Pregenerated sensors for SPRYD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051346Ensembl transcript IDs: ENSMUST00000061995.10
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGCTGAGGTACAACTGAGGAAGCCAGAACCCAAGAATCTGAGGTaGATCAGAGAAAAGGCCAAGCCTGTGGCTGCCACTCCTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SAEVQLRKPEPKNLR*IREKAKPVAATPPA Trigger: GGCTGGAGGAGTGGCAGCCACAGGCTTGGCCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTGGCTTCCTCAGTTGTACCTCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR GCA 90 bp | TCTCTTTCCCTTTGTCACATAACTGGCACAATGGTTATGGCAAACTaGCTAGGTATCAGGTATCCAGAAGACAGATGGACTCAGAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: SLSLCHITGTMVMAN*LGIRYPEDRWTQSG Trigger: TCCACTCTGAGTCCATCTGTCTTCTGGATACCTGATACCTAGGCAGTTTGCCATAACCATTGTGCCAGTTATGTGACAAAGGGAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR GCA 90 bp | CAATATTGCACAAAGGATCCCAACAGAATTGTGAGAGCTACCAGTTaGTTGAAACAAAGTAAAATCGCTTTAGACACTAAGGACAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: QYCTKDPNRIVRATS*LKQSKIALDTKDRK Trigger: CTTTCTGTCCTTAGTGTCTAAAGCGATTTTACTTTGTTTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTTTGTGCAATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGACGGGCCGAGAGGCAGGACCGCAGGACTGAACAGTCTAAGGTGTGTGGGCGTGAGAGCTACCAGTTaGTTGAAACAAAGTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: RDGPRGRTAGLNSLRCVGVRATS*LKQSKI Trigger: GATTTTACTTTGTTTCAAGCAACTGGTAGCTCTCAC...GCCCACACACCTTAGACTGTTCAGTCCTGCGGTCCTGCCTCTCGGCCCGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR-3UTR TCA 90 bp | ATCGAGGGTAACGTTTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTCAGAACCCAAGAATCTaGGGTGCATCAGAGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IEGNVSGTRAIHVSLVSLQNPRI*GASEKR Trigger: CCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTG...AAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAAACGTTACCCTCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR-3UTR CCA 90 bp | AACTGCCTAGGTATCAGGTATCCAGAAGACAGATGGACTCAGAGTGGAGATAGCGGGCCCAGGGGAAGATaGCTACAATATTGCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: NCLGIRYPEDRWTQSGDSGPRGR*LQYCTK Trigger: CTTTGTGCAATATTGTAGCCATCTTCCCCTGGGCCC...GCTATCTCCACTCTGAGTCCATCTGTCTTCTGGATACCTGATACCTAGGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR CAA 90 bp | TTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTTCCCTTaGTCACATAACTGGCACAATGGTTATGGCAAACTGCCTAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: FWHQSHTCLPSVSFP*SHNWHNGYGKLPRY Trigger: ATACCTAGGCAGTTTGCCATAACCATTGTGCCAGTTATGTGACAAAGGGAAAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR-3UTR GCA 90 bp | GTACAACTGAGGAAGCCAGAACCCAAGAATCTGAGGTGCATCAGAGAAAAGGCCAGATGGCTACAATATTaGACAAAGGATCCCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VQLRKPEPKNLRCIREKARWLQY*TKDPNR Trigger: TCTGTTGGGATCCTTTGTGCAATATTGTAGCCATCT...GGCCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTGGCTTCCTCAGTTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR TCA 72 bp | GTGTGGGCACAAGTAGAAGGACCCAAAGAACTGGCCTaGGGAGGCGAATCCCCTGATGACCTAGGAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: VWAQVEGPKELA*GGESPDDLGNW Trigger: CCAGTTTCCTAGGTCATCAGGGGATTCGCCTCCTCAGGCCAGTTCTTTGGGTCCTTCTACTTGTGCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR GCA 72 bp | GTACAACTGAGGAAGCCAGAACCCAAGAATCTGAGGTaGATCAGAGAAAAGGCCAAGCCTGTGGCTGCCACT | + |
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Preference number: 3 (lower is better) Translates to: VQLRKPEPKNLR*IREKAKPVAAT Trigger: AGTGGCAGCCACAGGCTTGGCCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTGGCTTCCTCAGTTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR CCA 72 bp | GCAAACTGCCTAGGTATCAGGTATCCAGAAGACAGATaGACTCAGAGTGGAGATAGCTGCATCTGGGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: ANCLGIRYPEDR*TQSGDSCIWVG Trigger: TCCAACCCAGATGCAGCTATCTCCACTCTGAGTCCATCTGTCTTCTGGATACCTGATACCTAGGCAGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR TCA 72 bp | ACATTCTGTGGCCAAGGGAGATGGGAGTTGTGGGTCTaGACAGGCTCCAAAATGGATTGTGTAAAGTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TFCGQGRWELWV*TGSKMDCVKLS Trigger: AGACAACTTTACACAATCCATTTTGGAGCCTGTTCAGACCCACAACTCCCATCTCCCTTGGCCACAGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR CCA 72 bp | TGTCTCCCTAGTGTCTCTTTCCCTTTGTCACATAACTaGCACAATGGTTATGGCAAACTGCCTAGGTATCAG | + |
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Preference number: 3 (lower is better) Translates to: CLPSVSFPLSHN*HNGYGKLPRYQ Trigger: CTGATACCTAGGCAGTTTGCCATAACCATTGTGCCAGTTATGTGACAAAGGGAAAGAGACACTAGGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR TCA 72 bp | CACCATTGTAGCACCCAGGGTCAGACAAGTCCAAACTaGATATTCCGCATACATATTCAACTGTTTCACCAG | + |
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Preference number: 3 (lower is better) Translates to: HHCSTQGQTSPN*IFRIHIQLFHQ Trigger: CTGGTGAAACAGTTGAATATGTATGCGGAATATTCAGTTTGGACTTGTCTGACCCTGGGTGCTACAATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR-3UTR CAA 90 bp | ATACTGCTTTTATTAAGTACATTCTGTGGCCAAGGGAGATGGGAGTTGTGGGTCAGAGCTACCAGTTGCTaGAAACAAAGTAAAATCGCT | + |
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Preference number: 3 (lower is better) Translates to: ILLLLSTFCGQGRWELWVRATSC*KQSKIA Trigger: AGCGATTTTACTTTGTTTCAAGCAACTGGTAGCTCT...GACCCACAACTCCCATCTCCCTTGGCCACAGAATGTACTTAATAAAAGCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR GCA 72 bp | ACAAAGGATCCCAACAGAATTGTGAGAGCTACCAGTTaGTTGAAACAAAGTAAAATCGCTTTAGACACTAAG | + |
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Preference number: 3 (lower is better) Translates to: TKDPNRIVRATS*LKQSKIALDTK Trigger: CTTAGTGTCTAAAGCGATTTTACTTTGTTTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | GCCCCCAAAACAAGTTACATGTGGATAAGGGACGGGCCGAGAGGCAGGACCGCAACTTCGAGTCCTGAGTaGGTTAGCAGCTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: APKTSYMWIRDGPRGRTATSSPE*VSSSPS Trigger: GGATGGAGAGCTGCTAACCCACTCAGGACTCGAAGT...TGCGGTCCTGCCTCTCGGCCCGTCCCTTATCCACATGTAACTTGTTTTGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR TCA 90 bp | AACTGCCTAGGTATCAGGTATCCAGAAGACAGATGGACTCAGAGTGGAGATAGCCACCCGTGTCGCCTCTaGAGAGTGCCAGGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NCLGIRYPEDRWTQSGDSHPCRL*RVPGCC Trigger: ACAGCAGCCTGGCACTCTTCAGAGGCGACACGGGTG...GCTATCTCCACTCTGAGTCCATCTGTCTTCTGGATACCTGATACCTAGGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR TCA 90 bp | ATCGAGGGTAACGTTTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTAGTGTCTGCCACTGGTaGCTGTGGTGTCTCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IEGNVSGTRAIHVSLVSLSVCHW*LWCLRA Trigger: TGCTCGGAGACACCACAGTCACCAGTGGCAGACACT...AAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAAACGTTACCCTCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | GTACAACTGAGGAAGCCAGAACCCAAGAATCTGAGGTGCATCAGAGAAAAGGCCGGACATGTCCACGTCTaGCACTCCTATCCGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: VQLRKPEPKNLRCIREKAGHVHV*HSYPEL Trigger: CAGTTCCGGATAGGAGTGGCAGACGTGGACATGTCC...GGCCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTGGCTTCCTCAGTTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | ACAATATTGCACAAAGGATCCCAACAGAATTGTGAGAGCTACCAGTTGCTTGAAGTCTCCGAGCACCACTaGCCACTCCCGGAAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TILHKGSQQNCESYQLLEVSEHH*PLPEAL Trigger: GAGCGCTTCCGGGAGTGGGCAGTGGTGCTCGGAGAC...TTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTTTGTGCAATATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | TATCCAGAAGACAGATGGACTCAGAGTGGAGATAGCTGCATCTGGGTTGGACTGACTCCTATCCGGAACTaGTGGGAGCGCTTCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: YPEDRWTQSGDSCIWVGLTPIRN*WERFTV Trigger: AACAGTGAAGCGCTCCCAGCAGTTCCGGATAGGAGT...CAGTCCAACCCAGATGCAGCTATCTCCACTCTGAGTCCATCTGTCTTCTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | TTTGGCTGTATACCTAGCTCTTACAGAGTAGGGCCCAGGGGAAGATGGCTACAAACATGCTGTGCCACTTaGGCTGGGCATAGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: FGCIPSSYRVGPRGRWLQTCCAT*AGHRRT Trigger: TGTTCTCCTATGCCCAGCGCAAGTGGCACAGCATGT...TTGTAGCCATCTTCCCCTGGGCCCTACTCTGTAAGAGCTAGGTATACAGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | CGTTTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTTCCCTTTGTCACAGGCTCAGCTTCTTTaGCTCATAGTCCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RFWHQSHTCLPSVSFPLSQAQLL*LIVQQQ Trigger: CTGCTGCTGGACTATGAGGCAAAGAAGCTGAGCCTG...TGACAAAGGGAAAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | TTTGGCTGTATACCTAGCTCTTACAGAGTAGGGCCCAGGGGAAGATGGCTACAACAGCCCCACCTTCTCTaGTTGCCCAATACCCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: FGCIPSSYRVGPRGRWLQQPHLL*LPNTLN Trigger: ATTAAGGGTATTGGGCAACCAGAGAAGGTGGGGCTG...TTGTAGCCATCTTCCCCTGGGCCCTACTCTGTAAGAGCTAGGTATACAGCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | ATACTGCTTTTATTAAGTACATTCTGTGGCCAAGGGAGATGGGAGTTGTGGGTCTTTCGTTGGCCAACATaGTGTGCCACTTGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILLLLSTFCGQGRWELWVFRWPT*CATCAG Trigger: CCCAGCGCAAGTGGCACAGCATGTTGGCCAACGAAA...GACCCACAACTCCCATCTCCCTTGGCCACAGAATGTACTTAATAAAAGCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | ATCGAGGGTAACGTTTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTCCCACCTTCTCTGGTTaGCCAATACCCTTAATTGGA | + |
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Preference number: 4 (lower is better) Translates to: IEGNVSGTRAIHVSLVSLPTFSG*PIPLIG Trigger: TCCAATTAAGGGTATTGGGCAACCAGAGAAGGTGGG...AAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAAACGTTACCCTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | CCTTTGTCACATAACTGGCACAATGGTTATGGCAAACTGCCTAGGTATCAGGTAAATTCAGGGCCACCTTaGTGGGTTCCAGTCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: PLSHNWHNGYGKLPRYQVNSGPP*WVPVPP Trigger: TGGTGGGACTGGAACCCACCAAGGTGGCCCTGAATT...TACCTGATACCTAGGCAGTTTGCCATAACCATTGTGCCAGTTATGTGACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR GCA 90 bp | ACAATATTGCACAAAGGATCCCAACAGAATTGTGAGAGCTACCAGTTGCTTGAAAAGAGCAAAAGCAGGTaGCACTGGGCCCCGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: TILHKGSQQNCESYQLLEKSKSR*HWAPEI Trigger: GATTTCCGGGGCCCAGTGGCACCTGCTTTTGCTCTT...TTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTTTGTGCAATATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | ATCGAGGGTAACGTTTCTGGCACCAGAGCCATACATGTCTCCCTAGTGTCTCTTCCCAATACCCTTAATTaGAGCTTTTTCGTTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: IEGNVSGTRAIHVSLVSLPNTLN*SFFVGQ Trigger: TTGGCCAACGAAAAAGCTCCAATTAAGGGTATTGGG...AAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAGAAACGTTACCCTCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | ATACTGCTTTTATTAAGTACATTCTGTGGCCAAGGGAGATGGGAGTTGTGGGTCTTGGAGCTTTTTCGTTaGCCAACATGCTGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: ILLLLSTFCGQGRWELWVLELFR*PTCCAT Trigger: AGTGGCACAGCATGTTGGCCAACGAAAAAGCTCCAA...GACCCACAACTCCCATCTCCCTTGGCCACAGAATGTACTTAATAAAAGCAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CCA 90 bp | AAGGATCCCAACAGAATTGTGAGAGCTACCAGTTGCTTGAAACAAAGTAAAATCAAAAGCAGGTGCCACTaGGCCCCGGAAATCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KDPNRIVRATSCLKQSKIKSRCH*APEICL Trigger: CAGACAGATTTCCGGGGCCCAGTGGCACCTGCTTTT...GATTTTACTTTGTTTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR CAA 72 bp | CAGAGCCATACATGTCTCCCTAGTGTCTCTTTCCCTTaGTCACATAACTGGCACAATGGTTATGGCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: QSHTCLPSVSFP*SHNWHNGYGKL Trigger: CAGTTTGCCATAACCATTGTGCCAGTTATGTGACAAAGGGAAAGAGACACTAGGGAGACATGTATGGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| 3UTR CAA 72 bp | AAGGATCCCAACAGAATTGTGAGAGCTACCAGTTGCTaGAAACAAAGTAAAATCGCTTTAGACACTAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KDPNRIVRATSC*KQSKIALDTKD Trigger: GTCCTTAGTGTCTAAAGCGATTTTACTTTGTTTCAAGCAACTGGTAGCTCTCACAATTCTGTTGGGATCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CAA 90 bp | AGGGACGGGCCGAGAGGCAGGACCGCAGGACTGAACAGTCTAAGGTGTGTGGGCCCCACCAAGCCATATTaGACACCCGTGTCGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RDGPRGRTAGLNSLRCVGPTKPY*TPVSPL Trigger: CAGAGGCGACACGGGTGTCAAATATGGCTTGGTGGG...GCCCACACACCTTAGACTGTTCAGTCCTGCGGTCCTGCCTCTCGGCCCGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS GCA 90 bp | ACGATCATCAGCACCAACGCAGCTGTCCCGGGACATGTCCACGTCTaGCACTCCTATCCGGAACTGCTGGGAGCGCTTCACTGTTACCTC | + |
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Preference number: 5 (lower is better) Translates to: TIISTNAAVPGHVHV*HSYPELLGALHCYL Trigger: GAGGTAACAGTGAAGCGCTCCCAGCAGTTCCGGATAGGAGTGGCAGACGTGGACATGTCCCGGGACAGCTGCGTTGGTGCTGATGATCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS CCA 90 bp | GCAAAAGCAGGTGCCACTGGGCCCCGGAAATCTGTCTGTAGTGTGTaGATCACAGAGATCCGACTCACATCCACCAGGCTCAGCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: AKAGATGPRKSVCSV*ITEIRLTSTRLSFF Trigger: AAAGAAGCTGAGCCTGGTGGATGTGAGTCGGATCTCTGTGATCCACACACTACAGACAGATTTCCGGGGCCCAGTGGCACCTGCTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CAA 90 bp | CCCAAGAATCTGAGGTGCATCAGAGAAAAGGCCAAGCCTGTGGCTGCCACTCCTCCCCACCTTCTCTGGTaGCCCAATACCCTTAATTGG | + |
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Preference number: 5 (lower is better) Translates to: PKNLRCIREKAKPVAATPPHLLW*PNTLNW Trigger: CCAATTAAGGGTATTGGGCAACCAGAGAAGGTGGGG...AGGAGTGGCAGCCACAGGCTTGGCCTTTTCTCTGATGCACCTCAGATTCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS-3UTR CAA 90 bp | ACAACTGAGGAAGCCAGAACCCAAGAATCTGAGGTGCATCAGAGAAAAGGCCAACCAGGCTCAGCTTCTTaGCCTCATAGTCCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TTEEARTQESEVHQRKGQPGSAS*PHSPAA Trigger: TGCTGCTGGACTATGAGGCAAAGAAGCTGAGCCTGG...TTGGCCTTTTCTCTGATGCACCTCAGATTCTTGGGTTCTGGCTTCCTCAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS GCA 72 bp | AGCACCAACGCAGCTGTCCCGGGACATGTCCACGTCTaGCACTCCTATCCGGAACTGCTGGGAGCGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: STNAAVPGHVHV*HSYPELLGALH Trigger: GTGAAGCGCTCCCAGCAGTTCCGGATAGGAGTGGCAGACGTGGACATGTCCCGGGACAGCTGCGTTGGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS CAA 72 bp | GCCACCTTGGTGGGTTCCAGTCCCACCAAGCCATATTaGACACCCGTGTCGCCTCTGAAGAGTGCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATLVGSSPTKPY*TPVSPLKSARL Trigger: CAGCCTGGCACTCTTCAGAGGCGACACGGGTGTCAAATATGGCTTGGTGGGACTGGAACCCACCAAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS CCA 72 bp | GGTGCCACTGGGCCCCGGAAATCTGTCTGTAGTGTGTaGATCACAGAGATCCGACTCACATCCACCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GATGPRKSVCSV*ITEIRLTSTRL Trigger: GAGCCTGGTGGATGTGAGTCGGATCTCTGTGATCCACACACTACAGACAGATTTCCGGGGCCCAGTGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS GCA 72 bp | TTGGAGCTTTTTCGTTGGCCAACATGCTGTGCCACTTaGGCTGGGCATAGGAGAACACCCAGGAACGATCAT | + |
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Preference number: 6 (lower is better) Translates to: LELFRWPTCCAT*AGHRRTPRNDH Trigger: ATGATCGTTCCTGGGTGTTCTCCTATGCCCAGCGCAAGTGGCACAGCATGTTGGCCAACGAAAAAGCTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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| CDS CCA 72 bp | CAGCCCCACCTTCTCTGGTTGCCCAATACCCTTAATTaGAGCTTTTTCGTTGGCCAACATGCTGTGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: QPHLLWLPNTLN*SFFVGQHAVPL Trigger: AAGTGGCACAGCATGTTGGCCAACGAAAAAGCTCCAATTAAGGGTATTGGGCAACCAGAGAAGGTGGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061995.10 |
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