Pregenerated sensors for SPRED2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045671Ensembl transcript IDs: ENSMUST00000093298.12, ENSMUST00000093299.13, ENSMUST00000123036.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTATGTGGCTGACACAGGGGGCGGCAGCTACCCCAGGTTTGGAATaGTGTCACCAAGGGACCACAGAGCCTGGCCTCCTCTTATTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GMWLTQGAAATPGLE*CHQGTTEPGLLLLA Trigger: GGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTGCCGCCCCCTGTGTCAGCCACATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | CCAAGGGACCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTTaGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: PRDHRAWPPLIGLAF*SWKGTRERMGECAR Trigger: TCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | CTAGCCTTTTGGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGAGTaGGCAAGAGACAAGTTGCCCGTGGCCGTGGATGGAGAAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LAFWSWKGTRERMGE*ARDKLPVAVDGEAE Trigger: TTCTGCTTCTCCATCCACGGCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | GACCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTTaGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: DHRAWPPLIGLAFWS*KGTRERMGECARDK Trigger: CTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | ATAGGGGCACTTGAACGGAGGTTTAAGGAAACAGGATTAGTGTTGTaGTTGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: IGALERRFKETGLVL*LVERRGPEESPSGW Trigger: CCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAATCCTGTTTCCTTAAACCTCCGTTCAAGTGCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | TGGAATGATGTCACCAAGGGACCACAGAGCCTGGCCTCCTCTTATTaGCCTAGCCTTTTGGAGTTGGAAGGGAACCAGGGAGAGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: WNDVTKGPQSLASSY*PSLLELEGNQGEDG Trigger: CCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGTGACATCATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | AGCTACCCCAGGTTTGGAATGATGTCACCAAGGGACCACAGAGCCTaGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTTGGAAGGGAACC | + |
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Preference number: 1 (lower is better) Translates to: SYPRFGMMSPRDHRA*PPLIGLAFWSWKGT Trigger: GGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | ACCAACACTCAGCACGATTATAGGCTGGTAAAATACACGAGTCTATaGCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGGGGGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: TNTQHDYRLVKYTSL*RRLLSSEHCERGYV Trigger: CACATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCTATAATCGTGCTGAGTGTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | ATTTTTCGGGTCAACTGGGCAAGCTCACAGAAACCCAAATCGCCTTaGAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAATTCT | + |
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Preference number: 1 (lower is better) Translates to: IFRVNWASSQKPKSP*KPWSKRMQSNSRNS Trigger: AGAATTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGACCCGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | GTCAACTGGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTaGTCCAAGAGGATGCAAAGCAACTCGAGGAATTCTTTCCTGATT | + |
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Preference number: 1 (lower is better) Translates to: VNWASSQKPKSPCKP*SKRMQSNSRNSFLI Trigger: AATCAGGAAAGAATTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | TCAGTTGGTGACCTACCCTTATCTGTGCACCCCAAGTGGCAACTGTaGGTGTGGAGTGATAGAAGAAGACACTTAGGCATTGAAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: SVGDLPLSVHPKWQL*VWSDRRRHLGIERG Trigger: CCCTCTTTCAATGCCTAAGTGTCTTCTTCTATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATAAGGGTAGGTCACCAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR CCA 90 bp | AGAAGTGGCAATGCAATTCTAAAAAGTCCTATTTTTCGGGTCAACTaGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RSGNAILKSPIFRVN*ASSQKPKSPCKPWS Trigger: GGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGACCCGAAAAATAGGACTTTTTAGAATTGCATTGCCACTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | GGAGACGTGGCATTAGGGGTTAAAGTACTACTGTTTTGTGGTACATaGTTGCTATCCAGATTGCCTCCTCACATAACAACATGCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GDVALGVKVLLFCGT*LLSRLPPHITTCCG Trigger: ACCACAGCATGTTGTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACTTTAACCCCTAATGCCACGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | TATTTACATAAATGTCCCCATGGCTGTCTTTGTGCCCTTAACTGCTaGCTTCACAAACCAAAGATAGGTGATGCACAGAGGCGTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: YLHKCPHGCLCALNC*LHKPKIGDAQRREI Trigger: GATCTCACGCCTCTGTGCATCACCTATCTTTGGTTTGTGAAGGCAGCAGTTAAGGGCACAAAGACAGCCATGGGGACATTTATGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR GCA 90 bp | ACATATTTACATAAATGTCCCCATGGCTGTCTTTGTGCCCTTAACTaGTGCCTTCACAAACCAAAGATAGGTGATGCACAGAGGCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: TYLHKCPHGCLCALN*CLHKPKIGDAQRRE Trigger: CTCACGCCTCTGTGCATCACCTATCTTTGGTTTGTGAAGGCAGCAGTTAAGGGCACAAAGACAGCCATGGGGACATTTATGTAAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR TCA 90 bp | ATACAGGTAAATGAGTTATGCTTCAGGCACTTTGACTTGTTAATGTaGGCGAATAGCTTGGGACGAGAGCTAAGGAAACTTCTGAACGGG | + |
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Preference number: 1 (lower is better) Translates to: IQVNELCFRHFDLLM*ANSLGRELRKLLNG Trigger: CCCGTTCAGAAGTTTCCTTAGCTCTCGTCCCAAGCTATTCGCTCACATTAACAAGTCAAAGTGCCTGAAGCATAACTCATTTACCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | TGGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTaGCCCGTGGCCGTGGATGGAGAAGCAGAAAGTAGGGGAACCGAG | + |
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Preference number: 2 (lower is better) Translates to: WKGTRERMGECARDK*PVAVDGEAESRGTE Trigger: CTCGGTTCCCCTACTTTCTGCTTCTCCATCCACGGCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | GGCGTGAGATCCACTGGCATAACCCTTAGGAGGGTGGGAACCGGCTGGGAGGAAGAGAGGATGGGGGAGTaGGCAAGAGACAAGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GVRSTGITLRRVGTGWEEERMGE*ARDKLP Trigger: GGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTC...TTCCTCCCAGCCGGTTCCCACCCTCCTAAGGGTTATGCCAGTGGATCTCACGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCAGCTACCCCAGGTTTGGAATGATGTCACCAAGGGACCACAGAGCCTGGAACCAGGGAGAGGATaGGGGAGTGCGCAAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GRQLPQVWNDVTKGPQSLEPGRG*GSAQET Trigger: TGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTC...CAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTGCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | ACCAAGGGACCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTaGGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TKGPQSLASSYWPSL*ELEGNQGEDGGVRK Trigger: CTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGTTGTGCTTGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGGAGGGACCACAGAGCCTaGCCTCCTCTTATTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: LVLCLVERRGPEESPSGWRDHRA*PPLIGL Trigger: TAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCT...CCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | GGACCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTaGGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GPQSLASSYWPSLLE*EGNQGEDGGVRKRQ Trigger: TTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | GGGGCACTTGAACGGAGGTTTAAGGAAACAGGATTAGTGTTGTGCTaGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GALERRFKETGLVLC*VERRGPEESPSGWG Trigger: TCCCCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAATCCTGTTTCCTTAAACCTCCGTTCAAGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCGAGAGGATGGGGGAGTaGGCAAGAGACAAGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GQAHRNPNRLASPGPRGCERMGE*ARDKLP Trigger: GGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTC...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | GGCGTGAGATCCACTGGCATAACCCTTAGGAGGGTGGGAACCGGCTGGGAGGAACTTTCCTCAGAACACTaGGAGAGGGGGTATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GVRSTGITLRRVGTGWEELSSEH*ERGYVA Trigger: AGCCACATACCCCCTCTCGCAGTGTTCTGAGGAAAG...TTCCTCCCAGCCGGTTCCCACCCTCCTAAGGGTTATGCCAGTGGATCTCACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | GAGACACGACAGGCTGTCTGTCGGGCGAGCAGAAAGCACTGCCAGGAAGAGACATCGCCTTGCAAGCCCTaGTCCAAGAGGATGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ETRQAVCRASRKHCQEETSPCKP*SKRMQS Trigger: GCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGA...TGTCTCTTCCTGGCAGTGCTTTCTGCTCGCCCGACAGACAGCCTGTCGTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | GAGACACGACAGGCTGTCTGTCGGGCGAGCAGAAAGCACTGCCAGGAAGAGACAAGTTGCCCGTGGCCGTaGATGGAGAAGCAGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: ETRQAVCRASRKHCQEETSCPWP*MEKQKV Trigger: TACTTTCTGCTTCTCCATCCACGGCCACGGGCAACT...TGTCTCTTCCTGGCAGTGCTTTCTGCTCGCCCGACAGACAGCCTGTCGTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCGCAGAACCAGAAAGGTaGGAAGGAGGGGCAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GQAHRNPNRLASPGPRGCAEPER*EGGAGN Trigger: GTTTCCTGCCCCTCCTTCCCACCTTTCTGGTTCTGC...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAAGACAAAACCGGCAGCTaGTGGGGAGACGTGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: TQIALQALVQEDAKQLEEDKTGS*WGDVAL Trigger: TAATGCCACGTCTCCCCATCAGCTGCCGGTTTTGTC...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAAAGTTGCCCGTGGCCGTaGATGGAGAAGCAGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TQIALQALVQEDAKQLEESCPWP*MEKQKV Trigger: TACTTTCTGCTTCTCCATCCACGGCCACGGGCAACT...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAAGGGACCACAGAGCCTaGCCTCCTCTTATTGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QAHRNPNRLASPGPRGCKRDHRA*PPLIGL Trigger: TAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCT...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAACCCCAGGTTTGGAATaGTGTCACCAAGGGACCACA | + |
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Preference number: 2 (lower is better) Translates to: QAHRNPNRLASPGPRGCKTPGLE*CHQGTT Trigger: TGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGT...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | TACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGGGGGTATCAGCTACCCCAGGTTTaGAATGATGTCACCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: YTSLCRRLLSSEHCERGYQLPQV*NDVTKG Trigger: TCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTG...ATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR TCA 90 bp | TATCTGTGCACCCCAAGTGGCAACTGTGGGTGTGGAGTGATAGAAGAAGACACTACCCCAGGTTTGGAATaGTGTCACCAAGGGACCACA | + |
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Preference number: 2 (lower is better) Translates to: YLCTPSGNCGCGVIEEDTTPGLE*CHQGTT Trigger: TGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGT...AGTGTCTTCTTCTATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGCTTTCCTCAGAACACTaGGAGAGGGGGTATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FCHISVGPMLVSDRQTQWLSSEH*ERGYVA Trigger: AGCCACATACCCCCTCTCGCAGTGTTCTGAGGAAAG...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | TATTTTTCGGGTCAACTGGGCAAGCTCACAGAAACCCAAATCGCCTaGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: YFSGQLGKLTETQIA*QALVQEDAKQLEEF Trigger: GAATTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGACCCGAAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | TATCTGTGCACCCCAAGTGGCAACTGTGGGTGTGGAGTGATAGAAGAAGACACTAAACCCCTCCAAGTCTaGAGAACCAGAAAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YLCTPSGNCGCGVIEEDTKPLQV*RTRKVG Trigger: TCCCACCTTTCTGGTTCTGCAGACTTGGAGGGGTTT...AGTGTCTTCTTCTATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTGAACCAGGGAGAGGATaGGGGAGTGCGCAAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: TLKNIVQGREWLQLHSQLEPGRG*GSAQET Trigger: TGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTC...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGGTTTTAGTATACAGGTAAATGAGTTATGCTTCAGGCACTTTGACTTGGAGAGTCCCTCAGGCTaGGGACAGTCTCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: NRGFSIQVNELCFRHFDLESPSG*GQSLHS Trigger: GCTGTGGAGAGACTGTCCCCAGCCTGAGGGACTCTC...CAAGTCAAAGTGCCTGAAGCATAACTCATTTACCTGTATACTAAAACCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | GACGTGGCATTAGGGGTTAAAGTACTACTGTTTTGTGGTACATGCTaGCTATCCAGATTGCCTCCTCACATAACAACATGCTGTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: DVALGVKVLLFCGTC*LSRLPPHITTCCGA Trigger: GGCACCACAGCATGTTGTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACTTTAACCCCTAATGCCACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR CAA 90 bp | GGGGTTAAAGTACTACTGTTTTGTGGTACATGCTTGCTATCCAGATaGCCTCCTCACATAACAACATGCTGTGGTGCCGGCTTCATCATT | + |
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Preference number: 2 (lower is better) Translates to: GVKVLLFCGTCLLSR*PPHITTCCGAGFII Trigger: AATGATGAAGCCGGCACCACAGCATGTTGTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACTTTAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTATTGGCCTAGCCTTTTaGAGTTGGAAGGGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLKNIVQGREWLQLHSQLIGLAF*SWKGTR Trigger: CCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAAT...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR CCA 90 bp | GACTGGGAAAATACTACACACCGTTCAGCTGCAGTGTGGCAATTAAACATATTTATTGGCCTAGCCTTTTaGAGTTGGAAGGGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: DWENTTHRSAAVWQLNIFIGLAF*SWKGTR Trigger: CCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAAT...AAATATGTTTAATTGCCACACTGCAGCTGAACGGTGTGTAGTATTTTCCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTTTTGTGGTACATGCTTaGTATCCAGATTGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TLKNIVQGREWLQLHSQLFVVHA*YPDCLL Trigger: GAGGAGGCAATCTGGATAGCAAGCATGTACCACAAA...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGGTTTTAGTATACAGGTAAATGAGTTATGCTTCAGGCACTTTGACTTGACATTAGGAGCCTCTTaGATGGCTCAGAGACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: NRGFSIQVNELCFRHFDLTLGAS*MAQRQA Trigger: TGCCTGTCTCTGAGCCATGCAAGAGGCTCCTAATGT...CAAGTCAAAGTGCCTGAAGCATAACTCATTTACCTGTATACTAAAACCCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR-3UTR CCA 90 bp | GCTACAACTTCATTCACAACTTCTGTGTTTTTCATCTGGAACTTGTTCACAGAACTAGCCTTTTGGAGTTaGAAGGGAACCAGGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ATTSFTTSVFFIWNLFTELAFWS*KGTRER Trigger: CCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAG...TTCTGTGAACAAGTTCCAGATGAAAAACACAGAAGTTGTGAATGAAGTTGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTCTGTTTTGTGGTACATaGTTGCTATCCAGATTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLKNIVQGREWLQLHSQLLFCGT*LLSRLP Trigger: AGGCAATCTGGATAGCAAGCATGTACCACAAAACAG...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTCGAGGAATTCTTTCCTaGTTCTCACAAGTGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: TLKNIVQGREWLQLHSQLRGILS*FSQVNM Trigger: CATATTCACTTGTGAGAATCAGGAAAGAATTCCTCG...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR-3UTR CCA 90 bp | GACTGGGAAAATACTACACACCGTTCAGCTGCAGTGTGGCAATTAAACATATTTAGTACTACTGTTTTGTaGTACATGCTTGCTATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DWENTTHRSAAVWQLNIFSTTVL*YMLAIQ Trigger: CTGGATAGCAAGCATGTACCACAAAACAGTAGTACT...AAATATGTTTAATTGCCACACTGCAGCTGAACGGTGTGTAGTATTTTCCCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR TCA 72 bp | CTGACACAGGGGGCGGCAGCTACCCCAGGTTTGGAATaGTGTCACCAAGGGACCACAGAGCCTGGCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LTQGAAATPGLE*CHQGTTEPGLL Trigger: GAGGAGGCCAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTGCCGCCCCCTGTGTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | ACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTaGGAGAGGGGGTATGTGGCTGACACAGGGGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSLCRRLLSSEH*ERGYVADTGGG Trigger: GCCGCCCCCTGTGTCAGCCACATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GCTGGGGACAGTCTCTCCACAGCACTGGAGGGCGGCTaGAGGCAGTCTATAGAGTCTCCTAGCACAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: AGDSLSTALEGG*RQSIESPSTET Trigger: GGTCTCTGTGCTAGGAGACTCTATAGACTGCCTCCAGCCGCCCTCCAGTGCTGTGGAGAGACTGTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GCCTGGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTTaGAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWPPLIGLAFWS*KGTRERMGECA Trigger: TGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTGTTGTGCTTGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGGCCTAGCCTTTTGGAGTaGGAAGGGAACCAGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LVLCLVERRGPEESPSGWPSLLE*EGNQGE Trigger: CTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGG...CCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | CACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTTaGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HRAWPPLIGLAF*SWKGTRERMGE Trigger: CTCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GTCACCAAGGGACCACAGAGCCTGGCCTCCTCTTATTaGCCTAGCCTTTTGGAGTTGGAAGGGAACCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTKGPQSLASSY*PSLLELEGNQG Trigger: TCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | GTCAACTGGGCAAGCTCACAGAAACCCAAATCGCCTTaGAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: VNWASSQKPKSP*KPWSKRMQSNS Trigger: CGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | AGGTTTGGAATGATGTCACCAAGGGACCACAGAGCCTaGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RFGMMSPRDHRA*PPLIGLAFWSW Trigger: CCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | GACAGGCATAATCAGTTGGTGACCTACCCTTATCTGTaGACCCCAAGTGGCAACTGTGGGTGTGGAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: DRHNQLVTYPYL*TPSGNCGCGVI Trigger: TATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATAAGGGTAGGTCACCAACTGATTATGCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTaGTCCAAGAGGATGCAAAGCAACTCGAGGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASSQKPKSPCKP*SKRMQSNSRNS Trigger: AGAATTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCTATTGGCCTAGCCTTTaGGAGTTGGAAGGGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCYWPSL*ELEGNQ Trigger: CTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATA...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | CAGCACGATTATAGGCTGGTAAAATACACGAGTCTATaGCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QHDYRLVKYTSL*RRLLSSEHCER Trigger: CCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCTATAATCGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | ATCCAGATTGCCTCCTCACATAACAACATGCTGTGGTaGCGGCTTCATCATTCTGTCACATCTCTGTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQIASSHNNMLW*RLHHSVTSLWD Trigger: GTCCCACAGAGATGTGACAGAATGATGAAGCCGGCACCACAGCATGTTGTTATGTGAGGAGGCAATCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GCTATCCAGATTGCCTCCTCACATAACAACATGCTGTaGTGCCGGCTTCATCATTCTGTCACATCTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: AIQIASSHNNML*CRLHHSVTSLW Trigger: CCACAGAGATGTGACAGAATGATGAAGCCGGCACCACAGCATGTTGTTATGTGAGGAGGCAATCTGGATAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | GACCTACCCTTATCTGTGCACCCCAAGTGGCAACTGTaGGTGTGGAGTGATAGAAGAAGACACTTAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: DLPLSVHPKWQL*VWSDRRRHLGI Trigger: AATGCCTAAGTGTCTTCTTCTATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATAAGGGTAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR TCA 72 bp | ACAACAGATAGCCCCAATCAGTCATCCCAACAAAGATaGCACCTCCAACCTCCACGTAATGCACAAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: TTDSPNQSSQQR*HLQPPRNAQAC Trigger: GCATGCTTGTGCATTACGTGGAGGTTGGAGGTGTCATCTTTGTTGGGATGACTGATTGGGGCTATCTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | AAATGTCCCCATGGCTGTCTTTGTGCCCTTAACTGCTaGCTTCACAAACCAAAGATAGGTGATGCACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KCPHGCLCALNC*LHKPKIGDAQR Trigger: CCTCTGTGCATCACCTATCTTTGGTTTGTGAAGGCAGCAGTTAAGGGCACAAAGACAGCCATGGGGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR GCA 72 bp | CATAAATGTCCCCATGGCTGTCTTTGTGCCCTTAACTaGTGCCTTCACAAACCAAAGATAGGTGATGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: HKCPHGCLCALN*CLHKPKIGDAQ Trigger: CTGTGCATCACCTATCTTTGGTTTGTGAAGGCAGCAGTTAAGGGCACAAAGACAGCCATGGGGACATTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTTATTGGCCTAGCCTTTaGGAGTTGGAAGGGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLKNIVQGREWLQLHSQLYWPSL*ELEGNQ Trigger: CTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATA...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | AATGCAATTCTAAAAAGTCCTATTTTTCGGGTCAACTaGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NAILKSPIFRVN*ASSQKPKSPCK Trigger: CTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGACCCGAAAAATAGGACTTTTTAGAATTGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR TCA 72 bp | AATGAGTTATGCTTCAGGCACTTTGACTTGTTAATGTaGGCGAATAGCTTGGGACGAGAGCTAAGGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: NELCFRHFDLLM*ANSLGRELRKL Trigger: AAGTTTCCTTAGCTCTCGTCCCAAGCTATTCGCTCACATTAACAAGTCAAAGTGCCTGAAGCATAACTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | AAATGCACCCTGAAAAATATAGTGCAGGGCAGGGAATaGCTACAACTTCATTCACAACTTCTGTGTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KCTLKNIVQGRE*LQLHSQLLCFS Trigger: TGAAAAACACAGAAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGTGCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CCA 72 bp | ACGAGAGCTAAGGAAACTTCTGAACGGGAAACCTTTTaGTTAGGTTCTGTTACCATGGATATAAAAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TRAKETSERETF*LGSVTMDIKIK Trigger: TTTTATTTTTATATCCATGGTAACAGAACCTAACCAAAAGGTTTCCCGTTCAGAAGTTTCCTTAGCTCTCGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTTGCCCGTGGCCCCGCCTCCTTCCTGTaGGAACCATCCCCCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGNQGEDGGVRKRQVARGPASFL*EPSPAG Trigger: TCCAGCGGGGGATGGTTCCCACAGGAAGGAGGCGGG...GCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTGTGCTTGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGGGCGTCGGGCGCGTCTTaGCAGTGGCCCCTTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLCLVERRGPEESPSGWASGAS*QWPLRF Trigger: GAACCGAAGGGGCCACTGCCAAGACGCGCCCGACGC...CCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCACACGCCGACGCGACTaGTCCCGCCTCCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCTRRRD*SRLLPV Trigger: CACAGGAAGGAGGCGGGATCAGTCGCGTCGGCGTGT...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GGCGTGAGATCCACTGGCATAACCCTTAGGAGGGTGGGAACCGGCTGGGAGGAAGTCGCTCGCCATGGATaGGAAAGCCGCTTCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GVRSTGITLRRVGTGWEEVARHG*ESRFVR Trigger: ACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGAC...TTCCTCCCAGCCGGTTCCCACCCTCCTAAGGGTTATGCCAGTGGATCTCACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GAGACACGACAGGCTGTCTGTCGGGCGAGCAGAAAGCACTGCCAGGAAGAGACACATCTTCTGGGAAGGTaGCCTGGGGGTAGGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ETRQAVCRASRKHCQEETHLLGR*PGGRTA Trigger: CGCGGTCCTACCCCCAGGTCACCTTCCCAGAAGATG...TGTCTCTTCCTGGCAGTGCTTTCTGCTCGCCCGACAGACAGCCTGTCGTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCCCCGCCTCCTTCCTGTaGGAACCATCCCCCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCPASFL*EPSPAG Trigger: TCCAGCGGGGGATGGTTCCCACAGGAAGGAGGCGGG...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTGTGCTTGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCAGGCTGGTGGGGACTTCGCCCTTaGCGAAGCGCACGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLCLVERRGPEESPSGWWGLRP*RSARRS Trigger: ACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCA...CCAGCCTGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | GGGCGGCAGCTACCCCAGGTTTGGAATGATGTCACCAAGGGACCACAGAGCCTGCCGTTGCCTTCAGGGTaGATGACCTTACACACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRQLPQVWNDVTKGPQSLPLPSG*MTLHTP Trigger: CGGCGTGTGTAAGGTCATGCACCCTGAAGGCAACGG...CAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTGCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAAGCGTCGGGCGCGTCTTaGCAGTGGCCCCTTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQIALQALVQEDAKQLEEASGAS*QWPLRF Trigger: GAACCGAAGGGGCCACTGCCAAGACGCGCCCGACGC...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | ACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTaGCCCGTGGCCGTGGATGGAGAAGCAGAAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRERMGECARDK*PVAVDGEAESR Trigger: CCTACTTTCTGCTTCTCCATCCACGGCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAAACACGCCGACGCGACTaGTCCCGCCTCCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQIALQALVQEDAKQLEETRRRD*SRLLPV Trigger: CACAGGAAGGAGGCGGGATCAGTCGCGTCGGCGTGT...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTTGCCCGTGGCTACAGTGGTACAGCATaGTGTCCGCGCACCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: EGNQGEDGGVRKRQVARGYSGTA*CPRTTY Trigger: GTATGTGGTGCGCGGACAGCATGCTGTACCACTGTA...GCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | CACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGGGGGTATGTCACGCGGCGGCTTTGTaGTTCCCACCACAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HESMPKAPFLRTLREGVCHAAAL*FPPQHL Trigger: CAGGTGCTGTGGTGGGAAGCACAAAGCCGCCGCGTG...ACATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCTGGGGACTTCGCCCTTaGCGAAGCGCACGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCWGLRP*RSARRS Trigger: ACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCA...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGCGTGAGATCCACTGGCATAACCCTTAGGAGGGTGGGAACCGGCTGGGAGGAATTCTGTCGCTCGCCATaGATGAGAAAGCCGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GVRSTGITLRRVGTGWEEFCRSP*MRKPLR Trigger: ACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAA...TTCCTCCCAGCCGGTTCCCACCCTCCTAAGGGTTATGCCAGTGGATCTCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGATCACTCCACAGCGGTaGCAGGCCCGGAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCHISVGPMLVSDRQTQWITPQR*QARRGR Trigger: CCTGCCCCTCCGGGCCTGCCACCGCTGTGGAGTGAT...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCATCACTCCACAGCGGTaGCAGGCCCGGAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCITPQR*QARRGR Trigger: CCTGCCCCTCCGGGCCTGCCACCGCTGTGGAGTGAT...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | CCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTaGGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLASSYWPSL*ELEGNQGEDGG Trigger: TCCCCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTATTGGCCTAGCCTTTTGGAGTTGGAAGGGAACCAGGGAGAGGATGGGGGTGCTCACAGGACGTaGGGGAGGAGATTGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSYWPSLLELEGNQGEDGGAHRT*GRRLSS Trigger: CGAGGACAATCTCCTCCCCCACGTCCTGTGAGCACC...CCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCCATCTTCTGGGAAGGTaGCCTGGGGGTAGGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCHLLGR*PGGRTA Trigger: CGCGGTCCTACCCCCAGGTCACCTTCCCAGAAGATG...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | GAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTTGCCCGTGGCAAAGGCTCGTGCATCTaGAGGACTTTGGAAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGNQGEDGGVRKRQVARGKGSCI*RTLESK Trigger: CTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTT...GCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGGCGGCAGCTACCCCAGGTTTGGAATGATGTCACCAAGGGACCACAGAGCCTGACGTCGGATTGGCTTTaGTGTAGACCAAGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQLPQVWNDVTKGPQSLTSDWL*CRPSPF Trigger: GAAAGGACTTGGTCTACACCAAAGCCAATCCGACGT...CAGGCTCTGTGGTCCCTTGGTGACATCATTCCAAACCTGGGGTAGCTGCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGCGTGAGATCCACTGGCATAACCCTTAGGAGGGTGGGAACCGGCTGGGAGGAATTTCTGAAGATGGTGTaGGAGCAGGGACAGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GVRSTGITLRRVGTGWEEFLKMV*EQGQES Trigger: TGATTCCTGTCCCTGCTCCCACACCATCTTCAGAAA...TTCCTCCCAGCCGGTTCCCACCCTCCTAAGGGTTATGCCAGTGGATCTCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAACCGTTGCCTTCAGGGTaGATGACCTTACACACGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAHRNPNRLASPGPRGCKPLPSG*MTLHTP Trigger: CGGCGTGTGTAAGGTCATGCACCCTGAAGGCAACGG...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGACCACAGAGCCTGGCCTCCTCTTATTGGCCTAGCCTTTTGGAGTTGGGTCGGCTCCCTCTTCTaGGAGGAATTAGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PRDHRAWPPLIGLAFWSWVGSLF*EELEEL Trigger: CAGTTCTTCTAATTCCTCGCAGAAGAGGGAGCCGAC...CCAACTCCAAAAGGCTAGGCCAATAAGAGGAGGCCAGGCTCTGTGGTCCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGAGCTCACCCGGCGAATaGAAGTTCTCACGGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCHISVGPMLVSDRQTQWSSPGE*KFSRRR Trigger: CCGACGCCGTGAGAACTTGCATTCGCCGGGTGAGCT...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGGGTGCTCACAGGACGTaGGGGAGGAGATTGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCHISVGPMLVSDRQTQWGAHRT*GRRLSS Trigger: CGAGGACAATCTCCTCCCCCACGTCCTGTGAGCACC...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCGGTGGTAATGGTCCATaGGGTATGGGTCAAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCGGNGP*GMGQGY Trigger: ATACCCTTGACCCATACCCCATGGACCATTACCACC...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGGGTCGGACATACAGTaGTACAGCATGCTGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAHRNPNRLASPGPRGCKGSDIQ*YSMLSA Trigger: CGCGGACAGCATGCTGTACCACTGTATGTCCGACCC...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | GGTCAACTGGGCAAGCTCACAGAAACCCAAATCGCCTaGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLGKLTETQIA*QALVQEDAKQL Trigger: GAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCCAGTTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | GAACGGAGGTTTAAGGAAACAGGATTAGTGTTGTGCTaGGTAGAGAGGCGAGGGCCCGAGGAGAGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERRFKETGLVLC*VERRGPEESPS Trigger: TGAGGGACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAATCCTGTTTCCTTAAACCTCCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCGGAAGAGGAGGTCGTTaGACCTTCTATAAGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCGRGGR*TFYKVF Trigger: GAAGACCTTATAGAAGGTTCAACGACCTCCTCTTCC...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAATACAGTGGTACAGCATaGTGTCCGCGCACCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQIALQALVQEDAKQLEEYSGTA*CPRTTY Trigger: GTATGTGGTGCGCGGACAGCATGCTGTACCACTGTA...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | CACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGGGGGTATGTGGTGGTAATGGTCCATaGGGTATGGGTCAAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HESMPKAPFLRTLREGVCGGNGP*GMGQGY Trigger: ATACCCTTGACCCATACCCCATGGACCATTACCACC...ACATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | GCACTTGAACGGAGGTTTAAGGAAACAGGATTAGTGTaGTGCTTGGTAGAGAGGCGAGGGCCCGAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALERRFKETGLV*CLVERRGPEES Trigger: ACTCTCCTCGGGCCCTCGCCTCTCTACCAAGCACAACACTAATCCTGTTTCCTTAAACCTCCGTTCAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAGACCAAGTCCTTTCTaGCATAGCATTCCAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCRPSPF*HSIPIP Trigger: TGGTATTGGAATGCTATGTCAGAAAGGACTTGGTCT...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | ACCCTGAAAAATATAGTGCAGGGCAGGGAATGGCTACAACTTCATTCACAACTTCACGCGGCGGCTTTGTaGTTCCCACCACAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLKNIVQGREWLQLHSQLHAAAL*FPPQHL Trigger: CAGGTGCTGTGGTGGGAAGCACAAAGCCGCCGCGTG...AAGTTGTGAATGAAGTTGTAGCCATTCCCTGCCCTGCACTATATTTTTCAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAACTTCGTTATGGAGAGTaGAAGAGGAGGTCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQIALQALVQEDAKQLEELRYGE*KRRSLN Trigger: GTTCAACGACCTCCTCTTCCACTCTCCATAACGAAG...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCATGGTCCATGGGGTATaGGTCAAGGGTATAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQAHRNPNRLASPGPRGCMVHGV*VKGINL Trigger: AAGATTTATACCCTTGACCCATACCCCATGGACCAT...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATTGGCCTAGCCTTTTGGAGTTGGAAGGGAACCAGGGAGAGGATGGGAAAGGCTCGTGCATCTaGAGGACTTTGGAAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYWPSLLELEGNQGEDGKGSCI*RTLESK Trigger: CTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTT...CCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCCCTGTCAAAGGCTCGTaGATCTGCAGGACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCPVKGS*ICRTLE Trigger: TTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGG...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCAGCTCAGCTTCGTTATaGAGAGTGGAAGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCSSASL*RVEEEV Trigger: GACCTCCTCTTCCACTCTCCATAACGAAGCTGAGCT...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGAGCTCAGCTTCGTTATaGAGAGTGGAAGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCHISVGPMLVSDRQTQWSSASL*RVEEEV Trigger: GACCTCCTCTTCCACTCTCCATAACGAAGCTGAGCT...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGCTGCCTTACAGAAGCTaGGAGACCAAAGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCHISVGPMLVSDRQTQWLPYRS*ETKEMP Trigger: TGGCATCTCTTTGGTCTCCCAGCTTCTGTAAGGCAG...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | ACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAAGCAACTCGAGGAAGCATCTGCAGGACTTTaGAAAGTAAGTCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQIALQALVQEDAKQLEEASAGL*KVSPNF Trigger: GAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGC...TTCCTCGAGTTGCTTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTATTGGCCTAGCCTTTTGGAGTTGGAAGGGAACCAGGGAGAGGATGGGATGGTCCATGGGGTATaGGTCAAGGGTATAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSYWPSLLELEGNQGEDGMVHGV*VKGINL Trigger: AAGATTTATACCCTTGACCCATACCCCATGGACCAT...CCCATCCTCTCCCTGGTTCCCTTCCAACTCCAAAAGGCTAGGCCAATAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | AACAGGGGTTTTAGTATACAGGTAAATGAGTTATGCTTCAGGCACTTTGACTTGAGCTCACCCGGCGAATaGAAGTTCTCACGGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGFSIQVNELCFRHFDLSSPGE*KFSRRR Trigger: CCGACGCCGTGAGAACTTGCATTCGCCGGGTGAGCT...CAAGTCAAAGTGCCTGAAGCATAACTCATTTACCTGTATACTAAAACCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GCTACAACTTCATTCACAACTTCTGTGTTTTTCATCTGGAACTTGTTCACAGAAGTCGCTCGCCATGGATaGGAAAGCCGCTTCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATTSFTTSVFFIWNLFTEVARHG*ESRFVR Trigger: ACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGAC...TTCTGTGAACAAGTTCCAGATGAAAAACACAGAAGTTGTGAATGAAGTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | AGTACTACTGTTTTGTGGTACATGCTTGCTATCCAGATTGCCTCCTCACATAACTTCTGTCGCTCGCCATaGATGAGAAAGCCGCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: STTVLWYMLAIQIASSHNFCRSP*MRKPLR Trigger: ACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAA...GTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GCTACAACTTCATTCACAACTTCTGTGTTTTTCATCTGGAACTTGTTCACAGAAGGGTCGGACATACAGTaGTACAGCATGCTGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATTSFTTSVFFIWNLFTEGSDIQ*YSMLSA Trigger: CGCGGACAGCATGCTGTACCACTGTATGTCCGACCC...TTCTGTGAACAAGTTCCAGATGAAAAACACAGAAGTTGTGAATGAAGTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | AACAGGGGTTTTAGTATACAGGTAAATGAGTTATGCTTCAGGCACTTTGACTTGAGATGCCACTGTTTCTaGAGATGGTGTGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGFSIQVNELCFRHFDLRCHCF*RWCGSR Trigger: CCTGCTCCCACACCATCTTCAGAAACAGTGGCATCT...CAAGTCAAAGTGCCTGAAGCATAACTCATTTACCTGTATACTAAAACCCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR GCA 90 bp | GACTGGGAAAATACTACACACCGTTCAGCTGCAGTGTGGCAATTAAACATATTTGTCGGCTCCCTCTTCTaGGAGGAATTAGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DWENTTHRSAAVWQLNIFVGSLF*EELEEL Trigger: CAGTTCTTCTAATTCCTCGCAGAAGAGGGAGCCGAC...AAATATGTTTAATTGCCACACTGCAGCTGAACGGTGTGTAGTATTTTCCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | AGTACTACTGTTTTGTGGTACATGCTTGCTATCCAGATTGCCTCCTCACATAACCTTCGTTATGGAGAGTaGAAGAGGAGGTCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STTVLWYMLAIQIASSHNLRYGE*KRRSLN Trigger: GTTCAACGACCTCCTCTTCCACTCTCCATAACGAAG...GTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR TCA 90 bp | GACTGGGAAAATACTACACACCGTTCAGCTGCAGTGTGGCAATTAAACATATTTGGAAGAGGAGGTCGTTaGACCTTCTATAAGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DWENTTHRSAAVWQLNIFGRGGR*TFYKVF Trigger: GAAGACCTTATAGAAGGTTCAACGACCTCCTCTTCC...AAATATGTTTAATTGCCACACTGCAGCTGAACGGTGTGTAGTATTTTCCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| 3UTR CAA 72 bp | TTAGGGGTTAAAGTACTACTGTTTTGTGGTACATGCTaGCTATCCAGATTGCCTCCTCACATAACAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVKVLLFCGTC*LSRLPPHITTC Trigger: GCATGTTGTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACTTTAACCCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GACTGGGAAAATACTACACACCGTTCAGCTGCAGTGTGGCAATTAAACATATTTGCATCTGCAGGACTTTaGAAAGTAAGTCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DWENTTHRSAAVWQLNIFASAGL*KVSPNF Trigger: GAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGC...AAATATGTTTAATTGCCACACTGCAGCTGAACGGTGTGTAGTATTTTCCCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS-3UTR CCA 90 bp | GCTACAACTTCATTCACAACTTCTGTGTTTTTCATCTGGAACTTGTTCACAGAAGATGAAACGTCGGATTaGCTTTGGTGTAGACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATTSFTTSVFFIWNLFTEDETSD*LWCRPS Trigger: ACTTGGTCTACACCAAAGCCAATCCGACGTTTCATC...TTCTGTGAACAAGTTCCAGATGAAAAACACAGAAGTTGTGAATGAAGTTGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 90 bp | GGTACAGCATGCTGTCCGCGCACCACATACAGCTCACCCGGCGAATaGAAGTTCTCACGGCGTCGGGCGCGTCTTGGCAGTGGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTACCPRTTYSSPGE*KFSRRRARLGSGPF Trigger: GAAGGGGCCACTGCCAAGACGCGCCCGACGCCGTGAGAACTTGCATTCGCCGGGTGAGCTGTATGTGGTGCGCGGACAGCATGCTGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCGGCGTCGGGCGCGTCTaGGCAGTGGCCCCTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQAHRNPNRLASPGPRGCGVGRV*AVAPSV Trigger: AACCGAAGGGGCCACTGCCAAGACGCGCCCGACGCC...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS TCA 90 bp | CGTTCTCCTTCCGCCGACGGGACTTGGCCCTGGGCGGCTGTGTCTTaGTCACACTACCTTTGGGATCCTCCCCGAAGCCGAAGTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPSADGTWPWAAVS*SHYLWDPPRSRSPK Trigger: CTTCGGACTTCGGCTTCGGGGAGGATCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAAGGAGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 90 bp | CGCTCGCCATGGATGAGAAAGCCGCTTCGTCCGTTGCCTTCAGGGTaGATGACCTTACACACGCCGACGCGACTGATCCCGCCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPWMRKPLRPLPSG*MTLHTPTRLIPPPS Trigger: GGAAGGAGGCGGGATCAGTCGCGTCGGCGTGTGTAAGGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
||
| CDS-3UTR CAA 90 bp | CACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCGAGAGGGGGTATGTGGCGTCGGGCGCGTCTaGGCAGTGGCCCCTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HESMPKAPFLRTLREGVCGVGRV*AVAPSV Trigger: AACCGAAGGGGCCACTGCCAAGACGCGCCCGACGCC...ACATACCCCCTCTCGCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS TCA 90 bp | ACGGCGTCGGGCGCGTCTTGGCAGTGGCCCCTTCGGTTCTCTTCGTaGTTAAACATATCCCTGCAGTACACACACCGCGACCGTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TASGASWQWPLRFSS*LNISLQYTHRDRSP Trigger: CGGCGAACGGTCGCGGTGTGTGTACTGCAGGGATATGTTTAATCACGAAGAGAACCGAAGGGGCCACTGCCAAGACGCGCCCGACGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS CCA 90 bp | GGACTTCGCCCTTGGCGAAGCGCACGTAGGAGTCCGCGTCTTCTGTaGTGTCTAAGTATTTGCCGCGAACCGGCGCGTGCCGGTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLRPWRSARRSPRLL*CLSICREPARAGSL Trigger: AAGACTACCGGCACGCGCCGGTTCGCGGCAAATACTTAGACACCACAGAAGACGCGGACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS CCA 90 bp | GGACCGCGGCAACCGCTGGTCAGGGTGGTAATGGTCCATGGGGTATaGGTCAAGGGTATAAATCTTCCGGTGCTCACAGGACGTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPRQPLVRVVMVHGV*VKGINLPVLTGRGG Trigger: TCCCCCACGTCCTGTGAGCACCGGAAGATTTATACCCTTGACCCATACCCCATGGACCATTACCACCCTGACCAGCGGTTGCCGCGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CCA 90 bp | GGGGGTAGGACCGCGGCAACCGCTGGTCAGGGTGGTAATGGTCCATaGGGTATGGGTCAAGGGTATAAATCTTCCGGTGCTCACAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: GGRTAATAGQGGNGP*GMGQGYKSSGAHRT Trigger: CGTCCTGTGAGCACCGGAAGATTTATACCCTTGACCCATACCCCATGGACCATTACCACCCTGACCAGCGGTTGCCGCGGTCCTACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAATTCCGCCGACGGGACTaGGCCCTGGGCGGCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAHRNPNRLASPGPRGCKFRRRD*ALGGCV Trigger: GACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAA...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 90 bp | CGAAGCGCACGTAGGAGTCCGCGTCTTCTGTGGTGTCTAAGTATTTaGCGCGAACCGGCGCGTGCCGGTAGTCTTCATAACCGGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RSARRSPRLLWCLSI*REPARAGSLHNRSS Trigger: GGATGACCGGTTATGAAGACTACCGGCACGCGCCGGTTCGCGGCAAATACTTAGACACCACAGAAGACGCGGACTCCTACGTGCGCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 90 bp | GGTCAGTGTAGTCTCCCTCGGGGTCGGACATACAGTGGTACAGCATaGTGTCCGCGCACCACATACAGCTCACCCGGCGAATGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQCSLPRGRTYSGTA*CPRTTYSSPGECKF Trigger: GAACTTGCATTCGCCGGGTGAGCTGTATGTGGTGCGCGGACAGCATGCTGTACCACTGTATGTCCGACCCCGAGGGAGACTACACTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGTAAAATACACGAGTCTATGCCGAAGGCTCCTTTCCTCAGAACACTGCTTCCGCCGACGGGACTaGGCCCTGGGCGGCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLVKYTSLCRRLLSSEHCFRRRD*ALGGCV Trigger: GACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAA...GCAGTGTTCTGAGGAAAGGAGCCTTCGGCATAGACTCGTGTATTTTACCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | GAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTTGCCCGTGGCTCCAATACCACCAGTTaGTCTTTCTGTCGCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGNQGEDGGVRKRQVARGSNTTS*SFCRSP Trigger: TGGCGAGCGACAGAAAGACAAACTGGTGGTATTGGA...GCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093298.12 |
||
| CDS-3UTR CAA 90 bp | GAAGGGAACCAGGGAGAGGATGGGGGAGTGCGCAAGAGACAAGTTGCCCGTGGCAAAACTTCTCATCGCTaGTGTCACACGAACAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGNQGEDGGVRKRQVARGKTSHR*CHTNKG Trigger: ACCCTTGTTCGTGTGACACAAGCGATGAGAAGTTTT...GCCACGGGCAACTTGTCTCTTGCGCACTCCCCCATCCTCTCCCTGGTTCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 90 bp | CAGGACGTGGGGGAGGAGATTGTCCTCGTAGTCGGCTCCCTCTTCTaGGAGGAATTAGAAGAACTGTCCGTAGCTGTCGTGAAAACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDVGEEIVLVVGSLF*EELEELSVAVVKTS Trigger: TGACGTTTTCACGACAGCTACGGACAGTTCTTCTAATTCCTCGCAGAAGAGGGAGCCGACTACGAGGACAATCTCCTCCCCCACGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 90 bp | GGGACAGGAATCAGAACTTCCAGTTTGTCTTTCTGTCGCTCGCCATaGATGAGAAAGCCGCTTCGTCCGTTGCCTTCAGGGTGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GTGIRTSSLSFCRSP*MRKPLRPLPSGCMT Trigger: GGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAAACTGGAAGTTCTGATTCCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093299.13 ENSMUST00000123036.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCACATCTCTGTGGGACCTATGCTAGTTAGCGACAGGCAAACCCAATGGAAGCCGCTTCGTCCGTaGCCTTCAGGGTGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: FCHISVGPMLVSDRQTQWKPLRP*PSGCMT Trigger: GGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTT...CCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | TATCTGTGCACCCCAAGTGGCAACTGTGGGTGTGGAGTGATAGAAGAAGACACTAAGCCGCTTCGTCCGTaGCCTTCAGGGTGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: YLCTPSGNCGCGVIEEDTKPLRP*PSGCMT Trigger: GGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTT...AGTGTCTTCTTCTATCACTCCACACCCACAGTTGCCACTTGGGGTGCACAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093299.13 |
||
| CDS CCA 90 bp | AGCCGAAGTCCGAAGAATCAACATAGGGATAGGTATATTCGTGTTTaGGGACTTCGCCCTTGGCGAAGCGCACGTAGGAGTCCGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSPKNQHRDRYIRV*GLRPWRSARRSPRL Trigger: AAGACGCGGACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCAAACACGAATATACCTATCCCTATGTTGATTCTTCGGACTTCGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCAAACTGGGCGGCTGTGTCTaGATCACACTACCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QAHRNPNRLASPGPRGCKLGGCV*ITLPLG Trigger: TCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAG...TTTGCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CCA 90 bp | AATCAACATAGGGATAGGTATATTCGTGTTTGGGGACTTCGCCCTTaGCGAAGCGCACGTAGGAGTCCGCGTCTTCTGTGGTGTCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NQHRDRYIRVWGLRP*RSARRSPRLLWCLS Trigger: ACTTAGACACCACAGAAGACGCGGACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCAAACACGAATATACCTATCCCTATGTTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS-3UTR CAA 90 bp | GGGCAAGCTCACAGAAACCCAAATCGCCTTGCAAGCCCTGGTCCAAGAGGATGCTGCATCTGCAGGACTTaGGAAAGTAAGTCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GQAHRNPNRLASPGPRGCCICRT*ESKSKL Trigger: AAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCA...GCATCCTCTTGGACCAGGGCTTGCAAGGCGATTTGGGTTTCTGTGAGCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CCA 90 bp | GTAGCTGTCGTGAAAACGTCATCGTCTCCGAGCTCAGCTTCGTTATaGAGAGTGGAAGAGGAGGTCGTTGAACCTTCTATAAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAVVKTSSSPSSASL*RVEEEVVEPSIRSS Trigger: TGAAGACCTTATAGAAGGTTCAACGACCTCCTCTTCCACTCTCCATAACGAAGCTGAGCTCGGAGACGATGACGTTTTCACGACAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 90 bp | AGAAGCTGGGAGACCAAAGAGATGCCACTGTTTCTGAAGATGGTGTaGGAGCAGGGACAGGAATCAGAACTTCCAGTTTGTCTTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSWETKEMPLFLKMV*EQGQESELPVCLSV Trigger: GACAGAAAGACAAACTGGAAGTTCTGATTCCTGTCCCTGCTCCCACACCATCTTCAGAAACAGTGGCATCTCTTTGGTCTCCCAGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS-3UTR CAA 90 bp | AGTACTACTGTTTTGTGGTACATGCTTGCTATCCAGATTGCCTCCTCACATAACCTGGGCGGCTGTGTCTaGATCACACTACCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STTVLWYMLAIQIASSHNLGGCV*ITLPLG Trigger: TCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAG...GTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS GCA 90 bp | GTCTTCAATGGCTTTTCTCACGCCCCTGTCAAAGGCTCGTGCATCTaGAGGACTTTGGAAAGTAAGTCCAAACTTCCTGTTATCAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFNGFSHAPVKGSCI*RTLESKSKLPVINL Trigger: AAGGTTGATAACAGGAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGGGGCGTGAGAAAAGCCATTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS TCA 90 bp | AATGATGAAACGTCGGATTGGCTTTGGTGTAGACCAAGTCCTTTCTaGCATAGCATTCCAATACCACCAGTTTGTCTTTCTGTCGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NDETSDWLWCRPSPF*HSIPIPPVCLSVAR Trigger: GCGAGCGACAGAAAGACAAACTGGTGGTATTGGAATGCTATGTCAGAAAGGACTTGGTCTACACCAAAGCCAATCCGACGTTTCATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093298.12 |
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| CDS-3UTR CAA 90 bp | AGTACTACTGTTTTGTGGTACATGCTTGCTATCCAGATTGCCTCCTCACATAACTGCATCTGCAGGACTTaGGAAAGTAAGTCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: STTVLWYMLAIQIASSHNCICRT*ESKSKL Trigger: AAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCA...GTTATGTGAGGAGGCAATCTGGATAGCAAGCATGTACCACAAAACAGTAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS TCA 90 bp | CGTTACTGGTGCTTCCTGGTCTATGGTTCCCTTTTGCAAGCATATTaGAGAATATCCCAAATAATCTCTCAGACAAGCGAAGATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RYWCFLVYGSLLQAY*RISQIISQTSEDTK Trigger: CTTTGTATCTTCGCTTGTCTGAGAGATTATTTGGGATATTCTTCAATATGCTTGCAAAAGGGAACCATAGACCAGGAAGCACCAGTAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123036.2 |
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| CDS TCA 72 bp | TCCGCCGACGGGACTTGGCCCTGGGCGGCTGTGTCTTaGTCACACTACCTTTGGGATCCTCCCCGAAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SADGTWPWAAVS*SHYLWDPPRSR Trigger: TCGGCTTCGGGGAGGATCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS GCA 72 bp | TGCTGTCCGCGCACCACATACAGCTCACCCGGCGAATaGAAGTTCTCACGGCGTCGGGCGCGTCTTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CCPRTTYSSPGE*KFSRRRARLGS Trigger: ACTGCCAAGACGCGCCCGACGCCGTGAGAACTTGCATTCGCCGGGTGAGCTGTATGTGGTGCGCGGACAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 72 bp | TTCCGCCGACGGGACTTGGCCCTGGGCGGCTGTGTCTaGATCACACTACCTTTGGGATCCTCCCCGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FRRRDLALGGCV*ITLPLGSSPKP Trigger: CGGCTTCGGGGAGGATCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 90 bp | CCGTTCTCCTTCCGCCGACGGGACTTGGCCCTGGGCGGCTGTGTCTaGATCACACTACCTTTGGGATCCTCCCCGAAGCCGAAGTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PFSFRRRDLALGGCV*ITLPLGSSPKPKSE Trigger: TTCGGACTTCGGCTTCGGGGAGGATCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAAGGAGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 90 bp | TACACACACCGCGACCGTTCGCCGTTCTCCTTCCGCCGACGGGACTaGGCCCTGGGCGGCTGTGTCTTGATCACACTACCTTTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: YTHRDRSPFSFRRRD*ALGGCVLITLPLGS Trigger: GGATCCCAAAGGTAGTGTGATCAAGACACAGCCGCCCAGGGCCAAGTCCCGTCGGCGGAAGGAGAACGGCGAACGGTCGCGGTGTGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS CCA 72 bp | CCTTGGCGAAGCGCACGTAGGAGTCCGCGTCTTCTGTaGTGTCTAAGTATTTGCCGCGAACCGGCGCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWRSARRSPRLL*CLSICREPARA Trigger: GGCACGCGCCGGTTCGCGGCAAATACTTAGACACCACAGAAGACGCGGACTCCTACGTGCGCTTCGCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS GCA 72 bp | AGTCTCCCTCGGGGTCGGACATACAGTGGTACAGCATaGTGTCCGCGCACCACATACAGCTCACCCGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPRGRTYSGTA*CPRTTYSSPGE Trigger: TTCGCCGGGTGAGCTGTATGTGGTGCGCGGACAGCATGCTGTACCACTGTATGTCCGACCCCGAGGGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 72 bp | TGTCGCTCGCCATGGATGAGAAAGCCGCTTCGTCCGTaGCCTTCAGGGTGCATGACCTTACACACGCCGACG | + |
|
Preference number: 6 (lower is better) Translates to: CRSPWMRKPLRP*PSGCMTLHTPT Trigger: CGTCGGCGTGTGTAAGGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CAA 72 bp | CCGGCGAATGCAAGTTCTCACGGCGTCGGGCGCGTCTaGGCAGTGGCCCCTTCGGTTCTCTTCGTGATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: PANASSHGVGRV*AVAPSVLFVIK Trigger: TTTAATCACGAAGAGAACCGAAGGGGCCACTGCCAAGACGCGCCCGACGCCGTGAGAACTTGCATTCGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 90 bp | ACAGCTCACCCGGCGAATGCAAGTTCTCACGGCGTCGGGCGCGTCTaGGCAGTGGCCCCTTCGGTTCTCTTCGTGATTAAACATATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TAHPANASSHGVGRV*AVAPSVLFVIKHIP Trigger: AGGGATATGTTTAATCACGAAGAGAACCGAAGGGGCCACTGCCAAGACGCGCCCGACGCCGTGAGAACTTGCATTCGCCGGGTGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS CAA 90 bp | TTGTCTTTCTGTCGCTCGCCATGGATGAGAAAGCCGCTTCGTCCGTaGCCTTCAGGGTGCATGACCTTACACACGCCGACGCGACTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSFCRSPWMRKPLRP*PSGCMTLHTPTRLI Trigger: GATCAGTCGCGTCGGCGTGTGTAAGGTCATGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS TCA 72 bp | GGCGCGTCTTGGCAGTGGCCCCTTCGGTTCTCTTCGTaGTTAAACATATCCCTGCAGTACACACACCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GASWQWPLRFSS*LNISLQYTHRD Trigger: GTCGCGGTGTGTGTACTGCAGGGATATGTTTAATCACGAAGAGAACCGAAGGGGCCACTGCCAAGACGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 72 bp | CGTAGGAGTCCGCGTCTTCTGTGGTGTCTAAGTATTTaGCGCGAACCGGCGCGTGCCGGTAGTCTTCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRSPRLLWCLSI*REPARAGSLHN Trigger: GTTATGAAGACTACCGGCACGCGCCGGTTCGCGGCAAATACTTAGACACCACAGAAGACGCGGACTCCTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS CCA 72 bp | AGGGATAGGTATATTCGTGTTTGGGGACTTCGCCCTTaGCGAAGCGCACGTAGGAGTCCGCGTCTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RDRYIRVWGLRP*RSARRSPRLLW Trigger: CCACAGAAGACGCGGACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCAAACACGAATATACCTATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS GCA 72 bp | GGGGAGGAGATTGTCCTCGTAGTCGGCTCCCTCTTCTaGGAGGAATTAGAAGAACTGTCCGTAGCTGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GEEIVLVVGSLF*EELEELSVAVV Trigger: CACGACAGCTACGGACAGTTCTTCTAATTCCTCGCAGAAGAGGGAGCCGACTACGAGGACAATCTCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
||
| CDS TCA 72 bp | ATACCACCAGTTTGTCTTTCTGTCGCTCGCCATGGATaGGAAAGCCGCTTCGTCCGTTGCCTTCAGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPPVCLSVARHG*ESRFVRCLQGA Trigger: TGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAAACTGGTGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093298.12 |
||
| CDS TCA 72 bp | GAACTTCCAGTTTGTCTTTCTGTCGCTCGCCATGGATaGGAAAGCCGCTTCGTCCGTTGCCTTCAGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELPVCLSVARHG*ESRFVRCLQGA Trigger: TGCACCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAAACTGGAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093299.13 ENSMUST00000123036.2 |
||
| CDS CCA 72 bp | TCCAATACCACCAGTTTGTCTTTCTGTCGCTCGCCATaGATGAGAAAGCCGCTTCGTCCGTTGCCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNTTSLSFCRSP*MRKPLRPLPSG Trigger: CCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAAACTGGTGGTATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093298.12 |
||
| CDS CCA 72 bp | CAACCGCTGGTCAGGGTGGTAATGGTCCATGGGGTATaGGTCAAGGGTATAAATCTTCCGGTGCTCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPLVRVVMVHGV*VKGINLPVLTG Trigger: TCCTGTGAGCACCGGAAGATTTATACCCTTGACCCATACCCCATGGACCATTACCACCCTGACCAGCGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
||
| CDS CCA 72 bp | ATCAGAACTTCCAGTTTGTCTTTCTGTCGCTCGCCATaGATGAGAAAGCCGCTTCGTCCGTTGCCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: IRTSSLSFCRSP*MRKPLRPLPSG Trigger: CCCTGAAGGCAACGGACGAAGCGGCTTTCTCATCCATGGCGAGCGACAGAAAGACAAACTGGAAGTTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 72 bp | CCGAAGAATCAACATAGGGATAGGTATATTCGTGTTTaGGGACTTCGCCCTTGGCGAAGCGCACGTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PKNQHRDRYIRV*GLRPWRSARRS Trigger: ACTCCTACGTGCGCTTCGCCAAGGGCGAAGTCCCCAAACACGAATATACCTATCCCTATGTTGATTCTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 |
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| CDS GCA 72 bp | GGCTTTTCTCACGCCCCTGTCAAAGGCTCGTGCATCTaGAGGACTTTGGAAAGTAAGTCCAAACTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GFSHAPVKGSCI*RTLESKSKLPV Trigger: AACAGGAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGGGGCGTGAGAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 72 bp | ACGCCCCTGTCAAAGGCTCGTGCATCTGCAGGACTTTaGAAAGTAAGTCCAAACTTCCTGTTATCAACCTTC | + |
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Preference number: 6 (lower is better) Translates to: TPLSKARASAGL*KVSPNFLLSTF Trigger: GAAGGTTGATAACAGGAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGGGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 72 bp | GTGAAAACGTCATCGTCTCCGAGCTCAGCTTCGTTATaGAGAGTGGAAGAGGAGGTCGTTGAACCTTCTATA | + |
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Preference number: 6 (lower is better) Translates to: VKTSSSPSSASL*RVEEEVVEPSI Trigger: TATAGAAGGTTCAACGACCTCCTCTTCCACTCTCCATAACGAAGCTGAGCTCGGAGACGATGACGTTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CCA 72 bp | GAGACCAAAGAGATGCCACTGTTTCTGAAGATGGTGTaGGAGCAGGGACAGGAATCAGAACTTCCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ETKEMPLFLKMV*EQGQESELPVC Trigger: ACAAACTGGAAGTTCTGATTCCTGTCCCTGCTCCCACACCATCTTCAGAAACAGTGGCATCTCTTTGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CAA 72 bp | CACGCCCCTGTCAAAGGCTCGTGCATCTGCAGGACTTaGGAAAGTAAGTCCAAACTTCCTGTTATCAACCTT | + |
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Preference number: 6 (lower is better) Translates to: HAPVKGSCICRT*ESKSKLPVINL Trigger: AAGGTTGATAACAGGAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGGGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS CAA 90 bp | GGCTTTTCTCACGCCCCTGTCAAAGGCTCGTGCATCTGCAGGACTTaGGAAAGTAAGTCCAAACTTCCTGTTATCAACCTTCCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: GFSHAPVKGSCICRT*ESKSKLPVINLPMM Trigger: CATCATTGGAAGGTTGATAACAGGAAGTTTGGACTTACTTTCCAAAGTCCTGCAGATGCACGAGCCTTTGACAGGGGCGTGAGAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS TCA 72 bp | CTCAGCTTCGTTATGGAGAGTGGAAGAGGAGGTCGTTaGACCTTCTATAAGGTCTTCAATGGCTTTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LSFVMESGRGGR*TFYKVFNGFSH Trigger: GTGAGAAAAGCCATTGAAGACCTTATAGAAGGTTCAACGACCTCCTCTTCCACTCTCCATAACGAAGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093298.12 ENSMUST00000093299.13 ENSMUST00000123036.2 |
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| CDS TCA 72 bp | ACGTCGGATTGGCTTTGGTGTAGACCAAGTCCTTTCTaGCATAGCATTCCAATACCACCAGTTTGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSDWLWCRPSPF*HSIPIPPVCLS Trigger: AGAAAGACAAACTGGTGGTATTGGAATGCTATGTCAGAAAGGACTTGGTCTACACCAAAGCCAATCCGACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093298.12 |
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| CDS TCA 72 bp | TGCTTCCTGGTCTATGGTTCCCTTTTGCAAGCATATTaGAGAATATCCCAAATAATCTCTCAGACAAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: CFLVYGSLLQAY*RISQIISQTSE Trigger: TTCGCTTGTCTGAGAGATTATTTGGGATATTCTTCAATATGCTTGCAAAAGGGAACCATAGACCAGGAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123036.2 |
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| CDS GCA 72 bp | AATATAGCTGTCACAGAAATAAGGAAACGTTACTGGTaGTTCCTGGTCTATGGTTCCCTTTTGCAAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: NIAVTEIRKRYW*FLVYGSLLQAY Trigger: ATATGCTTGCAAAAGGGAACCATAGACCAGGAAGCACCAGTAACGTTTCCTTATTTCTGTGACAGCTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123036.2 |
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| CDS CCA 72 bp | AGAAATAAGGAAACGTTACTGGTGCTTCCTGGTCTATaGTTCCCTTTTGCAAGCATATTGAAGAATATCCCA | + |
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Preference number: 6 (lower is better) Translates to: RNKETLLVLPGL*FPFASILKNIP Trigger: TGGGATATTCTTCAATATGCTTGCAAAAGGGAACCATAGACCAGGAAGCACCAGTAACGTTTCCTTATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123036.2 |
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