGACAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTAGCTTGTCCAGTTaGTCCTGCATGTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFSLSS*SCMFSS
Trigger: TGAAGAGAACATGCAGGAGCAACTGGACAAGCTAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTAGAGAGACACAATaGACAGGTTCTGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFRETQ*TGSDKS
Trigger: GGACTTGTCAGAACCTGTGCATTGTGTCTCTCTAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCCGCTCTTCGGTGTTaGATTTCTTCTGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSALRC*ISSAVS
Trigger: AGAAACAGCAGAAGAAATCCAACACCGAAGAGCGGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGAAGGACTCTTGATTTaGCTTGCACCTCTGATACAA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTEGLLI*LAPLIQ
Trigger: TTGTATCAGAGGTGCAAGCCAAATCAAGAGTCCTTC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACAGCAATCTCTTCCTTaGCATAGTGGTCATTGTCTA +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTQQSLP*HSGHCL
Trigger: TAGACAATGACCACTATGCCAAGGAAGAGATTGCTG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCATCATCCAGGTCTTaGAAGAACTGGAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSSSRS*KNWNKA
Trigger: TGCCTTGTTCCAGTTCTTCCAAGACCTGGATGATGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAAGCAGCTAATGCCTTaGCCAAAGAGGCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRKQLMP*PKRLSF
Trigger: AAAAGACAGCCTCTTTGGCCAAGGCATTAGCTGCTT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAACCAGGTATAAGGACTaGAGGGGACATTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRTRYKD*RGHLRL
Trigger: AAGCCTTAAATGTCCCCTCCAGTCCTTATACCTGGT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTCCTTGATGATGTCTaGCAGGTGGTTCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFLDDV*QVVPDS
Trigger: AGAATCTGGAACCACCTGCCAGACATCATCAAGGAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACAATGTCTGCCAGGATaGCTTCATGTCTGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRQCLPG*LHVCLE
Trigger: TTCTAAACAGACATGAAGTCATCCTGGCAGACATTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGTATAGTCTTCCAGTaGAACATATCCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRCIVFQ*NISFPP
Trigger: GGGAGGAAAGGATATGTTTCACTGGAAGACTATACA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAATCTGAGGTGCATCTaGAGAATGGGAAATCATCAG +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRNLRCI*RMGNHQ
Trigger: CTGATGATTTCCCATTCTGCAGATGCACCTCAGATT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTCCTTGACATCATCTaGTTCCCTGTGAAACATCTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFLDII*FPVKHL
Trigger: GAGATGTTTCACAGGGAAGCAGATGATGTCAAGGAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCCTCAATCATCTCCTaGCCTGTTTTCTCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSSIIS*PVFSKL
Trigger: TAACTTGGAGAAAACAGGCCAGGAGATGATTGAGGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATATTACTTGAATCCGTaGTTCATGACTCGCAATGTC +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTYYLNP*FMTRNV
Trigger: GACATTGCGAGTCATGAACCACGGATTCAAGTAATA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCTGTCCTTTGTCAGTaGTTCTCTCTAGGAGATAAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSVLCQ*FSLGDN
Trigger: ATTATCTCCTAGAGAGAACCACTGACAAAGGACAGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAACTGAAGGAAGGCACTaGCATTTTGTTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRTEGRH*HFVQTP
Trigger: AGGAGTTTGAACAAAATGCCAGTGCCTTCCTTCAGT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAACTCTTGATTTGGCTTaGACCTCTGATACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRTLDLA*TSDTKD
Trigger: ATCCTTTGTATCAGAGGTGCAAGCCAAATCAAGAGT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGCGGTCAGTTCTTCCTaGAATTCTTCAAACTTCTTA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRAVSSS*NSSNFL
Trigger: TAAGAAGTTTGAAGAATTCCAGGAAGAACTGACCGC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGTTTAGAAGATTCTTaGCTGCAACCAAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRCLEDS*LQPSPF
Trigger: GAAAGGACTTGGTTGCAGCCAAGAATCTTCTAAACA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCATTTTCAAAGGCTTaGTGCTTCAGATATTTCCTC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSFSKA*CFRYFL
Trigger: GAGGAAATATCTGAAGCATCAAGCCTTTGAAAATGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTTCAAAGCGCTCATTaGCACCATTCATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFQSAH*HHSFSL
Trigger: AAGAGAAAATGAATGGTGTCAATGAGCGCTTTGAAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR TCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCAATTGCCAAAGAATaGATTGGTGAAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSIAKE*IGEANI
Trigger: TATGTTGGCTTCACCAATTCATTCTTTGGCAATTGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTTCTCTTTAATCCATaGTTCTGCTTCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFLFNP*FCFMQI
Trigger: GATCTGCATGAAGCAGAAGCATGGATTAAAGAGAAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGGATCCATATATTGCTaGATATGTATGGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTGSIYC*ICMVQN
Trigger: ATTCTGTACCATACATATGCAGCAATATATGGATCC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACACTCATTAGCATATTaGTTCACTCTGTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRHSLAY*FTLSTF
Trigger: AAAAGTGGACAGAGTGAACCAATATGCTAATGAGTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATTGCTGCATATGTATaGTACAGAATGACACTTGTT +
Preference number: 4 (lower is better)
Translates to: SECSKILKVCSTHTHTHTIAAYV*YRMTLV
Trigger: AACAAGTGTCATTCTGTACCATACATATGCAGCAAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR GCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTCTTAGAGCCTTTATaGTGTTTTCAAATGCATTCA +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLLEPL*CFQMHS
Trigger: TGAATGCATTTGAAAACAGCATAAAGGCTCTAAGAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CCA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTTTGTTCAAACTCCTaGCACATTTCAAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRFCSNS*HISKFL
Trigger: CAAGAACTTTGAAATGTGCCAGGAGTTTGAACAAAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp GGGAGTGGTACAGGGTCTCGACCTGCTGCTGGAGCTGAGGGATGTTaGCTGGCTCCTCTTGCCGATGCTGTGGGAAACCTGGTAGCTCAT +
Preference number: 5 (lower is better)
Translates to: GSGTGSRPAAGAEGC*LAPLADAVGNLVAH
Trigger: ATGAGCTACCAGGTTTCCCACAGCATCGGCAAGAGGAGCCAGTCAACATCCCTCAGCTCCAGCAGCAGGTCGAGACCCTGTACCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp GATGCCTCCAGCAGTTGTTCCCAGTGCCTCAGCAAGGCTGCATGCTaGTCCTCAATGGCTTTGGCTTGGCTGTGCTCACCAGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: DASSSCSQCLSKAAC*SSMALAWLCSPATS
Trigger: GCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCACTGGGAACAACTGCTGGAGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp GTTCCCAGTGCCTCAGCAAGGCTGCATGCTGCTCCTCAATGGCTTTaGCTTGGCTGTGCTCACCAGCCACAAGCTGGTCCTTCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VPSASARLHAAPQWL*LGCAHQPQAGPSAQ
Trigger: CTGAGCTGAAGGACCAGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCACTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp CGAGGGACTCCTCCAAGTTCACCCCTCGGGTCTTCGCCAACTCTTTaGGCTTTTCCCAGTGTTGGACAAACTGAGCCAGCCGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RGTPPSSPLGSSPTL*AFPSVGQTEPAAPG
Trigger: TCCAGGAGCGGCTGGCTCAGTTTGTCCAACACTGGGAAAAGCTCAAAGAGTTGGCGAAGACCCGAGGGGTGAACTTGGAGGAGTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CATAGGCCAGCAGAAACTCATTGTAGCGCTGCAGCAAGCGACGTCTaGGCTCTTCTGCCCGATCTAGGAGGGAGTGGTACAGGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: HRPAETHCSAAASDV*ALLPDLGGSGTGSR
Trigger: TCGAGACCCTGTACCACTCCCTCCTAGATCGGGCAGAAGAGCGCAGACGTCGCTTGCTGCAGCGCTACAATGAGTTTCTGCTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TGCACGGATGTCCCCAGAGTCGGGATGGCCTATCTCTTCAAAGTGTaGCGCCATGTCTGTGAGGGTGTCCACCTGATTCTGACGAGCAGT +
Preference number: 5 (lower is better)
Translates to: CTDVPRVGMAYLFKV*RHVCEGVHLILTSS
Trigger: ACTGCTCGTCAGAATCAGGTGGACACCCTCACAGACATGGCGGCACACTTTGAAGAGATAGGCCATCCCGACTCTGGGGACATCCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp GCCAGTGGCTCCTTCAGAGCCTCAAAACGGGAAAGCAAGGATTCCTaGCTTGCACGGATGTCCCCAGAGTCGGGATGGCCTATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ASGSFRASKRESKDS*LARMSPESGWPISS
Trigger: TGAAGAGATAGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTGAAGGAGCCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CTCAGCAAGGCTGCATGCTGCTCCTCAATGGCTTTGGCTTGGCTGTaGTCACCAGCCACAAGCTGGTCCTTCAGCTCAGCGATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LSKAACCSSMALAWL*SPATSWSFSSAISE
Trigger: TTCTGAAATCGCTGAGCTGAAGGACCAGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TGGCTCCTTCAGAGCCTCAAAACGGGAAAGCAAGGATTCCTGCCTTaGACGGATGTCCCCAGAGTCGGGATGGCCTATCTCTTCAAAGTG +
Preference number: 5 (lower is better)
Translates to: WLLQSLKTGKQGFLP*TDVPRVGMAYLFKV
Trigger: CACTTTGAAGAGATAGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTGAAGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTCTCCCCCAGCCATGCTTCCTCTTCTTCTGCATTCTCCATGAACTaGAGATACTCGAGGGACTCCTCCAAGTTCACCCCTCGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: FSPSHASSSSAFSMN*RYSRDSSKFTPRVF
Trigger: GAAGACCCGAGGGGTGAACTTGGAGGAGTCCCTCGAGTATCTGCAGTTCATGGAGAATGCAGAAGAAGAGGAAGCATGGCTGGGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp CAGAGTCGGGATGGCCTATCTCTTCAAAGTGTGCCGCCATGTCTGTaGGGGTGTCCACCTGATTCTGACGAGCAGTCACATCTGACTCTA +
Preference number: 5 (lower is better)
Translates to: QSRDGLSLQSVPPCL*GCPPDSDEQSHLTL
Trigger: TAGAGTCAGATGTGACTGCTCGTCAGAATCAGGTGGACACCCTCACAGACATGGCGGCACACTTTGAAGAGATAGGCCATCCCGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp GGTGCAGCTGATCCCATTGCTGGGCCAGTCCAATGGTGCTGTATTTaGTATCAAGGATCAGAGCCTCTTCCATGCTGTCCCCCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: GAADPIAGPVQWCCI*YQGSEPLPCCPPGL
Trigger: AAGACCTGGGGGACAGCATGGAAGAGGCTCTGATCCTTGATATCAAATACAGCACCATTGGACTGGCCCAGCAATGGGATCAGCTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CATCTCAACAGCATGTGCACTGCTGAGCAGCTGATACTGTTCATCTaGCAGCCTCTTCAGGGAATTCCAGCGGGTGTTCAACTCCTGTCG +
Preference number: 5 (lower is better)
Translates to: HLNSMCTAEQLILFI*QPLQGIPAGVQLLS
Trigger: CGACAGGAGTTGAACACCCGCTGGAATTCCCTGAAGAGGCTGGCAGATGAACAGTATCAGCTGCTCAGCAGTGCACATGCTGTTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp CCAAGAGCAGATCCCACAGCAGGCGAAGTTGCTTCAGATGGGTCTTaGTGGCTTCATGGGCAAAATGGTCTTCTGCAAATCGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PRADPTAGEVASDGS*WLHGQNGLLQIELP
Trigger: GGGAAGCTCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATCTGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TTTTCTTCCTGGGCAGTGAACGCTTCTTCAAAGTCATCATGCTTCTaGAGGAGGGCTTCCACGCTGCCCACTGAGTTCCCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FSSWAVNASSKSSCF*RRASTLPTEFPRSS
Trigger: TGAAGACCTGGGGAACTCAGTGGGCAGCGTGGAAGCCCTCCTTCAGAAGCATGATGACTTTGAAGAAGCGTTCACTGCCCAGGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp AGCCTCTTCAGGGAATTCCAGCGGGTGTTCAACTCCTGTCGAATGTaGGCTCCTTCTGGGGTTAGGAGCTCTTCAAAGAGCAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: SLFREFQRVFNSCRM*APSGVRSSSKSSSS
Trigger: TGACGAACTGCTCTTTGAAGAGCTCCTAACCCCAGAAGGAGCTCACATTCGACAGGAGTTGAACACCCGCTGGAATTCCCTGAAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp GTCTCCTGGATCCACGCCTCCTCATCTTCCGAGTCTCTGCAAATCTaGTGTAGCTTGAGTAGGTCAATGAGCTTCTTCTTCCGAATGGCC +
Preference number: 5 (lower is better)
Translates to: VSWIHASSSSESLQI*CSLSRSMSFFFRMA
Trigger: GGCCATTCGGAAGAAGAAGCTCATTGACCTACTCAAGCTACAGCAGATTTGCAGAGACTCGGAAGATGAGGAGGCGTGGATCCAGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTATGTCATCGTGATGCTCCTGGTGTCGCTCCAGCAAGATCTCTGTaGCAGTTAAGTCCTCAGCCAGCTCAGGTGATGATATCACACCGC +
Preference number: 5 (lower is better)
Translates to: LCHRDAPGVAPARSL*QLSPQPAQVMISHR
Trigger: GCGGTGTGATATCATCACCTGAGCTGGCTGAGGACTTAACTGGCACAGAGATCTTGCTGGAGCGACACCAGGAGCATCACGATGACATAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp GAAAGCCAGAACTCAAAGTCCCGGATGCTTGTGTTGAACCTTTGCTaGCGACTGGCCTCGTTGAGCTTCTGTCCTTTGTCAGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: ESQNSKSRMLVLNLC*RLASLSFCPLSVVL
Trigger: GAGAACCACTGACAAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp GCCTCGTCCACTGGTGCTGCCTGCTGTTGCTGGCAGACTTCTGCCTaGTCTCTTAGAGCCTTTATGCTGTTTTCAAATGCATTCAGATCC +
Preference number: 5 (lower is better)
Translates to: ASSTGAACCCWQTSA*SLRAFMLFSNAFRS
Trigger: GGATCTGAATGCATTTGAAAACAGCATAAAGGCTCTAAGAGATCAGGCAGAAGTCTGCCAGCAACAGCAGGCAGCACCAGTGGACGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp GGAGGCGAGCAGCAATCTCTTCCTTGGCATAGTGGTCATTGTCTATaGGCCTTGTGGCAACGTTCTCTAGGTCCGAAATCTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GGEQQSLPWHSGHCL*ALWQRSLGPKSSLP
Trigger: AGGAAGGGAAGATTTCGGACCTAGAGAACGTTGCCACAAGGCTCATAGACAATGACCACTATGCCAAGGAAGAGATTGCTGCTCGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp AAGTCCCACTGGAGATCAGCTCCTGAGCCAGGTCATTCAGATCTTTaGGAGGGTCCTCTCGTGCCAACATCTCTGCTTCCAATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: KSHWRSAPEPGHSDL*EGPLVPTSLLPIAD
Trigger: ATCAGCTATTGGAAGCAGAGATGTTGGCACGAGAGGACCCTCTCAAAGATCTGAATGACCTGGCTCAGGAGCTGATCTCCAGTGGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TCCTTCAGCTCAGCGATTTCAGAAAGCCTTTCTTGCTGGAAGCTCTaGAGACTGGCATCCAGTGTGTCGTGCTTTGCCAGTAGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SFSSAISESLSCWKL*RLASSVSCFASSVR
Trigger: CCTCACACTACTGGCAAAGCACGACACACTGGATGCCAGTCTTCAGAGCTTCCAGCAAGAAAGGCTTTCTGAAATCGCTGAGCTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp ACGCTTCTTCAAAGTCATCATGCTTCTGAAGGAGGGCTTCCACGCTaGCCACTGAGTTCCCCAGGTCTTCATTTTCCAGGAAAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLLQSHHASEGGLPR*PLSSPGLHFPGKPL
Trigger: AAGAGGCTTTCCTGGAAAATGAAGACCTGGGGAACTCAGTGGGCAGCGTGGAAGCCCTCCTTCAGAAGCATGATGACTTTGAAGAAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TCTGAAAGCCAGAACTCAAAGTCCCGGATGCTTGTGTTGAACCTTTaGTGCCGACTGGCCTCGTTGAGCTTCTGTCCTTTGTCAGTGGTT +
Preference number: 5 (lower is better)
Translates to: SESQNSKSRMLVLNL*CRLASLSFCPLSVV
Trigger: AACCACTGACAAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGGCTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TCCTTGAACCTCTGGTACTGGTTTAACACCTCCGCTCTTCGGTGTTaGATTTCTTCTGCTGTTTCTAGGACCTTTGGTCCGCTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: SLNLWYWFNTSALRC*ISSAVSRTFGPLLS
Trigger: CGAGAGCAGCGGACCAAAGGTCCTAGAAACAGCAGAAGAAATCCAACACCGAAGAGCGGAGGTGTTAAACCAGTACCAGAGGTTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp AGGCGAAGTTGCTTCAGATGGGTCTTGGTGGCTTCATGGGCAAAATaGTCTTCTGCAAATCGAGCTTCCCTGATTTCCTCCAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RRSCFRWVLVASWAK*SSANRASLISSSSG
Trigger: TCCTGAGCTGGAGGAAATCAGGGAAGCTCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp GTCAACTCCAAGAGCAGATCCCACAGCAGGCGAAGTTGCTTCAGATaGGTCTTGGTGGCTTCATGGGCAAAATGGTCTTCTGCAAATCGA +
Preference number: 5 (lower is better)
Translates to: VNSKSRSHSRRSCFR*VLVASWAKWSSANR
Trigger: TCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATCTGCTCTTGGAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp CAAGGATCAGAGCCTCTTCCATGCTGTCCCCCAGGTCTTCAATCTTaGTCAGATGGCGCTTCATTGCCTGGATCTCCTTCTGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: QGSEPLPCCPPGLQS*SDGASLPGSPSVSF
Trigger: AAAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGGAAGAGGCTCTGATCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TCCAAATCATCCCGTTTCTTCATCAAAGCCTGCAGACTGTTTAAGTaGTCCCTGTCGTCTGACCTCAGGGAATTCTCACGGGCCACCATC +
Preference number: 5 (lower is better)
Translates to: SKSSRFFIKACRLFK*SLSSDLREFSRATI
Trigger: GATGGTGGCCCGTGAGAATTCCCTGAGGTCAGACGACAGGGATCACTTAAACAGTCTGCAGGCTTTGATGAAGAAACGGGATGATTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TCTTCTATCTGGTCAATGTTGAAAGTCCCACTGGAGATCAGCTCCTaGGCCAGGTCATTCAGATCTTTGAGAGGGTCCTCTCGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: SSIWSMLKVPLEISS*ARSFRSLRGSSRAN
Trigger: GTTGGCACGAGAGGACCCTCTCAAAGATCTGAATGACCTGGCTCAGGAGCTGATCTCCAGTGGGACTTTCAACATTGACCAGATAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp CCGACCCCGTGGATCCATATATTGCTGCATATGTATGGTACAGAATaGCACTTGTTCCGGGGTGAGAGCCTGTTTCATGTCCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PTPWIHILLHMYGTE*HLFRGESLFHVLLG
Trigger: ACCAAGGAGGACATGAAACAGGCTCTCACCCCGGAACAAGTGTCATTCTGTACCATACATATGCAGCAATATATGGATCCACGGGGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp GGTGCTGACACTTGTCCCACAGTTCCAGCAGAGCAGCCCAGTCATTaGCAAGTATTGTCATCTTCTCTCGAATTTCCTCAGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: GADTCPTVPAEQPSH*QVLSSSLEFPQKLR
Trigger: ACGAAGCTTCTGAGGAAATTCGAGAGAAGATGACAATACTTGCCAATGACTGGGCTGCTCTGCTGGAACTGTGGGACAAGTGTCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TTCTCCTCTATCCAGGCTTCCTCATCATCCAGGTCTTGGAAGAACTaGAACAAGGCATACGTCTCTTTCAGCTTCTCGTGGTGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: FSSIQASSSSRSWKN*NKAYVSFSFSWCAA
Trigger: AGCTGCACACCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAGTTCTTCCAAGACCTGGATGATGAGGAAGCCTGGATAGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCAAAGACTTCATGTaGCCTCTGGAGGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLKDFM*PLEGLD
Trigger: GTCCAGGCCCTCCAGAGGCAACATGAAGTCTTTGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATGCCGACTGGCCTCGTaGAGCTTCTGTCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLCRLAS*SFCPLS
Trigger: TGACAAAGGACAGAAGCTCAACGAGGCCAGTCGGCA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCCCGGATGCTTGTGTaGAACCTTTGCTGCCGACTG +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSRMLV*NLCCRL
Trigger: CAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAAGATGCCTCCAGCAGTaGTTCCCAGTGCCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLRCLQQ*FPVPQQ
Trigger: TTGCTGAGGCACTGGGAACAACTGCTGGAGGCATCT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAGTCGTAGCCAGCAGGTaGGCTCCGACCCCGTGGATC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTVVASR*APTPWI
Trigger: GATCCACGGGGTCGGAGCCAACCTGCTGGCTACGAC...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp CTGGGGTTAGGAGCTCTTCAAAGAGCAGTTCGTCAGCCACTTTGTTaGTGTCCTTTAGCCGAGGCTCATTACTCTTTAGATCCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LGLGALQRAVRQPLC*CPLAEAHYSLDPSG
Trigger: TCCAGAGGGATCTAAAGAGTAATGAGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGAACTGCTCTTTGAAGAGCTCCTAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TCTTTGAGAGGGTCCTCTCGTGCCAACATCTCTGCTTCCAATAGCTaGTGCTTCTTAAGTAGGTTTCCTGCTGAAGTTAAGTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLRGSSRANISASNS*CFLSRFPAEVKSLA
Trigger: GGCCAGGGACTTAACTTCAGCAGGAAACCTACTTAAGAAGCATCAGCTATTGGAAGCAGAGATGTTGGCACGAGAGGACCCTCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTGAATCTGAGGTGCATCTGCAGAATGGGAAATCATCAGCTTGTCTaGTTTGGCACACAACTCCTTCACCTTGTCATCCATGACCGCGAG +
Preference number: 5 (lower is better)
Translates to: LNLRCICRMGNHQLV*FGTQLLHLVIHDRE
Trigger: CTCGCGGTCATGGATGACAAGGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGATGATTTCCCATTCTGCAGATGCACCTCAGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp AGTGTTTTCTGTCTTTTTCTCTTGGATCCACTCCAACATGTCTCCTaGCTCATAGGCCAGCAGAAACTCATTGTAGCGCTGCAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: SVFCLFLLDPLQHVS*LIGQQKLIVALQQA
Trigger: CGCTTGCTGCAGCGCTACAATGAGTTTCTGCTGGCCTATGAGGCAGGAGACATGTTGGAGTGGATCCAAGAGAAAAAGACAGAAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTCCTTGACATCATCTGCTTCCCTGTGAAACATCTCAACAGCATGTaGACTGCTGAGCAGCTGATACTGTTCATCTGCCAGCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FLDIICFPVKHLNSM*TAEQLILFICQPLQ
Trigger: CTGAAGAGGCTGGCAGATGAACAGTATCAGCTGCTCAGCAGTGCACATGCTGTTGAGATGTTTCACAGGGAAGCAGATGATGTCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CTGGAACAAGGCATACGTCTCTTTCAGCTTCTCGTGGTGTGCAGCTaGCAAGCTCTGGACATTTTCAAAGCGCTCATTGACACCATTCAT +
Preference number: 5 (lower is better)
Translates to: LEQGIRLFQLLVVCS*QALDIFKALIDTIH
Trigger: ATGAATGGTGTCAATGAGCGCTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp GAGAGCCTGTTTCATGTCCTCCTTGGTAATATAGGCCTTGCCTTCTaGCAGAGCTTGGAATGCACTCTCTATGTCATCGCTGGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: ESLFHVLLGNIGLAF*QSLECTLYVIAGLD
Trigger: ATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAGGCAAGGCCTATATTACCAAGGAGGACATGAAACAGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp ATCCATGCTTCTGCTTCATGCAGATCTGCCAGGTACTGTTGGAGCTaGACATTGGCCTTAAGATCATTCTCCCGTCTAATAGCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: IHASASCRSARYCWS*TLALRSFSRLIARA
Trigger: TGCTCGAGCTATTAGACGGGAGAATGATCTTAAGGCCAATGTCCAGCTCCAACAGTACCTGGCAGATCTGCATGAAGCAGAAGCATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TCTTGGAAGAACTGGAACAAGGCATACGTCTCTTTCAGCTTCTCGTaGTGTGCAGCTGCCAAGCTCTGGACATTTTCAAAGCGCTCATTG +
Preference number: 5 (lower is better)
Translates to: SWKNWNKAYVSFSFS*CAAAKLWTFSKRSL
Trigger: CAATGAGCGCTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAGTTCTTCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp CGTAACAACTTCTCCTCTATCCAGGCTTCCTCATCATCCAGGTCTTaGAAGAACTGGAACAAGGCATACGTCTCTTTCAGCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RNNFSSIQASSSSRS*KNWNKAYVSFSFSW
Trigger: CCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAGTTCTTCCAAGACCTGGATGATGAGGAAGCCTGGATAGAGGAGAAGTTGTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp AGGCATGCACATCGTCCAGTTGTGACTTCCAAGCAGCTAATGCCTTaGCCAAAGAGGCTGTCTTTTCATTCAGAACTTGGATCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RHAHRPVVTSKQLMP*PKRLSFHSELGSWW
Trigger: CCACCAAGATCCAAGTTCTGAATGAAAAGACAGCCTCTTTGGCCAAGGCATTAGCTGCTTGGAAGTCACAACTGGACGATGTGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp AGAGCCTCTTCCATGCTGTCCCCCAGGTCTTCAATCTTGGTCAGATaGCGCTTCATTGCCTGGATCTCCTTCTGTTTCCTTTTATTTGCT +
Preference number: 5 (lower is better)
Translates to: RASSMLSPRSSILVR*RFIAWISFCFLLFA
Trigger: AGCAAATAAAAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGGAAGAGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCCCTTTTTGTGCTGTaGCCTCCAGCAACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSLFVL*PPATPS
Trigger: GGAAGGAGTTGCTGGAGGCAACAGCACAAAAAGGGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAATAGTTGAAATCCTCTaGAGCCCCAGCCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLIVEIL*SPSQRG
Trigger: GCCTCTCTGGCTGGGGCTCAAGAGGATTTCAACTAT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCCTGTTCCCTTTCCTaGATGATGTCTGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSCSLS*MMSGRW
Trigger: CCACCTGCCAGACATCATCAAGGAAAGGGAACAGGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TTGTGGCAACGTTCTCTAGGTCCGAAATCTTCCCTTCCTGGGCAGTaGTTGCTTTGTCCAAATCATCCCGTTTCTTCATCAAAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: LWQRSLGPKSSLPGQ*LLCPNHPVSSSKPA
Trigger: TGCAGGCTTTGATGAAGAAACGGGATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTCGGACCTAGAGAACGTTGCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TGTTGCTCCAAATTGTGTTGCATTCGCATCCCTAGTTGGTGCAGCTaGTCCCATTGCTGGGCCAGTCCAATGGTGCTGTATTTGATATCA +
Preference number: 5 (lower is better)
Translates to: CCSKLCCIRIPSWCS*SHCWASPMVLYLIS
Trigger: TGATATCAAATACAGCACCATTGGACTGGCCCAGCAATGGGATCAGCTGCACCAACTAGGGATGCGAATGCAACACAATTTGGAGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CCTGCTGTTGCTGGCAGACTTCTGCCTGATCTCTTAGAGCCTTTATaGTGTTTTCAAATGCATTCAGATCCACCAGGAAGGCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: PAVAGRLLPDLLEPL*CFQMHSDPPGRLHA
Trigger: AGCATGAAGCCTTCCTGGTGGATCTGAATGCATTTGAAAACAGCATAAAGGCTCTAAGAGATCAGGCAGAAGTCTGCCAGCAACAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CATGCTGTCCCCCAGGTCTTCAATCTTGGTCAGATGGCGCTTCATTaGCTGGATCTCCTTCTGTTTCCTTTTATTTGCTTCAAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: HAVPQVFNLGQMALH*LDLLLFPFICFKLG
Trigger: TCCCAACTTGAAGCAAATAAAAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TCTGGTAACTTAGGATGTTTCTCCTGGGCACACTCATTAGCATATTaGTTCACTCTGTCCACTTTTCCCTTCCGAGCGGTCAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGNLGCFSWAHSLAY*FTLSTFPFRAVSSS
Trigger: GGAAGAACTGACCGCTCGGAAGGGAAAAGTGGACAGAGTGAACCAATATGCTAATGAGTGTGCCCAGGAGAAACATCCTAAGTTACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TCCTCCATCCACTGGATAGCTTCATTGACATCCCTTTTAAATCGCTaGAGGTCTGCTGCATTAGACAGACTTTCTCGTCTCTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSIHWIASLTSLLNR*RSAALDRLSRLLRA
Trigger: GGCTCTCAAGAGACGAGAAAGTCTGTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGATGTCAATGAAGCTATCCAGTGGATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp CTGTCCCCCAGGTCTTCAATCTTGGTCAGATGGCGCTTCATTGCCTaGATCTCCTTCTGTTTCCTTTTATTTGCTTCAAGTTGGGATTCC +
Preference number: 5 (lower is better)
Translates to: LSPRSSILVRWRFIA*ISFCFLLFASSWDS
Trigger: GGAATCCCAACTTGAAGCAAATAAAAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTCCGCTCTTCGGTGTaGGATTTCTTCTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLRSSV*DFFCCF
Trigger: GAAACAGCAGAAGAAATCCAACACCGAAGAGCGGAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAATCAGCTTGTCTGCTTaGGCACACAACTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLISLSA*AHNSFT
Trigger: GGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGAT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGCAGCTCATCAGCATaGATCAGAGCAGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGSSSA*IRAVFS
Trigger: GGAAAAGACTGCTCTGATCAATGCTGATGAGCTGCC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGTCTTCGCCAACTCTTaGAGCTTTTCCCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLVFANS*SFSQCW
Trigger: CCAACACTGGGAAAAGCTCAAAGAGTTGGCGAAGAC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp ATTGAGAGCCCGGCATTTCTTATCAATCTGTTCCTTGACATCATCTaGTTCCCTGTGAAACATCTCAACAGCATGTGCACTGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: IESPAFLINLFLDII*FPVKHLNSMCTAEQ
Trigger: CTGCTCAGCAGTGCACATGCTGTTGAGATGTTTCACAGGGAAGCAGATGATGTCAAGGAACAGATTGATAAGAAATGCCGGGCTCTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp ATGAGCCTTGTGGCAACGTTCTCTAGGTCCGAAATCTTCCCTTCCTaGGCAGTGATTGCTTTGTCCAAATCATCCCGTTTCTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: MSLVATFSRSEIFPS*AVIALSKSSRFFIK
Trigger: TTTGATGAAGAAACGGGATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTCGGACCTAGAGAACGTTGCCACAAGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp GCATACGTCTCTTTCAGCTTCTCGTGGTGTGCAGCTGCCAAGCTCTaGACATTTTCAAAGCGCTCATTGACACCATTCATTTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AYVSFSFSWCAAAKL*TFSKRSLTPFIFSS
Trigger: AGAAGAGAAAATGAATGGTGTCAATGAGCGCTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGAGACGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAAGAGCAGCCCAGTCATaGGCAAGTATTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLRAAQS*ASIVIF
Trigger: GAAGATGACAATACTTGCCAATGACTGGGCTGCTCT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTCCAGGAAAGCCTCTaGTCTGCTCATCCAACTATC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFQESL*SAHPTI
Trigger: GATAGTTGGATGAGCAGACAAGAGGCTTTCCTGGAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGGTGCTGCCTGCTGTaGCTGGCAGACTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRWCCLL*LADFCL
Trigger: CAGGCAGAAGTCTGCCAGCAACAGCAGGCAGCACCA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATGCTCAGCACGACCGTaGACTTCATTTTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLCSARP*TSFSKA
Trigger: AGCCTTTGAAAATGAAGTCAACGGTCGTGCTGAGCA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGAAGGCACTGGCATTTaGTTCAAACTCCTGGCACAT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLEGTGI*FKLLAH
Trigger: ATGTGCCAGGAGTTTGAACAAAATGCCAGTGCCTTC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp TCCTTTTATTTGCTTCAAGTTGGGATTCCAGAGTTCCTGTTTCCTTaGGCAATGATCCATCCAGAAAATAGGCCCTGGTCTCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SFYLLQVGIPEFLFP*AMIHPENRPWSPGS
Trigger: GGATCCAGGAGACCAGGGCCTATTTTCTGGATGGATCATTGCTCAAGGAAACAGGAACTCTGGAATCCCAACTTGAAGCAAATAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAACACTCCTGAGAATATaGATAGAACTTCAGTGCCCG +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLTLLRI*IELQCP
Trigger: CGGGCACTGAAGTTCTATCAATATTCTCAGGAGTGT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAGGAGTTCTTGACCAGTaGCATCAGCAGATTGAAATC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLGVLDQ*HQQIEI
Trigger: GATTTCAATCTGCTGATGCAACTGGTCAAGAACTCC...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAAACTCCTTCCAGAGGTaGGCAACCTCACTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTNSFQR*ATSLRR
Trigger: TCGCCTGAGTGAGGTTGCCAACCTCTGGAAGGAGTT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTCAGGTCTTCTGCATaGTTCTCAAACTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFRSSA*FSNCSS
Trigger: GCTGCTACAGTTTGAGAACAATGCAGAAGACCTGAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGCAAGGATTCCTGCCTaGCACGGATGTCCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRARIPA*HGCPQS
Trigger: ACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAAAGGCTTCATGCTTCTaGAGAAGGGCCCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTKASCF*RRAPAA
Trigger: AGCAGCTGGGGCCCTTCTCAAGAAGCATGAAGCCTT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATCTAGATCACTGGCCTaGCTAAGGAAGAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLSRSLA*LRKRKN
Trigger: ATTCTTCCTCTTCCTTAGCAAGGCCAGTGATCTAGA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGCTCCTCAATGGCTTaGGCTTGGCTGTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTCSSMA*AWLCSP
Trigger: TGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGTGCAGCTGATCCCATaGCTGGGCCAGTCCAATGGT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRVQLIP*LGQSNG
Trigger: ACCATTGGACTGGCCCAGCAATGGGATCAGCTGCAC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTGTCTACAATGGGTTCTTTCTCTTTAATCCATGCTTCTGCTTCATaGAGATCTGCCAGGTACTGTTGGAGCTGGACATTGGCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LSTMGSFSLIHASAS*RSARYCWSWTLALR
Trigger: TCTTAAGGCCAATGTCCAGCTCCAACAGTACCTGGCAGATCTGCATGAAGCAGAAGCATGGATTAAAGAGAAAGAACCCATTGTAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTACTGTTTAGAAGATTCTaGGCTGCAACCAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLLFRRF*AATKSF
Trigger: AAAGGACTTGGTTGCAGCCAAGAATCTTCTAAACAG...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATCTGCCAGGTACTGTaGGAGCTGGACATTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTICQVL*ELDIGL
Trigger: AAGGCCAATGTCCAGCTCCAACAGTACCTGGCAGAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTCTGTCTTTTTCTCTaGGATCCACTCCAACATGTC +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFCLFL*DPLQHV
Trigger: GACATGTTGGAGTGGATCCAAGAGAAAAAGACAGAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATCGTCAGCCACTTTGTaGATGTCCTTTAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTSSATL*MSFSRG
Trigger: GCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGCTTGTGTTGAACCTTaGCTGCCGACTGGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRACVEP*LPTGLV
Trigger: AACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGTGAGGTCTGCACCGTaGCTCTTGGTCTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRVRSAP*LLVFRL
Trigger: AAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCAC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp CTTCTGCCAGAGCTTGGAATGCACTCTCTATGTCATCGCTGGTCTTaGTATTCTCTGACTCCTTGTCAATCAGGAATGATGTATAGTCTT +
Preference number: 5 (lower is better)
Translates to: LLPELGMHSLCHRWS*YSLTPCQSGMMYSL
Trigger: AAGACTATACATCATTCCTGATTGACAAGGAGTCAGAGAATATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp TTCCTCAGAAGCTTCGTGATTGCCATCCAGGAGTTCTTGACCAGTTaGATCAGCAGATTGAAATCGATCATCATAAGAGTCAATCTCATG +
Preference number: 5 (lower is better)
Translates to: FLRSFVIAIQEFLTS*ISRLKSIIIRVNLM
Trigger: CATGAGATTGACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp CAAGTATTGTCATCTTCTCTCGAATTTCCTCAGAAGCTTCGTGATTaGCATCCAGGAGTTCTTGACCAGTTGCATCAGCAGATTGAAATC +
Preference number: 5 (lower is better)
Translates to: QVLSSSLEFPQKLRD*HPGVLDQLHQQIEI
Trigger: GATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAAATTCGAGAGAAGATGACAATACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TCATCCTGTTTTGCCTTTATCTCTGGTAACTTAGGATGTTTCTCCTaGGCACACTCATTAGCATATTGGTTCACTCTGTCCACTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SSCFAFISGNLGCFS*AHSLAYWFTLSTFP
Trigger: GGGAAAAGTGGACAGAGTGAACCAATATGCTAATGAGTGTGCCCAGGAGAAACATCCTAAGTTACCAGAGATAAAGGCAAAACAGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TGGACATTGGCCTTAAGATCATTCTCCCGTCTAATAGCTCGAGCATaGAGAGACTCCATATTTTTGTTCAAGCTTTCAACCCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: WTLALRSFSRLIARA*RDSIFLFKLSTLDA
Trigger: AGCATCTAGGGTTGAAAGCTTGAACAAAAATATGGAGTCTCTCCATGCTCGAGCTATTAGACGGGAGAATGATCTTAAGGCCAATGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAACACTCATTAGCATATaGGTTCACTCTGTCCACTTT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLTLISI*VHSVHF
Trigger: AAAGTGGACAGAGTGAACCAATATGCTAATGAGTGT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACGATCCCAGGCAGCATaGACTTCATCCTGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRRSQAA*TSSCFA
Trigger: GGCAAAACAGGATGAAGTCAATGCTGCCTGGGATCG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACACAACTCCTTCACCTaGTCATCCATGACCGCGAGA +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRHNSFT*SSMTAR
Trigger: TCTCGCGGTCATGGATGACAAGGTGAAGGAGTTGTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAACCTTCCACCAGTCCTaGTTGATGGAACTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTTFHQS*LMELSR
Trigger: TCTGCTCAGTTCCATCAACAAGGACTGGTGGAAGGT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAGGTCATTCAGATCTTaGAGAGGGTCCTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRRSFRS*RGSSRA
Trigger: GGCACGAGAGGACCCTCTCAAAGATCTGAATGACCT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 90 bp AGCGATATTCTCAGAGTCATAGTGGTCATTGTCAATAAGCTTGGTTaGAGTCTCATCCAAGGTTATGATCTTTTCTTCCTGGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SDILRVIVVIVNKLG*SLIQGYDLFFLGSE
Trigger: TTCACTGCCCAGGAAGAAAAGATCATAACCTTGGATGAGACTGCAACCAAGCTTATTGACAATGACCACTATGACTCTGAGAATATCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp GAATTAATATTCTGGAGAGTATTGTCAATTTCACGTCTGTTACGGTaGCCGCTGTCTATAAGTTCTGTACCAAAGTCTTCTAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ELIFWRVLSISRLLR*PLSISSVPKSSKAW
Trigger: CCAGGCCTTAGAAGACTTTGGTACAGAACTTATAGACAGCGGCCACCGTAACAGACGTGAAATTGACAATACTCTCCAGAATATTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGGGAAATCATCAGCTaGTCTGCTTTGGCACACAAC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTWEIIS*SALAHN
Trigger: GTTGTGTGCCAAAGCAGACAAGCTGATGATTTCCCA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTAAGAGACTCCATATTTTaGTTCAAGCTTTCAACCCTA +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLRDSIF*FKLSTL
Trigger: TAGGGTTGAAAGCTTGAACAAAAATATGGAGTCTCT...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATGTTGGAGCTGGACATaGGCCTTAAGATCATTCTCC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTCWSWT*ALRSFS
Trigger: GGAGAATGATCTTAAGGCCAATGTCCAGCTCCAACA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CGCTTGCTTGTGCCTCTTATCCCCCATTACTTGCTGCCACACTATGATTTTCTATTTTCAAAGCGCTCATaGACACCATTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RLLVPLIPHYLLPHYDFLFSKRS*TPFIFS
Trigger: AGAGAAAATGAATGGTGTCAATGAGCGCTTTGAAAA...TAGAAAATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACTCATCATCCAGGTCTaGGAAGAACTGGAACAAGGC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLIIQV*EELEQG
Trigger: GCCTTGTTCCAGTTCTTCCAAGACCTGGATGATGAG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACAAGCAGCTAATGCCTaGGCCAAAGAGGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRQAANA*AKEAVF
Trigger: AAAGACAGCCTCTTTGGCCAAGGCATTAGCTGCTTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCAGATGGCGCTTCATaGCCTGGATCTCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSDGAS*PGSPSV
Trigger: AACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAAGGAATTTCTCAAACTaGGGCTCAGGTTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTRNFSN*GSGSPS
Trigger: GGAAGGTGAACCTGAGCCCAAGTTTGAGAAATTCCT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATAGCTTCCTTCTCTTaGACCCACTCTAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTIASFS*THSRMS
Trigger: AGACATCCTAGAGTGGGTCAAAGAGAAGGAAGCTAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACATCCAACTATCCACTaGTTCACTGTCTCGGTAGAA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTHPTIH*FTVSVE
Trigger: TTCTACCGAGACAGTGAACAAGTGGATAGTTGGATG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCTTCCTCCACCATTTaGTTTCCCCTCTCTGTTATT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPSSTI*FPLSVI
Trigger: AATAACAGAGAGGGGAAACAAAATGGTGGAGGAAGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATGGGCAGTGATTGCTTaGTCCAAATCATCCCGTTTC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRWAVIA*SKSSRF
Trigger: GAAACGGGATGATTTGGACAAAGCAATCACTGCCCA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTGAGCTTCTGTCCTTaGTCAGTGGTTCTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLSFCP*SVVLSR
Trigger: CCTAGAGAGAACCACTGACAAAGGACAGAAGCTCAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCTTGTACCCGGTTCTaGTGCACAGCAAAGTCATTC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSCTRF*CTAKSF
Trigger: GAATGACTTTGCTGTGCACAAGAACCGGGTACAAGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCAATGGTGCTGTATTaGATATCAAGGATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPMVLY*ISRIRA
Trigger: GGCTCTGATCCTTGATATCAAATACAGCACCATTGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAGTCTCTCCTGAAAACTaGATAGTGGTAAGACTCCTC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRVSPEN*IVVRLL
Trigger: GAGGAGTCTTACCACTATCAAGTTTTCAGGAGAGAC...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACACATTTCAAAGTTCTaGATCTGCCTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTHISKF*ICLASS
Trigger: AGAAGAGGCTAGGCAGATCAAGAACTTTGAAATGTG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAGAGTTCCTGTTTCCTaGAGCAATGATCCATCCAGA +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRRVPVS*SNDPSR
Trigger: TCTGGATGGATCATTGCTCAAGGAAACAGGAACTCT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAATCTGTTGCTCCAAATaGTGTTGCATTCGCATCCCT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRICCSK*CCIRIP
Trigger: AGGGATGCGAATGCAACACAATTTGGAGCAACAGAT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAATGTCATCGCTGGTCTaGATATTCTCTGACTCCTTG +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRMSSLV*IFSDSL
Trigger: CAAGGAGTCAGAGAATATCAAGACCAGCGATGACAT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACACCGTGGATCCATATATaGCTGCATATGTATGGTACA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTPWIHI*LHMYGT
Trigger: TGTACCATACATATGCAGCAATATATGGATCCACGG...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 90 bp ACTCTTGATTTGGCTTGCACCTCTGATACAAAGGATTCGTGCTTCTaGTATTTCCCCTGTATGTTTGTGGGTTCATATGTCTTATCTTTT +
Preference number: 5 (lower is better)
Translates to: TLDLACTSDTKDSCF*YFPCMFVGSYVLSF
Trigger: AAAAGATAAGACATATGAACCCACAAACATACAGGGGAAATATCAGAAGCACGAATCCTTTGTATCAGAGGTGCAAGCCAAATCAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 90 bp TTTTCCCAACTCTTTTCCAAATTGTCTCTCTTTGAATTAATATTCTaGAGAGTATTGTCAATTTCACGTCTGTTACGGTGGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FSQLFSKLSLFELIF*RVLSISRLLRWPLS
Trigger: AGACAGCGGCCACCGTAACAGACGTGAAATTGACAATACTCTCCAGAATATTAATTCAAAGAGAGACAATTTGGAAAAGAGTTGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACACTGGATAGCTTCATaGACATCCCTTTTAAATCGC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRHWIAS*TSLLNR
Trigger: GCGATTTAAAAGGGATGTCAATGAAGCTATCCAGTG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAATCCAATTTCATCTGTaGAATCTGAGGTGCATCTGC +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRIQFHL*NLRCIC
Trigger: GCAGATGCACCTCAGATTCAACAGATGAAATTGGAT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGACCTCTCTGTTATTACTaGAATCCGTGGTTCATGACT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRPLCYY*NPWFMT
Trigger: AGTCATGAACCACGGATTCAAGTAATAACAGAGAGG...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTATCAATCTGTTCCTaGACATCATCTGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLSICS*TSSASL
Trigger: CAGGGAAGCAGATGATGTCAAGGAACAGATTGATAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTCAGAACTTGGATCTaGGTGGAAATCTTATCCTTG +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFRTWI*VEILSL
Trigger: CAAGGATAAGATTTCCACCAAGATCCAAGTTCTGAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTATTTGCTTCAAGTaGGGATTCCAGAGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFICFK*GFQSSC
Trigger: ACAGGAACTCTGGAATCCCAACTTGAAGCAAATAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACATTTGGCTTGAATCTGTaGCTCCAAATTGTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTFGLNL*LQIVLH
Trigger: ATGCAACACAATTTGGAGCAACAGATTCAAGCCAAA...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATTTCCCCTGTATGTTaGTGGGTTCATATGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTISPVC*WVHMSY
Trigger: ATAAGACATATGAACCCACAAACATACAGGGGAAAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATTGAAGGCTGAAGCTTaGTGTGCAAATTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRLKAEA*CANSMN
Trigger: ATTCATGGAATTTGCACACAAAGCTTCAGCCTTCAA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATATGGTGTCTTTGGCTaGAATCTGTTGCTCCAAATT +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRYGVFG*NLLLQI
Trigger: AATTTGGAGCAACAGATTCAAGCCAAAGACACCATA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp TCAGAATGCAGTAAAATCTTAAAGGTGTGCAGCACACACACACATACACATACAATATTCTCTGACTCCTaGTCAATCAGGAATGATGTA +
Preference number: 5 (lower is better)
Translates to: SECSKILKVCSTHTHTHTIFSDS*SIRNDV
Trigger: TACATCATTCCTGATTGACAAGGAGTCAGAGAATAT...TGTATGTGTATGTGTGTGTGTGCTGCACACCTTTAAGATTTTACTGCATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGAAGTTGCATCAGCAGATaGAAATCGATCATCATAAGA +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSCISR*KSIIIR
Trigger: TCTTATGATGATCGATTTCAATCTGCTGATGCAACT...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS-3UTR CAA 90 bp CCTGACATGCCAAAGTCATTCACTTTAATGGTGAAATATCAAAACAGGACAAGATCTGTTTCCTTTTATTaGCTTCAAGTTGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: PDMPKSFTLMVKYQNRTRSVSFY*LQVGIP
Trigger: TGGAATCCCAACTTGAAGCAAATAAAAGGAAACAGA...TCTTGTCCTGTTTTGATATTTCACCATTAAAGTGAATGACTTTGGCATGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AGCTATGACCCTAGCTTCTCGACCAGCCTCGTCCACTaGTGCTGCCTGCTGTTGCTGGCAGACTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SYDPSFSTSLVH*CCLLLLADFCL
Trigger: CAGGCAGAAGTCTGCCAGCAACAGCAGGCAGCACCAGTGGACGAGGCTGGTCGAGAAGCTAGGGTCATAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp CCCAGTGCCTCAGCAAGGCTGCATGCTGCTCCTCAATaGCTTTGGCTTGGCTGTGCTCACCAGCCACAAGCT +
Preference number: 6 (lower is better)
Translates to: PSASARLHAAPQ*LWLGCAHQPQA
Trigger: AGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TGCCTCAGCAAGGCTGCATGCTGCTCCTCAATGGCTTaGGCTTGGCTGTGCTCACCAGCCACAAGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: CLSKAACCSSMA*AWLCSPATSWS
Trigger: GGACCAGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CCAGTGCCTCAGCAAGGCTGCATGCTGCTCCTCAATGGCTTTGGCTaGGCTGTGCTCACCAGCCACAAGCTGGTCCTTCAGCTCAGCGAT +
Preference number: 6 (lower is better)
Translates to: PVPQQGCMLLLNGFG*AVLTSHKLVLQLSD
Trigger: ATCGCTGAGCTGAAGGACCAGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TATGACCCTAGCTTCTCGACCAGCCTCGTCCACTGGTaGTGCCTGCTGTTGCTGGCAGACTTCTGCCTGATC +
Preference number: 6 (lower is better)
Translates to: YDPSFSTSLVHW*CLLLLADFCLI
Trigger: GATCAGGCAGAAGTCTGCCAGCAACAGCAGGCAGCACCAGTGGACGAGGCTGGTCGAGAAGCTAGGGTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AGCAAGGCTGCATGCTGCTCCTCAATGGCTTTGGCTTaGCTGTGCTCACCAGCCACAAGCTGGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SKAACCSSMALA*LCSPATSWSFS
Trigger: GCTGAAGGACCAGCTTGTGGCTGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GTCCCCAGAGTCGGGATGGCCTATCTCTTCAAAGTGTaGCGCCATGTCTGTGAGGGTGTCCACCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: VPRVGMAYLFKV*RHVCEGVHLIL
Trigger: CAGAATCAGGTGGACACCCTCACAGACATGGCGGCACACTTTGAAGAGATAGGCCATCCCGACTCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CAGAGCCTCAAAACGGGAAAGCAAGGATTCCTGCCTTaGACGGATGTCCCCAGAGTCGGGATGGCCTATCTC +
Preference number: 6 (lower is better)
Translates to: QSLKTGKQGFLP*TDVPRVGMAYL
Trigger: GAGATAGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TCCTTCAGAGCCTCAAAACGGGAAAGCAAGGATTCCTaGCTTGCACGGATGTCCCCAGAGTCGGGATGGCCT +
Preference number: 6 (lower is better)
Translates to: SFRASKRESKDS*LARMSPESGWP
Trigger: AGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GCAGAAACTCATTGTAGCGCTGCAGCAAGCGACGTCTaGGCTCTTCTGCCCGATCTAGGAGGGAGTGGTACA +
Preference number: 6 (lower is better)
Translates to: AETHCSAAASDV*ALLPDLGGSGT
Trigger: TGTACCACTCCCTCCTAGATCGGGCAGAAGAGCGCAGACGTCGCTTGCTGCAGCGCTACAATGAGTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AGCAGTTGTTCCCAGTGCCTCAGCAAGGCTGCATGCTaGTCCTCAATGGCTTTGGCTTGGCTGTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: SSCSQCLSKAAC*SSMALAWLCSP
Trigger: TGGTGAGCACAGCCAAGCCAAAGCCATTGAGGAGCAGCATGCAGCCTTGCTGAGGCACTGGGAACAACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TGGGCAGTGAACGCTTCTTCAAAGTCATCATGCTTCTaGAGGAGGGCTTCCACGCTGCCCACTGAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: WAVNASSKSSCF*RRASTLPTEFP
Trigger: GGGGAACTCAGTGGGCAGCGTGGAAGCCCTCCTTCAGAAGCATGATGACTTTGAAGAAGCGTTCACTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp CCTCCAAGTTCACCCCTCGGGTCTTCGCCAACTCTTTaGGCTTTTCCCAGTGTTGGACAAACTGAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPSSPLGSSPTL*AFPSVGQTEPA
Trigger: GGCTGGCTCAGTTTGTCCAACACTGGGAAAAGCTCAAAGAGTTGGCGAAGACCCGAGGGGTGAACTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AACTTCAGTGCCCGCAGCAGCACGTCACTTTTCTCTTaGGTCAACTCCAAGAGCAGATCCCACAGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: NFSARSSTSLFS*VNSKSRSHSRR
Trigger: TCGCCTGCTGTGGGATCTGCTCTTGGAGTTGACCCAAGAGAAAAGTGACGTGCTGCTGCGGGCACTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCAGAGCCTCAAAACGGGAAAGCAAGGATTCCTGCCTaGCACGGATGTCCCCAGAGTCGGGATGGCCTATCT +
Preference number: 6 (lower is better)
Translates to: SEPQNGKARIPA*HGCPQSRDGLS
Trigger: AGATAGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GCCAGTAGTGTGAGGAAGGCGGTGAGGTCTGCACCGTaGCTCTTGGTCTTCAGGCTTGCTTCTTTCTCACCT +
Preference number: 6 (lower is better)
Translates to: ASSVRKAVRSAP*LLVFRLASFSP
Trigger: AGGTGAGAAAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCACCGCCTTCCTCACACTACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp GTGGCTCCTTCAGAGCCTCAAAACGGGAAAGCAAGGATTCCTGCCTaGCACGGATGTCCCCAGAGTCGGGATGGCCTATCTCTTCAAAGT +
Preference number: 6 (lower is better)
Translates to: VAPSEPQNGKARIPA*HGCPQSRDGLSLQS
Trigger: ACTTTGAAGAGATAGGCCATCCCGACTCTGGGGACATCCGTGCAAGGCAGGAATCCTTGCTTTCCCGTTTTGAGGCTCTGAAGGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp GCCTGGAAGGTAGGGTCCTCTCTCTTTATGTCATCGTaGTGCTCCTGGTGTCGCTCCAGCAAGATCTCTGTG +
Preference number: 6 (lower is better)
Translates to: AWKVGSSLFMSS*CSWCRSSKISV
Trigger: CACAGAGATCTTGCTGGAGCGACACCAGGAGCATCACGATGACATAAAGAGAGAGGACCCTACCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp GATTCTTGGCTGCAACCAAGTCCTTTCCAAGATGAGTaGAAGCTGCTGAGGGCTCAGTCTCCTGGATCCACG +
Preference number: 6 (lower is better)
Translates to: DSWLQPSPFQDE*KLLRAQSPGST
Trigger: CGTGGATCCAGGAGACTGAGCCCTCAGCAGCTTCCACTCATCTTGGAAAGGACTTGGTTGCAGCCAAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp GAGCCTCTTCCATGCTGTCCCCCAGGTCTTCAATCTTaGTCAGATGGCGCTTCATTGCCTGGATCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: EPLPCCPPGLQS*SDGASLPGSPS
Trigger: AGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGGAAGAGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AGTGTGAGGAAGGCGGTGAGGTCTGCACCGTTGCTCTaGGTCTTCAGGCTTGCTTCTTTCTCACCTATCCAG +
Preference number: 6 (lower is better)
Translates to: SVRKAVRSAPLL*VFRLASFSPIQ
Trigger: CTGGATAGGTGAGAAAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCACCGCCTTCCTCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AGAGCCTCTTCCATGCTGTCCCCCAGGTCTTCAATCTaGGTCAGATGGCGCTTCATTGCCTGGATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RASSMLSPRSSI*VRWRFIAWISF
Trigger: GAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGGAAGAGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CCTTCTGCCTCTGAAAGCCAGAACTCAAAGTCCCGGATGCTTGTGTaGAACCTTTGCTGCCGACTGGCCTCGTTGAGCTTCTGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PSASESQNSKSRMLV*NLCCRLASLSFCPL
Trigger: CAAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGGCTTTCAGAGGCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCGTGCTTTGCCAGTAGTGTGAGGAAGGCGGTGAGGTCTGCACCGTaGCTCTTGGTCTTCAGGCTTGCTTCTTTCTCACCTATCCAGGAT +
Preference number: 6 (lower is better)
Translates to: SCFASSVRKAVRSAP*LLVFRLASFSPIQD
Trigger: ATCCTGGATAGGTGAGAAAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCACCGCCTTCCTCACACTACTGGCAAAGCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp AAGAGATGGAAATCCAGACATTGGCGGTATTGGTGCTaGCACTTGTCCCACAGTTCCAGCAGAGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: KRWKSRHWRYWC*HLSHSSSRAAQ
Trigger: CTGGGCTGCTCTGCTGGAACTGTGGGACAAGTGTCAGCACCAATACCGCCAATGTCTGGATTTCCATCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp AGGGAATTCCAGCGGGTGTTCAACTCCTGTCGAATGTaGGCTCCTTCTGGGGTTAGGAGCTCTTCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: REFQRVFNSCRM*APSGVRSSSKS
Trigger: GCTCTTTGAAGAGCTCCTAACCCCAGAAGGAGCTCACATTCGACAGGAGTTGAACACCCGCTGGAATTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TGGAGATCAGCTCCTGAGCCAGGTCATTCAGATCTTTaGGAGGGTCCTCTCGTGCCAACATCTCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: WRSAPEPGHSDL*EGPLVPTSLLP
Trigger: TGGAAGCAGAGATGTTGGCACGAGAGGACCCTCTCAAAGATCTGAATGACCTGGCTCAGGAGCTGATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CAAAGTCATCATGCTTCTGAAGGAGGGCTTCCACGCTaGCCACTGAGTTCCCCAGGTCTTCATTTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: QSHHASEGGLPR*PLSSPGLHFPG
Trigger: TCCTGGAAAATGAAGACCTGGGGAACTCAGTGGGCAGCGTGGAAGCCCTCCTTCAGAAGCATGATGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AGCATGTGCACTGCTGAGCAGCTGATACTGTTCATCTaGCAGCCTCTTCAGGGAATTCCAGCGGGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: SMCTAEQLILFI*QPLQGIPAGVQ
Trigger: TTGAACACCCGCTGGAATTCCCTGAAGAGGCTGGCAGATGAACAGTATCAGCTGCTCAGCAGTGCACATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CAGAACTCAAAGTCCCGGATGCTTGTGTTGAACCTTTaGTGCCGACTGGCCTCGTTGAGCTTCTGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: QNSKSRMLVLNL*CRLASLSFCPL
Trigger: CAAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CTCTTTCCCTACAGCAGCCTTGTCTCTCAGGCTTTCTaGCGTATCCAGCACATTCTGGACAGCAGGTTCATG +
Preference number: 6 (lower is better)
Translates to: LFPYSSLVSQAF*RIQHILDSRFM
Trigger: CATGAACCTGCTGTCCAGAATGTGCTGGATACGGCAGAAAGCCTGAGAGACAAGGCTGCTGTAGGGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GGTGAGGTCTGCACCGTTGCTCTTGGTCTTCAGGCTTaGTTCTTTCTCACCTATCCAGGATTCCACTACGTC +
Preference number: 6 (lower is better)
Translates to: GEVCTVALGLQA*FFLTYPGFHYV
Trigger: GACGTAGTGGAATCCTGGATAGGTGAGAAAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp CCCACAGCAGGCGAAGTTGCTTCAGATGGGTCTTGGTaGCTTCATGGGCAAAATGGTCTTCTGCAAATCGAG +
Preference number: 6 (lower is better)
Translates to: PTAGEVASDGSW*LHGQNGLLQIE
Trigger: CTCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AGGGAATTCTCACGGGCCACCATCCAGCTCTCGACCTaGTCACACTTTCCTCGGAATAACTGCAGTTCTAAG +
Preference number: 6 (lower is better)
Translates to: REFSRATIQLST*SHFPRNNCSSK
Trigger: CTTAGAACTGCAGTTATTCCGAGGAAAGTGTGACCAGGTCGAGAGCTGGATGGTGGCCCGTGAGAATTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp ATCAGCTTGTCTGCTTTGGCACACAACTCCTTCACCTaGTCATCCATGACCGCGAGATTCCTCTCGAGCCTC +
Preference number: 6 (lower is better)
Translates to: ISLSALAHNSFT*SSMTARFLSSL
Trigger: GAGGCTCGAGAGGAATCTCGCGGTCATGGATGACAAGGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CCAGAACTCAAAGTCCCGGATGCTTGTGTTGAACCTTaGCTGCCGACTGGCCTCGTTGAGCTTCTGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PELKVPDACVEP*LPTGLVELLSF
Trigger: AAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCTGAAAGCCAGAACTCAAAGTCCCGGATGCTTGTGTaGAACCTTTGCTGCCGACTGGCCTCGTTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: SESQNSKSRMLV*NLCCRLASLSF
Trigger: GAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTTCTGGCTTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCCAAGAGCAGATCCCACAGCAGGCGAAGTTGCTTCAGATGGGTCTaGGTGGCTTCATGGGCAAAATGGTCTTCTGCAAATCGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SKSRSHSRRSCFRWV*VASWAKWSSANRAS
Trigger: GGAAGCTCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATCTGCTCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TTCACTGTCTCGGTAGAAGAGATGGAAATCCAGACATTGGCGGTATaGGTGCTGACACTTGTCCCACAGTTCCAGCAGAGCAGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: FTVSVEEMEIQTLAV*VLTLVPQFQQSSPV
Trigger: GACTGGGCTGCTCTGCTGGAACTGTGGGACAAGTGTCAGCACCAATACCGCCAATGTCTGGATTTCCATCTCTTCTACCGAGACAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp ATCCACGCCTCCTCATCTTCCGAGTCTCTGCAAATCTGCTGTAGCTaGAGTAGGTCAATGAGCTTCTTCTTCCGAATGGCCAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: IHASSSSESLQICCS*SRSMSFFFRMASGS
Trigger: GGAGCCACTGGCCATTCGGAAGAAGAAGCTCATTGACCTACTCAAGCTACAGCAGATTTGCAGAGACTCGGAAGATGAGGAGGCGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TTTGCCAGTAGTGTGAGGAAGGCGGTGAGGTCTGCACCGTTGCTCTaGGTCTTCAGGCTTGCTTCTTTCTCACCTATCCAGGATTCCACT +
Preference number: 6 (lower is better)
Translates to: FASSVRKAVRSAPLL*VFRLASFSPIQDST
Trigger: AGTGGAATCCTGGATAGGTGAGAAAGAAGCAAGCCTGAAGACCAAGAGCAACGGTGCAGACCTCACCGCCTTCCTCACACTACTGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp AGCCACAAGCTGGTCCTTCAGCTCAGCGATTTCAGAAAGCCTTTCTaGCTGGAAGCTCTGAAGACTGGCATCCAGTGTGTCGTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SHKLVLQLSDFRKPF*LEALKTGIQCVVLC
Trigger: GCAAAGCACGACACACTGGATGCCAGTCTTCAGAGCTTCCAGCAAGAAAGGCTTTCTGAAATCGCTGAGCTGAAGGACCAGCTTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp GAGGTGAGCTGCGGCTCCTTCTCCTCCATCCACTGGATAGCTTCATaGACATCCCTTTTAAATCGCTGGAGGTCTGCTGCATTAGACAGA +
Preference number: 6 (lower is better)
Translates to: EVSCGSFSSIHWIAS*TSLLNRWRSAALDR
Trigger: TCTGTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGATGTCAATGAAGCTATCCAGTGGATGGAGGAGAAGGAGCCGCAGCTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCAAGGATCAGAGCCTCTTCCATGCTGTCCCCCAGGTCTTCAATCTaGGTCAGATGGCGCTTCATTGCCTGGATCTCCTTCTGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: SRIRASSMLSPRSSI*VRWRFIAWISFCFL
Trigger: AAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGGAAGAGGCTCTGATCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp ATGGGTCTTGGTGGCTTCATGGGCAAAATGGTCTTCTaGAAATCGAGCTTCCCTGATTTCCTCCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: MGLGGFMGKMVF*KSSFPDFLQLR
Trigger: CCTGAGCTGGAGGAAATCAGGGAAGCTCGATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CAGCTCTCGACCTGGTCACACTTTCCTCGGAATAACTaGAGTTCTAAGCACTGGTCTAGCATCTTCTTGCGG +
Preference number: 6 (lower is better)
Translates to: QLSTWSHFPRNN*SSKHWSSIFLR
Trigger: CCGCAAGAAGATGCTAGACCAGTGCTTAGAACTGCAGTTATTCCGAGGAAAGTGTGACCAGGTCGAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AACTCAAAGTCCCGGATGCTTGTGTTGAACCTTTGCTaGCGACTGGCCTCGTTGAGCTTCTGTCCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: NSKSRMLVLNLC*RLASLSFCPLS
Trigger: TGACAAAGGACAGAAGCTCAACGAGGCCAGTCGGCAGCAAAGGTTCAACACAAGCATCCGGGACTTTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GGCATACGTCTCTTTCAGCTTCTCGTGGTGTGCAGCTaGCAAGCTCTGGACATTTTCAAAGCGCTCATTGAC +
Preference number: 6 (lower is better)
Translates to: GIRLFQLLVVCS*QALDIFKALID
Trigger: GTCAATGAGCGCTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGAGACGTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AGCCATGCTTCCTCTTCTTCTGCATTCTCCATGAACTaGAGATACTCGAGGGACTCCTCCAAGTTCACCCCT +
Preference number: 6 (lower is better)
Translates to: SHASSSSAFSMN*RYSRDSSKFTP
Trigger: AGGGGTGAACTTGGAGGAGTCCCTCGAGTATCTGCAGTTCATGGAGAATGCAGAAGAAGAGGAAGCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GCAGGTTGGCTCCGACCCCGTGGATCCATATATTGCTaGATATGTATGGTACAGAATGACACTTGTTCCGGG +
Preference number: 6 (lower is better)
Translates to: AGWLRPRGSIYC*ICMVQNDTCSG
Trigger: CCCGGAACAAGTGTCATTCTGTACCATACATATGCAGCAATATATGGATCCACGGGGTCGGAGCCAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp GATCCCACAGCAGGCGAAGTTGCTTCAGATGGGTCTTaGTGGCTTCATGGGCAAAATGGTCTTCTGCAAATC +
Preference number: 6 (lower is better)
Translates to: DPTAGEVASDGS*WLHGQNGLLQI
Trigger: GATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AAGAGCAGATCCCACAGCAGGCGAAGTTGCTTCAGATaGGTCTTGGTGGCTTCATGGGCAAAATGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: KSRSHSRRSCFR*VLVASWAKWSS
Trigger: AGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp TCAGAGGTGAGCTGCGGCTCCTTCTCCTCCATCCACTaGATAGCTTCATTGACATCCCTTTTAAATCGCTGG +
Preference number: 6 (lower is better)
Translates to: SEVSCGSFSSIH*IASLTSLLNRW
Trigger: CCAGCGATTTAAAAGGGATGTCAATGAAGCTATCCAGTGGATGGAGGAGAAGGAGCCGCAGCTCACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCGGTAGAAGAGATGGAAATCCAGACATTGGCGGTATaGGTGCTGACACTTGTCCCACAGTTCCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SVEEMEIQTLAV*VLTLVPQFQQS
Trigger: GCTCTGCTGGAACTGTGGGACAAGTGTCAGCACCAATACCGCCAATGTCTGGATTTCCATCTCTTCTACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AATGCATTCAGATCCACCAGGAAGGCTTCATGCTTCTaGAGAAGGGCCCCAGCTGCTTCTTCATCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: NAFRSTRKASCF*RRAPAASSSAP
Trigger: TGGAGCTGATGAAGAAGCAGCTGGGGCCCTTCTCAAGAAGCATGAAGCCTTCCTGGTGGATCTGAATGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCTCCTAGCTTTCCCAGTTCAGTAAGCAGCTGTTCTTaGAGAGCCTTCCACCTGTCTAGCACACGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SPSFPSSVSSCS*RAFHLSSTRWR
Trigger: CCTCCAACGTGTGCTAGACAGGTGGAAGGCTCTCAAAGAACAGCTGCTTACTGAACTGGGAAAGCTAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CTGGTCCTTCAGCTCAGCGATTTCAGAAAGCCTTTCTaGCTGGAAGCTCTGAAGACTGGCATCCAGTGTGTC +
Preference number: 6 (lower is better)
Translates to: LVLQLSDFRKPF*LEALKTGIQCV
Trigger: GACACACTGGATGCCAGTCTTCAGAGCTTCCAGCAAGAAAGGCTTTCTGAAATCGCTGAGCTGAAGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp ATATTGATAGAACTTCAGTGCCCGCAGCAGCACGTCACTTTTCTCTaGGGTCAACTCCAAGAGCAGATCCCACAGCAGGCGAAGTTGCTT +
Preference number: 6 (lower is better)
Translates to: ILIELQCPQQHVTFL*GQLQEQIPQQAKLL
Trigger: AAGCAACTTCGCCTGCTGTGGGATCTGCTCTTGGAGTTGACCCAAGAGAAAAGTGACGTGCTGCTGCGGGCACTGAAGTTCTATCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCATCTCCATCACACACTCTGCGCTCAATCAGGGAATTCCCAAGGTaGATAACCCCATCCACCTGCTCAGCACGACCGTTGACTTCATTT +
Preference number: 6 (lower is better)
Translates to: SSPSHTLRSIREFPR*ITPSTCSARPLTSF
Trigger: AAATGAAGTCAACGGTCGTGCTGAGCAGGTGGATGGGGTTATCAACCTTGGGAATTCCCTGATTGAGCGCAGAGTGTGTGATGGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TTGATCTGCCTAGCCTCTTCTTTCTGTAGTTCCTGTTCCCTTTCCTaGATGATGTCTGGCAGGTGGTTCCAGATTCTGCCCAGCACATCC +
Preference number: 6 (lower is better)
Translates to: LICLASSFCSSCSLS*MMSGRWFQILPSTS
Trigger: GGATGTGCTGGGCAGAATCTGGAACCACCTGCCAGACATCATCAAGGAAAGGGAACAGGAACTACAGAAAGAAGAGGCTAGGCAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TCCCGTTTCTTCATCAAAGCCTGCAGACTGTTTAAGTaGTCCCTGTCGTCTGACCTCAGGGAATTCTCACGG +
Preference number: 6 (lower is better)
Translates to: SRFFIKACRLFK*SLSSDLREFSR
Trigger: CCGTGAGAATTCCCTGAGGTCAGACGACAGGGATCACTTAAACAGTCTGCAGGCTTTGATGAAGAAACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TGGTCAATGTTGAAAGTCCCACTGGAGATCAGCTCCTaGGCCAGGTCATTCAGATCTTTGAGAGGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: WSMLKVPLEISS*ARSFRSLRGSS
Trigger: AGAGGACCCTCTCAAAGATCTGAATGACCTGGCTCAGGAGCTGATCTCCAGTGGGACTTTCAACATTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TCAGCGATTTCAGAAAGCCTTTCTTGCTGGAAGCTCTaGAGACTGGCATCCAGTGTGTCGTGCTTTGCCAGT +
Preference number: 6 (lower is better)
Translates to: SAISESLSCWKL*RLASSVSCFAS
Trigger: ACTGGCAAAGCACGACACACTGGATGCCAGTCTTCAGAGCTTCCAGCAAGAAAGGCTTTCTGAAATCGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp AAATTGTGTTGCATTCGCATCCCTAGTTGGTGCAGCTaGTCCCATTGCTGGGCCAGTCCAATGGTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: KLCCIRIPSWCS*SHCWASPMVLY
Trigger: ATACAGCACCATTGGACTGGCCCAGCAATGGGATCAGCTGCACCAACTAGGGATGCGAATGCAACACAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CCAGCAGGTTGGCTCCGACCCCGTGGATCCATATATTaGTGCATATGTATGGTACAGAATGACACTTGTTCC +
Preference number: 6 (lower is better)
Translates to: PAGWLRPRGSIY*CICMVQNDTCS
Trigger: GGAACAAGTGTCATTCTGTACCATACATATGCAGCAATATATGGATCCACGGGGTCGGAGCCAACCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp CTCTGGTACTGGTTTAACACCTCCGCTCTTCGGTGTTaGATTTCTTCTGCTGTTTCTAGGACCTTTGGTCCG +
Preference number: 6 (lower is better)
Translates to: LWYWFNTSALRC*ISSAVSRTFGP
Trigger: CGGACCAAAGGTCCTAGAAACAGCAGAAGAAATCCAACACCGAAGAGCGGAGGTGTTAAACCAGTACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp ATCCAGGCTTCCTCATCATCCAGGTCTTGGAAGAACTaGAACAAGGCATACGTCTCTTTCAGCTTCTCGTGG +
Preference number: 6 (lower is better)
Translates to: IQASSSSRSWKN*NKAYVSFSFSW
Trigger: CCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAGTTCTTCCAAGACCTGGATGATGAGGAAGCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TTCGGTGTTGGATTTCTTCTGCTGTTTCTAGGACCTTaGGTCCGCTGCTCTCGACAGCAGTTTCCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: FGVGFLLLFLGP*VRCSRQQFPLE
Trigger: CTCCAAAGGAAACTGCTGTCGAGAGCAGCGGACCAAAGGTCCTAGAAACAGCAGAAGAAATCCAACACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AGATCCCACAGCAGGCGAAGTTGCTTCAGATGGGTCTaGGTGGCTTCATGGGCAAAATGGTCTTCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: RSHSRRSCFRWV*VASWAKWSSAN
Trigger: ATTTGCAGAAGACCATTTTGCCCATGAAGCCACCAAGACCCATCTGAAGCAACTTCGCCTGCTGTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCCACCTCCTCTAGCCAGCGCTTCAGGTCTTCTGCATaGTTCTCAAACTGTAGCAGCTGGTTAGCTTCATAC +
Preference number: 6 (lower is better)
Translates to: STSSSQRFRSSA*FSNCSSWLASY
Trigger: GTATGAAGCTAACCAGCTGCTACAGTTTGAGAACAATGCAGAAGACCTGAAGCGCTGGCTAGAGGAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GCCAGCTCAGGTGATGATATCACACCGCCAATGGTTTaGATCCAGTTCTCTAGATCACTGGCCTTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: ASSGDDITPPMV*IQFSRSLALLR
Trigger: CCTTAGCAAGGCCAGTGATCTAGAGAACTGGATCAAAACCATTGGCGGTGTGATATCATCACCTGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CTCCCTGGATCCACAGCATTCAGGAATTTCTCAAACTaGGGCTCAGGTTCACCTTCCTCTACCATAGGCAGA +
Preference number: 6 (lower is better)
Translates to: LPGSTAFRNFSN*GSGSPSSTIGR
Trigger: TCTGCCTATGGTAGAGGAAGGTGAACCTGAGCCCAAGTTTGAGAAATTCCTGAATGCTGTGGATCCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCTGGGGTTAGGAGCTCTTCAAAGAGCAGTTCGTCAGCCACTTTGTaGATGTCCTTTAGCCGAGGCTCATTACTCTTTAGATCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SGVRSSSKSSSSATL*MSFSRGSLLFRSLW
Trigger: CCAGAGGGATCTAAAGAGTAATGAGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGAACTGCTCTTTGAAGAGCTCCTAACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CCTTCTGGGGTTAGGAGCTCTTCAAAGAGCAGTTCGTCAGCCACTTaGTTGATGTCCTTTAGCCGAGGCTCATTACTCTTTAGATCCCTC +
Preference number: 6 (lower is better)
Translates to: PSGVRSSSKSSSSAT*LMSFSRGSLLFRSL
Trigger: GAGGGATCTAAAGAGTAATGAGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGAACTGCTCTTTGAAGAGCTCCTAACCCCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp AAGTCCTCAGCCAGCTCAGGTGATGATATCACACCGCCAATGGTTTaGATCCAGTTCTCTAGATCACTGGCCTTGCTAAGGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: KSSASSGDDITPPMV*IQFSRSLALLRKRK
Trigger: CTTCCTCTTCCTTAGCAAGGCCAGTGATCTAGAGAACTGGATCAAAACCATTGGCGGTGTGATATCATCACCTGAGCTGGCTGAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CCATGCTGTCCCCCAGGTCTTCAATCTTGGTCAGATGGCGCTTCATaGCCTGGATCTCCTTCTGTTTCCTTTTATTTGCTTCAAGTTGGG +
Preference number: 6 (lower is better)
Translates to: PCCPPGLQSWSDGAS*PGSPSVSFYLLQVG
Trigger: CCCAACTTGAAGCAAATAAAAGGAAACAGAAGGAGATCCAGGCAATGAAGCGCCATCTGACCAAGATTGAAGACCTGGGGGACAGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TTCTCAAACTGTAGCAGCTGGTTAGCTTCATACAGCTaGGTCCCTTTTTGTGCTGTTGCCTCCAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: FSNCSSWLASYS*VPFCAVASSNS
Trigger: GGAGTTGCTGGAGGCAACAGCACAAAAAGGGACTCAGCTGTATGAAGCTAACCAGCTGCTACAGTTTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TCATTCAGACTCTCCTTCCGATCACTTGTAAGACCTTaGAGTGTGTCCCAGGCCTCATTCAGCTCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SFRLSFRSLVRP*SVSQASFSSVL
Trigger: GAGAACAGAGCTGAATGAGGCCTGGGACACACTTCAAGGTCTTACAAGTGATCGGAAGGAGAGTCTGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TTAAGTAGGTTTCCTGCTGAAGTTAAGTCCCTGGCCTaGTCCTTCATGGCCAACAAGCCTTCTGCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: LSRFPAEVKSLA*SFMANKPSASE
Trigger: TTCAGAGGCAGAAGGCTTGTTGGCCATGAAGGATCAGGCCAGGGACTTAACTTCAGCAGGAAACCTACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TCATTCTCCAAAGCTTCATGCTTCTTTAGCAAACTCTaGGTAGCAGCCAGTGTGTCTCCTGAATCCCCGCGA +
Preference number: 6 (lower is better)
Translates to: SFSKASCFFSKL*VAASVSPESPR
Trigger: TCGCGGGGATTCAGGAGACACACTGGCTGCTACTCAGAGTTTGCTAAAGAAGCATGAAGCTTTGGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp ATCCACGCCTCCTCATCTTCCGAGTCTCTGCAAATCTaGTGTAGCTTGAGTAGGTCAATGAGCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: IHASSSSESLQI*CSLSRSMSFFF
Trigger: GAAGAAGAAGCTCATTGACCTACTCAAGCTACAGCAGATTTGCAGAGACTCGGAAGATGAGGAGGCGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp ATCATCTGCTTCCCTGTGAAACATCTCAACAGCATGTaGACTGCTGAGCAGCTGATACTGTTCATCTGCCAG +
Preference number: 6 (lower is better)
Translates to: IICFPVKHLNSM*TAEQLILFICQ
Trigger: CTGGCAGATGAACAGTATCAGCTGCTCAGCAGTGCACATGCTGTTGAGATGTTTCACAGGGAAGCAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AACTGGAACAAGGCATACGTCTCTTTCAGCTTCTCGTaGTGTGCAGCTGCCAAGCTCTGGACATTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: NWNKAYVSFSFS*CAAAKLWTFSK
Trigger: CTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGAGACGTATGCCTTGTTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AACATAGTCGTAGCCAGCAGGTTGGCTCCGACCCCGTaGATCCATATATTGCTGCATATGTATGGTACAGAA +
Preference number: 6 (lower is better)
Translates to: NIVVASRLAPTP*IHILLHMYGTE
Trigger: TTCTGTACCATACATATGCAGCAATATATGGATCCACGGGGTCGGAGCCAACCTGCTGGCTACGACTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CTTAGGATGTTTCTCCTGGGCACACTCATTAGCATATaGGTTCACTCTGTCCACTTTTCCCTTCCGAGCGGT +
Preference number: 6 (lower is better)
Translates to: LRMFLLGTLISI*VHSVHFSLPSG
Trigger: ACCGCTCGGAAGGGAAAAGTGGACAGAGTGAACCAATATGCTAATGAGTGTGCCCAGGAGAAACATCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GCATCTGCAGAATGGGAAATCATCAGCTTGTCTGCTTaGGCACACAACTCCTTCACCTTGTCATCCATGACC +
Preference number: 6 (lower is better)
Translates to: ASAEWEIISLSA*AHNSFTLSSMT
Trigger: GGTCATGGATGACAAGGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGATGATTTCCCATTCTGCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CACTTGTCCCACAGTTCCAGCAGAGCAGCCCAGTCATaGGCAAGTATTGTCATCTTCTCTCGAATTTCCTCA +
Preference number: 6 (lower is better)
Translates to: HLSHSSSRAAQS*ASIVIFSRISS
Trigger: TGAGGAAATTCGAGAGAAGATGACAATACTTGCCAATGACTGGGCTGCTCTGCTGGAACTGTGGGACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TTCACTGTCTCGGTAGAAGAGATGGAAATCCAGACATaGGCGGTATTGGTGCTGACACTTGTCCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: FTVSVEEMEIQT*AVLVLTLVPQF
Trigger: GAACTGTGGGACAAGTGTCAGCACCAATACCGCCAATGTCTGGATTTCCATCTCTTCTACCGAGACAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCCTCATCTTCCGAGTCTCTGCAAATCTGCTGTAGCTaGAGTAGGTCAATGAGCTTCTTCTTCCGAATGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSESLQICCS*SRSMSFFFRMA
Trigger: GGCCATTCGGAAGAAGAAGCTCATTGACCTACTCAAGCTACAGCAGATTTGCAGAGACTCGGAAGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AGGTCCGAAATCTTCCCTTCCTGGGCAGTGATTGCTTaGTCCAAATCATCCCGTTTCTTCATCAAAGCCTGC +
Preference number: 6 (lower is better)
Translates to: RSEIFPSWAVIA*SKSSRFFIKAC
Trigger: GCAGGCTTTGATGAAGAAACGGGATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTCGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TCCGCGTTCTCACACCAGTTGTTGAAGGCTGAAGCTTaGTGTGCAAATTCCATGAATAGCTCCTCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SAFSHQLLKAEA*CANSMNSSSAF
Trigger: GAAGGCTGAGGAGCTATTCATGGAATTTGCACACAAAGCTTCAGCCTTCAACAACTGGTGTGAGAACGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GGTTCTGACAAGTCCTCTTCCGCGTTCTCACACCAGTaGTTGAAGGCTGAAGCTTTGTGTGCAAATTCCATG +
Preference number: 6 (lower is better)
Translates to: GSDKSSSAFSHQ*LKAEALCANSM
Trigger: CATGGAATTTGCACACAAAGCTTCAGCCTTCAACAACTGGTGTGAGAACGCGGAAGAGGACTTGTCAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CTCCTTGGTAATATAGGCCTTGCCTTCTGCCAGAGCTaGGAATGCACTCTCTATGTCATCGCTGGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: LLGNIGLAFCQS*ECTLYVIAGLD
Trigger: ATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAGGCAAGGCCTATATTACCAAGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp ACTTGTCCCACAGTTCCAGCAGAGCAGCCCAGTCATTGGCAAGTATaGTCATCTTCTCTCGAATTTCCTCAGAAGCTTCGTGATTGCCAT +
Preference number: 6 (lower is better)
Translates to: TCPTVPAEQPSHWQV*SSSLEFPQKLRDCH
Trigger: ATGGCAATCACGAAGCTTCTGAGGAAATTCGAGAGAAGATGACAATACTTGCCAATGACTGGGCTGCTCTGCTGGAACTGTGGGACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp AAGGCATGCACATCGTCCAGTTGTGACTTCCAAGCAGCTAATGCCTaGGCCAAAGAGGCTGTCTTTTCATTCAGAACTTGGATCTTGGTG +
Preference number: 6 (lower is better)
Translates to: KACTSSSCDFQAANA*AKEAVFSFRTWILV
Trigger: CACCAAGATCCAAGTTCTGAATGAAAAGACAGCCTCTTTGGCCAAGGCATTAGCTGCTTGGAAGTCACAACTGGACGATGTGCATGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TGCACAGGTTCTGACAAGTCCTCTTCCGCGTTCTCACACCAGTTGTaGAAGGCTGAAGCTTTGTGTGCAAATTCCATGAATAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: CTGSDKSSSAFSHQL*KAEALCANSMNSSS
Trigger: TGAGGAGCTATTCATGGAATTTGCACACAAAGCTTCAGCCTTCAACAACTGGTGTGAGAACGCGGAAGAGGACTTGTCAGAACCTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CAATGCACAGGTTCTGACAAGTCCTCTTCCGCGTTCTCACACCAGTaGTTGAAGGCTGAAGCTTTGTGTGCAAATTCCATGAATAGCTCC +
Preference number: 6 (lower is better)
Translates to: QCTGSDKSSSAFSHQ*LKAEALCANSMNSS
Trigger: GGAGCTATTCATGGAATTTGCACACAAAGCTTCAGCCTTCAACAACTGGTGTGAGAACGCGGAAGAGGACTTGTCAGAACCTGTGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CCAAACATCATCCAGTTCCACTCCAGTGTTTTCTGTCTTTTTCTCTaGGATCCACTCCAACATGTCTCCTGCCTCATAGGCCAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: PNIIQFHSSVFCLFL*DPLQHVSCLIGQQK
Trigger: TTTCTGCTGGCCTATGAGGCAGGAGACATGTTGGAGTGGATCCAAGAGAAAAAGACAGAAAACACTGGAGTGGAACTGGATGATGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp ACGTTCTCTAGGTCCGAAATCTTCCCTTCCTGGGCAGTGATTGCTTaGTCCAAATCATCCCGTTTCTTCATCAAAGCCTGCAGACTGTTT +
Preference number: 6 (lower is better)
Translates to: TFSRSEIFPSWAVIA*SKSSRFFIKACRLF
Trigger: AAACAGTCTGCAGGCTTTGATGAAGAAACGGGATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTCGGACCTAGAGAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp CGTTCTCTAGGTCCGAAATCTTCCCTTCCTGGGCAGTaGTTGCTTTGTCCAAATCATCCCGTTTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: RSLGPKSSLPGQ*LLCPNHPVSSS
Trigger: TGATGAAGAAACGGGATGATTTGGACAAAGCAATCACTGCCCAGGAAGGGAAGATTTCGGACCTAGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp CAGCAATCTCTTCCTTGGCATAGTGGTCATTGTCTATaGGCCTTGTGGCAACGTTCTCTAGGTCCGAAATCT +
Preference number: 6 (lower is better)
Translates to: QQSLPWHSGHCL*ALWQRSLGPKS
Trigger: AGATTTCGGACCTAGAGAACGTTGCCACAAGGCTCATAGACAATGACCACTATGCCAAGGAAGAGATTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp GGGTCCTCTCGTGCCAACATCTCTGCTTCCAATAGCTaGTGCTTCTTAAGTAGGTTTCCTGCTGAAGTTAAG +
Preference number: 6 (lower is better)
Translates to: GSSRANISASNS*CFLSRFPAEVK
Trigger: CTTAACTTCAGCAGGAAACCTACTTAAGAAGCATCAGCTATTGGAAGCAGAGATGTTGGCACGAGAGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp AAGTTGGGATTCCAGAGTTCCTGTTTCCTTGAGCAATaGTCCATCCAGAAAATAGGCCCTGGTCTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: KLGFQSSCFLEQ*SIQKIGPGLLD
Trigger: ATCCAGGAGACCAGGGCCTATTTTCTGGATGGATCATTGCTCAAGGAAACAGGAACTCTGGAATCCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AGGTGCATCTGCAGAATGGGAAATCATCAGCTTGTCTaGTTTGGCACACAACTCCTTCACCTTGTCATCCAT +
Preference number: 6 (lower is better)
Translates to: RCICRMGNHQLV*FGTQLLHLVIH
Trigger: ATGGATGACAAGGTGAAGGAGTTGTGTGCCAAAGCAGACAAGCTGATGATTTCCCATTCTGCAGATGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TCATCTTCTCTCGAATTTCCTCAGAAGCTTCGTGATTaGCATCCAGGAGTTCTTGACCAGTTGCATCAGCAG +
Preference number: 6 (lower is better)
Translates to: SSSLEFPQKLRD*HPGVLDQLHQQ
Trigger: CTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAAATTCGAGAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TTTTCAAATGCATTCAGATCCACCAGGAAGGCTTCATaGTTCTTGAGAAGGGCCCCAGCTGCTTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: FSNAFRSTRKAS*FLRRAPAASSS
Trigger: TGATGAAGAAGCAGCTGGGGCCCTTCTCAAGAAGCATGAAGCCTTCCTGGTGGATCTGAATGCATTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GCTGGCAGACTTCTGCCTGATCTCTTAGAGCCTTTATaGTGTTTTCAAATGCATTCAGATCCACCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: AGRLLPDLLEPL*CFQMHSDPPGR
Trigger: CCTTCCTGGTGGATCTGAATGCATTTGAAAACAGCATAAAGGCTCTAAGAGATCAGGCAGAAGTCTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp GGTAATATAGGCCTTGCCTTCTGCCAGAGCTTGGAATaGACTCTCTATGTCATCGCTGGTCTTGATATTCTC +
Preference number: 6 (lower is better)
Translates to: GNIGLAFCQSLE*TLYVIAGLDIL
Trigger: GAGAATATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAGGCAAGGCCTATATTACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TTTCATGTCCTCCTTGGTAATATAGGCCTTGCCTTCTaGCAGAGCTTGGAATGCACTCTCTATGTCATCGCT +
Preference number: 6 (lower is better)
Translates to: FHVLLGNIGLAF*QSLECTLYVIA
Trigger: AGCGATGACATAGAGAGTGCATTCCAAGCTCTGGCAGAAGGCAAGGCCTATATTACCAAGGAGGACATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp TCTTTCAGCTTCTCGTGGTGTGCAGCTGCCAAGCTCTaGACATTTTCAAAGCGCTCATTGACACCATTCATT +
Preference number: 6 (lower is better)
Translates to: SFSFSWCAAAKL*TFSKRSLTPFI
Trigger: AATGAATGGTGTCAATGAGCGCTTTGAAAATGTCCAGAGCTTGGCAGCTGCACACCACGAGAAGCTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp ATCCAGTTCCACTCCAGTGTTTTCTGTCTTTTTCTCTaGGATCCACTCCAACATGTCTCCTGCCTCATAGGC +
Preference number: 6 (lower is better)
Translates to: IQFHSSVFCLFL*DPLQHVSCLIG
Trigger: GCCTATGAGGCAGGAGACATGTTGGAGTGGATCCAAGAGAAAAAGACAGAAAACACTGGAGTGGAACTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TTCATTCAGACTCTCCTTCCGATCACTTGTAAGACCTaGAAGTGTGTCCCAGGCCTCATTCAGCTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: FIQTLLPITCKT*KCVPGLIQLCS
Trigger: AGAACAGAGCTGAATGAGGCCTGGGACACACTTCAAGGTCTTACAAGTGATCGGAAGGAGAGTCTGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp ACATCGTCCAGTTGTGACTTCCAAGCAGCTAATGCCTaGGCCAAAGAGGCTGTCTTTTCATTCAGAACTTGG +
Preference number: 6 (lower is better)
Translates to: TSSSCDFQAANA*AKEAVFSFRTW
Trigger: CCAAGTTCTGAATGAAAAGACAGCCTCTTTGGCCAAGGCATTAGCTGCTTGGAAGTCACAACTGGACGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp GGAGCTCTTCAAAGAGCAGTTCGTCAGCCACTTTGTTaGTGTCCTTTAGCCGAGGCTCATTACTCTTTAGAT +
Preference number: 6 (lower is better)
Translates to: GALQRAVRQPLC*CPLAEAHYSLD
Trigger: ATCTAAAGAGTAATGAGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGAACTGCTCTTTGAAGAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TTGCTTCAAGTTGGGATTCCAGAGTTCCTGTTTCCTTaGGCAATGATCCATCCAGAAAATAGGCCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: LLQVGIPEFLFP*AMIHPENRPWS
Trigger: AGACCAGGGCCTATTTTCTGGATGGATCATTGCTCAAGGAAACAGGAACTCTGGAATCCCAACTTGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TTCATTGACATCCCTTTTAAATCGCTGGAGGTCTGCTaGATTAGACAGACTTTCTCGTCTCTTGAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: FIDIPFKSLEVC*IRQTFSSLESQ
Trigger: CTGGCTCTCAAGAGACGAGAAAGTCTGTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGATGTCAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp AGCTTCATTGACATCCCTTTTAAATCGCTGGAGGTCTaGTGCATTAGACAGACTTTCTCGTCTCTTGAGAGC +
Preference number: 6 (lower is better)
Translates to: SFIDIPFKSLEV*CIRQTFSSLES
Trigger: GCTCTCAAGAGACGAGAAAGTCTGTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGATGTCAATGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp CACTGGATAGCTTCATTGACATCCCTTTTAAATCGCTaGAGGTCTGCTGCATTAGACAGACTTTCTCGTCTC +
Preference number: 6 (lower is better)
Translates to: HWIASLTSLLNR*RSAALDRLSRL
Trigger: GAGACGAGAAAGTCTGTCTAATGCAGCAGACCTCCAGCGATTTAAAAGGGATGTCAATGAAGCTATCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp TCCTTTAGCCGAGGCTCATTACTCTTTAGATCCCTCTaGAACTCGTCAAACTTCTTCTGCAGTTCCCAAACA +
Preference number: 6 (lower is better)
Translates to: SFSRGSLLFRSL*NSSNFFCSSQT
Trigger: TGTTTGGGAACTGCAGAAGAAGTTTGACGAGTTCCAGAGGGATCTAAAGAGTAATGAGCCTCGGCTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TTCCTCAGAAGCTTCGTGATTGCCATCCAGGAGTTCTaGACCAGTTGCATCAGCAGATTGAAATCGATCATC +
Preference number: 6 (lower is better)
Translates to: FLRSFVIAIQEF*TSCISRLKSII
Trigger: GATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GTTAGGAGCTCTTCAAAGAGCAGTTCGTCAGCCACTTaGTTGATGTCCTTTAGCCGAGGCTCATTACTCTTT +
Preference number: 6 (lower is better)
Translates to: VRSSSKSSSSAT*LMSFSRGSLLF
Trigger: AAAGAGTAATGAGCCTCGGCTAAAGGACATCAACAAAGTGGCTGACGAACTGCTCTTTGAAGAGCTCCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp CTCTCGAATTTCCTCAGAAGCTTCGTGATTGCCATCCAGGAGTTCTaGACCAGTTGCATCAGCAGATTGAAATCGATCATCATAAGAGTC +
Preference number: 6 (lower is better)
Translates to: LSNFLRSFVIAIQEF*TSCISRLKSIIIRV
Trigger: GACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAAATTCGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TCATTCTCCCGTCTAATAGCTCGAGCATGGAGAGACTCCATATTTTaGTTCAAGCTTTCAACCCTAGATGCTATGTCTTCTGCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: SFSRLIARAWRDSIF*FKLSTLDAMSSAAK
Trigger: CTTCGCTGCAGAAGACATAGCATCTAGGGTTGAAAGCTTGAACAAAAATATGGAGTCTCTCCATGCTCGAGCTATTAGACGGGAGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp GAGCTTGGAATGCACTCTCTATGTCATCGCTGGTCTTaGTATTCTCTGACTCCTTGTCAATCAGGAATGATG +
Preference number: 6 (lower is better)
Translates to: ELGMHSLCHRWS*YSLTPCQSGMM
Trigger: CATCATTCCTGATTGACAAGGAGTCAGAGAATATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TGGATCCATATATTGCTGCATATGTATGGTACAGAATaGCACTTGTTCCGGGGTGAGAGCCTGTTTCATGTC +
Preference number: 6 (lower is better)
Translates to: WIHILLHMYGTE*HLFRGESLFHV
Trigger: GACATGAAACAGGCTCTCACCCCGGAACAAGTGTCATTCTGTACCATACATATGCAGCAATATATGGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TTTGTTCAAGCTTTCAACCCTAGATGCTATGTCTTCTaGAGCGAAGTGTCCTTCCTCCACCATTTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: FVQAFNPRCYVF*SEVSFLHHFVS
Trigger: GGAAACAAAATGGTGGAGGAAGGACACTTCGCTGCAGAAGACATAGCATCTAGGGTTGAAAGCTTGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CCGGCATTTCTTATCAATCTGTTCCTTGACATCATCTaGTTCCCTGTGAAACATCTCAACAGCATGTGCACT +
Preference number: 6 (lower is better)
Translates to: PAFLINLFLDII*FPVKHLNSMCT
Trigger: AGTGCACATGCTGTTGAGATGTTTCACAGGGAAGCAGATGATGTCAAGGAACAGATTGATAAGAAATGCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AGATCACTGGCCTTGCTAAGGAAGAGGAAGAATTTATaGGCTTCATTCAGACTCTCCTTCCGATCACTTGTA +
Preference number: 6 (lower is better)
Translates to: RSLALLRKRKNL*ASFRLSFRSLV
Trigger: TACAAGTGATCGGAAGGAGAGTCTGAATGAAGCCCATAAATTCTTCCTCTTCCTTAGCAAGGCCAGTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TTCGTGATTGCCATCCAGGAGTTCTTGACCAGTTGCATCAGCAGATaGAAATCGATCATCATAAGAGTCAATCTCATGCTTATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FVIAIQEFLTSCISR*KSIIIRVNLMLMLL
Trigger: CAGCAGCATAAGCATGAGATTGACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS TCA 72 bp TTGGCTTGCACCTCTGATACAAAGGATTCGTGCTTCTaGTATTTCCCCTGTATGTTTGTGGGTTCATATGTC +
Preference number: 6 (lower is better)
Translates to: LACTSDTKDSCF*YFPCMFVGSYV
Trigger: GACATATGAACCCACAAACATACAGGGGAAATATCAGAAGCACGAATCCTTTGTATCAGAGGTGCAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp TTTGCCTTTATCTCTGGTAACTTAGGATGTTTCTCCTaGGCACACTCATTAGCATATTGGTTCACTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FAFISGNLGCFS*AHSLAYWFTLS
Trigger: GGACAGAGTGAACCAATATGCTAATGAGTGTGCCCAGGAGAAACATCCTAAGTTACCAGAGATAAAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp GCCTTAAGATCATTCTCCCGTCTAATAGCTCGAGCATaGAGAGACTCCATATTTTTGTTCAAGCTTTCAACC +
Preference number: 6 (lower is better)
Translates to: ALRSFSRLIARA*RDSIFLFKLST
Trigger: GGTTGAAAGCTTGAACAAAAATATGGAGTCTCTCCATGCTCGAGCTATTAGACGGGAGAATGATCTTAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp CTTTCAATGTCTCCTCACTCACACCTATGGTGTCTTTaGCTTGAATCTGTTGCTCCAAATTGTGTTGCATTC +
Preference number: 6 (lower is better)
Translates to: LSMSPHSHLWCL*LESVAPNCVAF
Trigger: GAATGCAACACAATTTGGAGCAACAGATTCAAGCCAAAGACACCATAGGTGTGAGTGAGGAGACATTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp GCCATCCAGGAGTTCTTGACCAGTTGCATCAGCAGATaGAAATCGATCATCATAAGAGTCAATCTCATGCTT +
Preference number: 6 (lower is better)
Translates to: AIQEFLTSCISR*KSIIIRVNLML
Trigger: AAGCATGAGATTGACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AAGCTTCGTGATTGCCATCCAGGAGTTCTTGACCAGTaGCATCAGCAGATTGAAATCGATCATCATAAGAGT +
Preference number: 6 (lower is better)
Translates to: KLRDCHPGVLDQ*HQQIEIDHHKS
Trigger: ACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp TGCCTTGGCCAAAGAGGCTGTCTTTTCATTCAGAACTaGGATCTTGGTGGAAATCTTATCCTTGTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: CLGQRGCLFIQN*DLGGNLILVLS
Trigger: ACTCAGAACAAGGATAAGATTTCCACCAAGATCCAAGTTCTGAATGAAAAGACAGCCTCTTTGGCCAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp AGAGCTTGGAATGCACTCTCTATGTCATCGCTGGTCTaGATATTCTCTGACTCCTTGTCAATCAGGAATGAT +
Preference number: 6 (lower is better)
Translates to: RAWNALSMSSLV*IFSDSLSIRND
Trigger: ATCATTCCTGATTGACAAGGAGTCAGAGAATATCAAGACCAGCGATGACATAGAGAGTGCATTCCAAGCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 90 bp TTTCCTCAGAAGCTTCGTGATTGCCATCCAGGAGTTCTTGACCAGTaGCATCAGCAGATTGAAATCGATCATCATAAGAGTCAATCTCAT +
Preference number: 6 (lower is better)
Translates to: FPQKLRDCHPGVLDQ*HQQIEIDHHKSQSH
Trigger: ATGAGATTGACTCTTATGATGATCGATTTCAATCTGCTGATGCAACTGGTCAAGAACTCCTGGATGGCAATCACGAAGCTTCTGAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp CTCAGAGTCATAGTGGTCATTGTCAATAAGCTTGGTTaGAGTCTCATCCAAGGTTATGATCTTTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LRVIVVIVNKLG*SLIQGYDLFFL
Trigger: CAGGAAGAAAAGATCATAACCTTGGATGAGACTGCAACCAAGCTTATTGACAATGACCACTATGACTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS GCA 72 bp TGTTTTCTCCAAGTTATTGAGCATAATCTCATTCACTaGCAATTCCTCTTCAAAGTCCTGCTGCTTCTGAAC +
Preference number: 6 (lower is better)
Translates to: CFLQVIEHNLIH*QFLFKVLLLLN
Trigger: GTTCAGAAGCAGCAGGACTTTGAAGAGGAATTGGCAGTGAATGAGATTATGCTCAATAACTTGGAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AGGATTCGTGCTTCTGATATTTCCCCTGTATGTTTGTaGGTTCATATGTCTTATCTTTTGCAATTTCAAGCT +
Preference number: 6 (lower is better)
Translates to: RIRASDISPVCL*VHMSYLLQFQA
Trigger: AGCTTGAAATTGCAAAAGATAAGACATATGAACCCACAAACATACAGGGGAAATATCAGAAGCACGAATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CCA 72 bp AAGAGGCTGTCTTTTCATTCAGAACTTGGATCTTGGTaGAAATCTTATCCTTGTTCTGAGTTTCTTCCTTAT +
Preference number: 6 (lower is better)
Translates to: KRLSFHSELGSW*KSYPCSEFLPY
Trigger: ATAAGGAAGAAACTCAGAACAAGGATAAGATTTCCACCAAGATCCAAGTTCTGAATGAAAAGACAGCCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8
CDS CAA 72 bp CAAAGGATTCGTGCTTCTGATATTTCCCCTGTATGTTaGTGGGTTCATATGTCTTATCTTTTGCAATTTCAA +
Preference number: 6 (lower is better)
Translates to: QRIRASDISPVC*WVHMSYLLQFQ
Trigger: TTGAAATTGCAAAAGATAAGACATATGAACCCACAAACATACAGGGGAAATATCAGAAGCACGAATCCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027817.8