RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPSB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024160

Ensembl transcript IDs: ENSMUST00000024976.5, ENSMUST00000068508.13, ENSMUST00000117890.8, ENSMUST00000119829.8, ENSMUST00000120943.8, ENSMUST00000168265.8

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCGTTCCCAGGGGAGAAGTCAGCTTCTTCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTG +
Preference number: 1 (lower is better)
Translates to: LRSQGRSQLLRQRFL*QGLVSRLSAPGVAV
Trigger: CACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAAGAAGCTGACTTCTCCCCTGGGAACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR GCA 90 bp TTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTaGGTTCCCAGGGGAGAAGTCAGCTTCTTCGGCAGCGCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: FPLLLPWKGEKEEGI*VPRGEVSFFGSASS
Trigger: AGAGGAAGCGCTGCCGAAGAAGCTGACTTCTCCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR GCA 90 bp AGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTaGCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: REIGKSLDLSSSLSC*PGRARKRKVSAFPG
Trigger: CCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR GCA 90 bp CTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTaGTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCA +
Preference number: 1 (lower is better)
Translates to: LREIGKSLDLSSSLS*CPGRARKRKVSAFP
Trigger: TGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR TCA 90 bp AGGACAAATAGGAGTACGGCTTCCCTACCAGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCACCGGAGAAGACTGTCCTGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: RTNRSTASLPAQAVE*PSLHGHRRRLSWPQ
Trigger: CTGAGGCCAGGACAGTCTTCTCCGGTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGCTGGTAGGGAAGCCGTACTCCTATTTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTCCACGGCCCCGTGGGTaGGGACAGCCCATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLPRPRG*GQPIFS
Trigger: GGAGAAGATGGGCTGTCCCCACCCACGGGGCCGTGG...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCACGGCCCCGTGGGTaGGGACAGCCCATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PLPSLQQELTTCSASQESPRPRG*GQPIFS
Trigger: GGAGAAGATGGGCTGTCCCCACCCACGGGGCCGTGG...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR GCA 90 bp ACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTGCCAGGAGGGGGGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: TGPGLQTLGTRCSCARRGGISSG*SSCSEP
Trigger: GGGTTCTGAGCATGAACTGCAACCACTGGAAATCCC...CCCCCTCCTGGCACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR-3UTR TCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: QPIFSPGYECTPLRRPASAQAVE*PSLHGH
Trigger: GTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGC...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR TCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPAQAVE*PSLHGH
Trigger: GTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGC...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGCGGAGAAGACTGTCCTaGCCTCAGGGAGATAGGGAA +
Preference number: 2 (lower is better)
Translates to: GHPLPSLQQELTTCSASQRRRLS*PQGDRE
Trigger: TTCCCTATCTCCCTGAGGCCAGGACAGTCTTCTCCG...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR GCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGTTCTTCCCTCTCCTaGTGCCCTGGAAGGGCGAGA +
Preference number: 2 (lower is better)
Translates to: HPLPSLQQELTTCSASQESSSLS*CPGRAR
Trigger: TCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACT...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACGGAGAAGACTGTCCTaGCCTCAGGGAGATAGGGAA +
Preference number: 2 (lower is better)
Translates to: HPLPSLQQELTTCSASQERRRLS*PQGDRE
Trigger: TTCCCTATCTCCCTGAGGCCAGGACAGTCTTCTCCG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR TCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: PLPSLQQELTTCSASQESAQAVE*PSLHGH
Trigger: GTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGC...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR TCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: HPLPSLQQELTTCSASQEAQAVE*PSLHGH
Trigger: GTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGC...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAGTTCCCAAGACACGTaGCAACTCAAAGGACAAATA +
Preference number: 2 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPSSQDT*QLKGQI
Trigger: TATTTGTCCTTTGAGTTGCCACGTGTCTTGGGAACT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR GCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCAGTTCTTCCCTCTCCTaGTGCCCTGGAAGGGCGAGA +
Preference number: 2 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLSSSLS*CPGRAR
Trigger: TCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACT...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCCGGAGAAGACTGTCCTaGCCTCAGGGAGATAGGGAA +
Preference number: 2 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLRRRLS*PQGDRE
Trigger: TTCCCTATCTCCCTGAGGCCAGGACAGTCTTCTCCG...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 2 (lower is better)
Translates to: PLPSLQQELTTCSASQESTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR-3UTR GCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCGCTGACAACATGCAGTaGAAGTCAGGAAAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLADNMQ*KSGKPH
Trigger: GTGGGGCTTTCCTGACTTGCACTGCATGTTGTCAGC...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR-3UTR CCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAGTTCCCAAGACACGTaGCAACTCAAAGGACAAATA +
Preference number: 2 (lower is better)
Translates to: APTAISAAGADNMQCKSGSSQDT*QLKGQI
Trigger: TATTTGTCCTTTGAGTTGCCACGTGTCTTGGGAACT...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR TCA 72 bp CAGGGGAGAAGTCAGCTTCTTCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGACTCTCGGCACCAGGT +
Preference number: 3 (lower is better)
Translates to: QGRSQLLRQRFL*QGLVSRLSAPG
Trigger: ACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAAGAAGCTGACTTCTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR GCA 72 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATaGAGTGCAAGTCAGGAAAGCCCCACGGCCCCGTGG +
Preference number: 3 (lower is better)
Translates to: HPLPSLQQELTT*SASQESPTAPW
Trigger: CCACGGGGCCGTGGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR GCA 72 bp CTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTaGGTTCCCAGGGGAGAAGTCAGCTTCTTCGGCAGC +
Preference number: 3 (lower is better)
Translates to: LLPWKGEKEEGI*VPRGEVSFFGS
Trigger: GCTGCCGAAGAAGCTGACTTCTCCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR CCA 72 bp GTAGCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGAACCCAGCCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: VAVPGGGTGDFQ*LQFMLRTQPSL
Trigger: CAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
3UTR CCA 72 bp CCTACCAGCACAGGCAGTAGAATGACCTTCACTCCATaGTCACCGGAGAAGACTGTCCTGGCCTCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: PTSTGSRMTFTP*SPEKTVLASGR
Trigger: TCTCCCTGAGGCCAGGACAGTCTTCTCCGGTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGCTGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR TCA 72 bp AGGAGTACGGCTTCCCTACCAGCACAGGCAGTAGAATaGCCTTCACTCCATGGTCACCGGAGAAGACTGTCC +
Preference number: 3 (lower is better)
Translates to: RSTASLPAQAVE*PSLHGHRRRLS
Trigger: GGACAGTCTTCTCCGGTGACCATGGAGTGAAGGTCATTCTACTGCCTGTGCTGGTAGGGAAGCCGTACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR GCA 72 bp ATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTaGTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCT +
Preference number: 3 (lower is better)
Translates to: IGKSLDLSSSLS*CPGRARKRKVS
Trigger: AGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
3UTR CCA 72 bp GGTTCACAGGTGCCTAGCTGCAGTTCCCAAGACACGTaGCAACTCAAAGGACAAATAGGAGTACGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: GSQVPSCSSQDT*QLKGQIGVRLP
Trigger: GGGAAGCCGTACTCCTATTTGTCCTTTGAGTTGCCACGTGTCTTGGGAACTGCAGCTAGGCACCTGTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGCCGGCGCGGCTCACCTaGGGCCAAAAAGCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRPARLT*GQKAPP
Trigger: CGGGGGAGCTTTTTGGCCGCAGGTGAGCCGCGCCGG...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTGCCAGGCCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PLTGPGLQTLGTRCSCARPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...CCTGGCACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTCCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCCCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTGCCAGGGGTACTGCAGGGATGTaGAGCTGGCGCAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PLTGPGLQTLGTRCSCARGTAGM*SWRRSG
Trigger: TCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACC...CCTGGCACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTGCCAGCCCCACCCATaGCCCAGGCAACACCTACCA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASCQPHP*PRQHLP
Trigger: TGGTAGGTGTTGCCTGGGTCATGGGTGGGGCTGGCA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTCCCCTAGCTCCTTGGTaGCCCGAATGGCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLPLAPW*PEWLQC
Trigger: GCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGG...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGCATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCTTGCTTGAGGCCAGGTaGCAAGGGCAGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPLLEAR*QGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGAGAGTGCCATGTGGGTTaGGAGCCAGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGECHVG*EPGSSS
Trigger: GGAGGAGCTTCCTGGCTCCCAACCCACATGGCACTC...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRYAALA*GQVARA
Trigger: TGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATA...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGATGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGCISAG*AQDEMP
Trigger: TGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGCCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCCATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCAGGGGTTGCTTGAGGCCAGGTaGCAAGGGCAGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: SPAALEGRERGRYLRSQGLLEAR*QGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA...CCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACAACCCAGACACCCATaGCTTTGGATGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGQPRHP*LWMCPS
Trigger: GCTGGGACACATCCAAAGTCATGGGTGTCTGGGTTG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024976.5
CDS-3UTR TCA 90 bp GTCAGCTTCTTCGGCAGCGCTTCCTCTGACAGGGCCTGGTCTCCAGACTCTCGGTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSFFGSASSDRAWSPDSRWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...CCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAAGAAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLYAALA*GQVARA
Trigger: TGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATA...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSRQRFL*QGLVSR
Trigger: TCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCG...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPRQRFL*QGLVSR
Trigger: TCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCG...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGACGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGRQRFL*QGLVSR
Trigger: TCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCG...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLRQRFL*QGLVSR
Trigger: TCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCG...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASALRTK*HALLLR
Trigger: ACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGC...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLALRTK*HALLLR
Trigger: ACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGC...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASCISAG*AQDEMP
Trigger: TGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTTGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLCISAG*AQDEMP
Trigger: TGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGACCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TTCGGCAGCGCTTCCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FGSASSDRAWSPDSRHQVVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...CACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTACTGGGGATGGATGGTaGCAGGGAGGAGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLTGDGW*QGGVLR
Trigger: CCTGAGTACTCCTCCCTGCCACCATCCATCCCCAGT...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTAGCACTGGGGATGGATaGTGGCAGGGAGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLSTGDG*WQGGVL
Trigger: GAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCT...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAGCACTGGGGATGGATaGTGGCAGGGAGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPSTGDG*WQGGVL
Trigger: GAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCCCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCGGCAGCGCTTCCTCTaGCAGGGCCTGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPRQRFL*QGLVSR
Trigger: TCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCG...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEPVRAA*QSHSPG
Trigger: GCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACCACGGTGTGCTGTGTaGAGACTGTTGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGPRCAV*RLLQKV
Trigger: TACCTTCTGCAACAGTCTGCACACAGCACACCGTGG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCCCTAGCTCCTTGGTaGCCCGAATGGCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLPLAPW*PEWLQC
Trigger: GCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGG...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTACCCCTAGCTCCTTGGTaGCCCGAATGGCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVPLAPW*PEWLQC
Trigger: GCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGG...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGTGCCAGGTGTCCAAGTaGACACCAATAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRCQVSK*TPIMEP
Trigger: GGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCGGCAGCGCTTCCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGAAGGTAGCCTCATTCTaGCCCTCGCAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: FGSASSDRAWSPDSRHQVKVASF*PSQSQK
Trigger: CTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTT...CACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTTGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLCSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGCTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCGGTACTGCAGGGATGTaGAGCTGGCGCAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPGTAGM*SWRRSG
Trigger: TCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACC...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGATTGCTTGAGGCCAGGTaGCAAGGGCAGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGLLEAR*QGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGTTGCTTGAGGCCAGGTaGCAAGGGCAGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLLLEAR*QGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQYAALA*GQVARA
Trigger: TGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATA...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQALRTK*HALLLR
Trigger: ACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGC...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTCCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACCCCTAGCTCCTTGGTaGCCCGAATGGCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEPLAPW*PEWLQC
Trigger: GCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CCAGGGGAGAAGTCAGCTTCTTCGGCAGCGCTTCCTCTGACAGGGCCTGGTCTCTGCCAGGTGTCCAAGTaGACACCAATAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGEKSASSAALPLTGPGLCQVSK*TPIMEP
Trigger: GGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA...GAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAAGAAGCTGACTTCTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTGCCAGGTGTCCAAGTaGACACCAATAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASCQVSK*TPIMEP
Trigger: GGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASQPSLL*STCLRP
Trigger: TGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAGTGGTTGCAGTTCATaGTCAGAACCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPSGCSS*SEPSPA
Trigger: AGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAAGGTAGCCTCATTCTaGCCCTCGCAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPKVASF*PSQSQK
Trigger: CTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCACAGCTCAGCAAGGTaGCTGAGGACTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASHSSAR*LRTCSG
Trigger: ACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGAATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGISQKC*PSPSSL
Trigger: CAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAAT...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRISQKC*PSPSSL
Trigger: CAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAAT...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGCTGCAGAACGTGTGGTaGTACTTGTCCAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: PIFSPGYECTPLRRPASRLQNVW*YLSRST
Trigger: TGTAGACCTGGACAAGTACCACCACACGTTCTGCAG...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASRLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTCTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAGGTACTGCAGGGATGTaGAGCTGGCGCAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEGTAGM*SWRRSG
Trigger: TCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACC...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCGGTACTGCAGGGATGTaGAGCTGGCGCAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PLPSLQQELTTCSASQESGTAGM*SWRRSG
Trigger: TCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACC...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTTTGCTTGAGGCCAGGTaGCAAGGGCAGGCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVLLEAR*QGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGTTGTCACCTTTGTGGTaGAGGAGCCCTGCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQLSPLW*RSPARS
Trigger: GCTCCTCGCAGGGCTCCTCCACCACAAAGGTGACAA...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS-3UTR TCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACCCAGGGCGATGGTGTaGAACACAACCCAGACACCC +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEPRAMV*NTTQTP
Trigger: GGGTGTCTGGGTTGTGTTTCACACCATCGCCCTGGG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024976.5
CDS-3UTR TCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPYAALA*GQVARA
Trigger: TGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATA...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLYAALA*GQVARA
Trigger: TGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATA...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTGCAGTTCATGCTCAGAACGAGGAAGGCTTAGCCTaGGTGCCATGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: CARRGHRGFPVVAVHAQNEEGLA*VPCGLG
Trigger: TCCCAACCCACATGGCACTCAGGCTAAGCCTTCCTC...GTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR GCA 90 bp CTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTGCAGTTCATGCTCAGAAGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: LCQEGAQGISSGCSSCSEALRTK*HALLLR
Trigger: ACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGC...TTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGT +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLALRTK*HALLLR
Trigger: ACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGC...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGATGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGCISAG*AQDEMP
Trigger: TGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTAATGTCAGTGTCCCATaGCAGGTGTCCAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLNVSVP*QVSKCT
Trigger: TGTGCACTTGGACACCTGGCATGGGACACTGACATT...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASLLCST*LRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTTTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLLLCST*LRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAA...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLGISSG*SSCSEP
Trigger: GGGTTCTGAGCATGAACTGCAACCACTGGAAATCCC...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASGISSG*SSCSEP
Trigger: GGGTTCTGAGCATGAACTGCAACCACTGGAAATCCC...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTGCAGTTCATGCTCAGAACACTGGGGATGGATGGTaGCAGGGAGGAGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: CARRGHRGFPVVAVHAQNTGDGW*QGGVLR
Trigger: CCTGAGTACTCCTCCCTGCCACCATCCATCCCCAGT...GTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCAGCACTGGGGATGGATaGTGGCAGGGAGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPSTGDG*WQGGVL
Trigger: GAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGAGCACTGGGGATGGATaGTGGCAGGGAGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLSTGDG*WQGGVL
Trigger: GAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCT...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCATCCCCTAGCTCCTTaGTGCCCCGAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPHPLAP*CPEWLQ
Trigger: CTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATG...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPISQKC*PSPSSL
Trigger: CAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAAT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GCGCTTCCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTCTGCAGAACGTGTGGTaGTACTTGTCCAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: ALPLTGPGLQTLGTRCSCLQNVW*YLSRST
Trigger: TGTAGACCTGGACAAGTACCACCACACGTTCTGCAG...ACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCTGCAGAACGTGTGGTaGTACTTGTCCAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASLQNVW*YLSRST
Trigger: TGTAGACCTGGACAAGTACCACCACACGTTCTGCAG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp ACTCTCGGCACCAGGTGTAGCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGACTCCATGTGAAAGCTaGCCTTGCGATTATCACAGC +
Preference number: 4 (lower is better)
Translates to: TLGTRCSCARRGHRGFPVTPCES*PCDYHS
Trigger: GCTGTGATAATCGCAAGGTCAGCTTTCACATGGAGT...CACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGCTACACCTGGTGCCGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp CCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTGCCAGGCAGCTATACTCCATGTaGAAGCTGACCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: PLTGPGLQTLGTRCSCARQLYSM*KLTLRL
Trigger: TAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTG...CCTGGCACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTTGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPCISAG*AQDEMP
Trigger: TGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCCACGGTGTGCTGTGTaGAGACTGTTGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCPRCAV*RLLQKV
Trigger: TACCTTCTGCAACAGTCTGCACACAGCACACCGTGG...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGCCACGGTGTGCTGTGTaGAGACTGTTGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQPRCAV*RLLQKV
Trigger: TACCTTCTGCAACAGTCTGCACACAGCACACCGTGG...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTAGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGCCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQQPSLL*STCLRP
Trigger: TGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTG...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTACTGGGGATGGATGGTaGCAGGGAGGAGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVTGDGW*QGGVLR
Trigger: CCTGAGTACTCCTCCCTGCCACCATCCATCCCCAGT...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATACTGGGGATGGATGGTaGCAGGGAGGAGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYTGDGW*QGGVLR
Trigger: CCTGAGTACTCCTCCCTGCCACCATCCATCCCCAGT...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTAGCACTGGGGATGGATaGTGGCAGGGAGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPSTGDG*WQGGVL
Trigger: GAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCT...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCAAGGTAGCCTCATTCTaGCCCTCGCAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCKVASF*PSQSQK
Trigger: CTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTT...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCACAGCTCAGCAAGGTaGCTGAGGACTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCHSSAR*LRTCSG
Trigger: ACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTG...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: PLPSLQQELTTCSASQESPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCRLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGTGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLCSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCTGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPCSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGCTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSPRDMNALPFVGQPPGLTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...AAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTAGCCTGAGTGCCATGTaGGTTGGGAGCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVSLSAM*VGSQEA
Trigger: AGCTTCCTGGCTCCCAACCCACATGGCACTCAGGCT...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCAGCTATACTCCATGTaGAAGCTGACCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASQLYSM*KLTLRL
Trigger: TAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTG...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTGCACTTCCTGTTCTTaGAGAATGTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASCTSCS*RMSVSH
Trigger: ATGGGACACTGACATTCTTCAAGAACAGGAAGTGCA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCCCACGGTGTGCTGTGTaGAGACTGTTGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSPRCAV*RLLQKV
Trigger: TACCTTCTGCAACAGTCTGCACACAGCACACCGTGG...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCCCCCTAGCTCCTTGGTaGCCCGAATGGCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLPLAPW*PEWLQC
Trigger: GCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGG...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATGCCAGGTGTCCAAGTaGACACCAATAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVCQVSK*TPIMEP
Trigger: GGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCAATGTCAGTGTCCCATaGCAGGTGTCCAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCNVSVP*QVSKCT
Trigger: TGTGCACTTGGACACCTGGCATGGGACACTGACATT...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGTTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQLLCST*LRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAA...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPQPSLL*STCLRP
Trigger: TGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTG...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLQPSLL*STCLRP
Trigger: TGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTG...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGAGTGGTTGCAGTTCATaGTCAGAACCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLSGCSS*SEPSPA
Trigger: AGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACT...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAGTGGTTGCAGTTCATaGTCAGAACCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGSGCSS*SEPSPA
Trigger: AGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACT...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GGGCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: GHPLPSLQQELTTCSASQGISSG*SSCSEP
Trigger: GGGTTCTGAGCATGAACTGCAACCACTGGAAATCCC...CTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTAAAGGTAGCCTCATTCTaGCCCTCGCAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVKVASF*PSQSQK
Trigger: CTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTT...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGGTAGCCTCATTCTaGCCCTCGCAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGKVASF*PSQSQK
Trigger: CTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTT...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTGCAGTTCATGCTCAGAACCACAGCTCAGCAAGGTaGCTGAGGACTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CARRGHRGFPVVAVHAQNHSSAR*LRTCSG
Trigger: ACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTG...GTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CCA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: QPIFSPGYECTPLRRPASVCAIH*RGHLDF
Trigger: GAAATCAAGATGACCTCTCCAGTGTATGGCACAGAC...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSRLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTTGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVCSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAATGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQECSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCCTTTCATGCTGCTCTTaGCAGCCGTGGAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPLSCCS*QPWSKP
Trigger: TGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAG...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAACCACGGTGTGCTGTGTaGAGACTGTTGCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQEPRCAV*RLLQKV
Trigger: TACCTTCTGCAACAGTCTGCACACAGCACACCGTGG...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCCCGAATGGCTGCAGTaGCACAGCTATACTCCATGT +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYPEWLQ*HSYTPC
Trigger: ACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGG...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTTGCCAGGTGTCCAAGTaGACACCAATAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPCQVSK*TPIMEP
Trigger: GGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCAATGTCAGTGTCCCATaGCAGGTGTCCAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPNVSVP*QVSKCT
Trigger: TGTGCACTTGGACACCTGGCATGGGACACTGACATT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGATTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGLLCST*LRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAA...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSGISSG*SSCSEP
Trigger: GGGTTCTGAGCATGAACTGCAACCACTGGAAATCCC...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAATCAAGCCCAGGGCGATaGTGTGAAACACAACCCAGA +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQESSPGR*CETQPR
Trigger: TCTGGGTTGTGTTTCACACCATCGCCCTGGGCTTGA...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024976.5
CDS-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCACAGCTCAGCAAGGTaGCTGAGGACTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLPSLQQELTTCSASQESHSSAR*LRTCSG
Trigger: ACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTG...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCACAGCTCAGCAAGGTaGCTGAGGACTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVHSSAR*LRTCSG
Trigger: ACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTG...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPISQKC*PSPSSL
Trigger: CAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAAT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCAGGGGGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: SPAALEGRERGRYLRSQGVCAIH*RGHLDF
Trigger: GAAATCAAGATGACCTCTCCAGTGTATGGCACAGAC...CCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGACTGCAGAACGTGTGGTaGTACTTGTCCAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGLQNVW*YLSRST
Trigger: TGTAGACCTGGACAAGTACCACCACACGTTCTGCAG...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTACTGCAGAACGTGTGGTaGTACTTGTCCAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVLQNVW*YLSRST
Trigger: TGTAGACCTGGACAAGTACCACCACACGTTCTGCAG...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQERLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVRLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGACTCCATGTGAAAGCTaGCCTTGCGATTATCACAGC +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLTPCES*PCDYHS
Trigger: GCTGTGATAATCGCAAGGTCAGCTTTCACATGGAGT...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTAACTCCATGTGAAAGCTaGCCTTGCGATTATCACAGC +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVTPCES*PCDYHS
Trigger: GCTGTGATAATCGCAAGGTCAGCTTTCACATGGAGT...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCAGCTATACTCCATGTaGAAGCTGACCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCQLYSM*KLTLRL
Trigger: TAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTG...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GGTGTAGCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTGCAGTTCATGTGCACTTCCTGTTCTTaGAGAATGTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GVAVPGGGTGDFQWLQFMCTSCS*RMSVSH
Trigger: ATGGGACACTGACATTCTTCAAGAACAGGAAGTGCA...CATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGCTACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR TCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLWRRSG*LSCCSW
Trigger: CCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCA...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAATGTCAGTGTCCCATaGCAGGTGTCCAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: HPLPSLQQELTTCSASQENVSVP*QVSKCT
Trigger: TGTGCACTTGGACACCTGGCATGGGACACTGACATT...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATTTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYLLCST*LRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAA...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCCCTTGGTGCCCCGAATaGCTGCAGTGCCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLPWCPE*LQCHSY
Trigger: ATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGG...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYISQKC*PSPSSL
Trigger: CAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAAT...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LPSLQQELTTCSASQESPTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCCAGCTATACTCCATGTaGAAGCTGACCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSQLYSM*KLTLRL
Trigger: TAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTG...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGTGCACTTCCTGTTCTTaGAGAATGTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SWPQGDREKPGPQFFPLLCTSCS*RMSVSH
Trigger: ATGGGACACTGACATTCTTCAAGAACAGGAAGTGCA...CAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATGCACTTCCTGTTCTTaGAGAATGTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVCTSCS*RMSVSH
Trigger: ATGGGACACTGACATTCTTCAAGAACAGGAAGTGCA...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGATGCACTTCCTGTTCTTaGAGAATGTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: APTAISAAGADNMQCKSGCTSCS*RMSVSH
Trigger: ATGGGACACTGACATTCTTCAAGAACAGGAAGTGCA...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCGTCCTTGCCACGGTGTaGTGTGTGCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLVLATV*CVQTVA
Trigger: TGCAACAGTCTGCACACAGCACACCGTGGCAAGGAC...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSVCAIH*RGHLDF
Trigger: GAAATCAAGATGACCTCTCCAGTGTATGGCACAGAC...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCTGCTCTTGGCAGCCGTaGAGCAAACCATCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLCSWQP*SKPSGR
Trigger: TCTACCCGATGGTTTGCTCCACGGCTGCCAAGAGCA...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVTGDFQ*LQFMLR
Trigger: TCTGAGCATGAACTGCAACCACTGGAAATCCCCTGT...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR GCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCAGTGGTTGCAGTTCATaGTCAGAACCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLSGCSS*SEPSPA
Trigger: AGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACT...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: TSVLPSPAALEGRERGRYVCAIH*RGHLDF
Trigger: GAAATCAAGATGACCTCTCCAGTGTATGGCACAGAC...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: PLPSLQQELTTCSASQESVCAIH*RGHLDF
Trigger: GAAATCAAGATGACCTCTCCAGTGTATGGCACAGAC...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCAGGCTGCAGAACGTGTaGTGGTACTTGTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLRLQNV*WYLSRS
Trigger: AGACCTGGACAAGTACCACCACACGTTCTGCAGCCT...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR TCA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCCAGCTATACTCCATGTaGAAGCTGACCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLQLYSM*KLTLRL
Trigger: TAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTG...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 90 bp CCGCCGGCCGCCGGGCCTGACCGGGCTGGGCCGGCGCGGCTCACCTaGGGCCAAAAAGCTCCCCCGGCGCTGACCCACTTTCCGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PPAAGPDRAGPARLT*GQKAPPALTHFPFR
Trigger: CCGGAACGGAAAGTGGGTCAGCGCCGGGGGAGCTTTTTGGCCGCAGGTGAGCCGCGCCGGCCCAGCCCGGTCAGGCCCGGCGGCCGGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS TCA 90 bp GGCCGGCTTGACCGCCTGCAAGGTCAACCCGCCGGCCGCCGGGCCTaGCCGGGCTGGGCCGGCGCGGCTCACCTGCGGCCAAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRLDRLQGQPAGRRA*PGWAGAAHLRPKSS
Trigger: GGAGCTTTTTGGCCGCAGGTGAGCCGCGCCGGCCCAGCCCGGTCAGGCCCGGCGGCCGGCGGGTTGACCTTGCAGGCGGTCAAGCCGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS GCA 90 bp GCTGCCTGCCAGAGCCACAGCCCGGGCATCTGTATCTCGGCGGGCTaGGCTCAGGACGAAATGCCATGCCCTGCTACTCCGTGTACGCCG +
Preference number: 5 (lower is better)
Translates to: AACQSHSPGICISAG*AQDEMPCPATPCTP
Trigger: CGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACAGATGCCCGGGCTGTGGCTCTGGCAGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 90 bp GTCGCTGTGCTGCCCATCAGAGTCATAGCCCCAGTTAGAGCTGCCTaGCAGAGCCACAGCCCGGGCATCTGTATCTCGGCGGGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: VAVLPIRVIAPVRAA*QSHSPGICISAGCA
Trigger: AGCGCAGCCCGCCGAGATACAGATGCCCGGGCTGTGGCTCTGGCAGGCAGCTCTAACTGGGGCTATGACTCTGATGGGCAGCACAGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp TTGCTTGAGGCCAGGTGGCAAGGGCAGGCCCTCGAGGGTGTCCCCTaGATTTGGCCGCAGTTGGCGCAAGCGGTAGCAGCACAGGTACTG +
Preference number: 5 (lower is better)
Translates to: LLEARWQGQALEGVP*IWPQLAQAVAAQVL
Trigger: CAGTACCTGTGCTGCTACCGCTTGCGCCAACTGCGGCCAAATTCAGGGGACACCCTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 90 bp CCGGGCATCTGTATCTCGGCGGGCTGCGCTCAGGACGAAATGCCATaGCCTGCTACTCCGTGTACGCCGGGCCATAGTGGAGAGAACCTG +
Preference number: 5 (lower is better)
Translates to: PGICISAGCAQDEMP*PATPCTPGHSGENL
Trigger: CAGGTTCTCTCCACTATGGCCCGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACAGATGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024976.5
CDS GCA 90 bp ACAGCCCGGGCATCTGTATCTCGGCGGGCTGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGTGTACGCCGGGCCATAGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: TARASVSRRAALRTK*HALLLRVRRAIVER
Trigger: TCTCTCCACTATGGCCCGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACAGATGCCCGGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024976.5
ENSMUST00000168265.8
CDS GCA 90 bp CCGGGCATCTGTATCTCGGCGGGCTGCGCTCAGGACGAAATGCCATaGCCTGCTACTCCGTGTACGCCGGGCCATAGTGGAGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: PGICISAGCAQDEMP*PATPCTPGHSGENL
Trigger: GAGGTTCTCTCCACTATGGCCCGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACAGATGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS CCA 90 bp GGCCCTCGCAGTCACAGAAGGACTCTCCTGTCACAGGCACAGCACTaGGGATGGATGGTGGCAGGGAGGAGTACTCAGGGTCAGAGTCGG +
Preference number: 5 (lower is better)
Translates to: GPRSHRRTLLSQAQH*GWMVAGRSTQGQSR
Trigger: CCGACTCTGACCCTGAGTACTCCTCCCTGCCACCATCCATCCCCAGTGCTGTGCCTGTGACAGGAGAGTCCTTCTGTGACTGCGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGACTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGLVLSP*WWRSPV
Trigger: CACTGGGCTCCTCCACCACAAAGGTGACAAGACGAG...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGTAGCTGTGCCAGGAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACC +
Preference number: 5 (lower is better)
Translates to: PLTGPGLQTLGTRCSCARKVAED*FRSSQT
Trigger: GGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTT...CCTGGCACAGCTACACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CAA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACC +
Preference number: 5 (lower is better)
Translates to: PIFSPGYECTPLRRPASRKVAED*FRSSQT
Trigger: GGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTT...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGACTTTCATGCTGCTCTaGGCAGCCGTGGAGCAAACC +
Preference number: 5 (lower is better)
Translates to: PIFSPGYECTPLRRPASRTFMLL*AAVEQT
Trigger: GGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGT...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp AGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCTTATGCAGCACTTGCTaGAGGCCAGGTGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SPSSPRDMNALPFVGQPPLCSTC*RPGGKG
Trigger: GCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAA...GGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCTTATGCAGCACTTGCTaGAGGCCAGGTGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QPIFSPGYECTPLRRPASLCSTC*RPGGKG
Trigger: GCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAA...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp AGCAGCACAGGTACTGCAGGGATGTGGAGCTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGGCAGCCGTGGAGCAAACCATCGGGT +
Preference number: 5 (lower is better)
Translates to: SSTGTAGMWSWRRSG*LSCCSWQPWSKPSG
Trigger: ACCCGATGGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACCTGTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 90 bp TTGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATGCAGCACTTaGTTGAGGCCAGGTGGCAAGGGCAGGCCCTCGAGGGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LQFMLRTQPSLLCST*LRPGGKGRPSRVSP
Trigger: AGGGGACACCCTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 90 bp CCCTGGCCAAAGCGTGAAGAGAAGCTCGTCTTGTCACCTTTGTGGTaGAGGAGCCCTGCGAGGAGCAATGGGGTGATCCTGGGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PWPKREEKLVLSPLW*RSPARSNGVILGGL
Trigger: CAGACCTCCCAGGATCACCCCATTGCTCCTCGCAGGGCTCCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS-3UTR CAA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGAGAAGAGAAGCTCGTCTaGTCACCTTTGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGEEKLV*SPLWWR
Trigger: CCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTC...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGAAGAGAAGCTCGTCTaGTCACCTTTGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PIFSPGYECTPLRRPASREEKLV*SPLWWR
Trigger: CCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTC...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: PIFSPGYECTPLRRPASRRTQPS*LCSTCL
Trigger: CAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCT...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCCTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCLVLSP*WWRSPA
Trigger: CGCAGGGCTCCTCCACCACAAAGGTGACAAGACGAG...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS TCA 90 bp AGTTCATGCTCAGAACCCAGCCCAGCTTGTTATGCAGCACTTGCTTaGGGCCAGGTGGCAAGGGCAGGCCCTCGAGGGTGTCCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSCSEPSPACYAALA*GQVARAGPRGCPLN
Trigger: ATTCAGGGGACACCCTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 90 bp TTCCAGTGGTTGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCAGGTGGCAAGGGCAGGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: FQWLQFMLRTQPSLL*STCLRPGGKGRPSR
Trigger: CCTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 90 bp GCACCAGGTGTAGCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTaGTTGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATGCAGC +
Preference number: 5 (lower is better)
Translates to: APGVAVPGGGTGDFQ*LQFMLRTQPSLLCS
Trigger: GCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGCTACACCTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGGCTTGGAGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SPRDMNALPFVGQPPGLGVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...TCCAAGCCCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CAGCCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: QPIFSPGYECTPLRRPASRTQPS*LCSTCL
Trigger: CAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCT...GGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACC +
Preference number: 5 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCKVAED*FRSSQT
Trigger: GGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTT...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TTCGGCAGCGCTTCCTCTGACAGGGCCTGGTCTCCAGACTCTCGGCACCAGGTGACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: FGSASSDRAWSPDSRHQVTGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...CACCTGGTGCCGAGAGTCTGGAGACCAGGCCCTGTCAGAGGAAGCGCTGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS-3UTR CAA 90 bp CCCATCTTCTCCCCGGGATATGAATGCACTCCCCTTCGTCGGCCAGCCTCCCGGACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: PIFSPGYECTPLRRPASRTGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...CCGGGAGGCTGGCCGACGAAGGGGAGTGCATTCATATCCCGGGGAGAAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLLVLSP*WWRSPV
Trigger: CACTGGGCTCCTCCACCACAAAGGTGACAAGACGAG...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTACTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVLVLSP*WWRSPV
Trigger: CACTGGGCTCCTCCACCACAAAGGTGACAAGACGAG...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGCACTTTCATGCTGCTCTaGGCAGCCGTGGAGCAAACC +
Preference number: 5 (lower is better)
Translates to: GLREIGKSLDLSSSLSCCTFMLL*AAVEQT
Trigger: GGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGT...GCAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGATTATGCAGCACTTGCTaGAGGCCAGGTGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: APTAISAAGADNMQCKSGLCSTC*RPGGKG
Trigger: GCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAA...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCAGGGGAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SPAALEGRERGRYLRSQGRTQPS*LCSTCL
Trigger: CAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCT...CCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCACTCCACAGCAGTaGGGTTGGCTGAGCGCCGTA +
Preference number: 5 (lower is better)
Translates to: HPLPSLQQELTTCSASQESTPQQ*GWLSAV
Trigger: TACGGCGCTCAGCCAACCCAACTGCTGTGGAGTGCT...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS TCA 90 bp CCAGGTGTCCAAGTGCACACCAATAATGGAGCCCTGGCCAAAGCGTaGAGAGAAGCTCGTCTTGTCACCTTTGTGGTGGAGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PGVQVHTNNGALAKA*REARLVTFVVEEPC
Trigger: GCAGGGCTCCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGGCTCCATTATTGGTGTGCACTTGGACACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS-3UTR CAA 90 bp TGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACC +
Preference number: 5 (lower is better)
Translates to: CPGLREIGKSLDLSSSLSKVAED*FRSSQT
Trigger: GGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTT...GGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GCACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACC +
Preference number: 5 (lower is better)
Translates to: APTAISAAGADNMQCKSGKVAED*FRSSQT
Trigger: GGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTT...TCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPLVLSP*WWRSPV
Trigger: CACTGGGCTCCTCCACCACAAAGGTGACAAGACGAG...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCTCGTCTTGTCACCTTaGTGGTGGAGGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVLVLSP*WWRSPV
Trigger: CACTGGGCTCCTCCACCACAAAGGTGACAAGACGAG...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTCCCAGGGGGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SPAALEGRERGRYLRSQGVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...CCCCTGGGAACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCACTTTCATGCTGCTCTaGGCAGCCGTGGAGCAAACC +
Preference number: 5 (lower is better)
Translates to: LPSLQQELTTCSASQESPTFMLL*AAVEQT
Trigger: GGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGACTTTCATGCTGCTCTaGGCAGCCGTGGAGCAAACC +
Preference number: 5 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLTFMLL*AAVEQT
Trigger: GGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGT...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAATTATGCAGCACTTGCTaGAGGCCAGGTGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: HPLPSLQQELTTCSASQELCSTC*RPGGKG
Trigger: GCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAA...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATTTATGCAGCACTTGCTaGAGGCCAGGTGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TSVLPSPAALEGRERGRYLCSTC*RPGGKG
Trigger: GCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAA...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp TGGCTCGAGTATCTGAGCACCTCAATCAAGCCCAGGGCGATGGTGTaGAACACAACCCAGACACCCATGACTTTGGATGTGTCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WLEYLSTSIKPRAMV*NTTQTPMTLDVSQP
Trigger: GGGCTGGGACACATCCAAAGTCATGGGTGTCTGGGTTGTGTTTCACACCATCGCCCTGGGCTTGATTGAGGTGCTCAGATACTCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024976.5
CDS TCA 90 bp CCAGGTGTCCAAGTGCACACCAATAATGGAGCCCTGGCCAAAGCGTaGAGAGAAGCTCGTCTTGTCACCTTTGTGGTGGAGGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: PGVQVHTNNGALAKA*REARLVTFVVEEPS
Trigger: ACTGGGCTCCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGGCTCCATTATTGGTGTGCACTTGGACACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 90 bp TCTGTGCCATACACTGGAGAGGTCATCTTGATTTCCCAGAAGTGTTaGCCATCCCCTAGCTCCTTGGTGCCCCGAATGGCTGCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SVPYTGEVILISQKC*PSPSSLVPRMAAVP
Trigger: TGGCACTGCAGCCATTCGGGGCACCAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAATCAAGATGACCTCTCCAGTGTATGGCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTACTTTCATGCTGCTCTaGGCAGCCGTGGAGCAAACC +
Preference number: 5 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVTFMLL*AAVEQT
Trigger: GGTTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGT...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp TCCTTGGTGCCCCGAATGGCTGCAGTGCCACAGCTATACTCCATGTaGAAGCTGACCTTGCGATTATCACAGCTCAGCAAGGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLVPRMAAVPQLYSM*KLTLRLSQLSKVAE
Trigger: CTCAGCCACCTTGCTGAGCTGTGATAATCGCAAGGTCAGCTTTCACATGGAGTATAGCTGTGGCACTGCAGCCATTCGGGGCACCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp CAATGCCCACCATCATGTCTGTGCCATACACTGGAGAGGTCATCTTaGTTTCCCAGAAGTGTTGGCCATCCCCTAGCTCCTTGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: QCPPSCLCHTLERSS*FPRSVGHPLAPWCP
Trigger: GGGGCACCAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAATCAAGATGACCTCTCCAGTGTATGGCACAGACATGATGGTGGGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 90 bp AGTGTCCCATGCCAGGTGTCCAAGTGCACACCAATAATGGAGCCCTaGCCAAAGCGTGAAGAGAAGCTCGTCTTGTCACCTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SVPCQVSKCTPIMEP*PKREEKLVLSPLWW
Trigger: CCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGGCTCCATTATTGGTGTGCACTTGGACACCTGGCATGGGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAGAAGAGAAGCTCGTCTaGTCACCTTTGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HPLPSLQQELTTCSASQEEEKLV*SPLWWR
Trigger: CCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTC...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp ACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATGAAGAGAAGCTCGTCTaGTCACCTTTGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TSVLPSPAALEGRERGRYEEKLV*SPLWWR
Trigger: CCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTC...ATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCGAAGAGAAGCTCGTCTaGTCACCTTTGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLPSLQQELTTCSASQESEEKLV*SPLWWR
Trigger: CCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTC...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp GACCTCAGTTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTAGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: DLSSSLSCCPGRARKRKVVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...TACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAACTGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTCTCCTGCTGGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: WPQGDREKPGPQFFPLLLVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...CAGCAGGAGAGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPRTQPS*LCSTCL
Trigger: CAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCT...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCCCCACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: LPSLQQELTTCSASQESPTGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...GGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAAGCGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PLPSLQQELTTCSASQESVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...GCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TTCTTCCCTCTCCTGCTGCCCTGGAAGGGCGAGAAAGAGGAAGGTATCTGCGTTGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: FFPLLLPWKGEKEEGICVVEPSV*KPSSSH
Trigger: GTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTAC...AACGCAGATACCTTCCTCTTTCTCGCCCTTCCAGGGCAGCAGGAGAGGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp AGACTGTCCTGGCCTCAGGGAGATAGGGAAAAGCCTGGACCTCAGTTCTTCCCTACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: RLSWPQGDREKPGPQFFPTGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...AGGGAAGAACTGAGGTCCAGGCTTTTCCCTATCTCCCTGAGGCCAGGACAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp CACCCACTGCCATCTCTGCAGCAGGAGCTGACAACATGCAGTGCAAGTCAGGAAACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: HPLPSLQQELTTCSASQETGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...TTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGAGATGGCAGTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTG +
Preference number: 5 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLRTQPS*LCSTCL
Trigger: CAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCT...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 90 bp CATGTGAAAGCTGACCTTGCGATTATCACAGCTCAGCAAGGTGGCTaGGGACTTGTTCAGGTCATCCCAGACCCAATCAAAATCCTCATC +
Preference number: 5 (lower is better)
Translates to: HVKADLAIITAQQGG*GLVQVIPDPIKILI
Trigger: GATGAGGATTTTGATTGGGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTGATAATCGCAAGGTCAGCTTTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS-3UTR CAA 90 bp TATAACATAGAGGGACAAGACAAAACCCCTTCACAGGGCACCCACTGCCATCTCACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: YNIEGQDKTPSQGTHCHLTGEVI*ISQKCW
Trigger: CCAACACTTCTGGGAAATCAAGATGACCTCTCCAGT...GAGATGGCAGTGGGTGCCCTGTGAAGGGGTTTTGTCTTGTCCCTCTATGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp CCCAGACTCCCGAGCGCCACCGCCAGGGAACAACGGGTGGCCGGCTaGACCGCCTGCAAGGTCAACCCGCCGGCCGCCGGGCCTGACCGG +
Preference number: 6 (lower is better)
Translates to: PRLPSATAREQRVAG*TACKVNPPAAGPDR
Trigger: CCGGTCAGGCCCGGCGGCCGGCGGGTTGACCTTGCAGGCGGTCAAGCCGGCCACCCGTTGTTCCCTGGCGGTGGCGCTCGGGAGTCTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS GCA 72 bp GCCGGGCCTGACCGGGCTGGGCCGGCGCGGCTCACCTaGGGCCAAAAAGCTCCCCCGGCGCTGACCCACTTT +
Preference number: 6 (lower is better)
Translates to: AGPDRAGPARLT*GQKAPPALTHF
Trigger: AAAGTGGGTCAGCGCCGGGGGAGCTTTTTGGCCGCAGGTGAGCCGCGCCGGCCCAGCCCGGTCAGGCCCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS TCA 72 bp CGCGGATCTCGCCACAGCGATGCCGTCCCTGACGCCTaGCTCCGAGGCCCCCGCCCAGACTCCCGAGCGCCA +
Preference number: 6 (lower is better)
Translates to: RGSRHSDAVPDA*LRGPRPDSRAP
Trigger: TGGCGCTCGGGAGTCTGGGCGGGGGCCTCGGAGTCAGGCGTCAGGGACGGCATCGCTGTGGCGAGATCCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS TCA 72 bp GCCAGGTGGCAAGGGCAGGCCCTCGAGGGTGTCCCCTaGATTTGGCCGCAGTTGGCGCAAGCGGTAGCAGCA +
Preference number: 6 (lower is better)
Translates to: ARWQGQALEGVP*IWPQLAQAVAA
Trigger: TGCTGCTACCGCTTGCGCCAACTGCGGCCAAATTCAGGGGACACCCTCGAGGGCCTGCCCTTGCCACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 72 bp CGCGGCTCACCTGCGGCCAAAAAGCTCCCCCGGCGCTaGCCCACTTTCCGTTCCGGCCGCGACGCAAACAAT +
Preference number: 6 (lower is better)
Translates to: RGSPAAKKLPRR*PTFRSGRDANN
Trigger: ATTGTTTGCGTCGCGGCCGGAACGGAAAGTGGGTCAGCGCCGGGGGAGCTTTTTGGCCGCAGGTGAGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168265.8
CDS CAA 72 bp GTGGCAAGGGCAGGCCCTCGAGGGTGTCCCCTGAATTaGGCCGCAGTTGGCGCAAGCGGTAGCAGCACAGGT +
Preference number: 6 (lower is better)
Translates to: VARAGPRGCPLN*AAVGASGSSTG
Trigger: ACCTGTGCTGCTACCGCTTGCGCCAACTGCGGCCAAATTCAGGGGACACCCTCGAGGGCCTGCCCTTGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 72 bp TGTATCTCGGCGGGCTGCGCTCAGGACGAAATGCCATaGCCTGCTACTCCGTGTACGCCGGGCCATAGTGGA +
Preference number: 6 (lower is better)
Translates to: CISAGCAQDEMP*PATPCTPGHSG
Trigger: TCCACTATGGCCCGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024976.5
ENSMUST00000168265.8
CDS GCA 72 bp GCATCTGTATCTCGGCGGGCTGCGCTCAGGACGAAATaGCATGCCCTGCTACTCCGTGTACGCCGGGCCATA +
Preference number: 6 (lower is better)
Translates to: ASVSRRAALRTK*HALLLRVRRAI
Trigger: TATGGCCCGGCGTACACGGAGTAGCAGGGCATGGCATTTCGTCCTGAGCGCAGCCCGCCGAGATACAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024976.5
ENSMUST00000168265.8
CDS CAA 90 bp GTTGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATGCAGCACTaGCTTGAGGCCAGGTGGCAAGGGCAGGCCCTCGAGGGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: VAVHAQNPAQLVMQH*LEARWQGQALEGVP
Trigger: GGGGACACCCTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp TCCCTGCCCAGCAGGCTGCAGAACGTGTGGTGGTACTaGTCCAGGTCTACATCCGACGTCCCAATGCCCACC +
Preference number: 6 (lower is better)
Translates to: SLPSRLQNVWWY*SRSTSDVPMPT
Trigger: GGTGGGCATTGGGACGTCGGATGTAGACCTGGACAAGTACCACCACACGTTCTGCAGCCTGCTGGGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp CATGCTCAGAACCCAGCCCAGCTTGTTATGCAGCACTaGCTTGAGGCCAGGTGGCAAGGGCAGGCCCTCGAG +
Preference number: 6 (lower is better)
Translates to: HAQNPAQLVMQH*LEARWQGQALE
Trigger: CTCGAGGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 72 bp GGTACTGCAGGGATGTGGAGCTGGCGCAGGAGCGGATaGCTTTCATGCTGCTCTTGGCAGCCGTGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: GTAGMWSWRRSG*LSCCSWQPWSK
Trigger: TTTGCTCCACGGCTGCCAAGAGCAGCATGAAAGTCATCCGCTCCTGCGCCAGCTCCACATCCCTGCAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 72 bp CCACTCCTGGGAGGAAGGCTTAGCCTGAGTGCCATGTaGGTTGGGAGCCAGGAAGCTCCTCCTATGCACTTC +
Preference number: 6 (lower is better)
Translates to: PLLGGRLSLSAM*VGSQEAPPMHF
Trigger: GAAGTGCATAGGAGGAGCTTCCTGGCTCCCAACCCACATGGCACTCAGGCTAAGCCTTCCTCCCAGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS CAA 72 bp CGGCAGTCCTTGCCACGGTGTGCTGTGTGCAGACTGTaGCAGAAGGTAGCCTCATTCTGGCCCTCGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RQSLPRCAVCRL*QKVASFWPSQS
Trigger: TGACTGCGAGGGCCAGAATGAGGCTACCTTCTGCAACAGTCTGCACACAGCACACCGTGGCAAGGACTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp TCACCACACCGGCAGTCCTTGCCACGGTGTGCTGTGTGCAGACTGTaGCAGAAGGTAGCCTCATTCTGGCCCTCGCAGTCACAGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SPHRQSLPRCAVCRL*QKVASFWPSQSQKD
Trigger: GTCCTTCTGTGACTGCGAGGGCCAGAATGAGGCTACCTTCTGCAACAGTCTGCACACAGCACACCGTGGCAAGGACTGCCGGTGTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp GGGGATTTCCAGTGGTTGCAGTTCATGCTCAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTGAGGCCAGGTGGCAAGGGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GDFQWLQFMLRTQPS*LCSTCLRPGGKGRP
Trigger: GGGCCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp CCAGGTGTAGCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTaGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATGCAGCACT +
Preference number: 6 (lower is better)
Translates to: PGVAVPGGGTGDFQW*QFMLRTQPSLLCST
Trigger: AGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGCTACACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp GCTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTaGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: AVPGGGTGDFQW*QFMLRTQPSLL
Trigger: TAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 72 bp CAAAATCCTCATCCTCCTCACCACACCGGCAGTCCTTaGCACGGTGTGCTGTGTGCAGACTGTTGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QNPHPPHHTGSP*HGVLCADCCRR
Trigger: CCTTCTGCAACAGTCTGCACACAGCACACCGTGGCAAGGACTGCCGGTGTGGTGAGGAGGATGAGGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 72 bp TTGCAGTTCATGCTCAGAACCCAGCCCAGCTTGTTATaGAGCACTTGCTTGAGGCCAGGTGGCAAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: LQFMLRTQPSLL*STCLRPGGKGR
Trigger: CCTGCCCTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS GCA 72 bp CTGTGCCAGGAGGGGGCACAGGGGATTTCCAGTGGTTaGAGTTCATGCTCAGAACCCAGCCCAGCTTGTTAT +
Preference number: 6 (lower is better)
Translates to: LCQEGAQGISSG*SSCSEPSPACY
Trigger: ATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTGGAAATCCCCTGTGCCCCCTCCTGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 72 bp AAGCGTGAAGAGAAGCTCGTCTTGTCACCTTTGTGGTaGAGGAGCCCTGCGAGGAGCAATGGGGTGATCCTG +
Preference number: 6 (lower is better)
Translates to: KREEKLVLSPLW*RSPARSNGVIL
Trigger: CAGGATCACCCCATTGCTCCTCGCAGGGCTCCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS CCA 72 bp CCAAAGCGTGAAGAGAAGCTCGTCTTGTCACCTTTGTaGTGGAGGAGCCCTGCGAGGAGCAATGGGGTGATC +
Preference number: 6 (lower is better)
Translates to: PKREEKLVLSPL*WRSPARSNGVI
Trigger: GATCACCCCATTGCTCCTCGCAGGGCTCCTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119829.8
CDS GCA 72 bp GGTGGTACTTGTCCAGGTCTACATCCGACGTCCCAATaGCCACCATCATGTCTGTGCCATACACTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GGTCPGLHPTSQ*PPSCLCHTLER
Trigger: CCTCTCCAGTGTATGGCACAGACATGATGGTGGGCATTGGGACGTCGGATGTAGACCTGGACAAGTACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp CAGTGGTTGCAGTTCATGCTCAGAACCCAGCCCAGCTaGTTATGCAGCACTTGCTTGAGGCCAGGTGGCAAG +
Preference number: 6 (lower is better)
Translates to: QWLQFMLRTQPS*LCSTCLRPGGK
Trigger: CTTGCCACCTGGCCTCAAGCAAGTGCTGCATAACAAGCTGGGCTGGGTTCTGAGCATGAACTGCAACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp CCAATGCCCACCATCATGTCTGTGCCATACACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGGCCATCCCCTAGCTCCTTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: PMPTIMSVPYTGEVI*ISQKCWPSPSSLVP
Trigger: GGGCACCAAGGAGCTAGGGGATGGCCAACACTTCTGGGAAATCAAGATGACCTCTCCAGTGTATGGCACAGACATGATGGTGGGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 72 bp TGCCAGGTGTCCAAGTGCACACCAATAATGGAGCCCTaGCCAAAGCGTGAAGAGAAGCTCGTCTTGTCACCT +
Preference number: 6 (lower is better)
Translates to: CQVSKCTPIMEP*PKREEKLVLSP
Trigger: AGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGGCTCCATTATTGGTGTGCACTTGGACACCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp GGGAGCCAGGAAGCTCCTCCTATGCACTTCCTGTTCTaGAAGAATGTCAGTGTCCCATGCCAGGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: GSQEAPPMHFLF*KNVSVPCQVSK
Trigger: CTTGGACACCTGGCATGGGACACTGACATTCTTCAAGAACAGGAAGTGCATAGGAGGAGCTTCCTGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS CAA 90 bp ATGTGGGTTGGGAGCCAGGAAGCTCCTCCTATGCACTTCCTGTTCTaGAAGAATGTCAGTGTCCCATGCCAGGTGTCCAAGTGCACACCA +
Preference number: 6 (lower is better)
Translates to: MWVGSQEAPPMHFLF*KNVSVPCQVSKCTP
Trigger: TGGTGTGCACTTGGACACCTGGCATGGGACACTGACATTCTTCAAGAACAGGAAGTGCATAGGAGGAGCTTCCTGGCTCCCAACCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068508.13
CDS TCA 72 bp CAAGTGCACACCAATAATGGAGCCCTGGCCAAAGCGTaGAGAGAAGCTCGTCTTGTCACCTTTGTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: QVHTNNGALAKA*REARLVTFVVE
Trigger: CTCCACCACAAAGGTGACAAGACGAGCTTCTCTTCACGCTTTGGCCAGGGCTCCATTATTGGTGTGCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CCA 72 bp CGTCCCAATGCCCACCATCATGTCTGTGCCATACACTaGAGAGGTCATCTTGATTTCCCAGAAGTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: RPNAHHHVCAIH*RGHLDFPEVLA
Trigger: GGCCAACACTTCTGGGAAATCAAGATGACCTCTCCAGTGTATGGCACAGACATGATGGTGGGCATTGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp AGCCGAGTAGCAGCCACTCCTATGCACTTCCTGTTCTaGAAGAATGTCAGTGTCCCATGCCAGGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SRVAATPMHFLF*KNVSVPCQVSK
Trigger: CTTGGACACCTGGCATGGGACACTGACATTCTTCAAGAACAGGAAGTGCATAGGAGTGGCTGCTACTCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp AGCCGTGGAGCAAACCATCGGGTAGAACCTTCTGTTTaGAAGCCGAGTAGCAGCCACTCCTATGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: SRGANHRVEPSV*KPSSSHSYALP
Trigger: AGGAAGTGCATAGGAGTGGCTGCTACTCGGCTTCAAAACAGAAGGTTCTACCCGATGGTTTGCTCCACGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000024976.5
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS TCA 72 bp GCTGACCTTGCGATTATCACAGCTCAGCAAGGTGGCTaGGGACTTGTTCAGGTCATCCCAGACCCAATCAAA +
Preference number: 6 (lower is better)
Translates to: ADLAIITAQQGG*GLVQVIPDPIK
Trigger: TTTGATTGGGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTGATAATCGCAAGGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp ACCATCATGTCTGTGCCATACACTGGAGAGGTCATCTaGATTTCCCAGAAGTGTTGGCCATCCCCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: TIMSVPYTGEVI*ISQKCWPSPSS
Trigger: GGAGCTAGGGGATGGCCAACACTTCTGGGAAATCAAGATGACCTCTCCAGTGTATGGCACAGACATGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 90 bp AAGCTGACCTTGCGATTATCACAGCTCAGCAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACCCAATCAAAATCCTCATCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: KLTLRLSQLSKVAED*FRSSQTQSKSSSSS
Trigger: TGAGGAGGATGAGGATTTTGATTGGGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTGATAATCGCAAGGTCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8
CDS CAA 72 bp TTGCGATTATCACAGCTCAGCAAGGTGGCTGAGGACTaGTTCAGGTCATCCCAGACCCAATCAAAATCCTCA +
Preference number: 6 (lower is better)
Translates to: LRLSQLSKVAED*FRSSQTQSKSS
Trigger: TGAGGATTTTGATTGGGTCTGGGATGACCTGAACAAGTCCTCAGCCACCTTGCTGAGCTGTGATAATCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024976.5
ENSMUST00000068508.13
ENSMUST00000117890.8
ENSMUST00000119829.8
ENSMUST00000120943.8
ENSMUST00000168265.8