Pregenerated sensors for SPRYD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036966Ensembl transcript IDs: ENSMUST00000154032.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGGTGCCTTGGCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTTaGAGAAGAGTGCAGACAAGGAGATGGCAGCAAAGGCTGAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PVPWLHPGEPGLEVL*RRVQTRRWQQRLKS Trigger: GGACTTCAGCCTTTGCTGCCATCTCCTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAAGGCACCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR TCA 90 bp | AGCACGACAACAAACCCCCTCCCCAGCCCTACCCACTGTGCAAACTaGGACCAAGAGCTCCGGCTGCTTCTCTCCCTGTTGATGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: STTTNPLPSPTHCAN*DQELRLLLSLLMGW Trigger: CCATCCCATCAACAGGGAGAGAAGCAGCCGGAGCTCTTGGTCTCAGTTTGCACAGTGGGTAGGGCTGGGGAGGGGGTTTGTTGTCGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CCA 90 bp | AAACAGCCACAATACAACACATGCCCCGGTGCCTTGGCTCCATCCTaGGGAGCCAGGGCTAGAGGTGCTTTGAAGAAGAGTGCAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: KQPQYNTCPGALAPS*GARARGALKKSADK Trigger: CTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR TCA 90 bp | CGTGTGAGCAGGCAGGAAGCCAAGTTCAGGCTTTCTGCTGTGGGTTaGGGGTGGGACCATCTCTCAGAAAACAATGGAGACCCTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: RVSRQEAKFRLSAVG*GWDHLSENNGDPRC Trigger: ACATCTAGGGTCTCCATTGTTTTCTGAGAGATGGTCCCACCCTCAACCCACAGCAGAAAGCCTGAACTTGGCTTCCTGCCTGCTCACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTTGAAGAAGAGTGCAGACAAGCTCTGGGCCCACCACTaGTCTCAGGCCCAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: APSWGARARGALKKSADKLWAHH*SQAQRQ Trigger: CTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAG...CTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTTCCCAGGGCCTGCTGTaGGAGAAAATGCAGACGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSCCSGQTATIQHMPRCLSQGLL*EKMQTE Trigger: CTCCGTCTGCATTTTCTCTCACAGCAGGCCCTGGGA...AAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTGCGTGTGAGCAGGCAGGAAGCCAAGTTCAGGCTTTCTGCTGTGGGTTGGACAGAAACTGGGGATaGCCTCCCAGGGCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: TVACEQAGSQVQAFCCGLDRNWG*PPRACC Trigger: ACAGCAGGCCCTGGGAGGGCATCCCCAGTTTCTGTC...CAACCCACAGCAGAAAGCCTGAACTTGGCTTCCTGCCTGCTCACACGCAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR CCA 90 bp | ACACATGCCCCGGTGCCTTGGCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTAATCAGGTCAGCAGGTaGGCTTATACCTCCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: THAPVPWLHPGEPGLEVLNQVSR*AYTSQF Trigger: AAACTGGGAGGTATAAGCCCACCTGCTGACCTGATT...AAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAAGGCACCGGGGCATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTTGAAGAAGAGTGCAGACAAGTGCCCTCCCAGGGCCTaGTGTGAGAGAAAATGCAGA | + |
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Preference number: 2 (lower is better) Translates to: APSWGARARGALKKSADKCPPRA*CERKCR Trigger: TCTGCATTTTCTCTCACAGCAGGCCCTGGGAGGGCA...CTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGAAGCCAAGTTCAGGCTTTCTGCTGTGGGTTGAGGGTGGGACCATCTATCAATACTGCCCTCTaGGCCCACCACTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QAGSQVQAFCCGLRVGPSINTAL*AHHCSQ Trigger: CTGAGAGCAGTGGTGGGCCCAGAGGGCAGTATTGAT...AGATGGTCCCACCCTCAACCCACAGCAGAAAGCCTGAACTTGGCTTCCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTCACACACACACACAGTTGCGTGTGAGCAGGCAGGAAGCCAAGTTCAGCAGAGAGGTGCAGCCTaGGCTGACAGAAACTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SLSHTHTVACEQAGSQVQQRGAA*ADRNWG Trigger: TCCCCAGTTTCTGTCAGCTCAGGCTGCACCTCTCTG...CTGAACTTGGCTTCCTGCCTGCTCACACGCAACTGTGTGTGTGTGTGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGGCTCAGCAACTGGCTTACATaGGGAGAGGGGATGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLWANSHNTTHAPVPWLSNWLT*GEGMKR Trigger: TCTCTTCATCCCCTCTCCTCATGTAAGCCAGTTGCT...GAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGGGCTAGAGGTGCTTTaGAGAAGAGTGCAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: PSCCSGQTATIQHMPRCLGLEVL*RRVQTR Trigger: CCTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCC...AAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCGGGGAGCTGTGGTAGACAGGGACAGACTGCCTCTACTCGACCCTCACCCTTGCTGTGAGAGAAAATaGAGACGGAGAGGGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: IRGAVVDRDRLPLLDPHPCCERK*RRRGQM Trigger: CATCTGCCCTCTCCGTCTGCATTTTCTCTCACAGCA...AGGGTGAGGGTCGAGTAGAGGCAGTCTGTCCCTGTCTACCACAGCTCCCCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR TCA 72 bp | ACAAACCCCCTCCCCAGCCCTACCCACTGTGCAAACTaGGACCAAGAGCTCCGGCTGCTTCTCTCCCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: TNPLPSPTHCAN*DQELRLLLSLL Trigger: CAACAGGGAGAGAAGCAGCCGGAGCTCTTGGTCTCAGTTTGCACAGTGGGTAGGGCTGGGGAGGGGGTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CCA 72 bp | GCAAACAGCCACAATACAACACATGCCCCGGTGCCTTaGCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: ANSHNTTHAPVP*LHPGEPGLEVL Trigger: AAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CCA 72 bp | CAAGGGGCTCCTCCCATTCATATCAATACTGCCCTCTaGGCCCACCACTGCTCTCAGGCCCAGAGACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QGAPPIHINTAL*AHHCSQAQRQR Trigger: TCTCTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAGGGCAGTATTGATATGAATGGGAGGAGCCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTTGAAGAAGAGTGCAGACAAGCACACACACACACAGTaGCGTGTGAGCAGGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: APSWGARARGALKKSADKHTHTQ*RVSRQE Trigger: TTCCTGCCTGCTCACACGCAACTGTGTGTGTGTGTG...CTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR TCA 72 bp | TGGCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTTaGAGAAGAGTGCAGACAAGGAGATGGCAGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: WLHPGEPGLEVL*RRVQTRRWQQR Trigger: CCTTTGCTGCCATCTCCTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CCA 72 bp | CAATACAACACATGCCCCGGTGCCTTGGCTCCATCCTaGGGAGCCAGGGCTAGAGGTGCTTTGAAGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: QYNTCPGALAPS*GARARGALKKS Trigger: ACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAAGGCACCGGGGCATGTGTTGTATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCTCACACACACACACAGTTGCGTGTGAGCAGGCAGGAAGCCAAGTTCAGGCTTTCTGCTGTGGGTaGAGGGTGGGACCATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SLSHTHTVACEQAGSQVQAFCCG*RVGPSL Trigger: GAGAGATGGTCCCACCCTCAACCCACAGCAGAAAGC...CTGAACTTGGCTTCCTGCCTGCTCACACGCAACTGTGTGTGTGTGTGAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CCA 72 bp | GTAGGTGAAGAGAAAGAAGGGGCCAAGCTGCTGCTCTaGGCAAACAGCCACAATACAACACATGCCCCGGTG | + |
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Preference number: 3 (lower is better) Translates to: VGEEKEGAKLLL*ANSHNTTHAPV Trigger: CACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTGGCCCCTTCTTTCTCTTCACCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR TCA 72 bp | AGGCAGGAAGCCAAGTTCAGGCTTTCTGCTGTGGGTTaGGGGTGGGACCATCTCTCAGAAAACAATGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: RQEAKFRLSAVG*GWDHLSENNGD Trigger: GTCTCCATTGTTTTCTGAGAGATGGTCCCACCCTCAACCCACAGCAGAAAGCCTGAACTTGGCTTCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | AGACAGGGACAGACTGCCTCTACTCGACCCTCACCCTCGGCAGAGCACCATACCGCGTCCCACAGACTCTaGCGTCATGCAGCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RQGQTASTRPSPSAEHHTASHRL*RHAAGP Trigger: GGGGCCGGCTGCATGACGTCAGAGTCTGTGGGACGC...GGTATGGTGCTCTGCCGAGGGTGAGGGTCGAGTAGAGGCAGTCTGTCCCTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | AACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGAGAAAATGCAGACGGAGAGGGAGTGGGTGCCGAGCCTaGGCCAGCCCCACATCCACG | + |
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Preference number: 4 (lower is better) Translates to: NWGCPPRACCERKCRRRGSGCRA*ASPTST Trigger: CGTGGATGTGGGGCTGGCTCAGGCTCGGCACCCACT...CCCTCTCCGTCTGCATTTTCTCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | TCAATACTGCCCTCTGGGCCCACCACTGCTCTCAGGCCCAGAGACAGAGAGGTGGCCCCACAGCAATGGTaGCCCGGACGCCACTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SILPSGPTTALRPRDREVAPQQW*PGRHCP Trigger: TGGACAGTGGCGTCCGGGGCACCATTGCTGTGGGGC...CACCTCTCTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAGGGCAGTATTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | CCTAGCCCAGCCAGGGGGAGACAGCAGCAACTGGCTTACATGAGGAGAGGGGATCTGGGGACATGGGCATaGTGGTGGAGCCCACCCGTT | + |
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Preference number: 4 (lower is better) Translates to: PSPARGRQQQLAYMRRGDLGTWA*WWSPPV Trigger: AACGGGTGGGCTCCACCATCATGCCCATGTCCCCAG...ATCCCCTCTCCTCATGTAAGCCAGTTGCTGCTGTCTCCCCCTGGCTGGGCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | CACTGGAGCAGAAACGTCAACTGGCACAAGCAGCAAGCTGGGGCACAGGGTGGGGGCCCAGCTCGGCATTaGGGTGCAGCCTTACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HWSRNVNWHKQQAGAQGGGPARH*GAALPP Trigger: AGGAGGTAAGGCTGCACCTCAATGCCGAGCTGGGCC...CCCACCCTGTGCCCCAGCTTGCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | GTGCAGCCTGAGCTGACAGAAACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGATCCTTTGTAGCAGCGTaGCCCAAAGGGGTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQPELTETGDALPGPAVRSFVAA*PKGVPH Trigger: GTGGGGGACCCCTTTGGGCCACGCTGCTACAAAGGA...TCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTTTCTGTCAGCTCAGGCTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | TCAATACTGCCCTCTGGGCCCACCACTGCTCTCAGGCCCAGAGACAGAGAGGTGAGGACACAGGCTCAATaGCACAGCCGATCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SILPSGPTTALRPRDREVRTQAQ*HSRSGP Trigger: GGGACCGGATCGGCTGTGGCATTGAGCCTGTGTCCT...CACCTCTCTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAGGGCAGTATTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGCTCCGGCTGCTTCTCTCCCTGTTGATGGGATGGAGGAGCTCAGGAAACCCAGCCCCACAGCAATaGTGCCCCGGACGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QELRLLLSLLMGWRSSGNPAPQQ*CPGRHC Trigger: ACAGTGGCGTCCGGGGCACCATTGCTGTGGGGCTGG...GTTTCCTGAGCTCCTCCATCCCATCAACAGGGAGAGAAGCAGCCGGAGCTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CACTGGAGCAGAAACGTCAACTGGCACAAGCAGCAAGCTGGGGCACAGGGTGGGGGTCCCCCACACCACTaGCATGGAAGATCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: HWSRNVNWHKQQAGAQGGGPPHH*HGRSSR Trigger: ACGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACC...CCCACCCTGTGCCCCAGCTTGCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | CCATACCAATCAGGTCAGCAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCCACTTTGACCCGAACTaGCGCCCCTTGGCTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PYQSGQQVGLYLPVCSTPHFDPN*RPLARP Trigger: CGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTG...GGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTGCTGACCTGATTGGTATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCACACACACACACAGTTGCGTGTGAGCAGGCAGGAAGCCAAGTTCAGGCTGCGGGTGCTCAGTaGGTGCCGAGCCTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLSHTHTVACEQAGSQVQAAGAQ*VPSLSQ Trigger: CTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGC...CTGAACTTGGCTTCCTGCCTGCTCACACGCAACTGTGTGTGTGTGTGAGAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | ATTCGGGGAGCTGTGGTAGACAGGGACAGACTGCCTCTACTCGACCCTCACCCTCATCCATCTTGTTCATaGGAACAAACCGGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: IRGAVVDRDRLPLLDPHPHPSCS*EQTGAA Trigger: GGCGGCCCCGGTTTGTTCTCATGAACAAGATGGATG...AGGGTGAGGGTCGAGTAGAGGCAGTCTGTCCCTGTCTACCACAGCTCCCCGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGCTCCGGCTGCTTCTCTCCCTGTTGATGGGATGGAGGAGCTCAGGAAACTGCTTGAACCTCTCCTaGTATCGGAAGGCCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: QELRLLLSLLMGWRSSGNCLNLS*YRKART Trigger: GGTCCGGGCCTTCCGATATCAGGAGAGGTTCAAGCA...GTTTCCTGAGCTCCTCCATCCCATCAACAGGGAGAGAAGCAGCCGGAGCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | CTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGGCTCCCTGGTGCAGGTACATaGCATTTCGGACGTTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLWANSHNTTHAPVPWLPGAGT*HFGRSG Trigger: TCCGGAACGTCCGAAATGTCATGTACCTGCACCAGG...GAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | GTGCAGCCTGAGCTGACAGAAACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGACATCCACGATGCTCTTaGCCTTCCCCAAATACTCCA | + |
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Preference number: 4 (lower is better) Translates to: VQPELTETGDALPGPAVRHPRCS*PSPNTP Trigger: TGGAGTATTTGGGGAAGGGCAAGAGCATCGTGGATG...TCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTTTCTGTCAGCTCAGGCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | AACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGAGAAAATGCAGACGGAGAGGGACCTTCTTGCCCTCATaGTCCTGCTCGATCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NWGCPPRACCERKCRRRGTFLPS*SCSISS Trigger: GGAAGAGATCGAGCAGGAGCATGAGGGCAAGAAGGT...CCCTCTCCGTCTGCATTTTCTCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | ATTCGGGGAGCTGTGGTAGACAGGGACAGACTGCCTCTACTCGACCCTCACCCTTGGGAAGAGCCCATCTaGGGACATGGGCATGATGGT | + |
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Preference number: 4 (lower is better) Translates to: IRGAVVDRDRLPLLDPHPWEEPI*GHGHDG Trigger: ACCATCATGCCCATGTCCCCAGATGGGCTCTTCCCA...AGGGTGAGGGTCGAGTAGAGGCAGTCTGTCCCTGTCTACCACAGCTCCCCGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCAGCGAGGTGAAAGAAGATAGTAATGGCTGCGGGTaGTCAGTGGGTGCCGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QVGLYLPVCSTPSEVKEDSNGCG*SVGAEP Trigger: AGGCTCGGCACCCACTGAGCACCCGCAGCCATTACT...ATCTTCTTTCACCTCGCTGGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | TACTGCCCTCTGGGCCCACCACTGCTCTCAGGCCCAGAGACAGAGAGGTGCAGCTTGGTGAAGAAGATCTaGGCAGTCTGCACATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YCPLGPPLLSGPETERCSLVKKI*AVCTSK Trigger: CTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAA...GCTGCACCTCTCTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAGGGCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGGCTCCAGGGTGTCTGTTCTTaGGATAATCCTTCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLLWANSHNTTHAPVPWLQGVCS*DNPSGP Trigger: TGGCCCGGAAGGATTATCCCAAGAACAGACACCCTG...GAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | AACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGAGAAAATGCAGACGGAGAGGGACCGGTAGTGCAAGTTaGGGTCATCCATCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NWGCPPRACCERKCRRRGTGSAS*GHPSCS Trigger: TGAACAAGATGGATGACCTCAACTTGCACTACCGGT...CCCTCTCCGTCTGCATTTTCTCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | TACTGCCCTCTGGGCCCACCACTGCTCTCAGGCCCAGAGACAGAGAGGTGCAGCATACCTCAAAATAATTaGTGTCCTTGGTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: YCPLGPPLLSGPETERCSIPQNN*CPWSGV Trigger: GACCCCTGACCAAGGACAGCAATTATTTTGAGGTAT...GCTGCACCTCTCTGTCTCTGGGCCTGAGAGCAGTGGTGGGCCCAGAGGGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CCATACCAATCAGGTCAGCAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCTCCTCGCCCAGGGAATaGATACCAACTGCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PYQSGQQVGLYLPVCSTPSSPRE*IPTAGK Trigger: CTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGA...GGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTGCTGACCTGATTGGTATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCAGCGAGGTGAAAGAAGATCAGACTCTGACGTCATaGAGCCGGCCCCATTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QVGLYLPVCSTPSEVKEDQTLTS*SRPHSS Trigger: GGATGAATGGGGCCGGCTGCATGACGTCAGAGTCTG...ATCTTCTTTCACCTCGCTGGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| 3UTR CAA 72 bp | TTGGCTCCATCCTGGGGAGCCAGGGCTAGAGGTGCTTaGAAGAAGAGTGCAGACAAGGAGATGGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSWGARARGA*KKSADKEMAAK Trigger: CTTTGCTGCCATCTCCTTGTCTGCACTCTTCTTCAAAGCACCTCTAGCCCTGGCTCCCCAGGATGGAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CCAATCAGGTCAGCAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCAGCGAAAGATCTGGGCAGTCTaGACATCAAAGGACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIRSAGGLIPPSLLNAQRKIWAV*TSKDTG Trigger: GCCTGTGTCCTTTGATGTGCAGACTGCCCAGATCTT...TCGCTGGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTGCTGACCTGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGCTGACAGAAACTGGGGATGCCCTCCCAGGGCCTGCTGTGAGAGAAAATTCTTCCCCTTCCTGGTaGAGGTACATGACATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PELTETGDALPGPAVRENSSPSW*RYMTFR Trigger: CCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGA...ATTTTCTCTCACAGCAGGCCCTGGGAGGGCATCCCCAGTTTCTGTCAGCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | CCAATCAGGTCAGCAGGTGGGCTTATACCTCCCAGTTTGCTCAACGCCCAGCGAAATAATTGCTGTCCTTaGTCAGGGGTCGAGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIRSAGGLIPPSLLNAQRNNCCP*SGVETP Trigger: TGGCGTCTCGACCCCTGACCAAGGACAGCAATTATT...TCGCTGGGCGTTGAGCAAACTGGGAGGTATAAGCCCACCTGCTGACCTGATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | CAAGCTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGCTACAAGGATATGCTTaGACCTCTCCTGATATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAAALGKQPQYNTCPGALLQGYA*TSPDIG Trigger: TCCGATATCAGGAGAGGTTCAAGCATATCCTTGTAG...CAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | GGGAGACAGCAGCAACTGGCTTACATGAGGAGAGGGGATGAAGAGAATTCGGGGTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRQQQLAYMRRGDEENSGSSSPS*CRYMTF Trigger: AAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGA...CCCCGAATTCTCTTCATCCCCTCTCCTCATGTAAGCCAGTTGCTGCTGTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | ATAGACACTAGAATCAAACACTGGAGCAGAAACGTCAACTGGCACAAGCAGCAACCCAGAGTTGCACTTTaGCCCGAACTGGCGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDTRIKHWSRNVNWHKQQPRVAL*PELAPL Trigger: AAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGG...TTGCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTGTTTGATTCTAGTGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CCA 90 bp | ATAGACACTAGAATCAAACACTGGAGCAGAAACGTCAACTGGCACAAGCAGCAACCCACACCACTGCCATaGAAGATCTTCCCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IDTRIKHWSRNVNWHKQQPTPLP*KIFPSS Trigger: AGATGACGGGAAGATCTTCCATGGCAGTGGTGTGGG...TTGCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTGTTTGATTCTAGTGTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR TCA 90 bp | ATAGACACTAGAATCAAACACTGGAGCAGAAACGTCAACTGGCACAAGCAGCAAGTTTCCCATTTTTGGTaGAGAAGATCTGGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDTRIKHWSRNVNWHKQQVSHFW*RRSGQS Trigger: AGACTGCCCAGATCTTCTTCACCAAAAATGGGAAAC...TTGCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTGTTTGATTCTAGTGTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 90 bp | CACAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTTGCACTTTaGCCCGAACTGGCGCCCCTTGGCTCGGCCGTTGTACAGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRLNATADPVPRVAL*PELAPLGSAVVQLA Trigger: GGCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | GGGTGCTCAGTGGGTGCCGAGCCTGAGCCAGCCCCACATCCACGATaGTCTTGCCCTTCCCCAAATACTCCAGCAGCGTCCCACAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GCSVGAEPEPAPHPR*SCPSPNTPAASHRL Trigger: GAGTCTGTGGGACGCTGCTGGAGTATTTGGGGAAGGGCAAGAGCATCGTGGATGTGGGGCTGGCTCAGGCTCGGCACCCACTGAGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | AGACAGGGACAGACTGCCTCTACTCGACCCTCACCCTCGGCAGAGCACCATACCCGGCCCAGCTCGGCATaGAGGTGCAGCCTTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGQTASTRPSPSAEHHTRPSSA*RCSLTS Trigger: GGAGGTAAGGCTGCACCTCAATGCCGAGCTGGGCCG...GGTATGGTGCTCTGCCGAGGGTGAGGGTCGAGTAGAGGCAGTCTGTCCCTGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | CAAAGGACACAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTTaGACTTTGACCCGAACTGGCGCCCCTTGGCTCGGCCGTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: QRTQAQCHSRSGPQS*TLTRTGAPWLGRCT Trigger: TGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGTGTCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | CCCAGCTCGGCATTGAGGTGCAGCCTTACCTCCTCGCCCAGGGAATaGATACCAACTGCTGGGAAGAGCCCATCTGGGGACATGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSSALRCSLTSSPRE*IPTAGKSPSGDMGM Trigger: CATGCCCATGTCCCCAGATGGGCTCTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAATGCCGAGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | ATGCCACAGCCGATCCGGTCCCCAGAGTTGCACTTTGACCCGAACTaGCGCCCCTTGGCTCGGCCGTTGTACAGCTTGCCATCATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MPQPIRSPELHFDPN*RPLARPLYSLPSSA Trigger: TGCTGATGATGGCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | GAGGTGCAGCCTTACCTCCTCGCCCAGGGAATGCATACCAACTGCTaGGAAGAGCCCATCTGGGGACATGGGCATGATGGTGGAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EVQPYLLAQGMHTNC*EEPIWGHGHDGGAH Trigger: GTGGGCTCCACCATCATGCCCATGTCCCCAGATGGGCTCTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 90 bp | CCTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTGGTGCAGGTACATaGCATTTCGGACGTTCCGGACAGCCCGGGCAGTCGGGGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PPLPPLPLPLPGAGT*HFGRSGQPGQSGTR Trigger: TCTTGTCCCCGACTGCCCGGGCTGTCCGGAACGTCCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | ACCATCATGACGCTGTCATCCTCACGGCCCAGCTCGGCATTGAGGTaGAGCCTTACCTCCTCGCCCAGGGAATGCATACCAACTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TIMTLSSSRPSSALR*SLTSSPRECIPTAG Trigger: CCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAATGCCGAGCTGGGCCGTGAGGATGACAGCGTCATGATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | TCTCTCCAGGATCCACAATCTCCACCTCAAAGTAATGGCTGCGGGTaGTCAGTGGGTGCCGAGCCTGAGCCAGCCCCACATCCACGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQDPQSPPQSNGCG*SVGAEPEPAPHPRC Trigger: GCATCGTGGATGTGGGGCTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGCCATTACTTTGAGGTGGAGATTGTGGATCCTGGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | TGTCTCCTTTGTAGCAGCGTGGCCCAAAGGGGTCCCCCACACCACTaGCATGGAAGATCTTCCCGTCATCTGCGTGGTAGGCCACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CLLCSSVAQRGPPHH*HGRSSRHLRGRPQT Trigger: GGTCTGTGGCCTACCACGCAGATGACGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGCTACAAAGGAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | AGGATCCACAATCTCCACCTCAAAGTAATGGCTGCGGGTGCTCAGTaGGTGCCGAGCCTGAGCCAGCCCCACATCCACGATGCTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RIHNLHLKVMAAGAQ*VPSLSQPHIHDALA Trigger: GGCAAGAGCATCGTGGATGTGGGGCTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGCCATTACTTTGAGGTGGAGATTGTGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGCCCCAGAGTTGCACTTaGACCCGAACTGGCGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QAAALGKQPQYNTCPGALPQSCT*TRTGAP Trigger: AGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGG...CAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | AAACCCCCTCCCCAGCCCTACCCACTGTGCAAACTGAGACCAAGAGCTCCGGCTATCCGGTCCCCAGAGTaGCACTTTGACCCGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPPQPYPLCKLRPRAPAIRSPE*HFDPNW Trigger: CCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGAT...AGCCGGAGCTCTTGGTCTCAGTTTGCACAGTGGGTAGGGCTGGGGAGGGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | ATTGAGGTGCAGCCTTACCTCCTCGCCCAGGGAATGCATACCAACTaGTGGGAAGAGCCCATCTGGGGACATGGGCATGATGGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IEVQPYLLAQGMHTN*WEEPIWGHGHDGGA Trigger: GGCTCCACCATCATGCCCATGTCCCCAGATGGGCTCTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | TCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTGGTaGAGGTACATGACATTTCGGACGTTCCGGACAGCCCGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSSSSSSPSW*RYMTFRTFRTARAV Trigger: GACTGCCCGGGCTGTCCGGAACGTCCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | CGTGGTAGGCCACAGACCCTCTGCTCCAGCCAGGGTGTCTGTTCTTaGGATAATCCTTCCGGGCCAGCCCCAAGGCGATATAGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRPQTLCSSQGVCS*DNPSGPAPRRYSTS Trigger: AGAAGTGCTATATCGCCTTGGGGCTGGCCCGGAAGGATTATCCCAAGAACAGACACCCTGGCTGGAGCAGAGGGTCTGTGGCCTACCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | CCATCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTTCGGACGTTCCGGACAGCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSSSSSSSSSSPS*CRYMTFRTFRTARA Trigger: TGCCCGGGCTGTCCGGAACGTCCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | CTCCTCGCCCAGGGAATGCATACCAACTGCTGGGAAGAGCCCATCTaGGGACATGGGCATGATGGTGGAGCCCACCCGTTTCCCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQGMHTNCWEEPI*GHGHDGGAHPFPIF Trigger: AAAAATGGGAAACGGGTGGGCTCCACCATCATGCCCATGTCCCCAGATGGGCTCTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | GAGCCCACCCGTTTCCCATTTTTGGTGAAGAAGATCTGGGCAGTCTaGACATCAAAGGACACAGGCTCAATGCCACAGCCGATCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPTRFPFLVKKIWAV*TSKDTGSMPQPIRS Trigger: GGACCGGATCGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAAAAATGGGAAACGGGTGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 90 bp | CCATTCCGAGTGAAGAAGACCACCACCTTCTTGCCCTCATGCTCCTaGTCGATCTCTTCCCCATCCTCCTCTTCCTCCTCTTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFRVKKTTTFLPSCS*SISSPSSSSSSSSS Trigger: AGAGGAGGAAGAGGAGGAAGAGGAGGATGGGGAAGAGATCGAGCAGGAGCATGAGGGCAAGAAGGTGGTGGTCTTCTTCACTCGGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGACATCCACGATGCTCTaGCCCTTCCCCAAATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAALGKQPQYNTCPGALTSTML*PFPKYS Trigger: GGAGTATTTGGGGAAGGGCAAGAGCATCGTGGATGT...CAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTCTGGGCAAACAGCCACAATACAACACATGCCCCGGTGCCTTGGCTCACCCGTTTCCCATTTTaGGTGAAGAAGATCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLWANSHNTTHAPVPWLTRFPF*VKKIWA Trigger: TGCCCAGATCTTCTTCACCAAAAATGGGAAACGGGT...GAGCCAAGGCACCGGGGCATGTGTTGTATTGTGGCTGTTTGCCCAGAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 90 bp | ATGATGGTGGAGCCCACCCGTTTCCCATTTTTGGTGAAGAAGATCTaGGCAGTCTGCACATCAAAGGACACAGGCTCAATGCCACAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MMVEPTRFPFLVKKI*AVCTSKDTGSMPQP Trigger: CGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAAAAATGGGAAACGGGTGGGCTCCACCATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | AGGAGAGGGGATGAAGAGAATTCGGGGAGCTGTGGTAGACAGGGACAGACTGCCTTCTTCCCGATGATCTaGCCATTCCGAGTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRGDEENSGSCGRQGQTAFFPMI*PFRVKK Trigger: CTTCTTCACTCGGAATGGCAAGATCATCGGGAAGAA...GGCAGTCTGTCCCTGTCTACCACAGCTCCCCGAATTCTCTTCATCCCCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS-3UTR CAA 90 bp | GAAAACAATGGAGACCCTAGATGTGTTTTAGGACAGCAGCCAGTGAAAGGAGAGCCCTTGGCTCGGCCGTaGTACAGCTTGCCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ENNGDPRCVLGQQPVKGEPLARP*YSLPSS Trigger: TGATGATGGCAAGCTGTACAACGGCCGAGCCAAGGG...CTCTCCTTTCACTGGCTGCTGTCCTAAAACACATCTAGGGTCTCCATTGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 90 bp | AATTTCCATGGTAACTCAAAGTGTCACCATCTACAAGGATATGCTTaGACCTCTCCTGATATCGGAAGGCCCGGACCTCTCGGATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NFHGNSKCHHLQGYA*TSPDIGRPGPLGSP Trigger: GGGAGATCCGAGAGGTCCGGGCCTTCCGATATCAGGAGAGGTTCAAGCATATCCTTGTAGATGGTGACACTTTGAGTTACCATGGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | CAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTTaGACTTTGACCCGAACTGGCGCCCCTTGGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QAQCHSRSGPQS*TLTRTGAPWLG Trigger: GCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | CCGATCCGGTCCCCAGAGTTGCACTTTGACCCGAACTaGCGCCCCTTGGCTCGGCCGTTGTACAGCTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PIRSPELHFDPN*RPLARPLYSLP Trigger: TGGCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 72 bp | CAATGCCACAGCCGATCCGGTCCCCAGAGTTGCACTTaGACCCGAACTGGCGCCCCTTGGCTCGGCCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QCHSRSGPQSCT*TRTGAPWLGRC Trigger: ACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 72 bp | ACAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTaGCACTTTGACCCGAACTGGCGCCCCTTGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TGSMPQPIRSPE*HFDPNWRPLAR Trigger: CCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 90 bp | ACACAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTTGCACTTaGACCCGAACTGGCGCCCCTTGGCTCGGCCGTTGTACAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TQAQCHSRSGPQSCT*TRTGAPWLGRCTAC Trigger: GCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 72 bp | AATGCCACAGCCGATCCGGTCCCCAGAGTTGCACTTTaGCCCGAACTGGCGCCCCTTGGCTCGGCCGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: NATADPVPRVAL*PELAPLGSAVV Trigger: TACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 90 bp | TCAAAGGACACAGGCTCAATGCCACAGCCGATCCGGTCCCCAGAGTaGCACTTTGACCCGAACTGGCGCCCCTTGGCTCGGCCGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SKDTGSMPQPIRSPE*HFDPNWRPLARPLY Trigger: GTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGTGTCCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | ACGCTGTCATCCTCACGGCCCAGCTCGGCATTGAGGTaGAGCCTTACCTCCTCGCCCAGGGAATGCATACCA | + |
|
Preference number: 6 (lower is better) Translates to: TLSSSRPSSALR*SLTSSPRECIP Trigger: TGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAATGCCGAGCTGGGCCGTGAGGATGACAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | CTCCAGGATCCACAATCTCCACCTCAAAGTAATGGCTaGGGGTGCTCAGTGGGTGCCGAGCCTGAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQDPQSPPQSNG*GCSVGAEPEPA Trigger: GGCTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGCCATTACTTTGAGGTGGAGATTGTGGATCCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | TGTAGCAGCGTGGCCCAAAGGGGTCCCCCACACCACTaGCATGGAAGATCTTCCCGTCATCTGCGTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSVAQRGPPHH*HGRSSRHLRGR Trigger: CCTACCACGCAGATGACGGGAAGATCTTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | GCATTGAGGTGCAGCCTTACCTCCTCGCCCAGGGAATaGATACCAACTGCTGGGAAGAGCCCATCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALRCSLTSSPRE*IPTAGKSPSGD Trigger: GTCCCCAGATGGGCTCTTCCCAGCAGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | GATCCACAATCTCCACCTCAAAGTAATGGCTGCGGGTaGTCAGTGGGTGCCGAGCCTGAGCCAGCCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: DPQSPPQSNGCG*SVGAEPEPAPH Trigger: ATGTGGGGCTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGCCATTACTTTGAGGTGGAGATTGTGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | CCCCAGAGTTGCACTTTGACCCGAACTGGCGCCCCTTaGCTCGGCCGTTGTACAGCTTGCCATCATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PQSCTLTRTGAP*LGRCTACHHQH Trigger: ATGCTGATGATGGCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | AATCTCCACCTCAAAGTAATGGCTGCGGGTGCTCAGTaGGTGCCGAGCCTGAGCCAGCCCCACATCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: NLHLKVMAAGAQ*VPSLSQPHIHD Trigger: ATCGTGGATGTGGGGCTGGCTCAGGCTCGGCACCCACTGAGCACCCGCAGCCATTACTTTGAGGTGGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | CCACAGACCCTCTGCTCCAGCCAGGGTGTCTGTTCTTaGGATAATCCTTCCGGGCCAGCCCCAAGGCGATAT | + |
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Preference number: 6 (lower is better) Translates to: PQTLCSSQGVCS*DNPSGPAPRRY Trigger: ATATCGCCTTGGGGCTGGCCCGGAAGGATTATCCCAAGAACAGACACCCTGGCTGGAGCAGAGGGTCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 72 bp | TCCCCAGAGTTGCACTTTGACCCGAACTGGCGCCCCTaGGCTCGGCCGTTGTACAGCTTGCCATCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPELHFDPNWRP*ARPLYSLPSSA Trigger: TGCTGATGATGGCAAGCTGTACAACGGCCGAGCCAAGGGGCGCCAGTTCGGGTCAAAGTGCAACTCTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 90 bp | CTGTCCACCATCATGACGCTGTCATCCTCACGGCCCAGCTCGGCATaGAGGTGCAGCCTTACCTCCTCGCCCAGGGAATGCATACCAACT | + |
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Preference number: 6 (lower is better) Translates to: LSTIMTLSSSRPSSA*RCSLTSSPRECIPT Trigger: AGTTGGTATGCATTCCCTGGGCGAGGAGGTAAGGCTGCACCTCAATGCCGAGCTGGGCCGTGAGGATGACAGCGTCATGATGGTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | TCTGGGCAGTCTGCACATCAAAGGACACAGGCTCAATaGCACAGCCGATCCGGTCCCCAGAGTTGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGQSAHQRTQAQ*HSRSGPQSCTL Trigger: CAAAGTGCAACTCTGGGGACCGGATCGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACTGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | TCCTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTGGTaGAGGTACATGACATTTCGGACGTTCCGGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSPSW*RYMTFRTFRTA Trigger: GGCTGTCCGGAACGTCCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | GATTCCACAGCCCATAATGTCTCCTTTGTAGCAGCGTaGCCCAAAGGGGTCCCCCACACCACTGCCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: DSTAHNVSFVAA*PKGVPHTTAME Trigger: TTCCATGGCAGTGGTGTGGGGGACCCCTTTGGGCCACGCTGCTACAAAGGAGACATTATGGGCTGTGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 72 bp | GTGTCACCATCTACAAGGATATGCTTGAACCTCTCCTaGTATCGGAAGGCCCGGACCTCTCGGATCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VSPSTRICLNLS*YRKARTSRISR Trigger: TCGGGAGATCCGAGAGGTCCGGGCCTTCCGATATCAGGAGAGGTTCAAGCATATCCTTGTAGATGGTGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | TCTTCCTCCTCTTCCTCCTCTTCCTCTTCCCCTTCCTaGTGCAGGTACATGACATTTCGGACGTTCCGGACA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSSPS*CRYMTFRTFRT Trigger: TGTCCGGAACGTCCGAAATGTCATGTACCTGCACCAGGAAGGGGAAGAGGAAGAGGAGGAAGAGGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 72 bp | CCAGACGGCACAACAGCATCCTTCTTCCCGATGATCTaGCCATTCCGAGTGAAGAAGACCACCACCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: PDGTTASFFPMI*PFRVKKTTTFL Trigger: CAAGAAGGTGGTGGTCTTCTTCACTCGGAATGGCAAGATCATCGGGAAGAAGGATGCTGTTGTGCCGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 90 bp | AAGAAACCTCCAGACGGCACAACAGCATCCTTCTTCCCGATGATCTaGCCATTCCGAGTGAAGAAGACCACCACCTTCTTGCCCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: KKPPDGTTASFFPMI*PFRVKKTTTFLPSC Trigger: GCATGAGGGCAAGAAGGTGGTGGTCTTCTTCACTCGGAATGGCAAGATCATCGGGAAGAAGGATGCTGTTGTGCCGTCTGGAGGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS GCA 72 bp | CGTTTCCCATTTTTGGTGAAGAAGATCTGGGCAGTCTaGACATCAAAGGACACAGGCTCAATGCCACAGCCG | + |
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Preference number: 6 (lower is better) Translates to: RFPFLVKKIWAV*TSKDTGSMPQP Trigger: CGGCTGTGGCATTGAGCCTGTGTCCTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAAAAATGGGAAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CCA 72 bp | GAGCCCACCCGTTTCCCATTTTTGGTGAAGAAGATCTaGGCAGTCTGCACATCAAAGGACACAGGCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: EPTRFPFLVKKI*AVCTSKDTGSM Trigger: CATTGAGCCTGTGTCCTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAAAAATGGGAAACGGGTGGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS CAA 72 bp | ATGGGCATGATGGTGGAGCCCACCCGTTTCCCATTTTaGGTGAAGAAGATCTGGGCAGTCTGCACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: MGMMVEPTRFPF*VKKIWAVCTSK Trigger: CTTTGATGTGCAGACTGCCCAGATCTTCTTCACCAAAAATGGGAAACGGGTGGGCTCCACCATCATGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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| CDS TCA 72 bp | GGTAACTCAAAGTGTCACCATCTACAAGGATATGCTTaGACCTCTCCTGATATCGGAAGGCCCGGACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GNSKCHHLQGYA*TSPDIGRPGPL Trigger: GAGAGGTCCGGGCCTTCCGATATCAGGAGAGGTTCAAGCATATCCTTGTAGATGGTGACACTTTGAGTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154032.2 |
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