Pregenerated sensors for SPRED3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037239Ensembl transcript IDs: ENSMUST00000048923.7
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTCTGCGGTCTCTGCTTGATCCCTGTAGCTGCCTGCCTCTGCTaGGCTGACAGCACACAATCTTCCATAGCAAAGCCAGGCCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: AFCGLCLIPVAACLC*ADSTQSSIAKPGPR Trigger: TCTAGGGCCTGGCTTTGCTATGGAAGATTGTGTGCTGTCAGCTCAGCAGAGGCAGGCAGCTACAGGGATCAAGCAGAGACCGCAGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 90 bp | GGATCAAGGTGTCAGGCCAAAACCAATCCCAAAATTGTGAGGGCTTaGCTCCTGCACCCAGGGTCCAATGGCATCTTGGGTCTTAGATCC | + |
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Preference number: 1 (lower is better) Translates to: GSRCQAKTNPKIVRA*LLHPGSNGILGLRS Trigger: GGATCTAAGACCCAAGATGCCATTGGACCCTGGGTGCAGGAGTCAAGCCCTCACAATTTTGGGATTGGTTTTGGCCTGACACCTTGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 90 bp | CTCATAAAGCCCTTTGGATTTGCTCTCGGGCTGAGAGTCAAGGAATaGAGGACCTGGGTTACCATGACCACCGCATCTTCTAAGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LIKPFGFALGLRVKE*RTWVTMTTASSKFQ Trigger: CTGGAACTTAGAAGATGCGGTGGTCATGGTAACCCAGGTCCTTCATTCCTTGACTCTCAGCCCGAGAGCAAATCCAAAGGGCTTTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 90 bp | GGCCTCGGTATCTCAGTCCTCAGTTTGGGGTCCAGGTACCAGATCTaGGATCTCTCAAATCCATTCAAGTTCCAGATATACCTAAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: GLGISVLSLGSRYQI*DLSNPFKFQIYLSL Trigger: CAAACTTAGGTATATCTGGAACTTGAATGGATTTGAGAGATCCCAGATCTGGTACCTGGACCCCAAACTGAGGACTGAGATACCGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 90 bp | CCTAACGGTGCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTaGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: PNGAERLWHLVAECL*SEGIKVSGQNQSQN Trigger: ATTTTGGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGCACCGTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 90 bp | GACACAAATATTCATCCCTTGAACCCCCACAAGGCCACCCAAGTCTaGGTAATGAAAAATGATTCAAGTGTACATTCCCAGGTACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: DTNIHPLNPHKATQV*VMKNDSSVHSQVLR Trigger: CCTAAGTACCTGGGAATGTACACTTGAATCATTTTTCATTACCCAGACTTGGGTGGCCTTGTGGGGGTTCAAGGGATGAATATTTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR GCA 90 bp | CCATTCAAGTTCCAGATATACCTAAGTTTGGGTTTTAGGTTCATATaGTGTTCAGGGTCCTGGACCTTCAATTTTTGGGTCTTCAGACCG | + |
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Preference number: 1 (lower is better) Translates to: PFKFQIYLSLGFRFI*CSGSWTFNFWVFRP Trigger: CGGTCTGAAGACCCAAAAATTGAAGGTCCAGGACCCTGAACAGCATATGAACCTAAAACCCAAACTTAGGTATATCTGGAACTTGAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 90 bp | ATATACCTAAGTTTGGGTTTTAGGTTCATATGCTGTTCAGGGTCCTaGACCTTCAATTTTTGGGTCTTCAGACCGATTTCCAAACCAGCT | + |
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Preference number: 1 (lower is better) Translates to: IYLSLGFRFICCSGS*TFNFWVFRPISKPA Trigger: AGCTGGTTTGGAAATCGGTCTGAAGACCCAAAAATTGAAGGTCCAGGACCCTGAACAGCATATGAACCTAAAACCCAAACTTAGGTATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACCAGGGCAAGGGGACCTaGGAGAGGGGGTACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GALGSEVFLAPRVQSSMHQGKGT*ERGYWR Trigger: TCTCCAGTACCCCCTCTCCCAGGTCCCCTTGCCCTG...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACGCCTTCTGCGGTCTCTaGTTGATCCCTGTAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GALGSEVFLAPRVQSSMHAFCGL*LIPVAA Trigger: GGCAGCTACAGGGATCAAGCAGAGACCGCAGAAGGC...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACAAAATTGTGAGGGCTTaGCTCCTGCACCCAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GALGSEVFLAPRVQSSMHKIVRA*LLHPGS Trigger: GGACCCTGGGTGCAGGAGTCAAGCCCTCACAATTTT...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACCCAATCCCAAAATTGTaGGGGCTTGACTCCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: GALGSEVFLAPRVQSSMHPIPKL*GLDSCT Trigger: GGTGCAGGAGTCAAGCCCTCACAATTTTGGGATTGG...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACATAGTGTGGGAAATCTaGAAGGTTGGGGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GALGSEVFLAPRVQSSMHIVWEI*KVGVGV Trigger: CACCCCCACCCCAACCTTGCAGATTTCCCACACTAT...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | CTTGACTCCTGCACCCAGGGTCCAATGGCATCTTGGGTCTTAGATCCAGGGCTCGGGACCATTTTCTGGTaGTTCTGGGTCCTCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LDSCTQGPMASWVLDPGLGTIFW*FWVLWS Trigger: AGACCAGAGGACCCAGAATCACCAGAAAATGGTCCC...GAGCCCTGGATCTAAGACCCAAGATGCCATTGGACCCTGGGTGCAGGAGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGGGGTTCAGTCCTCCATaGACCCCAGATATGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: STSACPDTNKVTDWLGIKGFSPP*TPDMGA Trigger: TGCCCCCATATCTGGGGTGCATGGAGGACTGAACCC...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CAA 90 bp | CCTCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTaGGAATCAAGATCAGGAAGAGAAATGTTGGCGGACCTCCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PPHQPALTLTRLQTG*ESRSGREMLADLPQ Trigger: TTGGGGGAGGTCCGCCAACATTTCTCTTCCTGATCTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTTCAGGGTCCAAGATGTaGGCTCCTGGGCCCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KDCGILLLNVSGLKGSRCSGSKM*APGPLE Trigger: CTCAAGGGGCCCAGGAGCTCACATCTTGGACCCTGA...ACACCTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCCAGGCCAGTATCTGGTaGTTCCAAACCATCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPQASIW*FQTILG Trigger: CCCCAGGATGGTTTGGAATCACCAGATACTGGCCTG...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTTGGGCCCAAAGTaGAGGTGGCCTTCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AERLWHLVAECLWSEGIKVLGPK*RWPSGR Trigger: TCTGCCTGAAGGCCACCTGCACTTTGGGCCCAACAC...CTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGACTCCTGCACCCAGGGTCCAATGGCATCTTGGGTCTTAGATCCAGGGCTCTCCAGGTACCAGATCTaGGATCTCTCAAATCCATTC | + |
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Preference number: 2 (lower is better) Translates to: LDSCTQGPMASWVLDPGLSRYQI*DLSNPF Trigger: GAATGGATTTGAGAGATCCCAGATCTGGTACCTGGA...GAGCCCTGGATCTAAGACCCAAGATGCCATTGGACCCTGGGTGCAGGAGTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGAACCCCCAACTGAGATaGAAGAGGTTCACAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: STSACPDTNKVTDWLGIKNPQLR*KRFTGE Trigger: CTCCCCTGTGAACCTCTTCCATCTCAGTTGGGGGTT...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCCACTTGCACATGAACTaGTGGCAATGTCTGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPHLHMN*WQCLWT Trigger: AGTCCACAGACATTGCCATCAGTTCATGTGCAAGTG...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGCAGCATCTTGGTATCTaGTATCTGGACCTTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: STSACPDTNKVTDWLGIKQHLGI*YLDLAE Trigger: CTCAGCAAGGTCCAGATATCAGATACCAAGATGCTG...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGGGTTTTAGGTTCATATaGTGTTCAGGGTCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: SQGRDLNVLGVIVWEICKGFRFI*CSGSWT Trigger: GGTCCAGGACCCTGAACAGCATATGAACCTAAAACC...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR GCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGAAAGCCCTTTGGATTTaGTCTCGGGCTGAGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SQGRDLNVLGVIVWEICKKALWI*SRAESQ Trigger: TTGACTCTCAGCCCGAGAGCAAATCCAAAGGGCTTT...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGATCATGGATCAGAGGTaGGTATCGACAAGGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: STSACPDTNKVTDWLGIKIMDQR*VSTRNR Trigger: CCTGTTCCTTGTCGATACCCACCTCTGATCCATGAT...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR TCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAAGCTCCTGGGCCCCTTaGGATGCAATGTTTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: HPGAIRASKCEDTRSQVKSSWAP*DAMFEN Trigger: ATTTTCAAACATTGCATCTCAAGGGGCCCAGGAGCT...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGAAGGCCACCCAAGTCTaGGTAATGAAAAATGATTCA | + |
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Preference number: 2 (lower is better) Translates to: STSACPDTNKVTDWLGIKKATQV*VMKNDS Trigger: TGAATCATTTTTCATTACCCAGACTTGGGTGGCCTT...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGTCTAAGTCTTCTCAGTaGGGAAAAGGTATGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: AERLWHLVAECLWSEGIKSKSSQ*GKGMEN Trigger: ATTCTCCATACCTTTTCCCCACTGAGAAGACTTAGA...CTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CAA 90 bp | ATCTGGGATCTCTCAAATCCATTCAAGTTCCAGATATACCTAAGTTaGGGTTTTAGGTTCATATGCTGTTCAGGGTCCTGGACCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: IWDLSNPFKFQIYLS*GFRFICCSGSWTFN Trigger: ATTGAAGGTCCAGGACCCTGAACAGCATATGAACCTAAAACCCAAACTTAGGTATATCTGGAACTTGAATGGATTTGAGAGATCCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 72 bp | CTGCTTGATCCCTGTAGCTGCCTGCCTCTGCTGAGCTaGCAGCACACAATCTTCCATAGCAAAGCCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: LLDPCSCLPLLS*QHTIFHSKARP Trigger: GGGCCTGGCTTTGCTATGGAAGATTGTGTGCTGTCAGCTCAGCAGAGGCAGGCAGCTACAGGGATCAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | GGGCTTGACTCCTGCACCCAGGGTCCAATGGCATCTTaGGTCTTAGATCCAGGGCTCATAAAGCCCTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GLDSCTQGPMAS*VLDPGLIKPFG Trigger: TCCAAAGGGCTTTATGAGCCCTGGATCTAAGACCCAAGATGCCATTGGACCCTGGGTGCAGGAGTCAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACTCTGATATCTGGACCTaGCTGAGCTCTGAAAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: GALGSEVFLAPRVQSSMHSDIWT*LSSEKS Trigger: GCTCTTTTCAGAGCTCAGCAAGGTCCAGATATCAGA...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 72 bp | TCTGGGGTGCTAGGGAATTTGCGGGTCACTTGCACATaGACTGATGGCAATGTCTGTGGACTCTCAGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: SGVLGNLRVTCT*TDGNVCGLSGA Trigger: CGCTCCTGAGAGTCCACAGACATTGCCATCAGTTCATGTGCAAGTGACCCGCAAATTCCCTAGCACCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 72 bp | CCCTTTGGATTTGCTCTCGGGCTGAGAGTCAAGGAATaGAGGACCTGGGTTACCATGACCACCGCATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PFGFALGLRVKE*RTWVTMTTASS Trigger: AGAAGATGCGGTGGTCATGGTAACCCAGGTCCTTCATTCCTTGACTCTCAGCCCGAGAGCAAATCCAAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR TCA 72 bp | TGTCAGGCCAAAACCAATCCCAAAATTGTGAGGGCTTaGCTCCTGCACCCAGGGTCCAATGGCATCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: CQAKTNPKIVRA*LLHPGSNGILG Trigger: ACCCAAGATGCCATTGGACCCTGGGTGCAGGAGTCAAGCCCTCACAATTTTGGGATTGGTTTTGGCCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | AAAAGGTATGGAGAATCCAGAATTCAGGACTTCGGGTaGGCAGACACCCTGATGAAGCAGGGCCTCGGTATC | + |
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Preference number: 3 (lower is better) Translates to: KRYGESRIQDFG*ADTLMKQGLGI Trigger: GATACCGAGGCCCTGCTTCATCAGGGTGTCTGCCCACCCGAAGTCCTGAATTCTGGATTCTCCATACCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | TGGGCATTGCTAGGGCATTTCAGTTTTATGGGCCTCTaGATGGCAGGACATGGGAGACGGGGAAATCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: WALLGHFSFMGL*MAGHGRRGNQV Trigger: TACCTGATTTCCCCGTCTCCCATGTCCTGCCATCCAGAGGCCCATAAAACTGAAATGCCCTAGCAATGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | CAAGAACACCTGGAGCCTAACGGTGCTGAAAGACTGTaGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: QEHLEPNGAERL*HLVAECLWSEG Trigger: CCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGCACCGTTAGGCTCCAGGTGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR-3UTR CAA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGACAAATATTCATCCCTaGAACCCCCACAAGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: STSACPDTNKVTDWLGIKTNIHP*NPHKAT Trigger: GGTGGCCTTGTGGGGGTTCAAGGGATGAATATTTGT...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | ATCTTGGGTCTTAGATCCAGGGCTCATAAAGCCCTTTaGATTTGCTCTCGGGCTGAGAGTCAAGGAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: ILGLRSRAHKAL*ICSRAESQGMK Trigger: CTTCATTCCTTGACTCTCAGCCCGAGAGCAAATCCAAAGGGCTTTATGAGCCCTGGATCTAAGACCCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTaGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: AERLWHLVAECL*SEGIKVSGQNQ Trigger: TTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | ATCTCAGTCCTCAGTTTGGGGTCCAGGTACCAGATCTaGGATCTCTCAAATCCATTCAAGTTCCAGATATAC | + |
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Preference number: 3 (lower is better) Translates to: ISVLSLGSRYQI*DLSNPFKFQIY Trigger: GTATATCTGGAACTTGAATGGATTTGAGAGATCCCAGATCTGGTACCTGGACCCCAAACTGAGGACTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | ATTCATCCCTTGAACCCCCACAAGGCCACCCAAGTCTaGGTAATGAAAAATGATTCAAGTGTACATTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IHPLNPHKATQV*VMKNDSSVHSQ Trigger: CTGGGAATGTACACTTGAATCATTTTTCATTACCCAGACTTGGGTGGCCTTGTGGGGGTTCAAGGGATGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | TTCATATGCTGTTCAGGGTCCTGGACCTTCAATTTTTaGGTCTTCAGACCGATTTCCAAACCAGCTCAACAA | + |
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Preference number: 3 (lower is better) Translates to: FICCSGSWTFNF*VFRPISKPAQQ Trigger: TTGTTGAGCTGGTTTGGAAATCGGTCTGAAGACCCAAAAATTGAAGGTCCAGGACCCTGAACAGCATATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CCA 72 bp | TCATTAGTCTACAAGTACTTTGAATTCAAGAACACCTaGAGCCTAACGGTGCTGAAAGACTGTGGCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: SLVYKYFEFKNT*SLTVLKDCGIL Trigger: CAAGATGCCACAGTCTTTCAGCACCGTTAGGCTCCAGGTGTTCTTGAATTCAAAGTACTTGTAGACTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR GCA 72 bp | TTCCAGATATACCTAAGTTTGGGTTTTAGGTTCATATaGTGTTCAGGGTCCTGGACCTTCAATTTTTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: FQIYLSLGFRFI*CSGSWTFNFWV Trigger: GACCCAAAAATTGAAGGTCCAGGACCCTGAACAGCATATGAACCTAAAACCCAAACTTAGGTATATCTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGGAAAAGGTATGGAGAATCCAGAATTCAGGACTTCGGGTGGGCAGACCGTGCTGCAACCCAGTaGCAGGCGCGCAGGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SVGKRYGESRIQDFGWADRAATQ*QARRGA Trigger: TGCGCCCCTGCGCGCCTGTCACTGGGTTGCAGCACG...GTCTGCCCACCCGAAGTCCTGAATTCTGGATTCTCCATACCTTTTCCCCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR GCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCCCTCATAGCCGCGGCTaGCCCAGCCCTGGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPPHSRG*PSPGSL Trigger: CAGGGAGCCAGGGCTGGGGCAGCCGCGGCTATGAGG...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCGCCTGGACCTGGGGGTaGACGAGCAGGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPAWTWG*TSRGCW Trigger: CCAGCACCCCCTGCTCGTCCACCCCCAGGTCCAGGC...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAGCCGCTCCCCGTGGATaGCGTAGTGCCCCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKAAPRG*RSAPGG Trigger: CCCGCCAGGGGCACTACGTCATCCACGGGGAGCGGC...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | GGAGCTCTAGGATCTGAGGTCTTCCTGGCTCCCAGGGTTCAGTCCTCCATGCACGCTTCTGCAGGACTCTaGAACGTCAGCCCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GALGSEVFLAPRVQSSMHASAGL*NVSPNL Trigger: CAAGTTTGGGCTGACGTTTCAGAGTCCTGCAGAAGC...GTGCATGGAGGACTGAACCCTGGGAGCCAGGAAGACCTCAGATCCTAGAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TCTCGGGCTGAGAGTCAAGGAATGAAGGACCTGGGTTACCATGACCACCGCATCCTGCTGACTCCACTGTaGCAATGGGAGCTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAESQGMKDLGYHDHRILLTPL*QWELWE Trigger: CTCCCACAGCTCCCATTGCCACAGTGGAGTCAGCAG...GATGCGGTGGTCATGGTAACCCAGGTCCTTCATTCCTTGACTCTCAGCCCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGGCCTTTGTGGGGGCGTaGCCAGTGGGAAGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQGRDLNVLGVIVWEICKAFVGA*PVGRQL Trigger: CAGCTGCCTTCCCACTGGCCACGCCCCCACAAAGGC...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TCCACATCAGCCTGCCCTGACACTAACAAGGTTACAGACTGGCTTGGAATCAAGACGAGCAGGGGGTGCTaGGGGTGCAGCCTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STSACPDTNKVTDWLGIKTSRGC*GCSLCE Trigger: CTCACAGAGGCTGCACCCCCAGCACCCCCTGCTCGT...CTTGATTCCAAGCCAGTCTGTAACCTTGTTAGTGTCAGGGCAGGCTGATGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR GCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCTGGAGGACCCAGGGCTaGACCCCGCAATGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPWRTQG*TPQCTS Trigger: ACTGGTGCATTGCGGGGTGCAGCCCTGGGTCCTCCA...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAATGGGTCAGGGGCCTCTaGGCAGCGACCACCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKWVRGL*AATTTP Trigger: GGGCGTGGTGGTCGCTGCGCAGAGGCCCCTGACCCA...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGRDLNVLGVIVWEICKPGGCD*RRSRCP Trigger: TGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGG...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGGGAAAAGGTATGGAGAATCCAGAATTCAGGACTTCGGGTGGGCAGACAGACAGGGCAAGAGGTaGAGGCGGTGGTCCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SVGKRYGESRIQDFGWADRQGKR*RRWSRS Trigger: CGATCTGGACCACCGCCTCCACCTCTTGCCCTGTCT...GTCTGCCCACCCGAAGTCCTGAATTCTGGATTCTCCATACCTTTTCCCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS-3UTR GCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGAAGAGTGCTCGGCAGTaGACACAGCGTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGRDLNVLGVIVWEICKKSARQ*TQRAAS Trigger: GGAGGCTGCACGCTGTGTGCACTGCCGAGCACTCTT...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGTGGCAATGGGAGCTGTaGGAGGAGTCTCCTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AERLWHLVAECLWSEGIKWQWEL*EESPGG Trigger: GCCGCCAGGAGACTCCTCCCACAGCTCCCATTGCCA...CTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | AAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTGCAGCAGGGCGTGGGTaGCCTGGCTCACAAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KDCGILLLNVSGLKGSRCAAGRG*PGSQAH Trigger: GTGTGCTTGTGAGCCAGGCCACCCACGCCCTGCTGC...ACACCTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAGTCTCCTGGCGGCTGTaGCTGGAGGAGGAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKVSWRL*LEEESL Trigger: CAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGAC...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTCACCCTCGGCGTCTaGCAGGCAGTGGTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AERLWHLVAECLWSEGIKVTLGV*QAVVQQ Trigger: TTGCTGTACCACTGCCTGTCAGACGCCGAGGGTGAC...CTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR GCA 90 bp | TCACAGGGGAGGGACCTGAATGTACTAGGGGTTATAGTGTGGGAAATCTGCAAGACAGAGACAGGGCACTaGCAGAGACAGAGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGRDLNVLGVIVWEICKTETGH*QRQSSQ Trigger: CTGGCTGCTCTGTCTCTGGCAGTGCCCTGTCTCTGT...CTTGCAGATTTCCCACACTATAACCCCTAGTACATTCAGGTCCCTCCCCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TTGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGTCAGGCCAAAACCAATCCCGCGTCTGACAGGCAGTaGTACAGCAAGCTCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNVSGLKGSRCQAKTNPASDRQ*YSKLSA Trigger: TGCCGAGAGCTTGCTGTACCACTGCCTGTCAGACGC...GGGATTGGTTTTGGCCTGACACCTTGATCCCTTCAGACCAGAGACATTCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TCTCGGGCTGAGAGTCAAGGAATGAAGGACCTGGGTTACCATGACCACCGCATCCCCAAGCTCCAATGGTaGAAGATGGGATTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAESQGMKDLGYHDHRIPKLQW*KMGFTL Trigger: CAAAGTGAATCCCATCTTCCACCATTGGAGCTTGGG...GATGCGGTGGTCATGGTAACCCAGGTCCTTCATTCCTTGACTCTCAGCCCGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAAGCCTCCTCAGCCTCTaGGGAGGCTTTGGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKSLLSL*GGFGWS Trigger: GCTCCAGCCAAAGCCTCCCCAGAGGCTGAGGAGGCT...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS-3UTR CCA 90 bp | GTCCTCTGGTCTCAAGGTCTAAGTCATTTGATAATAGTGTCAAGTTTGAGTAACCGTGCAGCCTCCTCGTaGCGACCCCCACAGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLWSQGLSHLIIVSSLSNRAASS*RPPQPA Trigger: TGCGGGCTGTGGGGGTCGCCACGAGGAGGCTGCACG...GTTACTCAAACTTGACACTATTATCAAATGACTTAGACCTTGAGACCAGAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CAA 72 bp | TGGAGCCTAACGGTGCTGAAAGACTGTGGCATCTTGTaGCTGAATGTCTCTGGTCTGAAGGGATCAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLTVLKDCGIL*LNVSGLKGSRC Trigger: ACACCTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGCACCGTTAGGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAACTCCACTGTGGCAATaGGAGCTGTGGGAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKTPLWQ*ELWEES Trigger: AGACTCCTCCCACAGCTCCCATTGCCACAGTGGAGT...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | GTCCTCTGGTCTCAAGGTCTAAGTCATTTGATAATAGTGTCAAGTTTGAGTAACTGGGAAGGCAGCTGCTaGCTCCACTGTGGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLWSQGLSHLIIVSSLSNWEGSC*LHCGNG Trigger: CCCATTGCCACAGTGGAGTCAGCAGCTGCCTTCCCA...GTTACTCAAACTTGACACTATTATCAAATGACTTAGACCTTGAGACCAGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR GCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAGAACTCATCCGCTTCTaGAGGACTCTGAAACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKELIRF*RTLKRQ Trigger: CTGACGTTTCAGAGTCCTGCAGAAGCGGATGAGTTC...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR TCA 90 bp | GTCCTCTGGTCTCAAGGTCTAAGTCATTTGATAATAGTGTCAAGTTTGAGTAACGTTCAGGAATCCCAGTaGACGGTAGAAGCGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLWSQGLSHLIIVSSLSNVQESQ*TVEAEG Trigger: ACCCTCCGCTTCTACCGTTCACTGGGATTCCTGAAC...GTTACTCAAACTTGACACTATTATCAAATGACTTAGACCTTGAGACCAGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATACCAGGTCTCAGGTGAAAGTTGTAAACCAAACCTaGCCTCAGGGTACACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HPGAIRASKCEDTRSQVKVVNQT*PQGTLQ Trigger: TTGGAGTGTACCCTGAGGCCAGGTTTGGTTTACAAC...TTTCACCTGAGACCTGGTATCTTCACATTTAGATGCTCTTATAGCCCCAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS-3UTR CCA 90 bp | TATCTGGTGATTCCAAACCATCCTGGGGCTATAAGAGCATCTAAATGTGAAGATTCCCCCAAGCTCCAATaGTGGAAGATGGGATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: YLVIPNHPGAIRASKCEDSPKLQ*WKMGFT Trigger: AGTGAATCCCATCTTCCACCATTGGAGCTTGGGGGA...ATCTTCACATTTAGATGCTCTTATAGCCCCAGGATGGTTTGGAATCACCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| 3UTR CAA 72 bp | CTCTCAAATCCATTCAAGTTCCAGATATACCTAAGTTaGGGTTTTAGGTTCATATGCTGTTCAGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSNPFKFQIYLS*GFRFICCSGSW Trigger: CCAGGACCCTGAACAGCATATGAACCTAAAACCCAAACTTAGGTATATCTGGAACTTGAATGGATTTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 90 bp | CTCTGCGCAGCGACCACCACGCCCATCTGCCCGGCGGCGGAAGAGTaGTCGGCAGTGCACACAGCGTGCAGCCTCCTCAGCCTCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCAATTTPICPAAEE*SAVHTACSLLSLWG Trigger: TCCCCAGAGGCTGAGGAGGCTGCACGCTGTGTGCACTGCCGAGCACTCTTCCGCCGCCGGGCAGATGGGCGTGGTGGTCGCTGCGCAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 90 bp | CCCATCTGCCCGGCGGCGGAAGAGTGCTCGGCAGTGCACACAGCGTaGAGCCTCCTCAGCCTCTGGGGAGGCTTTGGCTGGAGCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PICPAAEECSAVHTA*SLLSLWGGFGWSRG Trigger: ACCCCTGCTCCAGCCAAAGCCTCCCCAGAGGCTGAGGAGGCTGCACGCTGTGTGCACTGCCGAGCACTCTTCCGCCGCCGGGCAGATGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 90 bp | CCAGTGACAGGCGCGCAGGGGCGCATAACAACAGAGACAGGGCACTaGCAGAGACAGAGCAGCCAGAGCAGCCCAGCGCGCAGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PVTGAQGRITTETGH*QRQSSQSSPARSRA Trigger: CGCCCTGCTGCGCGCTGGGCTGCTCTGGCTGCTCTGTCTCTGGCAGTGCCCTGTCTCTGTTGTTATGCGCCCCTGCGCGCCTGTCACTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS TCA 90 bp | CTGACAGGCAGTGGTACAGCAAGCTCTCGGCACACCACAAGCAGCTaGGCCGGCGCACTAGCAGGCGACCTGGGTCAGGGGCCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTGSGTASSRHTTSS*AGALAGDLGQGPLR Trigger: GCGCAGAGGCCCCTGACCCAGGTCGCCTGCTAGTGCGCCGGCTCAGCTGCTTGTGGTGTGCCGAGAGCTTGCTGTACCACTGCCTGTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 90 bp | TGCAGCCTCCTCGTGGCGACCCCCACAGCCCGCACAGCCACAACGTaGTGCAACCCAGTGACAGGCGCGCAGGGGCGCATAACAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLLVATPTARTATT*CNPVTGAQGRITTE Trigger: CTCTGTTGTTATGCGCCCCTGCGCGCCTGTCACTGGGTTGCAGCACGTTGTGGCTGTGCGGGCTGTGGGGGTCGCCACGAGGAGGCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 90 bp | AGCCTCCTCGTGGCGACCCCCACAGCCCGCACAGCCACAACGTGCTaGAACCCAGTGACAGGCGCGCAGGGGCGCATAACAACAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLVATPTARTATTC*NPVTGAQGRITTET Trigger: TGTCTCTGTTGTTATGCGCCCCTGCGCGCCTGTCACTGGGTTGCAGCACGTTGTGGCTGTGCGGGCTGTGGGGGTCGCCACGAGGAGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 90 bp | CTGTGGCAATGGGAGCTGTGGGAGGAGTCTCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCACGTGGGACGTCAGAGGGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWQWELWEESPGGCD*RRSRCPRGTSEGRE Trigger: CTCCCTGCCCTCTGACGTCCCACGTGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGACTCCTCCCACAGCTCCCATTGCCACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 90 bp | CAAGCACACGGGTCCGAGAAGTCACCCTCGGCGTCTGACAGGCAGTaGTACAGCAAGCTCTCGGCACACCACAAGCAGCTGAGCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QAHGSEKSPSASDRQ*YSKLSAHHKQLSRR Trigger: GCGCCGGCTCAGCTGCTTGTGGTGTGCCGAGAGCTTGCTGTACCACTGCCTGTCAGACGCCGAGGGTGACTTCTCGGACCCGTGTGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS TCA 90 bp | GCCTGGCTCACAAGCACACGGGTCCGAGAAGTCACCCTCGGCGTCTaGCAGGCAGTGGTACAGCAAGCTCTCGGCACACCACAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWLTSTRVREVTLGV*QAVVQQALGTPQAA Trigger: AGCTGCTTGTGGTGTGCCGAGAGCTTGCTGTACCACTGCCTGTCAGACGCCGAGGGTGACTTCTCGGACCCGTGTGCTTGTGAGCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS CCA 90 bp | ACCAGTCTTGGCAAAGCGCACAACGCAGGTAGACAGGGCAAGAGGTaGAGGCGGTGGTCCAGATCGCCGGTAGTCCTCATAGCCGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLGKAHNAGRQGKR*RRWSRSPVVLIAAA Trigger: AGCCGCGGCTATGAGGACTACCGGCGATCTGGACCACCGCCTCCACCTCTTGCCCTGTCTACCTGCGTTGTGCGCTTTGCCAAGACTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS TCA 90 bp | GGCTCCCTGCCCCAGCTAAAGACTCTGAAGGTTCAGGAATCCCAGTaGACGGTAGAAGCGGAGGGTAGCTCTGAGCAGAGGAGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLPQLKTLKVQESQ*TVEAEGSSEQRSGA Trigger: GGCGCCGCTCCTCTGCTCAGAGCTACCCTCCGCTTCTACCGTTCACTGGGATTCCTGAACCTTCAGAGTCTTTAGCTGGGGCAGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS CCA 90 bp | CTGTCCACGTGGGACGTCAGAGGGCAGGGAGTCTCTGCAGTGTCCTaGGAAGGGGAGGAGGAGGAAGAGGAAGAGGAAGGAGTCAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSTWDVRGQGVSAVS*EGEEEEEEEEGVSE Trigger: TTCGCTGACTCCTTCCTCTTCCTCTTCCTCCTCCTCCCCTTCCCAGGACACTGCAGAGACTCCCTGCCCTCTGACGTCCCACGTGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS GCA 90 bp | GGCAGCCAGCGCAGCCAGCAGGCTCTTCTGGAACTCATCCGCTTCTaGAGGACTCTGAAACGTCAGCCCAAACTTGCAGTCCCCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSQRSQQALLELIRF*RTLKRQPKLAVPQA Trigger: AGCTTGGGGGACTGCAAGTTTGGGCTGACGTTTCAGAGTCCTGCAGAAGCGGATGAGTTCCAGAAGAGCCTGCTGGCTGCGCTGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS GCA 90 bp | GGAACTCATCCGCTTCTGCAGGACTCTGAAACGTCAGCCCAAACTTaGAGTCCCCCAAGCTCCAATGGTGGAAGATGGGATTCACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTHPLLQDSETSAQT*SPPSSNGGRWDSLC Trigger: ACAAAGTGAATCCCATCTTCCACCATTGGAGCTTGGGGGACTGCAAGTTTGGGCTGACGTTTCAGAGTCCTGCAGAAGCGGATGAGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS CCA 90 bp | GCTCCAATGGTGGAAGATGGGATTCACTTTGTTGTAAACCAAACCTaGCCTCAGGGTACACTCCAAGGTGGTTTTCTGGTCCCGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: APMVEDGIHFVVNQT*PQGTLQGGFLVPKP Trigger: CGGCTTCGGGACCAGAAAACCACCTTGGAGTGTACCCTGAGGCCAGGTTTGGTTTACAACAAAGTGAATCCCATCTTCCACCATTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS CCA 90 bp | ACGTCAGCCCAAACTTGCAGTCCCCCAAGCTCCAATGGTGGAAGATaGGATTCACTTTGTTGTAAACCAAACCTGGCCTCAGGGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: TSAQTCSPPSSNGGR*DSLCCKPNLASGYT Trigger: AGTGTACCCTGAGGCCAGGTTTGGTTTACAACAAAGTGAATCCCATCTTCCACCATTGGAGCTTGGGGGACTGCAAGTTTGGGCTGACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
||
| CDS-3UTR CAA 90 bp | GCTGAAAGACTGTGGCATCTTGTTGCTGAATGTCTCTGGTCTGAAGGGATCAAGAACGTCAGCCCAAACTaGCAGTCCCCCAAGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AERLWHLVAECLWSEGIKNVSPN*QSPKLQ Trigger: TTGGAGCTTGGGGGACTGCAAGTTTGGGCTGACGTT...CTTGATCCCTTCAGACCAGAGACATTCAGCAACAAGATGCCACAGTCTTTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | GTCAGGGGCCTCTGCGCAGCGACCACCACGCCCATCTaGCCGGCGGCGGAAGAGTGCTCGGCAGTGCACACA | + |
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Preference number: 6 (lower is better) Translates to: VRGLCAATTTPI*PAAEECSAVHT Trigger: TGTGTGCACTGCCGAGCACTCTTCCGCCGCCGGGCAGATGGGCGTGGTGGTCGCTGCGCAGAGGCCCCTGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | CCGGCGGCGGAAGAGTGCTCGGCAGTGCACACAGCGTaGAGCCTCCTCAGCCTCTGGGGAGGCTTTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PAAEECSAVHTA*SLLSLWGGFGW Trigger: CCAGCCAAAGCCTCCCCAGAGGCTGAGGAGGCTGCACGCTGTGTGCACTGCCGAGCACTCTTCCGCCGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | CTCGTGGCGACCCCCACAGCCCGCACAGCCACAACGTaGTGCAACCCAGTGACAGGCGCGCAGGGGCGCATA | + |
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Preference number: 6 (lower is better) Translates to: LVATPTARTATT*CNPVTGAQGRI Trigger: TATGCGCCCCTGCGCGCCTGTCACTGGGTTGCAGCACGTTGTGGCTGTGCGGGCTGTGGGGGTCGCCACGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | CAGAGCAGCCCAGCGCGCAGCAGGGCGTGGGTGGCCTaGCTCACAAGCACACGGGTCCGAGAAGTCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: QSSPARSRAWVA*LTSTRVREVTL Trigger: GAGGGTGACTTCTCGGACCCGTGTGCTTGTGAGCCAGGCCACCCACGCCCTGCTGCGCGCTGGGCTGCTCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | GTGGCGACCCCCACAGCCCGCACAGCCACAACGTGCTaGAACCCAGTGACAGGCGCGCAGGGGCGCATAACA | + |
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Preference number: 6 (lower is better) Translates to: VATPTARTATTC*NPVTGAQGRIT Trigger: TGTTATGCGCCCCTGCGCGCCTGTCACTGGGTTGCAGCACGTTGTGGCTGTGCGGGCTGTGGGGGTCGCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS TCA 72 bp | AGTGGTACAGCAAGCTCTCGGCACACCACAAGCAGCTaGGCCGGCGCACTAGCAGGCGACCTGGGTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGTASSRHTTSS*AGALAGDLGQG Trigger: CCCCTGACCCAGGTCGCCTGCTAGTGCGCCGGCTCAGCTGCTTGTGGTGTGCCGAGAGCTTGCTGTACCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | TGGGAGCTGTGGGAGGAGTCTCCTGGCGGCTGTGACTaGAGGAGGAGTCGCTGTCCACGTGGGACGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WELWEESPGGCD*RRSRCPRGTSE Trigger: CTCTGACGTCCCACGTGGACAGCGACTCCTCCTCCAGTCACAGCCGCCAGGAGACTCCTCCCACAGCTCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CAA 90 bp | AGTGACACTGGAGGACCCAGGGCTGCACCCCGCAATGCACCAGTCTaGGCAAAGCGCACAACGCAGGTAGACAGGGCAAGAGGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SDTGGPRAAPRNAPV*AKRTTQVDRARGGG Trigger: GCCTCCACCTCTTGCCCTGTCTACCTGCGTTGTGCGCTTTGCCAAGACTGGTGCATTGCGGGGTGCAGCCCTGGGTCCTCCAGTGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | GGGTCCGAGAAGTCACCCTCGGCGTCTGACAGGCAGTaGTACAGCAAGCTCTCGGCACACCACAAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSEKSPSASDRQ*YSKLSAHHKQL Trigger: CAGCTGCTTGTGGTGTGCCGAGAGCTTGCTGTACCACTGCCTGTCAGACGCCGAGGGTGACTTCTCGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CAA 72 bp | GGAGGACCCAGGGCTGCACCCCGCAATGCACCAGTCTaGGCAAAGCGCACAACGCAGGTAGACAGGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GGPRAAPRNAPV*AKRTTQVDRAR Trigger: TCTTGCCCTGTCTACCTGCGTTGTGCGCTTTGCCAAGACTGGTGCATTGCGGGGTGCAGCCCTGGGTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS TCA 72 bp | ACAAGCACACGGGTCCGAGAAGTCACCCTCGGCGTCTaGCAGGCAGTGGTACAGCAAGCTCTCGGCACACCA | + |
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Preference number: 6 (lower is better) Translates to: TSTRVREVTLGV*QAVVQQALGTP Trigger: TGGTGTGCCGAGAGCTTGCTGTACCACTGCCTGTCAGACGCCGAGGGTGACTTCTCGGACCCGTGTGCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | TGGGACGTCAGAGGGCAGGGAGTCTCTGCAGTGTCCTaGGAAGGGGAGGAGGAGGAAGAGGAAGAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: WDVRGQGVSAVS*EGEEEEEEEEG Trigger: TCCTTCCTCTTCCTCTTCCTCCTCCTCCCCTTCCCAGGACACTGCAGAGACTCCCTGCCCTCTGACGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | GGCAAAGCGCACAACGCAGGTAGACAGGGCAAGAGGTaGAGGCGGTGGTCCAGATCGCCGGTAGTCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: GKAHNAGRQGKR*RRWSRSPVVLI Trigger: TATGAGGACTACCGGCGATCTGGACCACCGCCTCCACCTCTTGCCCTGTCTACCTGCGTTGTGCGCTTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | CGCAGCCAGCAGGCTCTTCTGGAACTCATCCGCTTCTaGAGGACTCTGAAACGTCAGCCCAAACTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RSQQALLELIRF*RTLKRQPKLAV Trigger: GACTGCAAGTTTGGGCTGACGTTTCAGAGTCCTGCAGAAGCGGATGAGTTCCAGAAGAGCCTGCTGGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS TCA 72 bp | CCCCAGCTAAAGACTCTGAAGGTTCAGGAATCCCAGTaGACGGTAGAAGCGGAGGGTAGCTCTGAGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PQLKTLKVQESQ*TVEAEGSSEQR Trigger: CCTCTGCTCAGAGCTACCCTCCGCTTCTACCGTTCACTGGGATTCCTGAACCTTCAGAGTCTTTAGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS GCA 72 bp | CCGCTTCTGCAGGACTCTGAAACGTCAGCCCAAACTTaGAGTCCCCCAAGCTCCAATGGTGGAAGATGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PLLQDSETSAQT*SPPSSNGGRWD Trigger: ATCCCATCTTCCACCATTGGAGCTTGGGGGACTGCAAGTTTGGGCTGACGTTTCAGAGTCCTGCAGAAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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| CDS CCA 72 bp | CAAACTTGCAGTCCCCCAAGCTCCAATGGTGGAAGATaGGATTCACTTTGTTGTAAACCAAACCTGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QTCSPPSSNGGR*DSLCCKPNLAS Trigger: TGAGGCCAGGTTTGGTTTACAACAAAGTGAATCCCATCTTCCACCATTGGAGCTTGGGGGACTGCAAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048923.7 |
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