Pregenerated sensors for SPRYD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021930Ensembl transcript IDs: ENSMUST00000022497.15, ENSMUST00000100496.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAAACAGTCCTCTCCAGGGAAGAGGACACCATTACAAAATGGTaGGCCCTGTGCACACGCACAGACGAGCTAACATTATGCAGACTG | + |
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Preference number: 1 (lower is better) Translates to: RETVLSREEDTITKW*ALCTRTDELTLCRL Trigger: CAGTCTGCATAATGTTAGCTCGTCTGTGCGTGTGCACAGGGCTCACCATTTTGTAATGGTGTCCTCTTCCCTGGAGAGGACTGTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CCA 90 bp | ACAGAGACCATGACACAAACTCGTAACAATCGAAATGCAGAGTTGTaGAACACAGTCCCAAGGGATACATCTACAAGACAACTCCCACGC | + |
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Preference number: 1 (lower is better) Translates to: TETMTQTRNNRNAEL*NTVPRDTSTRQLPR Trigger: GCGTGGGAGTTGTCTTGTAGATGTATCCCTTGGGACTGTGTTCCACAACTCTGCATTTCGATTGTTACGAGTTTGTGTCATGGTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 90 bp | GAACAAGGACAACAACAGGCCAAAGTGGACAAGGGAAAGACCAAGTaGCCTCAAACCTACACAAAGAATGACAGACAACTAAGGAATGCA | + |
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Preference number: 1 (lower is better) Translates to: EQGQQQAKVDKGKTK*PQTYTKNDRQLRNA Trigger: TGCATTCCTTAGTTGTCTGTCATTCTTTGTGTAGGTTTGAGGTCACTTGGTCTTTCCCTTGTCCACTTTGGCCTGTTGTTGTCCTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 90 bp | CCTCAAACCTACACAAAGAATGACAGACAACTAAGGAATGCAGAGTaGGAGAAACAGTCCTCTCCAGGGAAGAGGACACCATTACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: PQTYTKNDRQLRNAE*EKQSSPGKRTPLQN Trigger: ATTTTGTAATGGTGTCCTCTTCCCTGGAGAGGACTGTTTCTCTCACTCTGCATTCCTTAGTTGTCTGTCATTCTTTGTGTAGGTTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR TCA 90 bp | ACAAGACAACTCCCACGCCTAGGGGTCAGGGAACACTGTAGAAAAGGGAGTAGACTAAGGAATGCAGAGTaGGAGAAACAGTCCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TRQLPRLGVREHCRKGSRLRNAE*EKQSSP Trigger: TGGAGAGGACTGTTTCTCTCACTCTGCATTCCTTAG...TCTACTCCCTTTTCTACAGTGTTCCCTGACCCCTAGGCGTGGGAGTTGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CAA 90 bp | CCATCAACTAGTCACAGGCTCTCAGCATGTCAGTATGATTACCCTTaGTGTAAGGTAGACTCTGAGAAACTCAGCAGCAGAGGACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSTSHRLSACQYDYP*CKVDSEKLSSRGQK Trigger: CTTCTGTCCTCTGCTGCTGAGTTTCTCAGAGTCTACCTTACACAAAGGGTAATCATACTGACATGCTGAGAGCCTGTGACTAGTTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CAA 90 bp | ACAACAGAGACCATGACACAAACTCGTAACAATCGAAATGCAGAGTaGTGGAACACAGTCCCAAGGGATACATCTACAAGACAACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TTETMTQTRNNRNAE*WNTVPRDTSTRQLP Trigger: TGGGAGTTGTCTTGTAGATGTATCCCTTGGGACTGTGTTCCACAACTCTGCATTTCGATTGTTACGAGTTTGTGTCATGGTCTCTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR TCA 90 bp | CAGACTGCTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAACCATATAGTGGCTTGGTCTAAGACACCATaGAAATCACTGCTTCACAAT | + |
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Preference number: 2 (lower is better) Translates to: QTALLKVQSSIPSNHIVAWSKTP*KSLLHN Trigger: ATTGTGAAGCAGTGATTTTCATGGTGTCTTAGACCA...AGCCACTATATGGTTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGCTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAACCATATAGTGGCTGAGACACAAAATTATTaGATTACAGACTATGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: QTALLKVQSSIPSNHIVAETQNY*ITDYGD Trigger: GTCACCATAGTCTGTAATCCAATAATTTTGTGTCTC...AGCCACTATATGGTTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR TCA 90 bp | TCTGATAACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATGATTACAGACTATGGTaGCTCAAGTTCAGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: SDNFLVFQKGNRKQGYNNDYRLW*LKFRMT Trigger: TGTCATCCTGAACTTGAGTCACCATAGTCTGTAATC...ATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGTTATCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATATAGACGGTATAATGAATACATaGGTTCCTTGGACAACAATT | + |
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Preference number: 2 (lower is better) Translates to: FSLHSPGCLGTYNTHYIDGIMNT*VPWTTI Trigger: AATTGTTGTCCAAGGAACCCATGTATTCATTATACC...GTCTATATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAACAGAAAGCAGGGATACAACAATACAGCAAAAGAAGCAGTTTCAGTTTAATACATGGGTTCCTTaGACAACAATTAGAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: KATESRDTTIQQKKQFQFNTWVP*TTIRSS Trigger: TGAGCTTCTAATTGTTGTCCAAGGAACCCATGTATT...AAACTGAAACTGCTTCTTTTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAAGGACAGGGAGACACAAAATTATTGGATTACAGACTATGGTGACTCAAAATACATGGGTTCCTTaGACAACAATTAGAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SKRTGRHKIIGLQTMVTQNTWVP*TTIRSS Trigger: TGAGCTTCTAATTGTTGTCCAAGGAACCCATGTATT...TTGAGTCACCATAGTCTGTAATCCAATAATTTTGTGTCTCCCTGTCCTTTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGATAACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATGGTATAATGAATACATaGGTTCCTTGGACAACAATT | + |
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Preference number: 2 (lower is better) Translates to: SDNFLVFQKGNRKQGYNNGIMNT*VPWTTI Trigger: AATTGTTGTCCAAGGAACCCATGTATTCATTATACC...ATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGTTATCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGAGCCCTGTGCACACGCACAGACGAGCTAACATTATGCAGACTGAGCAGAAGCACTTGCTACTCTaGCAGAGGTCAGGACCCACA | + |
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Preference number: 3 (lower is better) Translates to: MVSPVHTHRRANIMQTEQKHLLL*QRSGPT Trigger: TGTGGGTCCTGACCTCTGCAAGAGTAGCAAGTGCTT...CTGCTCAGTCTGCATAATGTTAGCTCGTCTGTGCGTGTGCACAGGGCTCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR GCA 72 bp | CAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTaGCCTCTTCTGGTGTGTCTGAAGACAGCTACCGTG | + |
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Preference number: 3 (lower is better) Translates to: QPSVMGSDALFW*PLLVCLKTATV Trigger: CACGGTAGCTGTCTTCAGACACACCAGAAGAGGGCACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | GTCCTCTCCAGGGAAGAGGACACCATTACAAAATGGTaGGCCCTGTGCACACGCACAGACGAGCTAACATTA | + |
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Preference number: 3 (lower is better) Translates to: VLSREEDTITKW*ALCTRTDELTL Trigger: TAATGTTAGCTCGTCTGTGCGTGTGCACAGGGCTCACCATTTTGTAATGGTGTCCTCTTCCCTGGAGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CCA 72 bp | TCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: SQPSVMGSDALF*CPLLVCLKTAT Trigger: GGTAGCTGTCTTCAGACACACCAGAAGAGGGCACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCTGCAGTTAAGAGCACAGACTaGTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSAVKSTD*SSEGPKFNSQQ Trigger: TTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTGTGCTCTTAACTGCAGAGCCATCTCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR CAA 90 bp | GCAGTTAAGAGCACAGACTGCTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAAAACAAGAGTTTGGGATaGGTCAGATGGCTCAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: AVKSTDCSSEGPKFNSQQNKSLG*VRWLSH Trigger: ATGGCTGAGCCATCTGACCAATCCCAAACTCTTGTT...TTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTGTGCTCTTAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | CAGCAGAGGACAGAAGGAAACTGGGCAACTGTTCTCTaGATTCTAGCGTCCATATTTTCCTTGCCTCACAAC | + |
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Preference number: 3 (lower is better) Translates to: QQRTEGNWATVL*ILASIFSLPHN Trigger: GTTGTGAGGCAAGGAAAATATGGACGCTAGAATTCAGAGAACAGTTGCCCAGTTTCCTTCTGTCCTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | CTAGACAGCTCACAACTGCATGTAACTCCAGCTTGGTaGTCTGATGCACTCTTTAGACTTTGGGTACCTACA | + |
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Preference number: 3 (lower is better) Translates to: LDSSQLHVTPAW*SDALFRLWVPT Trigger: TGTAGGTACCCAAAGTCTAAAGAGTGCATCAGATCACCAAGCTGGAGTTACATGCAGTTGTGAGCTGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | CTGATGCCCTCTTCTGGTGCCCTCTTCTGGTGTGTCTaGAGACAGCTACCGTGTACTCATGTAAATAAAATA | + |
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Preference number: 3 (lower is better) Translates to: LMPSSGALFWCV*RQLPCTHVNKI Trigger: TATTTTATTTACATGAGTACACGGTAGCTGTCTTCAGACACACCAGAAGAGGGCACCAGAAGAGGGCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR-3UTR CAA 90 bp | CAGACTGCTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAACCATATAGTGGCTGCGTCCATATTTTCCTaGCCTCACAACATCATACAA | + |
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Preference number: 3 (lower is better) Translates to: QTALLKVQSSIPSNHIVAASIFS*PHNIIQ Trigger: TTGTATGATGTTGTGAGGCAAGGAAAATATGGACGC...AGCCACTATATGGTTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | CAACAACAGGCCAAAGTGGACAAGGGAAAGACCAAGTaGCCTCAAACCTACACAAAGAATGACAGACAACTA | + |
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Preference number: 3 (lower is better) Translates to: QQQAKVDKGKTK*PQTYTKNDRQL Trigger: TAGTTGTCTGTCATTCTTTGTGTAGGTTTGAGGTCACTTGGTCTTTCCCTTGTCCACTTTGGCCTGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR TCA 72 bp | AATGTCAGAATCTATACCCTGAAAGTCTCATTAACATaGCTAAGGGGCTGGAGAGATGGCTCTGCAGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: NVRIYTLKVSLT*LRGWRDGSAVK Trigger: CTTAACTGCAGAGCCATCTCTCCAGCCCCTTAGTCATGTTAATGAGACTTTCAGGGTATAGATTCTGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CCA 72 bp | ATGACACAAACTCGTAACAATCGAAATGCAGAGTTGTaGAACACAGTCCCAAGGGATACATCTACAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: MTQTRNNRNAEL*NTVPRDTSTRQ Trigger: TTGTCTTGTAGATGTATCCCTTGGGACTGTGTTCCACAACTCTGCATTTCGATTGTTACGAGTTTGTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR GCA 72 bp | AGTGATCCTGCTGGTCTAAGACACCATGAAAATCACTaGTTCACAATAATCATGGCTATTTTTATTAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SDPAGLRHHENH*FTIIMAIFIKC Trigger: GCACTTAATAAAAATAGCCATGATTATTGTGAAGCAGTGATTTTCATGGTGTCTTAGACCAGCAGGATCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR TCA 90 bp | ACAAGACAACTCCCACGCCTAGGGGTCAGGGAACACTGTAGAAAAGGGAGTAGACGGCCGGCATCTCCTTaGGAGGAATGTGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TRQLPRLGVREHCRKGSRRPASP*EECGQS Trigger: GGACTGGCCACATTCCTCTCAAGGAGATGCCGGCCG...TCTACTCCCTTTTCTACAGTGTTCCCTGACCCCTAGGCGTGGGAGTTGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR GCA 90 bp | CATGGTATAATGAATACATGGGTTCCTTGGACAACAATTAGAAGCTCAGTGTTCCAGTCCCGCCGTCCCTaGAGCAGCGCAGGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: HGIMNTWVPWTTIRSSVFQSRRP*SSAGST Trigger: GGTGCTGCCTGCGCTGCTGCAGGGACGGCGGGACTG...GAACACTGAGCTTCTAATTGTTGTCCAAGGAACCCATGTATTCATTATACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | TCTGATAACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATCAGTCCCGCCGTCCCTaGAGCAGCGCAGGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SDNFLVFQKGNRKQGYNNQSRRP*SSAGST Trigger: GGTGCTGCCTGCGCTGCTGCAGGGACGGCGGGACTG...ATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGTTATCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGAGAAACTCAGCAGCAGAGGACAGAAGGAAACTGGGCAACTGTTCTCTGTCTGTTCCCATGTGCTaGGTGTCCAACTGTACGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLRNSAAEDRRKLGNCSLSVPMC*VSNCTA Trigger: GGCCGTACAGTTGGACACGCAGCACATGGGAACAGA...CAGAGAACAGTTGCCCAGTTTCCTTCTGTCCTCTGCTGCTGAGTTTCTCAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR GCA 90 bp | TCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCCTGCTCATCACCAGGCTATaGATGTCTCGGCCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGLGPRMSPILKSSPVILLITRL*MSRPRG Trigger: TCCTCTTGGCCGAGACATGCATAGCCTGGTGATGAG...CAGGATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR TCA 90 bp | ACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATACAGCAACGGCCGGCATCTCCTTaGGAGGAATGTGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSFKKATESRDTTIQQRPASP*EECGQS Trigger: GGACTGGCCACATTCCTCTCAAGGAGATGCCGGCCG...TTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR TCA 90 bp | AAGTCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCTGTCCCTCGGATACCTaGTGCTGGACAATGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KSGLGPRMSPILKSSPVICPSDT*CWTMHV Trigger: AACATGCATTGTCCAGCATCAGGTATCCGAGGGACA...GATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR CCA 90 bp | TCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCCTGGTCAACATATACAACTaGATACACTGTCCCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: SGLGPRMSPILKSSPVILVNIYN*IHCPSD Trigger: ATCCGAGGGACAGTGTATCCAGTTGTATATGTTGAC...CAGGATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR GCA 90 bp | ACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATACAGCAATCTGTTCCCATGTGCTaGGTGTCCAACTGTACGGCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSFKKATESRDTTIQQSVPMC*VSNCTA Trigger: GGCCGTACAGTTGGACACGCAGCACATGGGAACAGA...TTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | ACAGGTTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATACTGAGGAAGGCTGTTTaGTGGCAGCCTGTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGSPYTALVVWVLIILTILRKAV*WQPVFL Trigger: GAGAAAAACAGGCTGCCAGCAAACAGCCTTCCTCAG...TATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | TCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCCTGCCTGATGCTGGACAATaGATGTTTTTCCCATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SGLGPRMSPILKSSPVILPDAGQ*MFFPFK Trigger: TTTGAATGGGAAAAACATGCATTGTCCAGCATCAGG...CAGGATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR CCA 90 bp | ACAGGTTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATAGATGTAAGGGTGCACTaGCTAAACAACCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TGSPYTALVVWVLIILTIDVRVH*LNNLQC Trigger: GCACTGGAGGTTGTTTAGCCAGTGCACCCTTACATC...TATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | ACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATACAGCAACTCATCACCAGGCTATaGATGTCTCGGCCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TSSSFKKATESRDTTIQQLITRL*MSRPRG Trigger: TCCTCTTGGCCGAGACATGCATAGCCTGGTGATGAG...TTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR CAA 72 bp | AGTCACAGGCTCTCAGCATGTCAGTATGATTACCCTTaGTGTAAGGTAGACTCTGAGAAACTCAGCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SHRLSACQYDYP*CKVDSEKLSSR Trigger: TCTGCTGCTGAGTTTCTCAGAGTCTACCTTACACAAAGGGTAATCATACTGACATGCTGAGAGCCTGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| 3UTR CAA 72 bp | AGGCTCCTAGTCCTCATCCCTCCGTGGAACTTTTCTTaGCAACAGATCCATTTTAACGATCCACTTACAACA | + |
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Preference number: 4 (lower is better) Translates to: RLLVLIPPWNFS*QQIHFNDPLTT Trigger: TGTTGTAAGTGGATCGTTAAAATGGATCTGTTGCAAAGAAAAGTTCCACGGAGGGATGAGGACTAGGAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR GCA 90 bp | CATGGTATAATGAATACATGGGTTCCTTGGACAACAATTAGAAGCTCAGTGTTCCTGAGGAAGGCTGTTTaGTGGCAGCCTGTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HGIMNTWVPWTTIRSSVFLRKAV*WQPVFL Trigger: GAGAAAAACAGGCTGCCAGCAAACAGCCTTCCTCAG...GAACACTGAGCTTCTAATTGTTGTCCAAGGAACCCATGTATTCATTATACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR CCA 90 bp | AAGGCAACAGAAAGCAGGGATACAACAATACAGCAAAAGAAGCAGTTTCAGTTTGATGTAAGGGTGCACTaGCTAAACAACCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: KATESRDTTIQQKKQFQFDVRVH*LNNLQC Trigger: GCACTGGAGGTTGTTTAGCCAGTGCACCCTTACATC...AAACTGAAACTGCTTCTTTTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| 3UTR CAA 72 bp | ACCATGACACAAACTCGTAACAATCGAAATGCAGAGTaGTGGAACACAGTCCCAAGGGATACATCTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: TMTQTRNNRNAE*WNTVPRDTSTR Trigger: TCTTGTAGATGTATCCCTTGGGACTGTGTTCCACAACTCTGCATTTCGATTGTTACGAGTTTGTGTCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR TCA 90 bp | TTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATATAGACTTCAAGTTAACTTTCTaGGTTGCAACACCTATACCC | + |
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Preference number: 4 (lower is better) Translates to: FSLHSPGCLGTYNTHYIDFKLTF*VATPIP Trigger: GGGTATAGGTGTTGCAACTCAGAAAGTTAACTTGAA...GTCTATATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | TTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATATAGACGTTAACTTTCTGAGTTaGAACACCTATACCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSLHSPGCLGTYNTHYIDVNFLS*NTYTPD Trigger: ATCTGGGGTATAGGTGTTGCAACTCAGAAAGTTAAC...GTCTATATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | CGCACAGACGAGCTAACATTATGCAGACTGAGCAGATTACATTTAGGAATATACCTGGCAATCCAGAATTaGACTGTCGTCAACATATAC | + |
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Preference number: 4 (lower is better) Translates to: RTDELTLCRLSRLHLGIYLAIQN*TVVNIY Trigger: GTATATGTTGACGACAGTGCAATTCTGGATTGCCAG...GTATATTCCTAAATGTAATCTGCTCAGTCTGCATAATGTTAGCTCGTCTGTGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR TCA 90 bp | ACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATACAGCAATTCAAGTTAACTTTCTaGGTTGCAACACCTATACCC | + |
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Preference number: 4 (lower is better) Translates to: TSSSFKKATESRDTTIQQFKLTF*VATPIP Trigger: GGGTATAGGTGTTGCAACTCAGAAAGTTAACTTGAA...TTGCTGTATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR GCA 90 bp | TCAAAAAGGACAGGGAGACACAAAATTATTGGATTACAGACTATGGTGACTCAACTGGCAATCCAGAATTaGACTGTCGTCAACACTACA | + |
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Preference number: 4 (lower is better) Translates to: SKRTGRHKIIGLQTMVTQLAIQN*TVVNTT Trigger: TGTAGTGTTGACGACAGTGCAATTCTGGATTGCCAG...TTGAGTCACCATAGTCTGTAATCCAATAATTTTGTGTCTCCCTGTCCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100496.5 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCCTGCTGTTTTTCTCTTCGTaGTTGTGGTACAAGGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: SGLGPRMSPILKSSPVILLFFSS*LWYKAP Trigger: CGGAGCCTTGTACCACAACAACGAAGAGAAAAACAG...CAGGATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTGGGTCCAAGAATGTCCCCTATTCTAAAGAGTTCCCCAGTGATCCTGTTTTTCTCTTCGTTGTaGTGGTACAAGGCTCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SGLGPRMSPILKSSPVILFFSSL*WYKAPS Trigger: TGACGGAGCCTTGTACCACAACAACGAAGAGAAAAA...CAGGATCACTGGGGAACTCTTTAGAATAGGGGACATTCTTGGACCCAGCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS TCA 90 bp | CTATGCATGTCTCGGCCAAGAGGAATCTGGTTCAAGTTAACTTTCTaGGTTGCAACACCTATACCCCAGATTCCAGTAGACTGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: LCMSRPRGIWFKLTF*VATPIPQIPVDWIL Trigger: CAAAATCCAGTCTACTGGAATCTGGGGTATAGGTGTTGCAACTCAGAAAGTTAACTTGAACCAGATTCCTCTTGGCCGAGACATGCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR CAA 90 bp | CAGACTGCTCTTCTGAAGGTCCAAAGTTCAATTCCCAGCAACCATATAGTGGCTACTGGCAATCCAGAATaGCACTGTCGTCAACATATA | + |
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Preference number: 5 (lower is better) Translates to: QTALLKVQSSIPSNHIVATGNPE*HCRQHI Trigger: TATATGTTGACGACAGTGCAATTCTGGATTGCCAGT...AGCCACTATATGGTTGCTGGGAATTGAACTTTGGACCTTCAGAAGAGCAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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| CDS-3UTR CAA 90 bp | TTCTCCCTACACAGCCCTGGTTGTCTGGGTACTTATAATACTCACTATATAGACACTGGCAATCCAGAATaGCACTGTCGTCAACACTAC | + |
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Preference number: 5 (lower is better) Translates to: FSLHSPGCLGTYNTHYIDTGNPE*HCRQHY Trigger: GTAGTGTTGACGACAGTGCAATTCTGGATTGCCAGT...GTCTATATAGTGAGTATTATAAGTACCCAGACAACCAGGGCTGTGTAGGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100496.5 |
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| CDS-3UTR CAA 90 bp | GATAACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATACACTGTTTTTCTCTTCGTaGTTGTGGTACAAGGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: DNFLVFQKGNRKQGYNNTLFFSS*LWYKAP Trigger: CGGAGCCTTGTACCACAACAACGAAGAGAAAAACAG...TGTATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS-3UTR CAA 90 bp | TCTGATAACTTCCTCGTCTTTCAAAAAGGCAACAGAAAGCAGGGATACAACAATTTTTTCTCTTCGTTGTaGTGGTACAAGGCTCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SDNFLVFQKGNRKQGYNNFFSSL*WYKAPS Trigger: TGACGGAGCCTTGTACCACAACAACGAAGAGAAAAA...ATTGTTGTATCCCTGCTTTCTGTTGCCTTTTTGAAAGACGAGGAAGTTATCAGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS TCA 72 bp | TGTGCTGCGTGTCCAACTGTACGGCCGGCATCTCCTTaGGAGGAATGTGGCCAGTCCCGCCGTCCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CAACPTVRPASP*EECGQSRRPCS Trigger: GCTGCAGGGACGGCGGGACTGGCCACATTCCTCTCAAGGAGATGCCGGCCGTACAGTTGGACACGCAGCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS CAA 72 bp | ATGTGCTGCGTGTCCAACTGTACGGCCGGCATCTCCTaGAGAGGAATGTGGCCAGTCCCGCCGTCCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: MCCVSNCTAGIS*RGMWPVPPSLQ Trigger: CTGCAGGGACGGCGGGACTGGCCACATTCCTCTCAAGGAGATGCCGGCCGTACAGTTGGACACGCAGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022497.15 ENSMUST00000100496.5 |
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| CDS TCA 72 bp | AACATATACAACTGGATACACTGTCCCTCGGATACCTaGTGCTGGACAATGCATGTTTTTCCCATTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: NIYNWIHCPSDT*CWTMHVFPIQI Trigger: TATTTGAATGGGAAAAACATGCATTGTCCAGCATCAGGTATCCGAGGGACAGTGTATCCAGTTGTATATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022497.15 |
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