Pregenerated sensors for SPRY4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024427Ensembl transcript IDs: ENSMUST00000025295.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTACCCACTGGACGGGCTGCGCGTTCTGAGTCCTTTAGCACCGTaGGAGAAAGAGTTGCTACGTCTTTGGGGGCTGTTGGGAGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: TYPLDGLRVLSPLAP*EKELLRLWGLLGGV Trigger: CACCCCTCCCAACAGCCCCCAAAGACGTAGCAACTCTTTCTCTCACGGTGCTAAAGGACTCAGAACGCGCAGCCCGTCCAGTGGGTAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CCA 90 bp | CCACTGGGTCAGCTGTCCTGTGGATACAAATTGAGGGAGGGACCCTaGGTGAAGCTCCCAGGCTTCTTAGAAAGAGTGCACGTGTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: PLGQLSCGYKLREGP*VKLPGFLERVHVCA Trigger: AGCGCACACGTGCACTCTTTCTAAGAAGCCTGGGAGCTTCACCCAGGGTCCCTCCCTCAATTTGTATCCACAGGACAGCTGACCCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CCA 90 bp | ACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTaGATACAAATTGAGGGAGGGACCCTGGGTGAAGCTCCCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TKITKVQPATGSAVL*IQIEGGTLGEAPRL Trigger: AAGCCTGGGAGCTTCACCCAGGGTCCCTCCCTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | TCGGCTCAACTGTCATCCTGCCAATGGGAGGTACGGCCTCTTCTTTaGCATTCTCGATGTGCAGGGGAAACGCTCCTTGAGGTTGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SAQLSSCQWEVRPLL*HSRCAGETLLEVAY Trigger: GTAAGCAACCTCAAGGAGCGTTTCCCCTGCACATCGAGAATGGCAAAGAAGAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR TCA 90 bp | GTTCTGCCCCTGACCAACTTGGTATGTGTTGTTCCCTTGAGGCTGTaGTCCAGCTGGGCCCCATTGATGCAGAACTACACTAGCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: VLPLTNLVCVVPLRL*SSWAPLMQNYTSSK Trigger: CTTTGAGCTAGTGTAGTTCTGCATCAATGGGGCCCAGCTGGATCACAGCCTCAAGGGAACAACACATACCAAGTTGGTCAGGGGCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | CATAAATTGGGAAGCCGGGGAAGCCCCGGATGTTCAATTGTACAGTaGAAATGTGTGCTGCCCACACGCCTCCACTATTTCTTGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: HKLGSRGSPGCSIVQ*KCVLPTRLHYFLEQ Trigger: CTGCTCCAAGAAATAGTGGAGGCGTGTGGGCAGCACACATTTGCACTGTACAATTGAACATCCGGGGCTTCCCCGGCTTCCCAATTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | AGAATCACAAGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTaGCAATGGGAGGTACGGCCTCTTCTTTGCCATTCTCGATGTGCA | + |
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Preference number: 1 (lower is better) Translates to: RITRKPNPSSAQLSS*QWEVRPLLCHSRCA Trigger: TGCACATCGAGAATGGCAAAGAAGAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCTTGTGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | ATGTGCGCATACACGGCTTATATAGCTCAACTGTCCACAGACGTATaGAGACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: MCAYTAYIAQLSTDV*RPRSPKCNLPLGQL Trigger: CAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTCTGCATACGTCTGTGGACAGTTGAGCTATATAAGCCGTGTATGCGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | AAACAGCTACAGAAATGTTCTGTTTGTGAGAGCCTGTGTTCCCAATaGCTGTTGACTAACCTGGGAAGGGGAGGGGGCCCTATAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: KQLQKCSVCESLCSQ*LLTNLGRGGGPINK Trigger: TTTGTTTATAGGGCCCCCTCCCCTTCCCAGGTTAGTCAACAGGCATTGGGAACACAGGCTCTCACAAACAGAACATTTCTGTAGCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CCA 90 bp | TGGATCCAGAGACCACAGCCTCAGACTCATTGGCAAAATGATATTTaGTCTTGCTTGTGTCATCCTGGCCTTCTTAACCCAGCGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: WIQRPQPQTHWQNDI*SCLCHPGLLNPASF Trigger: GAAACTCGCTGGGTTAAGAAGGCCAGGATGACACAAGCAAGACCAAATATCATTTTGCCAATGAGTCTGAGGCTGTGGTCTCTGGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | CAGAGACCACAGCCTCAGACTCATTGGCAAAATGATATTTGGTCTTaGTTGTGTCATCCTGGCCTTCTTAACCCAGCGAGTTTCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: QRPQPQTHWQNDIWS*LCHPGLLNPASFYK Trigger: TTTGTAGAAACTCGCTGGGTTAAGAAGGCCAGGATGACACAAGCAAGACCAAATATCATTTTGCCAATGAGTCTGAGGCTGTGGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 90 bp | TTTGCTGATCGCAGGGGTTTGTCTTCTATCTTTCCTTCCGTTCTGTaGAAGAACACTGCAATGTGGCAAGGGCAGGTATATGTATGGATT | + |
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Preference number: 1 (lower is better) Translates to: FADRRGLSSIFPSVL*KNTAMWQGQVYVWI Trigger: AATCCATACATATACCTGCCCTTGCCACATTGCAGTGTTCTTGCACAGAACGGAAGGAAAGATAGAAGACAAACCCCTGCGATCAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 90 bp | ACCCACACAACAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTaGCATGCAACAAGTACCTACCCACTGGACGGGCTGCGCGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: THTTAGGKDQRHDSF*HATSTYPLDGLRVL Trigger: CAGAACGCGCAGCCCGTCCAGTGGGTAGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTGTTGTGTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTAGCCCAGGCACCTCCCGGAAGCCATCCTTaGCTCCAGGCACAACTGACA | + |
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Preference number: 2 (lower is better) Translates to: AYRRTSLSLQWYQVAQAPPGSHP*LQAQLT Trigger: TGTCAGTTGTGCCTGGAGCCAAGGATGGCTTCCGGG...AGGTGCCTGGGCTACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 90 bp | CCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAATaGAGGGAGGGACCCTGGGTGAAGCTCCCAGGCTTCTTAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PKCNLPLGQLSCGYK*REGPWVKLPGFLER Trigger: TCTTTCTAAGAAGCCTGGGAGCTTCACCCAGGGTCCCTCCCTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTAGCCCAGGCACCTAGGCCATTGAGTGGCTaGACTTGCAGACCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AYRRTSLSLQWYQVAQAPRPLSG*TCRPCV Trigger: GACACAGGGTCTGCAAGTTCAGCCACTCAATGGCCT...AGGTGCCTGGGCTACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGGAAACACAGGATCGACATCCACCATTACAGAGCGGGGAAGGGCACGGAGAATGATGGGTACCTaGCTGGTTCTGCCCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: QNGNTGSTSTITERGRARRMMGT*LVLPLT Trigger: GGTCAGGGGCAGAACCAGGCAGGTACCCATCATTCT...CCGTGCCCTTCCCCGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTAGCCCAGGCACCTGGGAAGGCCATTGAGTaGCTGAACTTGCAGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: AYRRTSLSLQWYQVAQAPGKAIE*LNLQTL Trigger: CAGGGTCTGCAAGTTCAGCCACTCAATGGCCTTCCC...AGGTGCCTGGGCTACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGGAAACACAGGATCGACATCCACCATTACAGAGCGGGGAAGGGCACGGTGTGCACACAAAAAGTaGGGCTCAAACCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QNGNTGSTSTITERGRARCAHKK*GSNPAA Trigger: GGCTGCTGGGTTTGAGCCCCACTTTTTGTGTGCACA...CCGTGCCCTTCCCCGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTACCTGAACACACTGCCAGGTaGTTCCTTCTCCATCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QLGARTRDTIAFCMQQVPEHTAR*FLLHPA Trigger: AGCAGGATGGAGAAGGAACCACCTGGCAGTGTGTTC...AGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCCCAGAGTGCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTCACAAAGTCAGGGTTTaGGAAGGGTTGCCAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QPPECLQENQPFPTMVPSHKVRV*EGLPGN Trigger: GTTTCCTGGCAACCCTTCCCAAACCCTGACTTTGTG...ACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCAGAATCACAAGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTGCTTACCCCCAGATTTTaGAATCAGCCCTTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KQQNHKKTQPQFGSTVILLTPRF*NQPFLG Trigger: CCCCAGGAAGGGCTGATTTCAAAATCTGGGGGTAAG...CAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCTTGTGATTCTGCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAGTTCCCAATGCCTGTTaGCTAACCTGGGAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTSWHFGSDVNSSQAKAAVPNAC*LTWEGE Trigger: CTCCCCTTCCCAGGTTAGTCAACAGGCATTGGGAAC...TGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAAGTGTCACGTGTGCATGTGCGCATACACGGCTTATATAGCTCAACTGTCCGTTCCTTCTCCATCCTaGTACTCACGGGAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CKCHVCMCAYTAYIAQLSVPSPS*YSREAA Trigger: TGCTGCCTCCCGTGAGTAGCAGGATGGAGAAGGAAC...GGACAGTTGAGCTATATAAGCCGTGTATGCGCACATGCACACGTGACACTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | AACCCAACCCCAGTTCGGCTCAACTGTCATCCTGCCAATGGGAGGTACGGCCTCAATGATATTTGGTCTTaGTTGTGTCATCCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: NPTPVRLNCHPANGRYGLNDIWS*LCHPGL Trigger: AAGGCCAGGATGACACAAGCAAGACCAAATATCATT...GAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGAACTGGGGTTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCCCAGAGTGCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTCTGTCCACAGACGTATaGAGACCAAGATCACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPPECLQENQPFPTMVPSLSTDV*RPRSPK Trigger: CTTTGGTGATCTTGGTCTGCATACGTCTGTGGACAG...ACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAACATCTTCATCCTTTTaGGGACTCAAGGCTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DQDHQSATCHWVSCPVDTTSSSF*GLKARQ Trigger: CTGCCTAGCCTTGAGTCCCCAAAAGGATGAAGATGT...TGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 90 bp | CTACAGAAATGTTCTGTTTGTGAGAGCCTGTGTTCCCAATGCCTGTaGACTAACCTGGGAAGGGGAGGGGGCCCTATAAACAAACTACCC | + |
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Preference number: 2 (lower is better) Translates to: LQKCSVCESLCSQCL*TNLGRGGGPINKLP Trigger: GGGTAGTTTGTTTATAGGGCCCCCTCCCCTTCCCAGGTTAGTCAACAGGCATTGGGAACACAGGCTCTCACAAACAGAACATTTCTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTATTAGGAGAGGACAGATaGGCAAGGTCAGTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQLGARTRDTIAFCMQQVLGEDR*ARSVSG Trigger: TCCTGAGACTGACCTTGCTCATCTGTCCTCTCCTAA...TACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATGGCTGGGAAGGCCATTaGGTGGCTGAACTTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHGWEGH*VAELAD Trigger: GTCTGCAAGTTCAGCCACTCAATGGCCTTCCCAGCC...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAACCACTTACAGCTACCTaGCTCCTTGCCTCCTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQPLTAT*LLASSL Trigger: TAGGGAGGAGGCAAGGAGTCAGGTAGCTGTAAGTGG...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCAAGAAGTCAGAAACAGCTACAGAAATGTTCTGTTTGTGAGAGCCTGTAGCCCTTCCTGGGGGTaGCCCAAAAGGAAGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASQEVRNSYRNVLFVRACSPSWG*PKRKQG Trigger: ACCTTGCTTCCTTTTGGGCCACCCCCAGGAAGGGCT...ACAGGCTCTCACAAACAGAACATTTCTGTAGCTGTTTCTGACTTCTTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAAGAAATCAGCCCTTCCTaGGGGTGGCCCAAAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQEISPS*GWPKRK Trigger: CTTCCTTTTGGGCCACCCCCAGGAAGGGCTGATTTC...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACAGTGCAACCTGCCACTaGGTCAGCTGTCCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYSATCH*VSCPVD Trigger: ATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACT...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCACTGTCTTCCGTCTTCTaGAATAGGAAAACTGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTSWHFGSDVNSSQAKAALSSVF*NRKTGP Trigger: GGGCCCAGTTTTCCTATTTCAGAAGACGGAAGACAG...TGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATCCAGCTGGGCCCCATTaGTGCAGAACTACACTAGCT | + |
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Preference number: 2 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHPAGPH*CRTTLA Trigger: AGCTAGTGTAGTTCTGCATCAATGGGGCCCAGCTGG...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATCAGGAATGGCTACGGTaGACCTTCCCAAGAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHQEWLR*TFPRGQ Trigger: TTGGCCTCTTGGGAAGGTGCACCGTAGCCATTCCTG...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACGGGTGTCTGTGTGTGTaGACACAAAAAGTGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYGCLCV*TQKVGL Trigger: GAGCCCCACTTTTTGTGTGCACACACACAGACACCC...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCAACTTCTGTGGGGAGGAAGAATTCTGTAGACATCATTTCCAAACCAGAGTCTTTGGGGGCTGTTaGGAGGGGTGTCTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KVNFCGEEEFCRHHFQTRVFGGC*EGCLCV Trigger: CACACACAGACACCCCTCCCAACAGCCCCCAAAGAC...TCTGGTTTGGAAATGATGTCTACAGAATTCTTCCTCCCCACAGAAGTTGACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCAACTTCTGTGGGGAGGAAGAATTCTGTAGACATCATTTCCAAACCAGAGAGTTGCTACGTCTTTaGGGGCTGTTGGGAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KVNFCGEEEFCRHHFQTRELLRL*GLLGGV Trigger: CACCCCTCCCAACAGCCCCCAAAGACGTAGCAACTC...TCTGGTTTGGAAATGATGTCTACAGAATTCTTCCTCCCCACAGAAGTTGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACCTGGGGTACCTCTTCTaGCCCAGGCTATTTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYLGYLF*PRLFLE Trigger: TTCAAGAAATAGCCTGGGTCAGAAGAGGTACCCCAG...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGGAAACACAGGATCGACATCCACCATTACAGAGCGGGGAAGGGCACGGCATATAAAAACATCATaGCTGGATCCAGAGACCACA | + |
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Preference number: 2 (lower is better) Translates to: QNGNTGSTSTITERGRARHIKTS*LDPETT Trigger: TGTGGTCTCTGGATCCAGCCATGATGTTTTTATATG...CCGTGCCCTTCCCCGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAACCCCAAGTTAGTGATTaGAAGCTAGGAGGAACACAC | + |
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Preference number: 2 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQPQVSD*KLGGTH Trigger: GTGTGTTCCTCCTAGCTTTCAATCACTAACTTGGGG...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | ATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAATTGAGGACTCATTGGCAAAATaGTATTTGGTCTTGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: ITKVQPATGSAVLWIQIEDSLAK*YLVLLV Trigger: CACAAGCAAGACCAAATATCATTTTGCCAATGAGTC...CTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCCAAGAAGTCAGAAACAGCTACAGAAATGTTCTGTTTGTGAGAGCCTGTTTACCACTGAGCAAGTaGGTCCCAAGGTCAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: ASQEVRNSYRNVLFVRACLPLSK*VPRSTS Trigger: AGAAGTTGACCTTGGGACTCACTTGCTCAGTGGTAA...ACAGGCTCTCACAAACAGAACATTTCTGTAGCTGTTTCTGACTTCTTGGCTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCAGAATCACAAGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTGCAGCCTCAGACTCATTaGCAAAATGATATTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KQQNHKKTQPQFGSTVILQPQTH*QNDIWS Trigger: AGACCAAATATCATTTTGCCAATGAGTCTGAGGCTG...CAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCTTGTGATTCTGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAGCAGAATCACAAGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTGAAAGTTTCAAGACTGTaGAAATCCCCAAAGTACATC | + |
|
Preference number: 2 (lower is better) Translates to: KQQNHKKTQPQFGSTVILKVSRL*KSPKYI Trigger: GATGTACTTTGGGGATTTTCACAGTCTTGAAACTTT...CAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCTTGTGATTCTGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTTCTCGGACATCAAGTaGATACAGCAGGAATGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHFSDIK*IQQEWL Trigger: TAGCCATTCCTGCTGTATGCACTTGATGTCCGAGAA...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAATTGAGTGGCAAAATGATATTTaGTCTTGCTTGTGTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: ITKVQPATGSAVLWIQIEWQNDI*SCLCHP Trigger: AGGATGACACAAGCAAGACCAAATATCATTTTGCCA...CTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTAGCCAAGAAGTCAGAAACAGCTACAGAAATGTTCTGTTTGTGAGAGCCTGTGACACGATAGCTTTTTaGATGCAACAAGTACCTACC | + |
|
Preference number: 2 (lower is better) Translates to: ASQEVRNSYRNVLFVRACDTIAF*MQQVPT Trigger: GGTAGGTACTTGTTGCATGCAAAAAGCTATCGTGTC...ACAGGCTCTCACAAACAGAACATTTCTGTAGCTGTTTCTGACTTCTTGGCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAGCTCCACATGATTTTTaGCTAATGCTCTCTCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: GTSWHFGSDVNSSQAKAAAPHDF*LMLSQF Trigger: AAATTGAGAGAGCATTAGGCAAAAATCATGTGGAGC...TGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR TCA 72 bp | GAGGAAGCAGAGGGGCTGGGAAGGCCATTGAGTGGCTaGACTTGCAGACCCTGTGTCCGCATCTGTCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: EEAEGLGRPLSG*TCRPCVRICLP Trigger: CGGAAGACAGATGCGGACACAGGGTCTGCAAGTTCAGCCACTCAATGGCCTTCCCAGCCCCTCTGCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | GAGGGGGAGCTACAGAGACACAGGAATGTGGTGGAGTaGGGTGCTGGGCACAGCTCTAGTGCTGCTAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: EGELQRHRNVVE*GAGHSSSAANR Trigger: CCTGTTAGCAGCACTAGAGCTGTGCCCAGCACCCCACTCCACCACATTCCTGTGTCTCTGTAGCTCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | GGAGGAACACACTGCCAGGTGGTTCCTTCTCCATCCTaGTACTCACGGGAGGCAGCAGCTTACCGGCGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GGTHCQVVPSPS*YSREAAAYRRF Trigger: AAATCGCCGGTAAGCTGCTGCCTCCCGTGAGTAGCAGGATGGAGAAGGAACCACCTGGCAGTGTGTTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR TCA 72 bp | CTGGACGGGCTGCGCGTTCTGAGTCCTTTAGCACCGTaGGAGAAAGAGTTGCTACGTCTTTGGGGGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LDGLRVLSPLAP*EKELLRLWGLL Trigger: CAACAGCCCCCAAAGACGTAGCAACTCTTTCTCTCACGGTGCTAAAGGACTCAGAACGCGCAGCCCGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | TCGGACATCAAGTGCATACAGCAGGAATGGCTACGGTaGACCTTCCCAAGAGGCCAAGGCCAACAGGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SDIKCIQQEWLR*TFPRGQGQQAW Trigger: CCATGCCTGTTGGCCTTGGCCTCTTGGGAAGGTGCACCGTAGCCATTCCTGCTGTATGCACTTGATGTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | CAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTaGATGCAACAAGTACCTACCCACTGGACGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QLGARTRDTIAF*MQQVPTHWTGC Trigger: GCAGCCCGTCCAGTGGGTAGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | CTGTCATCCTGCCAATGGGAGGTACGGCCTCTTCTTTaGCATTCTCGATGTGCAGGGGAAACGCTCCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSCQWEVRPLL*HSRCAGETLLE Trigger: CTCAAGGAGCGTTTCCCCTGCACATCGAGAATGGCAAAGAAGAGGCCGTACCTCCCATTGGCAGGATGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | GGAAGCCGGGGAAGCCCCGGATGTTCAATTGTACAGTaGAAATGTGTGCTGCCCACACGCCTCCACTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSRGSPGCSIVQ*KCVLPTRLHYF Trigger: GAAATAGTGGAGGCGTGTGGGCAGCACACATTTGCACTGTACAATTGAACATCCGGGGCTTCCCCGGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | ACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTaGATACAAATTGAGGGAGGGACCCTGGGTGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TKVQPATGSAVL*IQIEGGTLGEA Trigger: AGCTTCACCCAGGGTCCCTCCCTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | CAGAAATGTTCTGTTTGTGAGAGCCTGTGTTCCCAATaGCTGTTGACTAACCTGGGAAGGGGAGGGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QKCSVCESLCSQ*LLTNLGRGGGP Trigger: AGGGCCCCCTCCCCTTCCCAGGTTAGTCAACAGGCATTGGGAACACAGGCTCTCACAAACAGAACATTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | CTCCACTATTTCTTGGAGCAGCACTGGAGACCAAGCTaGTCTAGAATGATGGGTACCTGCCTGGTTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHYFLEQHWRPS*SRMMGTCLVLP Trigger: GGGCAGAACCAGGCAGGTACCCATCATTCTAGAGCAGCTTGGTCTCCAGTGCTGCTCCAAGAAATAGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | CAGCTGTCCTGTGGATACAAATTGAGGGAGGGACCCTaGGTGAAGCTCCCAGGCTTCTTAGAAAGAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QLSCGYKLREGP*VKLPGFLERVH Trigger: GTGCACTCTTTCTAAGAAGCCTGGGAGCTTCACCCAGGGTCCCTCCCTCAATTTGTATCCACAGGACAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | GGGAAGGGCACGGAGCTACTCACCAAATGCATAAATTaGGAAGCCGGGGAAGCCCCGGATGTTCAATTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GKGTELLTKCIN*EAGEAPDVQLY Trigger: GTACAATTGAACATCCGGGGCTTCCCCGGCTTCCCAATTTATGCATTTGGTGAGTAGCTCCGTGCCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCCCAGAGTGCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTGCTTACCCCCAGATTTaGAAATCAGCCCTTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPPECLQENQPFPTMVPSAYPQI*KSALPG Trigger: CCCAGGAAGGGCTGATTTCAAAATCTGGGGGTAAGC...ACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTGTCACGTGTGCATGTGCGCATACACGGCTTATATAGCTCAACTGTCCCGTCTTTGGGGGCTGTaGGGAGGGGTGTCTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CKCHVCMCAYTAYIAQLSRLWGL*GGVSVC Trigger: ACACACAGACACCCCTCCCAACAGCCCCCAAAGACG...GGACAGTTGAGCTATATAAGCCGTGTATGCGCACATGCACACGTGACACTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | AGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTaGCAATGGGAGGTACGGCCTCTTCTTTGCCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKPNPSSAQLSS*QWEVRPLLCHS Trigger: AGAATGGCAAAGAAGAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR GCA 72 bp | CACTGGAGACCAAGCTGCTCTAGAATGATGGGTACCTaGCTGGTTCTGCCCCTGACCAACTTGGTATGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWRPSCSRMMGT*LVLPLTNLVCV Trigger: AACACATACCAAGTTGGTCAGGGGCAGAACCAGGCAGGTACCCATCATTCTAGAGCAGCTTGGTCTCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAATTGAGGACCCAGGCTATTTCTaGAATCAGAGGCAGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ITKVQPATGSAVLWIQIEDPGYF*NQRQGW Trigger: CCATCCCTGCCTCTGATTCAAGAAATAGCCTGGGTC...CTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 72 bp | TACAGCTACCTGACTCCTTGCCTCCTCCCTAGGGGCTaGTCACACAAAAGAACCAGAAATGCTCCACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: YSYLTPCLLPRG*SHKRTRNAPHD Trigger: ATCATGTGGAGCATTTCTGGTTCTTTTGTGTGAGCAGCCCCTAGGGAGGAGGCAAGGAGTCAGGTAGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATAGAGTTGCTACGTCTTaGGGGGCTGTTGGGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHRVATS*GAVGRG Trigger: ACCCCTCCCAACAGCCCCCAAAGACGTAGCAACTCT...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACAGGGTTTGGGAAGGGTaGCCAGGAAACAGGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYRVWEG*PGNRVC Trigger: ACAGACCCTGTTTCCTGGCAACCCTTCCCAAACCCT...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACCTTCCTCGAGGTATCTaGCCTCCCATTAGCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYLPRGI*PPISCS Trigger: GGAACAGCTAATGGGAGGCAAGATACCTCGAGGAAG...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTACCTGATATTTGGTCTTGCTaGTGTCATCCTGGCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLGARTRDTIAFCMQQVPDIWSC*CHPGLL Trigger: AAGAAGGCCAGGATGACACAAGCAAGACCAAATATC...AGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 72 bp | CGCAGGGGTTTGTCTTCTATCTTTCCTTCCGTTCTGTaGAAGAACACTGCAATGTGGCAAGGGCAGGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: RRGLSSIFPSVL*KNTAMWQGQVY Trigger: ATATACCTGCCCTTGCCACATTGCAGTGTTCTTGCACAGAACGGAAGGAAAGATAGAAGACAAACCCCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 72 bp | TACACGGCTTATATAGCTCAACTGTCCACAGACGTATaGAGACCAAGATCACCAAAGTGCAACCTGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: YTAYIAQLSTDV*RPRSPKCNLPL Trigger: CAGTGGCAGGTTGCACTTTGGTGATCTTGGTCTGCATACGTCTGTGGACAGTTGAGCTATATAAGCCGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | ATCCGTGTTTACAGCTATGTACACAAAGTCAGGGTTTaGGAAGGGTTGCCAGGAAACAGGGTCTGTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IRVYSYVHKVRV*EGLPGNRVCVV Trigger: TACCACACAGACCCTGTTTCCTGGCAACCCTTCCCAAACCCTGACTTTGTGTACATAGCTGTAAACACGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR TCA 72 bp | CTAATGCTCTCTCAATTTTACCTGGGGTACCTCTTCTaGCCCAGGCTATTTCTTGAATCAGAGGCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LMLSQFYLGYLF*PRLFLESEAGM Trigger: CATCCCTGCCTCTGATTCAAGAAATAGCCTGGGTCAGAAGAGGTACCCCAGGTAAAATTGAGAGAGCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR GCA 72 bp | CAGCCTCAGACTCATTGGCAAAATGATATTTGGTCTTaGTTGTGTCATCCTGGCCTTCTTAACCCAGCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPQTHWQNDIWS*LCHPGLLNPAS Trigger: ACTCGCTGGGTTAAGAAGGCCAGGATGACACAAGCAAGACCAAATATCATTTTGCCAATGAGTCTGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CCA 72 bp | AGACCACAGCCTCAGACTCATTGGCAAAATGATATTTaGTCTTGCTTGTGTCATCCTGGCCTTCTTAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPQPQTHWQNDI*SCLCHPGLLNP Trigger: TGGGTTAAGAAGGCCAGGATGACACAAGCAAGACCAAATATCATTTTGCCAATGAGTCTGAGGCTGTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CCA 72 bp | CAAGCTAAGAAACAGCACAGTCACCCACAATCAAAATaGAAACACAGGATCGACATCCACCATTACAGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: QAKKQHSHPQSK*KHRIDIHHYRA Trigger: CGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTTCTTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACATCCCCTATGTGTGTTaGCCAAGAAGTCAGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYIPYVC*PRSQRK Trigger: TTTTCTCTGACTTCTTGGCAAACACACATAGGGGAT...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATAGACACGATAGCTTTTaGCATGCAACAAGTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHRHDSF*HATSTY Trigger: GTAGGTACTTGTTGCATGCAAAAAGCTATCGTGTCT...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CCA 72 bp | ATCTTTCCTTCCGTTCTGTGCAAGAACACTGCAATGTaGCAAGGGCAGGTATATGTATGGATTAGTTATAGA | + |
|
Preference number: 3 (lower is better) Translates to: IFPSVLCKNTAM*QGQVYVWISYR Trigger: TCTATAACTAATCCATACATATACCTGCCCTTGCCACATTGCAGTGTTCTTGCACAGAACGGAAGGAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR TCA 72 bp | ACACTGTCACTGCTGTTTAACAAAGTTTCAAGACTGTaGAAATCCCCAAAGTACATCTTCATCCTTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLSLLFNKVSRL*KSPKYIFILLG Trigger: CCCCAAAAGGATGAAGATGTACTTTGGGGATTTTCACAGTCTTGAAACTTTGTTAAACAGCAGTGACAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | GGGCTCAAACCCAGCAGCCCCTGGAGGATCGTTCCCCACCTTCTCTGGCATCTTAGGAGCCAGCTCTGGTaGCCCGCCCCGGGGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKPSSPWRIVPHLLWHLRSQLW*PAPGPL Trigger: AAGCGGCCCCGGGGCGGGCCACCAGAGCTGGCTCCT...AAGATGCCAGAGAAGGTGGGGAACGATCCTCCAGGGGCTGCTGGGTTTGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAACCCCAGTTCGGCTCAACTGTCATCCTGCCAATGGGAGGTACGGCCTCGGAGGCGCACAGCCCTaGGTGAGGCCTGCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPTPVRLNCHPANGRYGLGGAQP*VRPAQP Trigger: TGGCTGAGCAGGCCTCACCCAGGGCTGTGCGCCTCC...GAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGAACTGGGGTTGGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGGAAACACAGGATCGACATCCACCATTACAGAGCGGGGAAGGGCACGGTGTAGGAGCCAGCTCTaGTGGCCCGCCCCGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QNGNTGSTSTITERGRARCRSQL*WPAPGP Trigger: CGGCCCCGGGGCGGGCCACCAGAGCTGGCTCCTACA...CCGTGCCCTTCCCCGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCCAGAGTGCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTGCCCTGGGTGAGGCCTaGTCAGCCACGGGCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPPECLQENQPFPTMVPSALGEA*SATGGG Trigger: TCCACCGCCCGTGGCTGAGCAGGCCTCACCCAGGGC...ACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCAAACCCAGCAGCCCCTGGAGGATCGTTCCCCACCTTCTCTGGCATCTTATGACGCTGTTCGTGTaGTTGCAGCGGCAACCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKPSSPWRIVPHLLWHLMTLFV*LQRQPG Trigger: CCCCGGTTGCCGCTGCAAGCACACGAACAGCGTCAT...AAGATGCCAGAGAAGGTGGGGAACGATCCTCCAGGGGCTGCTGGGTTTGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCAAACCCAGCAGCCCCTGGAGGATCGTTCCCCACCTTCTCTGGCATCTTGGTGTCCCCACTGGCTaGCTTGCAGATGACGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKPSSPWRIVPHLLWHLGVPTG*LADDAV Trigger: AACAGCGTCATCTGCAAGGCAGCCAGTGGGGACACC...AAGATGCCAGAGAAGGTGGGGAACGATCCTCCAGGGGCTGCTGGGTTTGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | ATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAATTGAGCAGAGAGGGCGCCCATaGAGGACCAGCGGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITKVQPATGSAVLWIQIEQRGRP*RTSGRS Trigger: GCTGCGCCCGCTGGTCCTTCATGGGCGCCCTCTCTG...CTCAATTTGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTTTAGCACCGTGAGAGAAAGAGTTGCTACGTCTTTGGGGGCTGTTGGGTGCTGGAGCCGGCTGTaGGGCGCTCTGCTGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESFSTVRERVATSLGAVGCWSRL*GALLSR Trigger: CCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCA...CCCAACAGCCCCCAAAGACGTAGCAACTCTTTCTCTCACGGTGCTAAAGGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CCA 90 bp | GACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAGAACAGGAGCAGGGGTaGTCGGCGCAAGAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQDHQSATCHWVSCPVDTEQEQG*SAQEPS Trigger: TGAGGGCTCTTGCGCCGACCACCCCTGCTCCTGTTC...TGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCTTCTCTGGCATCTTCCGACTTCCCCACCAGGGCTTCTTAACACTAAAAAGCGGGCGCAGCAGTTaGAGCCGGAACAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTFSGIFRLPHQGFLTLKSGRSS*SRNRSR Trigger: CCTGCTCCTGTTCCGGCTCCAACTGCTGCGCCCGCT...TTTTAGTGTTAAGAAGCCCTGGTGGGGAAGTCGGAAGATGCCAGAGAAGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CAA 72 bp | AGCAGAGGGGCTGGGAAGGCCATTGAGTGGCTGAACTaGCAGACCCTGTGTCCGCATCTGTCTTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGAGKAIEWLN*QTLCPHLSSVF Trigger: GAAGACGGAAGACAGATGCGGACACAGGGTCTGCAAGTTCAGCCACTCAATGGCCTTCCCAGCCCCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | GCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTAGCCCAGGCACCTCAATGGGTAAGATGGTaGGTGGGTGCTGGAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AYRRTSLSLQWYQVAQAPQWVRW*VGAGAG Trigger: GCCGGCTCCAGCACCCACTCACCATCTTACCCATTG...AGGTGCCTGGGCTACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAACTCGCTGGGCCAGCTTaGCGCAGCCTGTGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQLAGPA*RSLWPA Trigger: TGCCGGCCACAGGCTGCGTCAAGCTGGCCCAGCGAG...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR GCA 90 bp | CAACAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTACGCTGTTCGTGTGCTTaGAGCGGCAACCGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQLGARTRDTIAFCMQQVRCSCA*SGNRGV Trigger: GACGCCCCGGTTGCCGCTGCAAGCACACGAACAGCG...TACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCCCAGAGTGCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTTACAGTGAACCACCTTaGGCTGGAGGCGCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPECLQENQPFPTMVPSYSEPP*AGGAQP Trigger: GGGCTGTGCGCCTCCAGCCCAAGGTGGTTCACTGTA...ACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | GCTTACAGGAGAACCAGCCTTTCCCTACAATGGTACCAAGTAGCCCAGGCACCTCTGTCAAGGAGGGGCTaGACCATGACTGAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYRRTSLSLQWYQVAQAPLSRRG*TMTELG Trigger: TCCCAGCTCAGTCATGGTGCAGCCCCTCCTTGACAG...AGGTGCCTGGGCTACTTGGTACCATTGTAGGGAAAGGCTGGTTCTCCTGTAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CAA 72 bp | AGAAGTCAAGGCTCGGAGGGTCTTCCTCGAGGTATCTaGCCTCCCATTAGCTGTTCCTCCCAGGTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQGSEGLPRGI*PPISCSSQVEG Trigger: GCCTTCTACCTGGGAGGAACAGCTAATGGGAGGCAAGATACCTCGAGGAAGACCCTCCGAGCCTTGACTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CAA 72 bp | ACAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTaGCATGCAACAAGTACCTACCCACTGGACGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAGGKDQRHDSF*HATSTYPLDGL Trigger: CAGCCCGTCCAGTGGGTAGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTACCTTGCATGTGCCATAGTTaGCCAGCGTCTGAGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLGARTRDTIAFCMQQVPCMCHS*PASEPS Trigger: GCTCGGCTCAGACGCTGGTCAACTATGGCACATGCA...AGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | GACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACAAGGAAGTGCTGCTACTaGTGCTTACAGAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DQDHQSATCHWVSCPVDTRKCCY*CLQSWA Trigger: GGCCCAGCTCTGTAAGCAGCAGTAGCAGCACTTCCT...TGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CAA 72 bp | CTGCTACTCACGGGAGGCAGCAGCTTACCGGCGATTTaGTTCTCGGACATCAAGTGCATACAGCAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGGSSLPAI*FSDIKCIQQEW Trigger: CCATTCCTGCTGTATGCACTTGATGTCCGAGAACAAAATCGCCGGTAAGCTGCTGCCTCCCGTGAGTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTATGGCTGCCTTGCAGATaGCGCTGTTCGTGTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQLGARTRDTIAFCMQQVWLPCR*RCSCAC Trigger: GCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCA...TACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGTCACGTGTGCATGTGCGCATACACGGCTTATATAGCTCAACTGTCCGATTCACAGGGACGCTaGTCTGTGGAACCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKCHVCMCAYTAYIAQLSDSQGR*SVEPGA Trigger: AGCCCCCGGTTCCACAGAGCAGCGTCCCTGTGAATC...GGACAGTTGAGCTATATAAGCCGTGTATGCGCACATGCACACGTGACACTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | GGAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCACAGACCTGCTGGTCTTaGTGTCCCCACTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSWHFGSDVNSSQAKAAQTCWS*CPHWLP Trigger: AGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTG...TGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| 3UTR CAA 72 bp | TGTTCTGTTTGTGAGAGCCTGTGTTCCCAATGCCTGTaGACTAACCTGGGAAGGGGAGGGGGCCCTATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVCESLCSQCL*TNLGRGGGPIN Trigger: GTTTATAGGGCCCCCTCCCCTTCCCAGGTTAGTCAACAGGCATTGGGAACACAGGCTCTCACAAACAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR TCA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAAGGAGGGGCTGCACCATaGCTGAGCTGGGATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQGGAAP*LSWDSQ Trigger: CTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCC...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATGGCGGTGGAGCCATGTaGTCTAGGAGCCTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KQHSHPQSKWKHRIDIHHGGGAM*SRSLWS Trigger: CGACCAGAGGCTCCTAGATCACATGGCTCCACCGCC...ATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACTCCAGCGGCTTACAGTaGACCACCTTGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYSSGLQ*TTLGWR Trigger: CCTCCAGCCCAAGGTGGTTCACTGTAAGCCGCTGGA...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTTTAGCACCGTGAGAGAAAGAGTTGCTACGTCTTTGGGGGCTGTTGGGTCACACAGCAAGAAGTaGTTGTCTAGCTCTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESFSTVRERVATSLGAVGSHSKK*LSSSGG Trigger: TCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGA...CCCAACAGCCCCCAAAGACGTAGCAACTCTTTCTCTCACGGTGCTAAAGGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCAGAATCACAAGAAAACCCAACCCCAGTTCGGCTCAACTGTCATCCTGAAGGCTTGTCAGACCTaGTGGTCTTGGTGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQQNHKKTQPQFGSTVILKACQT*WSWCPH Trigger: GTGGGGACACCAAGACCAGCAGGTCTGACAAGCCTT...CAGGATGACAGTTGAGCCGAACTGGGGTTGGGTTTTCTTGTGATTCTGCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | CAAAATGGAAACACAGGATCGACATCCACCATTACAGAGCGGGGAAGGGCACGGCATTCTCCACGTGGCTaGTCTTCATCTGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QNGNTGSTSTITERGRARHSPRG*SSSGQW Trigger: CCATTGACCAGATGAAGACCAGCCACGTGGAGAATG...CCGTGCCCTTCCCCGCTCTGTAATGGTGGATGTCGATCCTGTGTTTCCATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR GCA 90 bp | GGAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAAAGTGCTGCTACTGCTaGTTACAGAGCTGGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSWHFGSDVNSSQAKAAKCCYC*LQSWAD Trigger: GTCGGCCCAGCTCTGTAAGCAGCAGTAGCAGCACTT...TGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 72 bp | TACAGCTATGTACACAAAGTCAGGGTTTGGGAAGGGTaGCCAGGAAACAGGGTCTGTGTGGTAGAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSYVHKVRVWEG*PGNRVCVVEGL Trigger: CAGACCCTCTACCACACAGACCCTGTTTCCTGGCAACCCTTCCCAAACCCTGACTTTGTGTACATAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 72 bp | CTGAGAAAGGCCGCTCGTTGCTCTCTTCCAGTTGGCTaGAGGAGCATTGATGGTACCTTGGAAGATGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAARCSLPVG*RSIDGTLEDVA Trigger: AGCAACATCTTCCAAGGTACCATCAATGCTCCTCAAGCCAACTGGAAGAGAGCAACGAGCGGCCTTTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGGGGCAAGGACCAGAGACACGATAGCTTTTTGCATGCAACAAGTACCTAAGGAGATCCAGTGGTaGGTAATATCCTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLGARTRDTIAFCMQQVPKEIQW*VISWSQ Trigger: CTGTGACCAGGATATTACTCACCACTGGATCTCCTT...AGGTACTTGTTGCATGCAAAAAGCTATCGTGTCTCTGGTCCTTGCCCCCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | GCTAGCCAAGAAGTCAGAAACAGCTACAGAAATGTTCTGTTTGTGAGAGCCTGTGAGCACAGGCACTCCTaGTTGCAGACCCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASQEVRNSYRNVLFVRACEHRHS*LQTQQE Trigger: TTCCTGCTGGGTCTGCAACCAGGAGTGCCTGTGCTC...ACAGGCTCTCACAAACAGAACATTTCTGTAGCTGTTTCTGACTTCTTGGCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| 3UTR CAA 72 bp | TCTCTTCCAGTTGGCTTGAGGAGCATTGATGGTACCTaGGAAGATGTTGCTAGCCTAAACTCAGCCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVGLRSIDGT*EDVASLNSAPR Trigger: TCTGGGGGCTGAGTTTAGGCTAGCAACATCTTCCAAGGTACCATCAATGCTCCTCAAGCCAACTGGAAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CCA 90 bp | CAGCACAGTCACCCACAATCAAAATGGAAACACAGGATCGACATCCACCATTACTGGCTGGTCTTCATCTaGTCAATGGGTAAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHSHPQSKWKHRIDIHHYWLVFI*SMGKMV Trigger: CACCATCTTACCCATTGACCAGATGAAGACCAGCCA...GTAATGGTGGATGTCGATCCTGTGTTTCCATTTTGATTGTGGGTGACTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 90 bp | GGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGGAGGGGCTGCACCATaGCTGAGCTGGGATTCACAGGGACGCTGCTCTGTGGAACCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGCGALCCQGGAAP*LSWDSQGRCSVEPG Trigger: CCCCGGTTCCACAGAGCAGCGTCCCTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 90 bp | AGCTCTGGCGGAGCTGTCGGGCCTTTGAGGTCCAGCGGCTTACAGTaGACCACCTTGGGCTGGAGGCGCACAGCCCTGGGTGAGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGGAVGPLRSSGLQ*TTLGWRRTALGEAC Trigger: GCAGGCCTCACCCAGGGCTGTGCGCCTCCAGCCCAAGGTGGTTCACTGTAAGCCGCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 90 bp | GGGTGCTGGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGGAGGGGCTaGACCATGACTGAGCTGGGATTCACAGGGACGCTGCTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCWSRLWGALLSRRG*TMTELGFTGTLLCG Trigger: TCCACAGAGCAGCGTCCCTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CCA 90 bp | CCAGCGGCTTACAGTGAACCACCTTGGGCTGGAGGCGCACAGCCCTaGGTGAGGCCTGCTCAGCCACGGGCGGTGGAGCCATGTGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: PAAYSEPPWAGGAQP*VRPAQPRAVEPCDL Trigger: TAGATCACATGGCTCCACCGCCCGTGGCTGAGCAGGCCTCACCCAGGGCTGTGCGCCTCCAGCCCAAGGTGGTTCACTGTAAGCCGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 90 bp | ACAGCCCTGGGTGAGGCCTGCTCAGCCACGGGCGGTGGAGCCATGTaGTCTAGGAGCCTCTGGTCGGAGGAAGTGCTGCTACTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TALGEACSATGGGAM*SRSLWSEEVLLLLL Trigger: AAGCAGCAGTAGCAGCACTTCCTCCGACCAGAGGCTCCTAGATCACATGGCTCCACCGCCCGTGGCTGAGCAGGCCTCACCCAGGGCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 90 bp | TGTCAGACCTGCTGGTCTTGGTGTCCCCACTGGCTGCCTTGCAGATaGCGCTGTTCGTGTGCTTGCAGCGGCAACCGGGGCGTCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQTCWSWCPHWLPCR*RCSCACSGNRGVSG Trigger: GCCTGAGACGCCCCGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 90 bp | ACGTGGCTGGTCTTCATCTGGTCAATGGGTAAGATGGTGAGTGGGTaGTGGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGGAGGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TWLVFIWSMGKMVSG*WSRLWGALLSRRGC Trigger: GCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGACCAGCCACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CCA 90 bp | TGGCTGGTCTTCATCTGGTCAATGGGTAAGATGGTGAGTGGGTGCTaGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGGAGGGGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLVFIWSMGKMVSGC*SRLWGALLSRRGCT Trigger: GGTGCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGACCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CAA 90 bp | AACCCAACCCCAGTTCGGCTCAACTGTCATCCTGCCAATGGGAGGTACGGCCTCACGCTGTTCGTGTGCTaGCAGCGGCAACCGGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NPTPVRLNCHPANGRYGLTLFVC*QRQPGR Trigger: ACGCCCCGGTTGCCGCTGCAAGCACACGAACAGCGT...GAGGCCGTACCTCCCATTGGCAGGATGACAGTTGAGCCGAACTGGGGTTGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS CCA 90 bp | ATCTGGTCAATGGGTAAGATGGTGAGTGGGTGCTGGAGCCGGCTGTaGGGCGCTCTGCTGTCAAGGAGGGGCTGCACCATGACTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IWSMGKMVSGCWSRL*GALLSRRGCTMTEL Trigger: CAGCTCAGTCATGGTGCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS TCA 90 bp | ACAGCAAGAAGTGCTTGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTaGGGTCCAGCGGCTTACAGTGAACCACCTTGGGCTGGAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TARSACLALAELSGL*GPAAYSEPPWAGGA Trigger: TGCGCCTCCAGCCCAAGGTGGTTCACTGTAAGCCGCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS GCA 90 bp | TCAGAAAGGCTTGTCAGACCTGCTGGTCTTGGTGTCCCCACTGGCTaGCTTGCAGATGACGCTGTTCGTGTGCTTGCAGCGGCAACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SERLVRPAGLGVPTG*LADDAVRVLAAATG Trigger: CCCGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTGACAAGCCTTTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CAA 90 bp | GACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACACAGCGGGCGCAGCAGTaGGAGCCGGAACAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQDHQSATCHWVSCPVDTQRAQQ*EPEQEQ Trigger: CTGCTCCTGTTCCGGCTCCAACTGCTGCGCCCGCTG...TGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS TCA 90 bp | CATTCTCCACGTGGCTGGTCTTCATCTGGTCAATGGGTAAGATGGTaGGTGGGTGCTGGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSPRGWSSSGQWVRW*VGAGAGCGALCCQG Trigger: TCCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGACCAGCCACGTGGAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCAAACCCAGCAGCCCCTGGAGGATCGTTCCCCACCTTCTCTGGCATCTTCACAGCAAGAAGTGCTaGTCTAGCTCTGGCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKPSSPWRIVPHLLWHLHSKKC*SSSGGA Trigger: AGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTG...AAGATGCCAGAGAAGGTGGGGAACGATCCTCCAGGGGCTGCTGGGTTTGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CAA 90 bp | GACCAAGATCACCAAAGTGCAACCTGCCACTGGGTCAGCTGTCCTGTGGATACATCCCCACTGGCTGCCTaGCAGATGACGCTGTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: DQDHQSATCHWVSCPVDTSPLAA*QMTLFV Trigger: CACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGA...TGTATCCACAGGACAGCTGACCCAGTGGCAGGTTGCACTTTGGTGATCTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS GCA 90 bp | CACTCTTTGCACTTACACTTTCCACAGGCCTCACACAGCAAGAAGTaGTTGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTGAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLHLHFPQASHSKK*LSSSGGAVGPLRSS Trigger: GCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTGCAAAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS GCA 90 bp | TGCAGACCCAGCAGGAAGGTAACGTCCGAGGGGACGCACACTCTTTaGACTTACACTTTCCACAGGCCTCACACAGCAAGAAGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRPSRKVTSEGTHTL*TYTFHRPHTARSAC Trigger: ACAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTGCAAAGAGTGTGCGTCCCCTCGGACGTTACCTTCCTGCTGGGTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTGTCACGTGTGCATGTGCGCATACACGGCTTATATAGCTCAACTGTCCCACAGGCACTCCTGGTaGCAGACCCAGCAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: CKCHVCMCAYTAYIAQLSHRHSW*QTQQEG Trigger: ACCTTCCTGCTGGGTCTGCAACCAGGAGTGCCTGTG...GGACAGTTGAGCTATATAAGCCGTGTATGCGCACATGCACACGTGACACTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CAA 90 bp | CCCACCTTCTCTGGCATCTTCCGACTTCCCCACCAGGGCTTCTTAACACTAAAAGGGGACGCACACTCTTaGCACTTACACTTTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: PTFSGIFRLPHQGFLTLKGDAHS*HLHFPQ Trigger: CTGTGGAAAGTGTAAGTGCAAAGAGTGTGCGTCCCC...TTTTAGTGTTAAGAAGCCCTGGTGGGGAAGTCGGAAGATGCCAGAGAAGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS-3UTR CAA 90 bp | GAACCAGCTGGCACTTTGGAAGTGATGTTAACTCAAGCCAAGCAAAAGCTGCAAGTGATAGAAGATACCTaGCACCAGACACATGCATGT | + |
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Preference number: 5 (lower is better) Translates to: EPAGTLEVMLTQAKQKLQVIEDT*HQTHAC Trigger: ACATGCATGTGTCTGGTGCAAGGTATCTTCTATCAC...TTGCAGCTTTTGCTTGGCTTGAGTTAACATCACTTCCAAAGTGCCAGCTGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | GGCGTCTCAGGCGGTCGTAGCCTCGCTGGGCCAGCTTaGCGCAGCCTGTGGCCGGCAGGTAGCACAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GVSGGRSLAGPA*RSLWPAGSTAD Trigger: GTCTGCTGTGCTACCTGCCGGCCACAGGCTGCGTCAAGCTGGCCCAGCGAGGCTACGACCGCCTGAGACGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 72 bp | GAGAGGGCGCCCATGAAGGACCAGCGGGCGCAGCAGTaGGAGCCGGAACAGGAGCAGGGGTGGTCGGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: ERAPMKDQRAQQ*EPEQEQGWSAQ Trigger: TTGCGCCGACCACCCCTGCTCCTGTTCCGGCTCCAACTGCTGCGCCCGCTGGTCCTTCATGGGCGCCCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 90 bp | AGCACCACAGAGAGGGCGCCCATGAAGGACCAGCGGGCGCAGCAGTaGGAGCCGGAACAGGAGCAGGGGTGGTCGGCGCAAGAGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: STTERAPMKDQRAQQ*EPEQEQGWSAQEPS Trigger: TGAGGGCTCTTGCGCCGACCACCCCTGCTCCTGTTCCGGCTCCAACTGCTGCGCCCGCTGGTCCTTCATGGGCGCCCTCTCTGTGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 72 bp | TCCCCACTGGCTGCCTTGCAGATGACGCTGTTCGTGTaGTTGCAGCGGCAACCGGGGCGTCTCAGGCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SPLAALQMTLFV*LQRQPGRLRRS Trigger: CGACCGCCTGAGACGCCCCGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | GGAGCTGTCGGGCCTTTGAGGTCCAGCGGCTTACAGTaGACCACCTTGGGCTGGAGGCGCACAGCCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GAVGPLRSSGLQ*TTLGWRRTALG Trigger: ACCCAGGGCTGTGCGCCTCCAGCCCAAGGTGGTTCACTGTAAGCCGCTGGACCTCAAAGGCCCGACAGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 72 bp | AGCCGGCTGTGGGGCGCTCTGCTGTCAAGGAGGGGCTaGACCATGACTGAGCTGGGATTCACAGGGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRLWGALLSRRG*TMTELGFTGTL Trigger: CAGCGTCCCTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCCTTGACAGCAGAGCGCCCCACAGCCGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | GGTGAGGCCTGCTCAGCCACGGGCGGTGGAGCCATGTaGTCTAGGAGCCTCTGGTCGGAGGAAGTGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: GEACSATGGGAM*SRSLWSEEVLL Trigger: TAGCAGCACTTCCTCCGACCAGAGGCTCCTAGATCACATGGCTCCACCGCCCGTGGCTGAGCAGGCCTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | GGGCGCTCTGCTGTCAAGGAGGGGCTGCACCATGACTaGGCTGGGATTCACAGGGACGCTGCTCTGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GRSAVKEGLHHD*AGIHRDAALWN Trigger: GTTCCACAGAGCAGCGTCCCTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCCTTGACAGCAGAGCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | CGTGGCTGGTCTTCATCTGGTCAATGGGTAAGATGGTaGGTGGGTGCTGGAGCCGGCTGTGGGGCGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGWSSSGQWVRW*VGAGAGCGALC Trigger: GCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGACCAGCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 90 bp | AAAGGCTTGTCAGACCTGCTGGTCTTGGTGTCCCCACTGGCTGCCTaGCAGATGACGCTGTTCGTGTGCTTGCAGCGGCAACCGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: KGLSDLLVLVSPLAA*QMTLFVCLQRQPGR Trigger: ACGCCCCGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTGACAAGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | AGTGCTTGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTaGGGTCCAGCGGCTTACAGTGAACCACCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SACLALAELSGL*GPAAYSEPPWA Trigger: AGCCCAAGGTGGTTCACTGTAAGCCGCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 72 bp | GTCTTCATCTGGTCAATGGGTAAGATGGTGAGTGGGTaGTGGAGCCGGCTGTGGGGCGCTCTGCTGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VFIWSMGKMVSG*WSRLWGALLSR Trigger: CCTTGACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 72 bp | CTTGTCAGACCTGCTGGTCTTGGTGTCCCCACTGGCTaGCTTGCAGATGACGCTGTTCGTGTGCTTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LVRPAGLGVPTG*LADDAVRVLAA Trigger: CGCTGCAAGCACACGAACAGCGTCATCTGCAAGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTGACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS TCA 72 bp | ACAGAGCTGGGCCGACCGCTGAAGGAGATCCAGTGGTaGGTAATATCCTGGTCACAGCGGGCAGGTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: TELGRPLKEIQW*VISWSQRAGVG Trigger: TCCTACACCTGCCCGCTGTGACCAGGATATTACTCACCACTGGATCTCCTTCAGCGGTCGGCCCAGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 90 bp | TCTTTGCACTTACACTTTCCACAGGCCTCACACAGCAAGAAGTGCTaGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTGAGGTCCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SLHLHFPQASHSKKC*SSSGGAVGPLRSSG Trigger: GCCGCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTGCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS GCA 72 bp | CACTTACACTTTCCACAGGCCTCACACAGCAAGAAGTaGTTGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HLHFPQASHSKK*LSSSGGAVGPL Trigger: CAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 72 bp | TTACACTTTCCACAGGCCTCACACAGCAAGAAGTGCTaGTCTAGCTCTGGCGGAGCTGTCGGGCCTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LHFPQASHSKKC*SSSGGAVGPLR Trigger: CCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 72 bp | CAGCAGGAAGGTAACGTCCGAGGGGACGCACACTCTTaGCACTTACACTTTCCACAGGCCTCACACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QQEGNVRGDAHS*HLHFPQASHSK Trigger: CTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTGCAAAGAGTGTGCGTCCCCTCGGACGTTACCTTCCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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| CDS CAA 90 bp | TTGCAGACCCAGCAGGAAGGTAACGTCCGAGGGGACGCACACTCTTaGCACTTACACTTTCCACAGGCCTCACACAGCAAGAAGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LQTQQEGNVRGDAHS*HLHFPQASHSKKCL Trigger: CAAGCACTTCTTGCTGTGTGAGGCCTGTGGAAAGTGTAAGTGCAAAGAGTGTGCGTCCCCTCGGACGTTACCTTCCTGCTGGGTCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025295.8 |
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