Pregenerated sensors for SPSB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039911Ensembl transcript IDs: ENSMUST00000038562.9, ENSMUST00000105684.2, ENSMUST00000105685.2, ENSMUST00000156897.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAACGGGCTCAGTaGCTTGGCACCAGGTGGCTGTCGTATGGCGGTCCTGGGATTTGG | + |
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Preference number: 1 (lower is better) Translates to: ASIPGAGVGGPQRAQ*LGTRWLSYGGPGIW Trigger: CCAAATCCCAGGACCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTGCGCCTGGGATGGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CCA 90 bp | GACGGGATGTCAGGGAGGTGTGGCGAGTCCTGGGGTGGTGGAGTATaGGGGACACAGGAGAGCCTGGAAATTCACCAGCATGCATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: DGMSGRCGESWGGGV*GTQESLEIHQHAWE Trigger: CTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCACCACCCCAGGACTCGCCACACCTCCCTGACATCCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | CACCAGCTCATGTGCCACAGTCCTGGCCTGGGACAAGGACAGGTGTaGCACACACATTCCAGGGAGGTGGGGGAAAGCACATCGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: HQLMCHSPGLGQGQV*HTHSREVGESTSRE Trigger: TTCCCTCGATGTGCTTTCCCCCACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | CAGAAGCAGGGACCTGGGGACATGGGGACTTGCACGGGCCTCTCTTaGGGTCTGCTCTGGTGCTTGGTGCAGGGCTACTTAGGAACTAGT | + |
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Preference number: 1 (lower is better) Translates to: QKQGPGDMGTCTGLS*GLLWCLVQGYLGTS Trigger: ACTAGTTCCTAAGTAGCCCTGCACCAAGCACCAGAGCAGACCCCAAGAGAGGCCCGTGCAAGTCCCCATGTCCCCAGGTCCCTGCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | CTTTACGGTGCTGGTGACGGGATGTCAGGGAGGTGTGGCGAGTCCTaGGGTGGTGGAGTATGGGGGACACAGGAGAGCCTGGAAATTCAC | + |
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Preference number: 1 (lower is better) Translates to: LYGAGDGMSGRCGES*GGGVWGTQESLEIH Trigger: GTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCACCACCCCAGGACTCGCCACACCTCCCTGACATCCCGTCACCAGCACCGTAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR TCA 90 bp | CGGGGGTTTCAGAACTATACATGCCACAAGGCTTTACGGTGCTGGTaGCGGGATGTCAGGGAGGTGTGGCGAGTCCTGGGGTGGTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: RGFQNYTCHKALRCW*RDVREVWRVLGWWS Trigger: ACTCCACCACCCCAGGACTCGCCACACCTCCCTGACATCCCGTCACCAGCACCGTAAAGCCTTGTGGCATGTATAGTTCTGAAACCCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | ATACGTGTATCTGTGCACACCAGCTCATGTGCCACAGTCCTGGCCTaGGACAAGGACAGGTGTGGCACACACATTCCAGGGAGGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: IRVSVHTSSCATVLA*DKDRCGTHIPGRWG Trigger: CCCCCACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGATACACGTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | ATTCCTCTCCTGGGGCTGCCCTACACACCACTTCTGAGGCTTGAGTaGGTGTGTGGCGGGGTCTTGAGCCTGAGAGGCATACAGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: IPLLGLPYTPLLRLE*VCGGVLSLRGIQAS Trigger: TGAAGCCTGTATGCCTCTCAGGCTCAAGACCCCGCCACACACCCACTCAAGCCTCAGAAGTGGTGTGTAGGGCAGCCCCAGGAGAGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR GCA 90 bp | GCTCATGGAAGTCAAGAGGCTGAAACACGTGTGCCGGTGTATGAGTaGCCAAGGCAACAGAAGCAGGGACCTGGGGACATGGGGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: AHGSQEAETRVPVYE*PRQQKQGPGDMGTC Trigger: GCAAGTCCCCATGTCCCCAGGTCCCTGCTTCTGTTGCCTTGGGCACTCATACACCGGCACACGTGTTTCAGCCTCTTGACTTCCATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR GCA 90 bp | GGTCATGCACGACGACATACGTGTATCTGTGCACACCAGCTCATGTaGCACAGTCCTGGCCTGGGACAAGGACAGGTGTGGCACACACAT | + |
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Preference number: 1 (lower is better) Translates to: GHARRHTCICAHQLM*HSPGLGQGQVWHTH Trigger: ATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGATACACGTATGTCGTCGTGCATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | ACGACATACGTGTATCTGTGCACACCAGCTCATGTGCCACAGTCCTaGCCTGGGACAAGGACAGGTGTGGCACACACATTCCAGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TTYVYLCTPAHVPQS*PGTRTGVAHTFQGG Trigger: ACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGATACACGTATGTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | GGAGTATGGGGGACACAGGAGAGCCTGGAAATTCACCAGCATGCATaGGAGTACAGCTGGGATCGGGGTGACACGCTGGGATCTATACCA | + |
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Preference number: 1 (lower is better) Translates to: GVWGTQESLEIHQHA*EYSWDRGDTLGSIP Trigger: TGGTATAGATCCCAGCGTGTCACCCCGATCCCAGCTGTACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | TCCTGCCTCAGCCTCCTGAGCTTTGATTCTCCTTGGTGCAGGGGATaGAACGTGAGCTTCCTGCAGGCTAGGCAAGTCCTCTACCAAATG | + |
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Preference number: 1 (lower is better) Translates to: SCLSLLSFDSPWCRG*NVSFLQARQVLYQM Trigger: CATTTGGTAGAGGACTTGCCTAGCCTGCAGGAAGCTCACGTTCCATCCCCTGCACCAAGGAGAATCAAAGCTCAGGAGGCTGAGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR GCA 90 bp | CTCTGGTGCTTGGTGCAGGGCTACTTAGGAACTAGTCAGGGGTCATaGACGACGACATACGTGTATCTGTGCACACCAGCTCATGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LWCLVQGYLGTSQGS*TTTYVYLCTPAHVP Trigger: TGGCACATGAGCTGGTGTGCACAGATACACGTATGTCGTCGTGCATGACCCCTGACTAGTTCCTAAGTAGCCCTGCACCAAGCACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | CAATGTAGGGAGTTGATTCTAGAGCAAGAGAAACAGCCAGAGGGCTaGAGCACATGTGGGGTGCTCCATGTACGTGCTGCTAGGACAGGC | + |
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Preference number: 1 (lower is better) Translates to: QCRELILEQEKQPEG*STCGVLHVRAARTG Trigger: GCCTGTCCTAGCAGCACGTACATGGAGCACCCCACATGTGCTCCAGCCCTCTGGCTGTTTCTCTTGCTCTAGAATCAACTCCCTACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | ACACAGGAGAGCCTGGAAATTCACCAGCATGCATGGGAGTACAGCTaGGATCGGGGTGACACGCTGGGATCTATACCACTGAACACCATC | + |
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Preference number: 1 (lower is better) Translates to: TQESLEIHQHAWEYS*DRGDTLGSIPLNTI Trigger: GATGGTGTTCAGTGGTATAGATCCCAGCGTGTCACCCCGATCCCAGCTGTACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR TCA 90 bp | GTCCAACCTGGGGTTCTGTCTCAGTGTCCATGGTATGTGACATCCTaGGCTTCATCTGTATGGCCTGGTCCTGGCCATTCCTGCTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: VQPGVLSQCPWYVTS*ASSVWPGPGHSCFW Trigger: CCAAAAGCAGGAATGGCCAGGACCAGGCCATACAGATGAAGCTCAGGATGTCACATACCATGGACACTGAGACAGAACCCCAGGTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR TCA 90 bp | CAAGGGAAGTCCAACCTGGGGTTCTGTCTCAGTGTCCATGGTATGTaGCATCCTGAGCTTCATCTGTATGGCCTGGTCCTGGCCATTCCT | + |
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Preference number: 1 (lower is better) Translates to: QGKSNLGFCLSVHGM*HPELHLYGLVLAIP Trigger: AGGAATGGCCAGGACCAGGCCATACAGATGAAGCTCAGGATGTCACATACCATGGACACTGAGACAGAACCCCAGGTTGGACTTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | GAGGTTCTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCCTaGGTGCTGCTGCTTCAGCCAGTGTTGGGAAGGGAGAAGTCCGTT | + |
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Preference number: 1 (lower is better) Translates to: EVLIVYSLHLVQGRA*VLLLQPVLGREKSV Trigger: AACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAGAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 90 bp | CCCACTCATTCCATGTGTCCTAATGGCCCTCCAGGCCCAGAGCTTTaGAGGATGCCAATGGGAAATATCAGAAGAATCGGGGGCAAAATT | + |
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Preference number: 1 (lower is better) Translates to: PTHSMCPNGPPGPEL*RMPMGNIRRIGGKI Trigger: AATTTTGCCCCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAGCTCTGGGCCTGGAGGGCCATTAGGACACATGGAATGAGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR GCA 90 bp | ATTCCATGTGTCCTAATGGCCCTCCAGGCCCAGAGCTTTGGAGGATaGCAATGGGAAATATCAGAAGAATCGGGGGCAAAATTCGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: IPCVLMALQAQSFGG*QWEISEESGAKFEA Trigger: AGCTTCGAATTTTGCCCCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAGCTCTGGGCCTGGAGGGCCATTAGGACACATGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGGCAGCCGGTAGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCACGGGCTCAGTGACTTaGCACCAGGTGGCTGTCGTA | + |
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Preference number: 2 (lower is better) Translates to: AEAAGRMRGHVCPWLRVGTGSVT*HQVAVV Trigger: TACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGT...GCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGCTGCCTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CAA 90 bp | CCCTACACACCACTTCTGAGGCTTGAGTGGGTGTGTGGCGGGGTCTaGAGCCTGAGAGGCATACAGGCTTCATGGCGCCCCACCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PYTPLLRLEWVCGGV*SLRGIQASWRPTLL Trigger: GAGCAGGGTGGGGCGCCATGAAGCCTGTATGCCTCTCAGGCTCAAGACCCCGCCACACACCCACTCAAGCCTCAGAAGTGGTGTGTAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGGTCCTGGCCATTCCTGCTTTTGGACTCAGCCCTGGCACCTCCTACTAGCAGCCCACTCCACCTaGGAGCAGAAGGCGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: WPGPGHSCFWTQPWHLLLAAHST*EQKAPE Trigger: CTCAGGCGCCTTCTGCTCTCAGGTGGAGTGGGCTGC...TAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGGTCCTGGCCATTCCTGCTTTTGGACTCAGCCCTGGCACCTCCTACTAATGAGGGGGCACGTCTaGCCATGGCTGAGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: WPGPGHSCFWTQPWHLLLMRGHV*PWLRVG Trigger: GCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCAT...TAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTGCTGCTGCTTCAGCCAGTGTTGGGAAGGGAGAAGTCCGTTGGCATAGGATGAGGGGGCACGTCTaGCCATGGCTGAGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LGAAASASVGKGEVRWHRMRGHV*PWLRVG Trigger: GCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCAT...CCTATGCCAACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGCAGCACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CAA 90 bp | CATCTGGTTCAGGGAAGGGCCTGGGTGCTGCTGCTTCAGCCAGTGTaGGGAAGGGAGAAGTCCGTTGGCATAGGTTCCCCCAGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: HLVQGRAWVLLLQPV*GREKSVGIGSPSRG Trigger: GCCTCTGCTGGGGGAACCTATGCCAACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTACGTGCTGCTAGGACAGGCATTCCTCTCCTGGGGCTGCCCTACACACGCCTCTCTTGGGGTCTaGTCTGGTGCTTGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SMYVLLGQAFLSWGCPTHASLGV*SGAWCR Trigger: CCTGCACCAAGCACCAGAGCAGACCCCAAGAGAGGC...GTGTGTAGGGCAGCCCCAGGAGAGGAATGCCTGTCCTAGCAGCACGTACATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCTGGGACAAGGACAGGTGTGGCACACACATTCCAGGGAGGTGGGGGAAAAGCTGGCACTCGTTaGCCCAAGGGAAGTCCAACC | + |
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Preference number: 2 (lower is better) Translates to: SWPGTRTGVAHTFQGGGGKAGTR*PKGSPT Trigger: GGTTGGACTTCCCTTGGGCCAACGAGTGCCAGCTTT...TCCCCCACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTTCAGAACTATACATGCCACAAGGCTTTACGGTGCTGGTGACGGGATGAGGGACCTGGGGACATaGGGACTTGCACGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGFRTIHATRLYGAGDGMRDLGT*GLARAS Trigger: AGAGGCCCGTGCAAGTCCCCATGTCCCCAGGTCCCT...CATCCCGTCACCAGCACCGTAAAGCCTTGTGGCATGTATAGTTCTGAAACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | CTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCCTGGGTGCTGCTGCTTGGGCACGTCTGCCCATaGCTGAGGGTGGGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: LIVYSLHLVQGRAWVLLLGHVCP*LRVGIH Trigger: ATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCC...AAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CAA 90 bp | ATCCTGAGCTTCATCTGTATGGCCTGGTCCTGGCCATTCCTGCTTTaGGACTCAGCCCTGGCACCTCCTACTAGTCTTACCTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: ILSFICMAWSWPFLL*DSALAPPTSLTSQD Trigger: GTCCTGGGAGGTAAGACTAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCATACAGATGAAGCTCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGGTCCTGGCCATTCCTGCTTTTGGACTCAGCCCTGGCACCTCCTACTATTTATTCTCTGCATCTaGTTCAGGGAAGGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: WPGPGHSCFWTQPWHLLLFILCI*FREGPG Trigger: CCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAA...TAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAGGGAGGTGGGGGAAAGCACATCGAGGGAAGCCACCCACCAAGGTTTCCTGGTATGTGACATCCTaGGCTTCATCTGTATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: IPGRWGKAHRGKPPTKVSWYVTS*ASSVWP Trigger: AGGCCATACAGATGAAGCTCAGGATGTCACATACCA...GGAAACCTTGGTGGGTGGCTTCCCTCGATGTGCTTTCCCCCACCTCCCTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTGAGAGAGGTTCTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCTGCTTCAGCCAGTGTTaGGAAGGGAGAAGTCCGTTG | + |
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Preference number: 2 (lower is better) Translates to: APERGSHSLFSASGSGKGCFSQC*EGRSPL Trigger: CAACGGACTTCTCCCTTCCCAACACTGGCTGAAGCA...GCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAGAACCTCTCTCAGGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGTATGGGGGACACAGGAGAGCCTGGAAATTCACCAGCATGCATGGGAGTACCATCCACTCCAAATaGGAACAAGTAAGGTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VEYGGHRRAWKFTSMHGSTIHSK*EQVRLC Trigger: GCACAACCTTACTTGTTCTCATTTGGAGTGGATGGT...ACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR TCA 72 bp | CCAGGCGCAGGGGTCGGCGGACCCCAACGGGCTCAGTaGCTTGGCACCAGGTGGCTGTCGTATGGCGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PGAGVGGPQRAQ*LGTRWLSYGGP Trigger: AGGACCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTGCGCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CCA 72 bp | GAGGCAGCCGGTAGGATGAGGGGGCACGTCTGCCCATaGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: EAAGRMRGHVCP*LRVGIHPRRRG Trigger: ACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGCTGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CCA 72 bp | CGCAGGGGTCGGCGGACCCCAACGGGCTCAGTGACTTaGCACCAGGTGGCTGTCGTATGGCGGTCCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: RRGRRTPTGSVT*HQVAVVWRSWD Trigger: ATCCCAGGACCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGAACGGGCTCAGTGACTaGGCACCAGGTGGCTGTCGT | + |
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Preference number: 3 (lower is better) Translates to: MRGHVCPWLRVGIHPRRRNGLSD*APGGCR Trigger: ACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTT...CCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR-3UTR CAA 90 bp | GCCGGTAGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAACGGGCTCAGTGACTaGGCACCAGGTGGCTGTCGT | + |
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Preference number: 3 (lower is better) Translates to: AGRMRGHVCPWLRVGIHPNGLSD*APGGCR Trigger: ACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTT...GGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CCA 72 bp | GCTGGTGACGGGATGTCAGGGAGGTGTGGCGAGTCCTaGGGTGGTGGAGTATGGGGGACACAGGAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: AGDGMSGRCGES*GGGVWGTQESL Trigger: CAGGCTCTCCTGTGTCCCCCATACTCCACCACCCCAGGACTCGCCACACCTCCCTGACATCCCGTCACCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR TCA 72 bp | TCTCCTGGGGCTGCCCTACACACCACTTCTGAGGCTTaGGTGGGTGTGTGGCGGGGTCTTGAGCCTGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SPGAALHTTSEA*VGVWRGLEPER Trigger: CCTCTCAGGCTCAAGACCCCGCCACACACCCACTCAAGCCTCAGAAGTGGTGTGTAGGGCAGCCCCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 72 bp | GGACCTGGGGACATGGGGACTTGCACGGGCCTCTCTTaGGGTCTGCTCTGGTGCTTGGTGCAGGGCTACTTA | + |
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Preference number: 3 (lower is better) Translates to: GPGDMGTCTGLS*GLLWCLVQGYL Trigger: TAAGTAGCCCTGCACCAAGCACCAGAGCAGACCCCAAGAGAGGCCCGTGCAAGTCCCCATGTCCCCAGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 72 bp | GCTGCTTCAGCCAGTGTTGGGAAGGGAGAAGTCCGTTaGCATAGGTTCCCCCAGCAGAGGCAGCCGGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: AASASVGKGEVR*HRFPQQRQPVG Trigger: TCCTACCGGCTGCCTCTGCTGGGGGAACCTATGCCAACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CCA 72 bp | CTGGGGCTGCCCTACACACCACTTCTGAGGCTTGAGTaGGTGTGTGGCGGGGTCTTGAGCCTGAGAGGCATA | + |
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Preference number: 3 (lower is better) Translates to: LGLPYTPLLRLE*VCGGVLSLRGI Trigger: TATGCCTCTCAGGCTCAAGACCCCGCCACACACCCACTCAAGCCTCAGAAGTGGTGTGTAGGGCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CCA 72 bp | CGGGATGTCAGGGAGGTGTGGCGAGTCCTGGGGTGGTaGAGTATGGGGGACACAGGAGAGCCTGGAAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RDVREVWRVLGW*SMGDTGEPGNS Trigger: TGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCACCACCCCAGGACTCGCCACACCTCCCTGACATCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | GACAAGGACAGGTGTGGCACACACATTCCAGGGAGGTaGGGGAAAGCACATCGAGGGAAGCCACCCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DKDRCGTHIPGR*GKAHRGKPPTK Trigger: CTTGGTGGGTGGCTTCCCTCGATGTGCTTTCCCCCACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | ATGTGCCACAGTCCTGGCCTGGGACAAGGACAGGTGTaGCACACACATTCCAGGGAGGTGGGGGAAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: MCHSPGLGQGQV*HTHSREVGEST Trigger: TGTGCTTTCCCCCACCTCCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | TCTGTGCACACCAGCTCATGTGCCACAGTCCTGGCCTaGGACAAGGACAGGTGTGGCACACACATTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SVHTSSCATVLA*DKDRCGTHIPG Trigger: CCCTGGAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | GGGACACAGGAGAGCCTGGAAATTCACCAGCATGCATaGGAGTACAGCTGGGATCGGGGTGACACGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTQESLEIHQHA*EYSWDRGDTLG Trigger: TCCCAGCGTGTCACCCCGATCCCAGCTGTACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | CCTGGGGTGGTGGAGTATGGGGGACACAGGAGAGCCTaGAAATTCACCAGCATGCATGGGAGTACAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGVVEYGGHRRA*KFTSMHGSTAG Trigger: CCCAGCTGTACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCACCACCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR TCA 72 bp | CAGAACTATACATGCCACAAGGCTTTACGGTGCTGGTaGCGGGATGTCAGGGAGGTGTGGCGAGTCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QNYTCHKALRCW*RDVREVWRVLG Trigger: CCCCAGGACTCGCCACACCTCCCTGACATCCCGTCACCAGCACCGTAAAGCCTTGTGGCATGTATAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR GCA 72 bp | ATTCTCTGCATCTGGTTCAGGGAAGGGCCTGGGTGCTaGTGCTTCAGCCAGTGTTGGGAAGGGAGAAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: ILCIWFREGPGC*CFSQCWEGRSP Trigger: CGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| 3UTR GCA 72 bp | AGTCAGGGGTCATGCACGACGACATACGTGTATCTGTaGACACCAGCTCATGTGCCACAGTCCTGGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGSCTTTYVYL*TPAHVPQSWPG Trigger: CCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGATACACGTATGTCGTCGTGCATGACCCCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | ATGGGGACTTGCACGGGCCTCTCTTGGGGTCTGCTCTaGTGCTTGGTGCAGGGCTACTTAGGAACTAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MGTCTGLSWGLL*CLVQGYLGTSQ Trigger: CTGACTAGTTCCTAAGTAGCCCTGCACCAAGCACCAGAGCAGACCCCAAGAGAGGCCCGTGCAAGTCCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | TCCTCCTGCCTCAGCCTCCTGAGCTTTGATTCTCCTTaGTGCAGGGGATGGAACGTGAGCTTCCTGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCLSLLSFDSP*CRGWNVSFLQA Trigger: AGCCTGCAGGAAGCTCACGTTCCATCCCCTGCACCAAGGAGAATCAAAGCTCAGGAGGCTGAGGCAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR GCA 72 bp | AGTCAAGAGGCTGAAACACGTGTGCCGGTGTATGAGTaGCCAAGGCAACAGAAGCAGGGACCTGGGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: SQEAETRVPVYE*PRQQKQGPGDM Trigger: CATGTCCCCAGGTCCCTGCTTCTGTTGCCTTGGGCACTCATACACCGGCACACGTGTTTCAGCCTCTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | AGAGCACCGGCAGCTGACATTAAAGCTGGCACTCGTTaGCCCAAGGGAAGTCCAACCTGGGGTTCTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RAPAADIKAGTR*PKGSPTWGSVS Trigger: TGAGACAGAACCCCAGGTTGGACTTCCCTTGGGCCAACGAGTGCCAGCTTTAATGTCAGCTGCCGGTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | GTGTATCTGTGCACACCAGCTCATGTGCCACAGTCCTaGCCTGGGACAAGGACAGGTGTGGCACACACATTC | + |
|
Preference number: 3 (lower is better) Translates to: VYLCTPAHVPQS*PGTRTGVAHTF Trigger: GAATGTGTGTGCCACACCTGTCCTTGTCCCAGGCCAGGACTGTGGCACATGAGCTGGTGTGCACAGATACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGTATGGGGGACACAGGAGAGCCTGGAAATTCACCAGCATGCATGGGAGTCTGCTTCAGCCAGTGTaGGGAAGGGAGAAGTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: VEYGGHRRAWKFTSMHGSLLQPV*GREKSV Trigger: AACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAG...ACTCCCATGCATGCTGGTGAATTTCCAGGCTCTCCTGTGTCCCCCATACTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | TGTGACATCCTGAGCTTCATCTGTATGGCCTGGTCCTaGCCATTCCTGCTTTTGGACTCAGCCCTGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CDILSFICMAWS*PFLLLDSALAP Trigger: AGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCATACAGATGAAGCTCAGGATGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | AGCCTGGAAATTCACCAGCATGCATGGGAGTACAGCTaGGATCGGGGTGACACGCTGGGATCTATACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLEIHQHAWEYS*DRGDTLGSIPL Trigger: CAGTGGTATAGATCCCAGCGTGTCACCCCGATCCCAGCTGTACTCCCATGCATGCTGGTGAATTTCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | ATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCCTaGGTGCTGCTGCTTCAGCCAGTGTTGGGAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IVYSLHLVQGRA*VLLLQPVLGRE Trigger: CTCCCTTCCCAACACTGGCTGAAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| 3UTR CCA 72 bp | GAGTTGATTCTAGAGCAAGAGAAACAGCCAGAGGGCTaGAGCACATGTGGGGTGCTCCATGTACGTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELILEQEKQPEG*STCGVLHVRAA Trigger: AGCAGCACGTACATGGAGCACCCCACATGTGCTCCAGCCCTCTGGCTGTTTCTCTTGCTCTAGAATCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR TCA 72 bp | TCCAACCTGGGGTTCTGTCTCAGTGTCCATGGTATGTaGCATCCTGAGCTTCATCTGTATGGCCTGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SNLGFCLSVHGM*HPELHLYGLVL Trigger: CAGGACCAGGCCATACAGATGAAGCTCAGGATGTCACATACCATGGACACTGAGACAGAACCCCAGGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR GCA 72 bp | TTGGTGCAGGGCTACTTAGGAACTAGTCAGGGGTCATaGACGACGACATACGTGTATCTGTGCACACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVQGYLGTSQGS*TTTYVYLCTPA Trigger: AGCTGGTGTGCACAGATACACGTATGTCGTCGTGCATGACCCCTGACTAGTTCCTAAGTAGCCCTGCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR GCA 72 bp | GTCCTAATGGCCCTCCAGGCCCAGAGCTTTGGAGGATaGCAATGGGAAATATCAGAAGAATCGGGGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLMALQAQSFGG*QWEISEESGAK Trigger: TTTTGCCCCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAGCTCTGGGCCTGGAGGGCCATTAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | ATGGTATGTGACATCCTGAGCTTCATCTGTATGGCCTaGTCCTGGCCATTCCTGCTTTTGGACTCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVCDILSFICMA*SWPFLLLDSAL Trigger: CAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCATACAGATGAAGCTCAGGATGTCACATACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| 3UTR CCA 72 bp | ATGGCCCTCCAGGCCCAGAGCTTTGGAGGATGCCAATaGGAAATATCAGAAGAATCGGGGGCAAAATTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: MALQAQSFGGCQ*EISEESGAKFE Trigger: TTCGAATTTTGCCCCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAGCTCTGGGCCTGGAGGGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAACGGGCTCGCCGGCACAGGTCCATaGGTGGCAGGGGCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AEGGHPSQAQGSADPNGLAGTGP*VAGAQD Trigger: ATCCTGAGCCCCTGCCACTCATGGACCTGTGCCGGC...GAGCCCGTTGGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAACGGGCACCCAACTTTGCCCCTaGTGGCGTCCGTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLRVGIHPRRRGRRTPTGTQLCP*WRPCSG Trigger: CCCAGAGCACGGACGCCATCAGGGGCAAAGTTGGGT...GCCCGTTGGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCACCCCCACCACGGCATaGGTGCCTCGTTGCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPMAEGGHPSQAQGSADPTPTTA*VPRCLM Trigger: CATGAGGCAACGAGGCACGCATGCCGTGGTGGGGGT...GGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGCAGGTCCAGCCGGGTaGGCTTGCAGTAATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLPMAEGGHPSQAQGSAAGPAG*ACSNPA Trigger: GGCTGGATTACTGCAAGCCCACCCGGCTGGACCTGC...CGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| 3UTR CAA 72 bp | GCGCAGGGGTCGGCGGACCCCAACGGGCTCAGTGACTaGGCACCAGGTGGCTGTCGTATGGCGGTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQGSADPNGLSD*APGGCRMAVLG Trigger: TCCCAGGACCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCAGAGGAGGTAGGCTTTaGGGGAGGCAGGTAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLRVGIHPRRRGRRTRGGRL*GRQVAA Trigger: TGCCGCTACCTGCCTCCCTCAAAGCCTACCTCCTCT...GGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAACGGGCTCATGCGGATCTCACAGTaGCCCCAGACGGCACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AEGGHPSQAQGSADPNGLMRISQ*PQTALT Trigger: AGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGCAT...GAGCCCGTTGGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GGTCGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTATGGGCGGCAGAGCGGGGATaGCACCCAGGCGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRTPTGSVTWHQVAVVWAAERG*HPGAPF Trigger: GAAAGGAGCGCCTGGGTGCCATCCCCGCTCTGCCGC...CCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | GCCGGTAGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCACCCAACTTTGCCCCTaGTGGCGTCCGTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRMRGHVCPWLRVGIHPTQLCP*WRPCSG Trigger: CCCAGAGCACGGACGCCATCAGGGGCAAAGTTGGGT...GGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAGGAGTCAGGGACAATaGATGTCTCGTCCGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPMAEGGHPSQAQGSADPRSQGQ*MSRPAP Trigger: TGGAGCCGGACGAGACATTCATTGTCCCTGACTCCT...GGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGTGCAAAGGGGCATCTaGTGTGGCCACCCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRGHVCPWLRVGIHPRRRVQRGI*CGHPHH Trigger: GTGGTGGGGGTGGCCACAGCAGATGCCCCTTTGCAC...CCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGTCAGAGGTCGGTATGTaGGGTCCCGCATGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLPMAEGGHPSQAQGSASEVGM*GPACPQ Trigger: CTGTGGACATGCGGGACCCCACATACCGACCTCTGA...CGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCGCCACCGGATGCCGGTaGAAGATCAACTTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMAEGGHPSQAQGSADPATGCR*KINLSS Trigger: AGATGACAAGTTGATCTTTCACCGGCATCCGGTGGC...GGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GGTCGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTATGGAAGGGGCATCTGCTGTaGCCACCCCCACCACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRTPTGSVTWHQVAVVWKGHLL*PPPPRH Trigger: ATGCCGTGGTGGGGGTGGCCACAGCAGATGCCCCTT...CCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR GCA 90 bp | CGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTATGGCGGGCATGCGTGCCTCGTTaGCTCATGGCCCATGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RRTPTGSVTWHQVAVVWRACVPR*LMAHVI Trigger: GATCACATGGGCCATGAGGCAACGAGGCACGCATGC...CCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGCATGCGTGCCTCGTTaGCTCATGGCCCATGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: MRGHVCPWLRVGIHPRRRACVPR*LMAHVI Trigger: GATCACATGGGCCATGAGGCAACGAGGCACGCATGC...CCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTCGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTGCACAGGTCCATGAGTaGCAGGGGCTCAGGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSADPNGLSDLAPGGCRAQVHE*QGLRIK Trigger: CTTGATCCTGAGCCCCTGCCACTCATGGACCTGTGC...ACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTACGTGCTGCTAGGACAGGCATTCCTCTCCTGGGGCTGCCCTACACACGCGGCAGAGCGGGGATaGCACCCAGGCGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMYVLLGQAFLSWGCPTHAAERG*HPGAPF Trigger: GAAAGGAGCGCCTGGGTGCCATCCCCGCTCTGCCGC...GTGTGTAGGGCAGCCCCAGGAGAGGAATGCCTGTCCTAGCAGCACGTACATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGTCGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTAAGGAGTCAGGGACAATaGATGTCTCGTCCGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGRRTPTGSVTWHQVAVVRSQGQ*MSRPAP Trigger: TGGAGCCGGACGAGACATTCATTGTCCCTGACTCCT...TACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTATGGCGGTCCTGGGCCTCATGGCCCATGTaGTCTGCCATACATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTGSVTWHQVAVVWRSWASWPM*SAIHAV Trigger: GACTGCATGTATGGCAGATCACATGGGCCATGAGGC...CCAGGACCGCCATACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCTTCAGCCAGTGTTGGGAAGGGAGAAGTCCGTTGGCATAGGTTCCCCGCAGGTCCAGCCGGGTaGGCTTGCAGTAATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAASASVGKGEVRWHRFPAGPAG*ACSNPA Trigger: GGCTGGATTACTGCAAGCCCACCCGGCTGGACCTGC...GGGGAACCTATGCCAACGGACTTCTCCCTTCCCAACACTGGCTGAAGCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | GCCGGTAGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCCAGCCCCAGGATTCATaGTTATTTCCTACAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGRMRGHVCPWLRVGIHPQPQDS*LFPTRV Trigger: AACCCTTGTAGGAAATAACCATGAATCCTGGGGCTG...GGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTCGGCGGACCCCAACGGGCTCAGTGACTTGGCACCAGGTGGCTGTCGTCAGCCCCAGGATTCATaGTTATTTCCTACAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSADPNGLSDLAPGGCRQPQDS*LFPTRV Trigger: AACCCTTGTAGGAAATAACCATGAATCCTGGGGCTG...ACGACAGCCACCTGGTGCCAAGTCACTGAGCCCGTTGGGGTCCGCCGACCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGGTCCTGGCCATTCCTGCTTTTGGACTCAGCCCTGGCACCTCCTACTAATGCGGATCTCACAGTaGCCCCAGACGGCACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: WPGPGHSCFWTQPWHLLLMRISQ*PQTALT Trigger: AGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGCAT...TAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR TCA 90 bp | GCGCCTGAGAGAGGTTCTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCGCCGGCACAGGTCCATaGGTGGCAGGGGCTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: APERGSHSLFSASGSGKGAGTGP*VAGAQD Trigger: ATCCTGAGCCCCTGCCACTCATGGACCTGTGCCGGC...GCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAGAACCTCTCTCAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR CCA 90 bp | CCACTCATTCCATGTGTCCTAATGGCCCTCCAGGCCCAGAGCTTTGGAGGATGCTCAGAGGTCGGTATGTaGGGTCCCGCATGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PLIPCVLMALQAQSFGGCSEVGM*GPACPQ Trigger: CTGTGGACATGCGGGACCCCACATACCGACCTCTGA...GCATCCTCCAAAGCTCTGGGCCTGGAGGGCCATTAGGACACATGGAATGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| 3UTR CAA 72 bp | ACTTGCACGGGCCTCTCTTGGGGTCTGCTCTGGTGCTaGGTGCAGGGCTACTTAGGAACTAGTCAGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TCTGLSWGLLWC*VQGYLGTSQGS Trigger: TGACCCCTGACTAGTTCCTAAGTAGCCCTGCACCAAGCACCAGAGCAGACCCCAAGAGAGGCCCGTGCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR TCA 90 bp | CCTCCAGGCCCAGAGCTTTGGAGGATGCCAATGGGAAATATCAGAAGAATCGGGAGAGGAGGTAGGCTTTaGGGGAGGCAGGTAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPGPELWRMPMGNIRRIGRGGRL*GRQVAA Trigger: TGCCGCTACCTGCCTCCCTCAAAGCCTACCTCCTCT...CCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAGCTCTGGGCCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR GCA 90 bp | CTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCCTGGGTGCTGCTGCTTACCCCCACCACGGCATaGGTGCCTCGTTGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: LIVYSLHLVQGRAWVLLLTPTTA*VPRCLM Trigger: CATGAGGCAACGAGGCACGCATGCCGTGGTGGGGGT...AAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS-3UTR CCA 90 bp | CTCATAGTTTATTCTCTGCATCTGGTTCAGGGAAGGGCCTGGGTGCTGCTGCTTGCACAGGTCCATGAGTaGCAGGGGCTCAGGATCAAG | + |
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Preference number: 4 (lower is better) Translates to: LIVYSLHLVQGRAWVLLLAQVHE*QGLRIK Trigger: CTTGATCCTGAGCCCCTGCCACTCATGGACCTGTGC...AAGCAGCAGCACCCAGGCCCTTCCCTGAACCAGATGCAGAGAATAAACTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| 3UTR CAA 72 bp | TTCATCTGTATGGCCTGGTCCTGGCCATTCCTGCTTTaGGACTCAGCCCTGGCACCTCCTACTAGTCTTACC | + |
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Preference number: 4 (lower is better) Translates to: FICMAWSWPFLL*DSALAPPTSLT Trigger: GGTAAGACTAGTAGGAGGTGCCAGGGCTGAGTCCAAAAGCAGGAATGGCCAGGACCAGGCCATACAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR TCA 90 bp | CTTTGGAGGATGCCAATGGGAAATATCAGAAGAATCGGGGGCAAAATTCGAAGCGCCACCGGATGCCGGTaGAAGATCAACTTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LWRMPMGNIRRIGGKIRSATGCR*KINLSS Trigger: AGATGACAAGTTGATCTTTCACCGGCATCCGGTGGC...GCTTCGAATTTTGCCCCCGATTCTTCTGATATTTCCCATTGGCATCCTCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038562.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCCGCATGTCCACAGTCTaGATCCCTCCTGTGACCTTC | + |
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Preference number: 5 (lower is better) Translates to: LPMAEGGHPSQAQGSADPRMSTV*IPPVTF Trigger: GAAGGTCACAGGAGGGATCAAGACTGTGGACATGCG...GGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS-3UTR CAA 90 bp | CCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGGGGTCGGCGGACCCCAACGAGCGAACGGTCGTTATaGTTCCAGGAGTGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PWLRVGIHPRRRGRRTPTSERSL*FQEWSS Trigger: GCTGCTCCACTCCTGGAACAATAACGACCGTTCGCT...CGTTGGGGTCCGCCGACCCCTGCGCCTGGGATGGATGCCCACCCTCAGCCATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS-3UTR CAA 90 bp | GCCGGTAGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCCGCATGTCCACAGTCTaGATCCCTCCTGTGACCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGRMRGHVCPWLRVGIHPRMSTV*IPPVTF Trigger: GAAGGTCACAGGAGGGATCAAGACTGTGGACATGCG...GGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCTACCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS-3UTR CAA 90 bp | AGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCAGCGAACGGTCGTTATaGTTCCAGGAGTGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RMRGHVCPWLRVGIHPRRSERSL*FQEWSS Trigger: GCTGCTCCACTCCTGGAACAATAACGACCGTTCGCT...GCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS CCA 90 bp | CATCGTAGGACACAGGGGGCATGTCGAGCAGCAGGTCCAGCCGGGTaGGCTTGCAGTAATCCAGCCCCTGGAGTTCCTGCTTCAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: HRRTQGACRAAGPAG*ACSNPAPGVPASEV Trigger: GACCTCTGAAGCAGGAACTCCAGGGGCTGGATTACTGCAAGCCCACCCGGCTGGACCTGCTGCTCGACATGCCCCCTGTGTCCTACGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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| CDS TCA 90 bp | CCACCCCCACCACGGCATGCGTGCCTCGTTGCCTCATGGCCCATGTaGTCTGCCATACATGCAGTCCACGTGTGTACCCAACTTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PPPPRHACLVASWPM*SAIHAVHVCTQLCP Trigger: GGGGCAAAGTTGGGTACACACGTGGACTGCATGTATGGCAGATCACATGGGCCATGAGGCAACGAGGCACGCATGCCGTGGTGGGGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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| CDS-3UTR CAA 90 bp | AGGATGAGGGGGCACGTCTGCCCATGGCTGAGGGTGGGCATCCATCCCAGGCGCCTGGGTATGTTTTACTaGGCTGGTTCTTGCCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: RMRGHVCPWLRVGIHPRRLGMFY*AGSCRR Trigger: ACGACGGCAAGAACCAGCCAAGTAAAACATACCCAG...GCGCCTGGGATGGATGCCCACCCTCAGCCATGGGCAGACGTGCCCCCTCATCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038562.9 ENSMUST00000105685.2 |
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| CDS CCA 72 bp | ACACAGGGGGCATGTCGAGCAGCAGGTCCAGCCGGGTaGGCTTGCAGTAATCCAGCCCCTGGAGTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TQGACRAAGPAG*ACSNPAPGVPA Trigger: AGCAGGAACTCCAGGGGCTGGATTACTGCAAGCCCACCCGGCTGGACCTGCTGCTCGACATGCCCCCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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| CDS TCA 72 bp | CCACGGCATGCGTGCCTCGTTGCCTCATGGCCCATGTaGTCTGCCATACATGCAGTCCACGTGTGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: PRHACLVASWPM*SAIHAVHVCTQ Trigger: TTGGGTACACACGTGGACTGCATGTATGGCAGATCACATGGGCCATGAGGCAACGAGGCACGCATGCCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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| CDS GCA 72 bp | GCATGCGTGCCTCGTTGCCTCATGGCCCATGTGATCTaGCATACATGCAGTCCACGTGTGTACCCAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: ACVPRCLMAHVI*HTCSPRVYPTL Trigger: CAAAGTTGGGTACACACGTGGACTGCATGTATGGCAGATCACATGGGCCATGAGGCAACGAGGCACGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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| CDS CAA 72 bp | CCCAGCCCCAGGATTCATGGTTATTTCCTACAAGGGTaGTGTACCCAACGGAGTGCAAAGGGGCATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSPRIHGYFLQG*CTQRSAKGHLL Trigger: CAGCAGATGCCCCTTTGCACTCCGTTGGGTACACAACCCTTGTAGGAAATAACCATGAATCCTGGGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038562.9 ENSMUST00000105684.2 ENSMUST00000105685.2 ENSMUST00000156897.2 |
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