Pregenerated sensors for SPRY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022114Ensembl transcript IDs: ENSMUST00000022709.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTaGTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTTGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GYSQTRTTSSPRSVG*FSLCNVGLQLLLFF Trigger: GAAGAACAACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR CAA 90 bp | GCATGGGCTATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTaGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: AWAIHKQEQLLRLGV*AALAYAMWVSNFCC Trigger: ACAACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAATAGCCCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR-3UTR GCA 90 bp | ACATTTTGCATGGGCTATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTACCCTCTACGAACAGTaGCAAGATTACAACTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: TFCMGYSQTRTTSSPRSVTLYEQ*QDYNCL Trigger: TAAACAGTTGTAATCTTGGCACTGTTCGTAGAGGGT...AACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAATAGCCCATGCAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCTATTTTATATTGAACATAGCATCTGTAACCTCTCCTTGGCAGCAACCATTAGCTTATGCAATGTaGGTCTCCAACTTCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: IFYFILNIASVTSPWQQPLAYAM*VSNFCC Trigger: ACAACAGAAGTTGGAGACCCACATTGCATAAGCTAA...TGGTTGCTGCCAAGGAGAGGTTACAGATGCTATGTTCAATATAAAATAGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR-3UTR CAA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCGGTCTCCAACTTCTGTaGTTCTTCCTTCGGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCGLQLL*FFLRVP Trigger: TGGAACCCGAAGGAAGAACAACAGAAGTTGGAGACC...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR GCA 72 bp | CAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTaGTTTAGCTTATGCAATGTGGGTCTCCAACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QTRTTSSPRSVG*FSLCNVGLQLL Trigger: CAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR TCA 72 bp | CCAACTTCTGTTGTTCTTCCTTCGGGTTCCATTAGCTaGATTGTAGCAAGCGTATCAGTTAAAATGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: PTSVVLPSGSIS*IVASVSVKMAH Trigger: ATGTGCCATTTTAACTGATACGCTTGCTACAATTCAGCTAATGGAACCCGAAGGAAGAACAACAGAAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | CTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCGGACAGAGGGGCCCGTaGAGAATGGACCTGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LRLGVLAALAYAMWVSNFGQRGP*RMDLRG Trigger: CCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCC...GAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | CTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCCTGTCATGGGCTGTCTaGAGCAAAGGCTGCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: LRLGVLAALAYAMWVSNFLSWAV*SKGCDP Trigger: CGGGTCGCAGCCTTTGCTGCAGACAGCCCATGACAG...GAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | AGCCTCTCACTGCAAACCACAAATCCCCTAACCCTCTACGAACAGTGCCAAGATCATGTTTGTGCTGAGTaGAGGGGCGAGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLSLQTTNPLTLYEQCQDHVCAE*RGEEQA Trigger: AGCCTGCTCCTCGCCCCTCCACTCAGCACAAACATG...ATCTTGGCACTGTTCGTAGAGGGTTAGGGGATTTGTGGTTTGCAGTGAGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | CGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTCTTTCATGTTTGTGCTaGGTGGAGGGGCGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLGVLAALAYAMWVSNFCLSCLC*VEGRGA Trigger: TGCTCCTCGCCCCTCCACTCAGCACAAACATGAAAG...ACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | CGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTCGGATGGCTCTGATCTaGTCCAGAGACAAGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: RLGVLAALAYAMWVSNFCRMALI*SRDKTC Trigger: ACACGTCTTGTCTCTGGATCAGATCAGAGCCATCCG...ACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | CTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGCACTCCTTACACTTaGACTTGCCGCAGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LRLGVLAALAYAMWVSNFCTPYT*TCRSPH Trigger: GTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCA...GAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCCTTGAGCCCAGGTCTTaGGACCACAGTAGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCLEPRS*DHSRAL Trigger: GAGGGCCCTACTGTGGTCCCAAGACCTGGGCTCAAG...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCGCGAGGGCTGGAGCCTaGGAGGCTGGCGGTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PNVQHISIIFCDCAMKHSARAGA*EAGGAP Trigger: CGGAGCACCGCCAGCCTCCCAGGCTCCAGCCCTCGC...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | CAAACCACAAATCCCCTAACCCTCTACGAACAGTGCCAAGATTACAACTGTTTAAAGGCTGCGACCCGTTaGCACTCTGAGCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QTTNPLTLYEQCQDYNCLKAATR*HSELWP Trigger: AGGCCAGAGCTCAGAGTGGCAACGGGTCGCAGCCTT...TAAACAGTTGTAATCTTGGCACTGTTCGTAGAGGGTTAGGGGATTTGTGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | AAAAGCCTCTCACTGCAAACCACAAATCCCCTAACCCTCTACGAACAGTGCCAACCTTACACTTGCACTTaGCGCAGTCCTCACACCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSLSLQTTNPLTLYEQCQPYTCT*RSPHTC Trigger: ACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGG...TTGGCACTGTTCGTAGAGGGTTAGGGGATTTGTGGTTTGCAGTGAGAGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCCTGGGAGGCTGGCGGTaGTCCGGCAGACCGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PNVQHISIIFCDCAMKHSLGGWR*SGRPWS Trigger: ACTCCACGGTCTGCCGGAGCACCGCCAGCCTCCCAG...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCGCTGAGCAGAGGCACTaGTTGTCACAGATCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCAEQRH*LSQIQS Trigger: GGACTGGATCTGTGACAAGCAGTGCCTCTGCTCAGC...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | CTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTTGTAAGTCCCATAGTCAATaGCGTTCTGGGCTGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGVLAALAYAMWVSNFCCKSHSQ*RSGLSR Trigger: TCTGCTCAGCCCAGAACGTCATTGACTATGGGACTT...ACAACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | AGTCCAAAGGGAAATCAGAGACTTACAATAAAGGTTTCCTGTAAGGCAAAATACCGTGAAGAATGGACCTaGGAGGGCTGGAGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SPKGNQRLTIKVSCKAKYREEWT*EGWSLG Trigger: TCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACG...GTATTTTGCCTTACAGGAAACCTTTATTGTAAGTCTCTGATTTCCCTTTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | TATATTGAACATAGCATCTGTAACCTCTCCTTGGCAGCAACCATCACATCCTCATCTGTTCCGAGGAGCTaGTGCTGGTACTTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YIEHSICNLSLAATITSSSVPRS*CWYLSL Trigger: CAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGA...TGAGGATGTGATGGTTGCTGCCAAGGAGAGGTTACAGATGCTATGTTCAATATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | CAAACCACAAATCCCCTAACCCTCTACGAACAGTGCCAAGATTACAACTGTTTATGTTTCGGATGGCTCTaGTCTGATCCAGAGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: QTTNPLTLYEQCQDYNCLCFGWL*SDPETR Trigger: TCTTGTCTCTGGATCAGATCAGAGCCATCCGAAACA...TAAACAGTTGTAATCTTGGCACTGTTCGTAGAGGGTTAGGGGATTTGTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR TCA 90 bp | TCAAGTCCAAAGGGAAATCAGAGACTTACAATAAAGGTTTCCTGTAAGGCAAAAAATGACGTTCTGGGCTaGGCAGAGGCACTGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSPKGNQRLTIKVSCKAKNDVLG*AEALLV Trigger: GACAAGCAGTGCCTCTGCTCAGCCCAGAACGTCATT...TTTTGCCTTACAGGAAACCTTTATTGTAAGTCTCTGATTTCCCTTTGGACTTGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | CAAACCACAAATCCCCTAACCCTCTACGAACAGTGCCAAGATTACAACTGTTTAATCATCCTTGCTCAGTaGCTTAACGTCACCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QTTNPLTLYEQCQDYNCLIILAQ*LNVTRL Trigger: AAGCCTGGTGACGTTAAGCCACTGAGCAAGGATGAT...TAAACAGTTGTAATCTTGGCACTGTTCGTAGAGGGTTAGGGGATTTGTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCTGTCCTCATCGTCATTaGAGCAGTGATAGAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCCPHRH*SSDRRD Trigger: GTCTCTTCTATCACTGCTCCAATGACGATGAGGACA...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| 3UTR CAA 72 bp | ATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTaGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: IHKQEQLLRLGV*AALAYAMWVSN Trigger: GTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCCCGAGGAGCTGCTGCTaGTACTTGTCCTTGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: PNVQHISIIFCDCAMKHSPRSCC*YLSLYC Trigger: GCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGG...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CCA 90 bp | AGTCCAAAGGGAAATCAGAGACTTACAATAAAGGTTTCCTGTAAGGCAAAATACCATCGCGTACAACAATaGGACTGGCTGCAAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SPKGNQRLTIKVSCKAKYHRVQQ*DWLQEH Trigger: GTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATG...GTATTTTGCCTTACAGGAAACCTTTATTGTAAGTCTCTGATTTCCCTTTGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCGTTCCGAGGAGCTGCTaGTGGTACTTGTCCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PNVQHISIIFCDCAMKHSVPRSC*WYLSLY Trigger: GTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAAC...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR GCA 90 bp | ATTTTCTATTTTATATTGAACATAGCATCTGTAACCTCTCCTTGGCAGCAACCAAACAATGGGACTGGCTaGAAGAGCACGGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFYFILNIASVTSPWQQPNNGTG*KSTGCQ Trigger: CTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTT...TGGTTGCTGCCAAGGAGAGGTTACAGATGCTATGTTCAATATAAAATAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | ACAGTGCTGATGGACCTGGACAGAGGGGCCCGTGAAGAATGGACCTaGGAGGGCTGGAGCCTGGGAGGCTGGCGGTGCTCCGGCAGACCG | + |
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Preference number: 5 (lower is better) Translates to: TVLMDLDRGAREEWT*EGWSLGGWRCSGRP Trigger: CGGTCTGCCGGAGCACCGCCAGCCTCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCATCAGCACTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | GAGCTGACAGTGCTGATGGACCTGGACAGAGGGGCCCGTGAAGAATaGACCTGCGAGGGCTGGAGCCTGGGAGGCTGGCGGTGCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ELTVLMDLDRGAREE*TCEGWSLGGWRCSG Trigger: GCCGGAGCACCGCCAGCCTCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCATCAGCACTGTCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | ATGGACCTGGACAGAGGGGCCCGTGAAGAATGGACCTGCGAGGGCTaGAGCCTGGGAGGCTGGCGGTGCTCCGGCAGACCGTGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: MDLDRGAREEWTCEG*SLGGWRCSGRPWSL Trigger: AAGACTCCACGGTCTGCCGGAGCACCGCCAGCCTCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | TGTACCTGCTGGGTAAGGGCATCTCTTGGATCCGGCTCCCCGCGCTaGCTGCCACTGTCATGGGCTGTCTGCAGCAAAGGCTGCGACCCG | + |
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Preference number: 5 (lower is better) Translates to: CTCWVRASLGSGSPR*LPLSWAVCSKGCDP Trigger: CGGGTCGCAGCCTTTGCTGCAGACAGCCCATGACAGTGGCAGGCAGCGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCAGCAGGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | CTGATCCAGAGACAAGACGTGTACCTGCTGGGTAAGGGCATCTCTTaGATCCGGCTCCCCGCGCTGCCTGCCACTGTCATGGGCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LIQRQDVYLLGKGIS*IRLPALPATVMGCL Trigger: CAGACAGCCCATGACAGTGGCAGGCAGCGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCAGCAGGTACACGTCTTGTCTCTGGATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | CCGACGGCAGGGGCCTCGGGTAGGTGCACTCCTTACACTTGCACTTaGCGCAGTCCTCACACCTGTAGGCATGCAGACCCAAATCATCCT | + |
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Preference number: 5 (lower is better) Translates to: PTAGASGRCTPYTCT*RSPHTCRHADPNHP Trigger: AGGATGATTTGGGTCTGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCCTGCCGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | TCCAGTCCGACGGCAGGGGCCTCGGGTAGGTGCACTCCTTACACTTaGACTTGCCGCAGTCCTCACACCTGTAGGCATGCAGACCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SSPTAGASGRCTPYT*TCRSPHTCRHADPN Trigger: ATTTGGGTCTGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCCTGCCGTCGGACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | ACTGCTTGTCACAGATCCAGTCCGACGGCAGGGGCCTCGGGTAGGTaGACTCCTTACACTTGCACTTGCCGCAGTCCTCACACCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TACHRSSPTAGASGR*TPYTCTCRSPHTCR Trigger: CCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCCTGCCGTCGGACTGGATCTGTGACAAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | GATTTAGGCTGCACTCGGATTATTCCATCAGCAGCAGCAGGCCCGTaGGAGAAGGACGGTCCTAACAGTCTCTGTTCCGAGGAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: DLGCTRIIPSAAAGP*EKDGPNSLCSEELL Trigger: CAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGTCCTTCTCCCACGGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 90 bp | TTTCACACAGCACACACAAGTCCCATAGTCAATGACGTTCTGGGCTaGGCAGAGGCACTGCTTGTCACAGATCCAGTCCGACGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FHTAHTSPIVNDVLG*AEALLVTDPVRRQG Trigger: CCCCTGCCGTCGGACTGGATCTGTGACAAGCAGTGCCTCTGCTCAGCCCAGAACGTCATTGACTATGGGACTTGTGTGTGCTGTGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 90 bp | TTGCTCAGTGGCTTAACGTCACCAGGCTTGAGCTCCGATTTAGGCTaGACTCGGATTATTCCATCAGCAGCAGCAGGCCCGTGGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLSGLTSPGLSSDLG*TRIIPSAAAGPWEK Trigger: CTTCTCCCACGGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCCACTGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | GTCCTCACACCTGTAGGCATGCAGACCCAAATCATCCTTGCTCAGTaGCTTAACGTCACCAGGCTTGAGCTCCGATTTAGGCTGCACTCG | + |
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Preference number: 5 (lower is better) Translates to: VLTPVGMQTQIILAQ*LNVTRLELRFRLHS Trigger: CGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCCACTGAGCAAGGATGATTTGGGTCTGCATGCCTACAGGTGTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | AGAGACATGACTCCCATCGCTGACCATCGCGTACAACAATGGGACTaGCTGCAAGAGCACGGGTTGTCAGCACAATTGTCCTCATCGTCA | + |
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Preference number: 5 (lower is better) Translates to: RDMTPIADHRVQQWD*LQEHGLSAQLSSSS Trigger: TGACGATGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGGAGTCATGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 90 bp | GTAGGGCCCTCTGTGTACTCATTGGTGTTTCGGATGGCTCTGATCTaGTCCAGAGACAAGACGTGTACCTGCTGGGTAAGGGCATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VGPSVYSLVFRMALI*SRDKTCTCWVRASL Trigger: AAGAGATGCCCTTACCCAGCAGGTACACGTCTTGTCTCTGGATCAGATCAGAGCCATCCGAAACACCAATGAGTACACAGAGGGCCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 90 bp | CCTTGGCTGGAAGGTAACACCATAAACAAGGCAAAAAGAGAGACATaGCTCCCATCGCTGACCATCGCGTACAACAATGGGACTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PWLEGNTINKAKRET*LPSLTIAYNNGTGC Trigger: GCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGGAGTCATGTCTCTCTTTTTGCCTTGTTTATGGTGTTACCTTCCAGCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | GGCTGCAAGAGCACGGGTTGTCAGCACAATTGTCCTCATCGTCATTaGAGCAGTGATAGAAGAGACCTTTCACACAGCACACACAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: GCKSTGCQHNCPHRH*SSDRRDLSHSTHKS Trigger: GGACTTGTGTGTGCTGTGTGAAAGGTCTCTTCTATCACTGCTCCAATGACGATGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 90 bp | AAAAAGAGAGACATGACTCCCATCGCTGACCATCGCGTACAACAATaGGACTGGCTGCAAGAGCACGGGTTGTCAGCACAATTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: KKRDMTPIADHRVQQ*DWLQEHGLSAQLSS Trigger: TGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGGAGTCATGTCTCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCAAAGGGAAATCAGAGACTTACAATAAAGGTTTCCTGTAAGGCAAAAGGGCGAGGAGCAGGCTaGAGCCCAGGTCTTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: SSPKGNQRLTIKVSCKAKGRGAG*SPGLGT Trigger: GGTCCCAAGACCTGGGCTCAAGCCTGCTCCTCGCCC...TTTTGCCTTACAGGAAACCTTTATTGTAAGTCTCTGATTTCCCTTTGGACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | CTAGGAGTGTTGGCTGCTTTAGCTTATGCAATGTGGGTCTCCAACTTCTGTTGTTCCTTACACTTGCACTaGCCGCAGTCCTCACACCTG | + |
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Preference number: 5 (lower is better) Translates to: LGVLAALAYAMWVSNFCCSLHLH*PQSSHL Trigger: CAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGA...ACAACAGAAGTTGGAGACCCACATTGCATAAGCTAAAGCAGCCAACACTCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | ACACATTTTGCATGGGCTATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGCCCTCTGTGTACTCATaGGTGTTTCGGATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: THFAWAIHKQEQLLRLGVPSVYS*VFRMAL Trigger: CAGAGCCATCCGAAACACCAATGAGTACACAGAGGG...CACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAATAGCCCATGCAAAATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | ATGGGAGGGGGCGGAGCAACAATCCCTATTACTGCAATATTCCTGATTAATAATTTAACGTCACCAGGCTaGAGCTCCGATTTAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: MGGGGATIPITAIFLINNLTSPG*SSDLGC Trigger: GCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAA...ATTATTAATCAGGAATATTGCAGTAATAGGGATTGTTGCTCCGCCCCCTCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCGGGTTGTCAGCACAATaGTCCTCATCGTCATTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCGLSAQ*SSSSLE Trigger: CTCCAATGACGATGAGGACAATTGTGCTGACAACCC...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | AGTCCAAAGGGAAATCAGAGACTTACAATAAAGGTTTCCTGTAAGGCAAAATACGAGCAGAGGCACTGCTaGTCACAGATCCAGTCCGAC | + |
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Preference number: 5 (lower is better) Translates to: SPKGNQRLTIKVSCKAKYEQRHC*SQIQSD Trigger: GTCGGACTGGATCTGTGACAAGCAGTGCCTCTGCTC...GTATTTTGCCTTACAGGAAACCTTTATTGTAAGTCTCTGATTTCCCTTTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | TCACAAACAAGAACAACTTCTTCGCCTAGGAGTGTTGGCTGCTTTAGCTTATGCGGGACAGTGGGAACTTaGCAGCAAACTGTATTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SQTRTTSSPRSVGCFSLCGTVGT*QQTVFE Trigger: CTCAAATACAGTTTGCTGCAAAGTTCCCACTGTCCC...GCATAAGCTAAAGCAGCCAACACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | ACACATTTTGCATGGGCTATTCACAAACAAGAACAACTTCTTCGCCTAGGAGTGAGACCCAAATCATCCTaGCTCAGTGGCTTAACGTCA | + |
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Preference number: 5 (lower is better) Translates to: THFAWAIHKQEQLLRLGVRPKSS*LSGLTS Trigger: TGACGTTAAGCCACTGAGCAAGGATGATTTGGGTCT...CACTCCTAGGCGAAGAAGTTGTTCTTGTTTGTGAATAGCCCATGCAAAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCTGCTGGTACTTGTCCTaGTACTGCTCCGAGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: PNVQHISIIFCDCAMKHSCWYLS*YCSETL Trigger: CAGGGTCTCGGAGCAGTACAAGGACAAGTACCAGCA...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCGTGCACTCCTTACACTaGCACTTGCCGCAGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PNVQHISIIFCDCAMKHSVHSLH*HLPQSS Trigger: TGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCAC...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS-3UTR CAA 90 bp | CCGAATGTACAACATATTAGTATAATATTTTGTGACTGTGCCATGAAGCATAGCCTGCAAGAGCACGGGTaGTCAGCACAATTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PNVQHISIIFCDCAMKHSLQEHG*SAQLSS Trigger: TGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAG...GCTATGCTTCATGGCACAGTCACAAAATATTATACTAATATGTTGTACATTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | GGGCCCGTGAAGAATGGACCTGCGAGGGCTGGAGCCTaGGAGGCTGGCGGTGCTCCGGCAGACCGTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GPVKNGPARAGA*EAGGAPADRGV Trigger: GACTCCACGGTCTGCCGGAGCACCGCCAGCCTCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACGGGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | GCTGACAGTGCTGATGGACCTGGACAGAGGGGCCCGTaGAGAATGGACCTGCGAGGGCTGGAGCCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ADSADGPGQRGP*RMDLRGLEPGR Trigger: CCTCCCAGGCTCCAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCATCAGCACTGTCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | TGGGTAAGGGCATCTCTTGGATCCGGCTCCCCGCGCTaGCTGCCACTGTCATGGGCTGTCTGCAGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: WVRASLGSGSPR*LPLSWAVCSKG Trigger: GCCTTTGCTGCAGACAGCCCATGACAGTGGCAGGCAGCGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | CACAGATCCAGTCCGACGGCAGGGGCCTCGGGTAGGTaGACTCCTTACACTTGCACTTGCCGCAGTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: HRSSPTAGASGR*TPYTCTCRSPH Trigger: GTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCCTGCCGTCGGACTGGATCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | TGCTCCGGCAGACCGTGGAGTCTTTCATGTTTGTGCTaGGTGGAGGGGCGAGGAGCAGGCTTGAGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CSGRPWSLSCLC*VEGRGAGLSPG Trigger: ACCTGGGCTCAAGCCTGCTCCTCGCCCCTCCACTCAGCACAAACATGAAAGACTCCACGGTCTGCCGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | GGGGCCTCGGGTAGGTGCACTCCTTACACTTGCACTTaGCGCAGTCCTCACACCTGTAGGCATGCAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: GASGRCTPYTCT*RSPHTCRHADP Trigger: TGGGTCTGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | ACGGCAGGGGCCTCGGGTAGGTGCACTCCTTACACTTaGACTTGCCGCAGTCCTCACACCTGTAGGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: TAGASGRCTPYT*TCRSPHTCRHA Trigger: TGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAAGGAGTGCACCTACCCGAGGCCCCTGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | AGACAAGACGTGTACCTGCTGGGTAAGGGCATCTCTTaGATCCGGCTCCCCGCGCTGCCTGCCACTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: RQDVYLLGKGIS*IRLPALPATVM Trigger: CATGACAGTGGCAGGCAGCGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCAGCAGGTACACGTCTTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | GCTGCTGGTACTTGTCCTTGTACTGCTCCGAGACCCTaGGCTGACAGTGCTGATGGACCTGGACAGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAGTCPCTAPRP*ADSADGPGQRG Trigger: GCCCCTCTGTCCAGGTCCATCAGCACTGTCAGCTCAGGGTCTCGGAGCAGTACAAGGACAAGTACCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | AGGACGGTCCTAACAGTCTCTGTTCCGAGGAGCTGCTaGTGGTACTTGTCCTTGTACTGCTCCGAGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: RTVLTVSVPRSC*WYLSLYCSETL Trigger: CAGGGTCTCGGAGCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | GGCTTAACGTCACCAGGCTTGAGCTCCGATTTAGGCTaGACTCGGATTATTCCATCAGCAGCAGCAGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GLTSPGLSSDLG*TRIIPSAAAGP Trigger: CGGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | ACGGTCCTAACAGTCTCTGTTCCGAGGAGCTGCTGCTaGTACTTGTCCTTGTACTGCTCCGAGACCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TVLTVSVPRSCC*YLSLYCSETLS Trigger: GCTCAGGGTCTCGGAGCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | TGCACTCGGATTATTCCATCAGCAGCAGCAGGCCCGTaGGAGAAGGACGGTCCTAACAGTCTCTGTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: CTRIIPSAAAGP*EKDGPNSLCSE Trigger: CTCGGAACAGAGACTGTTAGGACCGTCCTTCTCCCACGGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | AGAAGGACGGTCCTAACAGTCTCTGTTCCGAGGAGCTaGTGCTGGTACTTGTCCTTGTACTGCTCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: RRTVLTVSVPRS*CWYLSLYCSET Trigger: GGTCTCGGAGCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGTCCTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | ACTCCCATCGCTGACCATCGCGTACAACAATGGGACTaGCTGCAAGAGCACGGGTTGTCAGCACAATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPIADHRVQQWD*LQEHGLSAQLS Trigger: GGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | GACATGACTCCCATCGCTGACCATCGCGTACAACAATaGGACTGGCTGCAAGAGCACGGGTTGTCAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: DMTPIADHRVQQ*DWLQEHGLSAQ Trigger: TTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGGAGTCATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | GGCCCTCTGTGTACTCATTGGTGTTTCGGATGGCTCTaGTCTGATCCAGAGACAAGACGTGTACCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GPLCTHWCFGWL*SDPETRRVPAG Trigger: CCCAGCAGGTACACGTCTTGTCTCTGGATCAGATCAGAGCCATCCGAAACACCAATGAGTACACAGAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | GCACACACAAGTCCCATAGTCAATGACGTTCTGGGCTaGGCAGAGGCACTGCTTGTCACAGATCCAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: AHTSPIVNDVLG*AEALLVTDPVR Trigger: TCGGACTGGATCTGTGACAAGCAGTGCCTCTGCTCAGCCCAGAACGTCATTGACTATGGGACTTGTGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS GCA 72 bp | CCATCGCTGACCATCGCGTACAACAATGGGACTGGCTaGAAGAGCACGGGTTGTCAGCACAATTGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PSLTIAYNNGTG*KSTGCQHNCPH Trigger: ATGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CAA 72 bp | CGCGTACAACAATGGGACTGGCTGCAAGAGCACGGGTaGTCAGCACAATTGTCCTCATCGTCATTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RVQQWDWLQEHG*SAQLSSSSLEQ Trigger: CTGCTCCAATGACGATGAGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | GACCTTTCACACAGCACACACAAGTCCCATAGTCAATaGCGTTCTGGGCTGAGCAGAGGCACTGCTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: DLSHSTHKSHSQ*RSGLSRGTACH Trigger: GTGACAAGCAGTGCCTCTGCTCAGCCCAGAACGTCATTGACTATGGGACTTGTGTGTGCTGTGTGAAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | CCTGTAGGCATGCAGACCCAAATCATCCTTGCTCAGTaGCTTAACGTCACCAGGCTTGAGCTCCGATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PVGMQTQIILAQ*LNVTRLELRFR Trigger: CCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCCACTGAGCAAGGATGATTTGGGTCTGCATGCCTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CAA 90 bp | TGCAGACCCAAATCATCCTTGCTCAGTGGCTTAACGTCACCAGGCTaGAGCTCCGATTTAGGCTGCACTCGGATTATTCCATCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CRPKSSLLSGLTSPG*SSDLGCTRIIPSAA Trigger: TGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCCACTGAGCAAGGATGATTTGGGTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS TCA 72 bp | TCTGTGTACTCATTGGTGTTTCGGATGGCTCTGATCTaGTCCAGAGACAAGACGTGTACCTGCTGGGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: SVYSLVFRMALI*SRDKTCTCWVR Trigger: CCTTACCCAGCAGGTACACGTCTTGTCTCTGGATCAGATCAGAGCCATCCGAAACACCAATGAGTACACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CCA 72 bp | AGCACGGGTTGTCAGCACAATTGTCCTCATCGTCATTaGAGCAGTGATAGAAGAGACCTTTCACACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: STGCQHNCPHRH*SSDRRDLSHST Trigger: TGTGCTGTGTGAAAGGTCTCTTCTATCACTGCTCCAATGACGATGAGGACAATTGTGCTGACAACCCGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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| CDS CAA 72 bp | AAATCATCCTTGCTCAGTGGCTTAACGTCACCAGGCTaGAGCTCCGATTTAGGCTGCACTCGGATTATTCCA | + |
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Preference number: 6 (lower is better) Translates to: KSSLLSGLTSPG*SSDLGCTRIIP Trigger: TGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTAAGCCACTGAGCAAGGATGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022709.6 |
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