Pregenerated sensors for SPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033735Ensembl transcript IDs: ENSMUST00000045986.8, ENSMUST00000174286.3, ENSMUST00000174769.2, ENSMUST00000204757.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTaGCAGTGCCCACCGCTCGCTGCTGGCTGGGTTGAAGGGCTTATA | + |
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Preference number: 1 (lower is better) Translates to: AHQLAPKPLQKPSED*QCPPLAAGWVEGLI Trigger: TATAAGCCCTTCAACCCAGCCAGCAGCGAGCGGTGGGCACTGCCAGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | GCCAAGGGCCACAGGGACAGTGCCAAGAGGGCTTGTCATGGGAGCTaGGACCTTTTCATAGTACCGCCATGTGGGCAGGGTGTGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: AKGHRDSAKRACHGS*DLFIVPPCGQGVKW Trigger: CCACTTCACACCCTGCCCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTGGCCCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | ACAGCAGGCCAAGGGCCACAGGGACAGTGCCAAGAGGGCTTGTCATaGGAGCTGGGACCTTTTCATAGTACCGCCATGTGGGCAGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: TAGQGPQGQCQEGLS*ELGPFHSTAMWAGC Trigger: ACACCCTGCCCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTGGCCCTTGGCCTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | GTCACTGACTGGGTTCTAGGACCCTCAGGGAAATGTCAGCCCAGGTaGGTCAGTGTGGACAGAAGCGTGAGAAGGGCACAGGTCTTCCGG | + |
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Preference number: 1 (lower is better) Translates to: VTDWVLGPSGKCQPR*VSVDRSVRRAQVFR Trigger: CCGGAAGACCTGTGCCCTTCTCACGCTTCTGTCCACACTGACCCACCTGGGCTGACATTTCCCTGAGGGTCCTAGAACCCAGTCAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR TCA 90 bp | CCGTCCTCTCTGTGCATCAGAGCCCACCCTCCTCACCCCACAGACTaGCCACAAACAAGAGCCTCAACCTCATCCGTCCAGTGTTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSSLCIRAHPPHPTD*PQTRASTSSVQCFC Trigger: GCAGAAACACTGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATGCACAGAGAGGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | GAGGGCTTGTCATGGGAGCTGGGACCTTTTCATAGTACCGCCATGTaGGCAGGGTGTGAAGTGGCTATCAAAGCAGCCCTCACTGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: EGLSWELGPFHSTAM*AGCEVAIKAALTGQ Trigger: CTGACCAGTGAGGGCTGCTTTGATAGCCACTTCACACCCTGCCCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR TCA 90 bp | AAAGCAGCCCTCACTGGTCAGCACTGTCTGCTGTGTGCTGGGCACTaGGGATCGATTGTCACTGACTGGGTTCTAGGACCCTCAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: KAALTGQHCLLCAGH*GSIVTDWVLGPSGK Trigger: TTTCCCTGAGGGTCCTAGAACCCAGTCAGTGACAATCGATCCTCAGTGCCCAGCACACAGCAGACAGTGCTGACCAGTGAGGGCTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR GCA 90 bp | CACCACTGCATAAACCTAGGCATGGCTGTGCATGCCTACAATCCCTaGCCTTGGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: HHCINLGMAVHAYNP*PWVDAGGSEAQGHF Trigger: AAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGGTTTATGCAGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | CATCCGACTTCAACTTCTGCAGTTTGCTCCTTAACTCTGGGTCCTTaGAGGTTTCCCGAGCCAACTGCTGCATGTCATTGTCCAGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: HPTSTSAVCSLTLGP*RFPEPTAACHCPGD Trigger: GTCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAAGTCGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR TCA 90 bp | AGTGGAGGTGGTAGTGTAGCTCAGTTGGAAGTGTTTACCCATGCATaGAGGACTGGCCTCCATCCCCACCACTGCATAAACCTAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: SGGGSVAQLEVFTHA*RTGLHPHHCINLGM Trigger: CATGCCTAGGTTTATGCAGTGGTGGGGATGGAGGCCAGTCCTTCATGCATGGGTAAACACTTCCAACTGAGCTACACTACCACCTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | TGCATAAACCTAGGCATGGCTGTGCATGCCTACAATCCCTGCCCTTaGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCATTTTACAGTT | + |
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Preference number: 1 (lower is better) Translates to: CINLGMAVHAYNPCP*VDAGGSEAQGHFTV Trigger: AACTGTAAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGGTTTATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | ATTAAGTGTGCTGTAAGGATCAGTCTTTTCAGAGGCACAGAGCTGTaGGTTACAGCTTGTAAGCAGCAGCCCAGGGGTCTGAACTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: IKCAVRISLFRGTEL*VTACKQQPRGLNSA Trigger: GGCTGAGTTCAGACCCCTGGGCTGCTGCTTACAAGCTGTAACCCACAGCTCTGTGCCTCTGAAAAGACTGATCCTTACAGCACACTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | ATCCATCTTGATGACTTTGGACCTGTGCCTACCACTATGTGGACCTaGATGAAAGAAGGCAGACAGCTCTCTGCCTTCGCTCTGAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: IHLDDFGPVPTTMWT*MKEGRQLSAFALKN Trigger: ATTTTTCAGAGCGAAGGCAGAGAGCTGTCTGCCTTCTTTCATCCAGGTCCACATAGTGGTAGGCACAGGTCCAAAGTCATCAAGATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | TGTGCACACCAGTACTGCATTTGTGTGGAGGCCAGAGGTCAGTCTTaGATGCCTTTCTCAGTTACTCTTCACTGTATTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CAHQYCICVEARGQS*MPFSVTLHCIVCVC Trigger: ACACACACACACAATACAGTGAAGAGTAACTGAGAAAGGCATCCAAGACTGACCTCTGGCCTCCACACAAATGCAGTACTGGTGTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR TCA 90 bp | CCAGGGTCATTCCTGGGCCTGTTAGAAGAGGTTAGCAGGTATTCATaGAGGACAACGCACACTCTATTGCATCTGCCTCATAACTATGTA | + |
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Preference number: 1 (lower is better) Translates to: PGSFLGLLEEVSRYS*RTTHTLLHLPHNYV Trigger: TACATAGTTATGAGGCAGATGCAATAGAGTGTGCGTTGTCCTTCATGAATACCTGCTAACCTCTTCTAACAGGCCCAGGAATGACCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CCA 90 bp | GCCAAACACAAAACACCAGCCTACTCTGCACTCATGATGACCCTTTaGGATGGGAGCTATGATTTAATTAAGTGTGCTGTAAGGATCAGT | + |
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Preference number: 1 (lower is better) Translates to: AKHKTPAYSALMMTL*DGSYDLIKCAVRIS Trigger: ACTGATCCTTACAGCACACTTAATTAAATCATAGCTCCCATCCCAAAGGGTCATCATGAGTGCAGAGTAGGCTGGTGTTTTGTGTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCATCCATCCAGACGTGATGCCCTCCGTCCTCTCTGTGCATCAGAGCCCAAAGCCTTCCGAGGACTaGCAGTGCCCACCGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: RSIHPDVMPSVLSVHQSPKPSED*QCPPLA Trigger: AGCGAGCGGTGGGCACTGCCAGTCCTCGGAAGGCTT...TGGGCTCTGATGCACAGAGAGGACGGAGGGCATCACGTCTGGATGGATGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR CAA 90 bp | GTCCCACAGTCCACCAGCGCCCCATCCGACTTCAACTTCTGCAGTTaGCTCCTTAACTCTGGGTCCTTGGAGGTTTCCCGAGCCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: VPQSTSAPSDFNFCS*LLNSGSLEVSRANC Trigger: GCAGTTGGCTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAAGTCGGATGGGGCGCTGGTGGACTGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACCTCATCCGTCCATCGCTCCCAAGCCTCTaGAGAAGCCTTCCGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: PSSPHRLTTNKSLNLIRPSLPSL*RSLPRT Trigger: AGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGA...TGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCATCCATCCAGACGTGATGCCCTCCGTCCTCTCTGTGCATCAGAGCCCATCCCGAGCCAACTGCTaGATGTCATTGTCCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RSIHPDVMPSVLSVHQSPSRANC*MSLSRG Trigger: TCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGA...TGGGCTCTGATGCACAGAGAGGACGGAGGGCATCACGTCTGGATGGATGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCTTGTCATGGGAGCTGGGACCTTTTCATAGTACCGCCATGTGGGCAGGGGCACTGTCTGCTGTGTaGTGGGCACTGAGGATCGAT | + |
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Preference number: 2 (lower is better) Translates to: EGLSWELGPFHSTAMWAGALSAV*WALRID Trigger: ATCGATCCTCAGTGCCCAGCACACAGCAGACAGTGC...CCCTGCCCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGGACAGAGAACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCCGCTCGCTGCTGGCTaGGTTGAAGGGCTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: RGQRTPVHISSLPSLCRSPLAAG*VEGLIC Trigger: ACATATAAGCCCTTCAACCCAGCCAGCAGCGAGCGG...GCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | CATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACATTGTCCAGGGGACCTaGAGCATAGCTCAGCACCCG | + |
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Preference number: 2 (lower is better) Translates to: HQSPPSSPHRLTTNKSLNIVQGT*SIAQHP Trigger: CGGGTGCTGAGCTATGCTCCAGGTCCCCTGGACAAT...GTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCATGCCTACAATCCCTGCCCTTGGGTGGACGCAGGAGGATCAGAAGCTCGGGCAGGGTGTGAAGTaGCTATCAAAGCAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LCMPTIPALGWTQEDQKLGQGVK*LSKQPS Trigger: TGAGGGCTGCTTTGATAGCCACTTCACACCCTGCCC...GAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | CATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACAAGCCCAGCAGTTTCTaGGCTGAAGTCCCACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: HQSPPSSPHRLTTNKSLNKPSSF*AEVPQS Trigger: GGACTGTGGGACTTCAGCCCAGAAACTGCTGGGCTT...GTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTGCCCTTGGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCATTTTACAGCTGTGTGCTGGGCACTaGGGATCGATTGTCACTGAC | + |
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Preference number: 2 (lower is better) Translates to: IPALGWTQEDQKLRVILQLCAGH*GSIVTD Trigger: GTCAGTGACAATCGATCCTCAGTGCCCAGCACACAG...CTGTAAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGAACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCGACAGAGAACTCCAGTaGACATCAGCTCGCTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: DRELQCTSARSQASAEAFDRELQ*TSARSQ Trigger: TTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTC...GAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGCATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTTGGAAGGTGTCCTTTTaGAGCAAGCCCAGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CASEPTLLTPQTDHKQEPWKVSF*SKPSSF Trigger: GAAACTGCTGGGCTTGCTGCAAAAGGACACCTTCCA...AGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR CAA 90 bp | CCATCCGACTTCAACTTCTGCAGTTTGCTCCTTAACTCTGGGTCCTaGGAGGTTTCCCGAGCCAACTGCTGCATGTCATTGTCCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSDFNFCSLLLNSGS*EVSRANCCMSLSRG Trigger: TCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAAGTCGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR CAA 90 bp | CTGCATAAACCTAGGCATGGCTGTGCATGCCTACAATCCCTGCCCTaGGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCATTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: LHKPRHGCACLQSLP*GGRRRIRSSGSFYS Trigger: ACTGTAAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGGTTTATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | CCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCCACCTCTAAAGCACTCTTCCAGGACAGAGAACTCCAGTaGACATCAGCTCGCTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSSVSASPALPTSKALFQDRELQ*TSARSQ Trigger: TTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTC...CTGGAAGAGTGCTTTAGAGGTGGGAAGAGCAGGAGAAGCAGAAACACTGGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGGCAAGATAATCTCAACTTCAAGTCCAGTCTCAGAAGGAAAGGAGACTCACGTGAGTCCACTGCCCTaGGTGCGGCTCCTTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: WGKIISTSSPVSEGKETHVSPLP*VRLLHG Trigger: ACCATGAAGGAGCCGCACTCAGGGCAGTGGACTCAC...GTGAGTCTCCTTTCCTTCTGAGACTGGACTTGAAGTTGAGATTATCTTGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | CATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACTCAACTTCTGCAGTTTaGTCCTTAACTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HQSPPSSPHRLTTNKSLNSTSAV*SLTLGP Trigger: AGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGA...GTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAACACAAAACACCAGCCTACTCTGCACTCATGATGACCCTTTGGGATGGCCGCTCGCTGCTGGCTaGGTTGAAGGGCTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: CQTQNTSLLCTHDDPLGWPLAAG*VEGLIC Trigger: ACATATAAGCCCTTCAACCCAGCCAGCAGCGAGCGG...CCATCCCAAAGGGTCATCATGAGTGCAGAGTAGGCTGGTGTTTTGTGTTTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGCCATTACCATTCCAGAGACTCCACTGGGAAAGGGGATAGAAGTCACCTGGCTGGGGACTGTATaGCCCTTGTCAAGTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: NSAITIPETPLGKGIEVTWLGTV*PLSSVP Trigger: TGGCACACTTGACAAGGGCCATACAGTCCCCAGCCA...GGTGACTTCTATCCCCTTTCCCAGTGGAGTCTCTGGAATGGTAATGGCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGGATGCAGGCAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGTCGCTCCCAAGCCTCTaGAGAAGCCTTCCGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: HRMQAVQQTNEVQGASIQSLPSL*RSLPRT Trigger: AGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGA...CTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTGCCTGCATCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAAGAGCCTCAACCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCTCCGTCCAGTGTTTCTaGTTCTCCTGCTCTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TNKSLNLIRPVFLLLLLFSVQCF*FSCSSH Trigger: GTGGGAAGAGCAGGAGAAGCAGAAACACTGGACGGA...GAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGGTTGAGGCTCTTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR GCA 90 bp | AACACCACAGGATGCAGGCAGTACAACAAACAAATGAAGTTCAAGGAGCATCCACCTCCGTCCTCTCTGTaGATCAGAGCCCACCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NTTGCRQYNKQMKFKEHPPPSSL*IRAHPP Trigger: AGGAGGGTGGGCTCTGATGCACAGAGAGGACGGAGG...TGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTGCCTGCATCCTGTGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR TCA 90 bp | AACCTAGGCATGGCTGTGCATGCCTACAATCCCTGCCCTTGGGTGGACGCAGGAAGTACAACAAACAAATaGAGTTCAAGGAGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: NLGMAVHAYNPCPWVDAGSTTNK*SSRSIH Trigger: ATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACT...TCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAGAGGGCTTGTCATGGGAGCTGGGACCTTTTCATAGTACCGCCATGTGGTCTCTGCCTTCGCTCTaGAAAATAAGAGCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: CQEGLSWELGPFHSTAMWSLPSL*KIRAVK Trigger: CTTTACTGCTCTTATTTTTCAGAGCGAAGGCAGAGA...CCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR TCA 90 bp | GATGCCTTTCTCAGTTACTCTTCACTGTATTGTGTGTGTGTGTGTGTGTGTGTGAATAGAGGCATAGCCTaGAGGAAGGACAGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DAFLSYSSLYCVCVCVCVNRGIA*RKDRPH Trigger: GTGGGGCCTGTCCTTCCTTCAGGCTATGCCTCTATT...CACACACACACACACACACACACAATACAGTGAAGAGTAACTGAGAAAGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | AACACCACAGGATGCAGGCAGTACAACAAACAAATGAAGTTCAAGGAGCATCCACCGCTCGCTGCTGGCTaGGTTGAAGGGCTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: NTTGCRQYNKQMKFKEHPPLAAG*VEGLIC Trigger: ACATATAAGCCCTTCAACCCAGCCAGCAGCGAGCGG...TGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTGCCTGCATCCTGTGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGTCTTAGAGCAGATCTGTAGATCCCTGCAGTTAGTTATATGGGTTCCCTCGATTGTCACTGACTaGGTTCTAGGACCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RKVLEQICRSLQLVIWVPSIVTD*VLGPSG Trigger: CCCTGAGGGTCCTAGAACCCAGTCAGTGACAATCGA...GGGAACCCATATAACTAACTGCAGGGATCTACAGATCTGCTCTAAGACTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR TCA 72 bp | AATCCCCTTCCCTCGTCTTCCAAAAGGGCCCGAGTGTaGGTCCACTGCCCTGAGTGCGGCTCCTTCATGGTG | + |
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Preference number: 3 (lower is better) Translates to: NPLPSSSKRARV*VHCPECGSFMV Trigger: CACCATGAAGGAGCCGCACTCAGGGCAGTGGACTCACACTCGGGCCCTTTTGGAAGACGAGGGAAGGGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR-3UTR CAA 90 bp | AGGAGCATCCATCCAGACGTGATGCCCTCCGTCCTCTCTGTGCATCAGAGCCCAAACTGCTGCATGTCATaGTCCAGGGGACCTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSIHPDVMPSVLSVHQSPNCCMS*SRGPGA Trigger: TGCTCCAGGTCCCCTGGACAATGACATGCAGCAGTT...TGGGCTCTGATGCACAGAGAGGACGGAGGGCATCACGTCTGGATGGATGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
||
| 3UTR TCA 72 bp | CTGTGCATCAGAGCCCACCCTCCTCACCCCACAGACTaGCCACAAACAAGAGCCTCAACCTCATCCGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCIRAHPPHPTD*PQTRASTSSVQ Trigger: CTGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | CACAGGGACAGTGCCAAGAGGGCTTGTCATGGGAGCTaGGACCTTTTCATAGTACCGCCATGTGGGCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HRDSAKRACHGS*DLFIVPPCGQG Trigger: ACCCTGCCCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | CAAGGGCCACAGGGACAGTGCCAAGAGGGCTTGTCATaGGAGCTGGGACCTTTTCATAGTACCGCCATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGPQGQCQEGLS*ELGPFHSTAMW Trigger: CCACATGGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTGGCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR-3UTR CAA 90 bp | AACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTCGCTGCTGGCTGGGTaGAAGGGCTTATATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSSAHQLAPKPLQKPSEDSLLAG*KGLYVC Trigger: ACACACATATAAGCCCTTCAACCCAGCCAGCAGCGA...GTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| 3UTR TCA 72 bp | AATGTCAGCCCAGGTGGGTCAGTGTGGACAGAAGCGTaGGAAGGGCACAGGTCTTCCGGGACATCCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NVSPGGSVWTEA*EGHRSSGTSIL Trigger: CAAGATGGATGTCCCGGAAGACCTGTGCCCTTCTCACGCTTCTGTCCACACTGACCCACCTGGGCTGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR TCA 72 bp | CTCACTGGTCAGCACTGTCTGCTGTGTGCTGGGCACTaGGGATCGATTGTCACTGACTGGGTTCTAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LTGQHCLLCAGH*GSIVTDWVLGP Trigger: GGGTCCTAGAACCCAGTCAGTGACAATCGATCCTCAGTGCCCAGCACACAGCAGACAGTGCTGACCAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR GCA 72 bp | CCACCAGCGCCCCATCCGACTTCAACTTCTGCAGTTTaGTCCTTAACTCTGGGTCCTTGGAGGTTTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPAPHPTSTSAV*SLTLGPWRFPE Trigger: CTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAAGTCGGATGGGGCGCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
||
| 3UTR TCA 72 bp | GGAATCCTGCAGGACCTGCACAATAGAGGCATAGCCTaGAGGAAGGACAGGCCCCACCTTTCCAGGTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GILQDLHNRGIA*RKDRPHLSRLH Trigger: ATGCAACCTGGAAAGGTGGGGCCTGTCCTTCCTTCAGGCTATGCCTCTATTGTGCAGGTCCTGCAGGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR GCA 72 bp | CTGTATGGCCCTTGTCAAGTGTGCCAAGAGGCTGTCTaGAGACCAGTCCCACTGAGTGTCCAACCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LYGPCQVCQEAV*RPVPLSVQPMT Trigger: AGTCATGGGTTGGACACTCAGTGGGACTGGTCTGCAGACAGCCTCTTGGCACACTTGACAAGGGCCATACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR GCA 72 bp | ATAAACCTAGGCATGGCTGTGCATGCCTACAATCCCTaGCCTTGGGTGGACGCAGGAGGATCAGAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: INLGMAVHAYNP*PWVDAGGSEAQ Trigger: CTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGGTTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | GCATGGCTGTGCATGCCTACAATCCCTGCCCTTGGGTaGACGCAGGAGGATCAGAAGCTCAGGGTCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AWLCMPTIPALG*TQEDQKLRVIL Trigger: TAAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | CTTTTCATAGTACCGCCATGTGGGCAGGGTGTGAAGTaGCTATCAAAGCAGCCCTCACTGGTCAGCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LFIVPPCGQGVK*LSKQPSLVSTV Trigger: GACAGTGCTGACCAGTGAGGGCTGCTTTGATAGCCACTTCACACCCTGCCCACATGGCGGTACTATGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | GCTGTAAGGATCAGTCTTTTCAGAGGCACAGAGCTGTaGGTTACAGCTTGTAAGCAGCAGCCCAGGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AVRISLFRGTEL*VTACKQQPRGL Trigger: CAGACCCCTGGGCTGCTGCTTACAAGCTGTAACCCACAGCTCTGTGCCTCTGAAAAGACTGATCCTTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | GATGACTTTGGACCTGTGCCTACCACTATGTGGACCTaGATGAAAGAAGGCAGACAGCTCTCTGCCTTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: DDFGPVPTTMWT*MKEGRQLSAFA Trigger: AGCGAAGGCAGAGAGCTGTCTGCCTTCTTTCATCCAGGTCCACATAGTGGTAGGCACAGGTCCAAAGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR TCA 72 bp | GGTAGTGTAGCTCAGTTGGAAGTGTTTACCCATGCATaGAGGACTGGCCTCCATCCCCACCACTGCATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSVAQLEVFTHA*RTGLHPHHCIN Trigger: GTTTATGCAGTGGTGGGGATGGAGGCCAGTCCTTCATGCATGGGTAAACACTTCCAACTGAGCTACACTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR TCA 72 bp | AGAGGAAGAAGAGGAGGAAGAGGAGGAAGAGCTAGATaGCCCACACATGTAATCTCAGCATCCAGCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGRRGGRGGRAR*PTHVISASSRL Trigger: CAGCCTGCTGGATGCTGAGATTACATGTGTGGGTCATCTAGCTCTTCCTCCTCTTCCTCCTCTTCTTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | CATCTTGATGACTTTGGACCTGTGCCTACCACTATGTaGACCTGGATGAAAGAAGGCAGACAGCTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLDDFGPVPTTM*TWMKEGRQLSA Trigger: GGCAGAGAGCTGTCTGCCTTCTTTCATCCAGGTCCACATAGTGGTAGGCACAGGTCCAAAGTCATCAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | AGCTCAGTTGGAAGTGTTTACCCATGCATGAAGGACTaGCCTCCATCCCCACCACTGCATAAACCTAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSVGSVYPCMKD*PPSPPLHKPRH Trigger: ATGCCTAGGTTTATGCAGTGGTGGGGATGGAGGCCAGTCCTTCATGCATGGGTAAACACTTCCAACTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCTGTGTGTGTGTGTGTGTGTGTGTTGAGGATGGAACCCAAGGCCTTATGTTTCCTGAAGGCCTGTaGGTTCTAAGTCTGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLCVCVCVCVEDGTQGLMFPEGL*VLSLYH Trigger: GTGGTACAGACTTAGAACCAACAGGCCTTCAGGAAA...CATAAGGCCTTGGGTTCCATCCTCAACACACACACACACACACACACAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | TCAACTTCTGCAGTTTGCTCCTTAACTCTGGGTCCTTaGAGGTTTCCCGAGCCAACTGCTGCATGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: STSAVCSLTLGP*RFPEPTAACHC Trigger: ACAATGACATGCAGCAGTTGGCTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
||
| 3UTR CCA 72 bp | CCATGTTTGAATGTGCACACCAGTACTGCATTTGTGTaGAGGCCAGAGGTCAGTCTTGGATGCCTTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLNVHTSTAFV*RPEVSLGCLSQ Trigger: CTGAGAAAGGCATCCAAGACTGACCTCTGGCCTCCACACAAATGCAGTACTGGTGTGCACATTCAAACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGACGTGATGCCCTCTCGCTGCTGGCTGGGTaGAAGGGCTTATATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QYNKQMKFKEHPSRRDALSLLAG*KGLYVC Trigger: ACACACATATAAGCCCTTCAACCCAGCCAGCAGCGA...GAGGGCATCACGTCTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGATGCAGGCAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGTTCAACTTCTGCAGTTaGCTCCTTAACTCTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HRMQAVQQTNEVQGASIQFNFCS*LLNSGS Trigger: GGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAA...CTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTGCCTGCATCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
||
| 3UTR GCA 72 bp | ACCAGAGTCAAGGGAAGACCAGTGAACACCACAGGATaGAGGCAGTACAACAAACAAATGAAGTTCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TRVKGRPVNTTG*RQYNKQMKFKE Trigger: CTCCTTGAACTTCATTTGTTTGTTGTACTGCCTGCATCCTGTGGTGTTCACTGGTCTTCCCTTGACTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | CAGTACTGCATTTGTGTGGAGGCCAGAGGTCAGTCTTaGATGCCTTTCTCAGTTACTCTTCACTGTATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QYCICVEARGQS*MPFSVTLHCIV Trigger: CACAATACAGTGAAGAGTAACTGAGAAAGGCATCCAAGACTGACCTCTGGCCTCCACACAAATGCAGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR GCA 72 bp | GGTATTCATGAAGGACAACGCACACTCTATTGCATCTaGCTCATAACTATGTATTTGGACCAGAGTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GIHEGQRTLYCI*LITMYLDQSQG Trigger: CCCTTGACTCTGGTCCAAATACATAGTTATGAGGCAGATGCAATAGAGTGTGCGTTGTCCTTCATGAATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR TCA 72 bp | TACTATCATCTTATCTACCTTGTAGTCACCCATGTTTaGATGTGCACACCAGTACTGCATTTGTGTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YYHLIYLVVTHV*MCTPVLHLCGG Trigger: GCCTCCACACAAATGCAGTACTGGTGTGCACATTCAAACATGGGTGACTACAAGGTAGATAAGATGATAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CCA 72 bp | AAAACACCAGCCTACTCTGCACTCATGATGACCCTTTaGGATGGGAGCTATGATTTAATTAAGTGTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KTPAYSALMMTL*DGSYDLIKCAV Trigger: TACAGCACACTTAATTAAATCATAGCTCCCATCCCAAAGGGTCATCATGAGTGCAGAGTAGGCTGGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGAGAACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCAGCAACCGGGCCAGCTaGGGGGCCAGGGCGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQRTPVHISSLPSLCRSSNRAS*GARARP Trigger: TGGTCGCGCCCTGGCCCCGCAGCTGGCCCGGTTGCT...GCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTCCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | CATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACAGCAACCGGGCCAGCTaGGGGGCCAGGGCGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HQSPPSSPHRLTTNKSLNSNRAS*GARARP Trigger: TGGTCGCGCCCTGGCCCCGCAGCTGGCCCGGTTGCT...GTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACCTCATCCGTCCAAGCAACCGGGCCAGCTaGGGGGCCAGGGCGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSPHRLTTNKSLNLIRPSNRAS*GARARP Trigger: TGGTCGCGCCCTGGCCCCGCAGCTGGCCCGGTTGCT...TGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTGTTCAGGTCAGGCTGCTaGGCGCCCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQCTSARSQASAEAFRGLFRSGC*APSSSF Trigger: GAAGGAGGAGCTGGGCGCTCAGCAGCCTGACCTGAA...CAGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTGGCCCAGATCGGCGGCTaGCAGCACCACTTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQCTSARSQASAEAFRGLAQIGG*QHHFQV Trigger: GACCTGAAAGTGGTGCTGGCAGCCGCCGATCTGGGC...CAGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACGCCCAGATCGGCGGCTaGCAGCACCACTTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSAHQLAPKPLQKPSEDAQIGG*QHHFQV Trigger: GACCTGAAAGTGGTGCTGGCAGCCGCCGATCTGGGC...GTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| 3UTR CAA 72 bp | GCAGGCCAAGGGCCACAGGGACAGTGCCAAGAGGGCTaGTCATGGGAGCTGGGACCTTTTCATAGTACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQGPQGQCQEG*SWELGPFHSTA Trigger: GGCGGTACTATGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTGGCCCTTGGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| 3UTR CAA 72 bp | CCTAGGCATGGCTGTGCATGCCTACAATCCCTGCCCTaGGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRHGCACLQSLP*GGRRRIRSSGS Trigger: TGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGCCAGGGCTATCCTaGAAGGCATTCAAGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRTPVHISSLPSLCRSLPRPGLS*KAFKVP Trigger: CGGCACCTTGAATGCCTTCCAGGATAGCCCTGGCCT...CGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTGAAGCCCAGCAGTTTCTaGGCTGAAGTCCCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQCTSARSQASAEAFRGLKPSSF*AEVPQS Trigger: GGACTGTGGGACTTCAGCCCAGAAACTGCTGGGCTT...CAGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
||
| CDS-3UTR TCA 90 bp | CCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCCACCTCTAAAGCACTCTTCAGGTCAGGCTGCTaGGCGCCCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPSSVSASPALPTSKALFRSGC*APSSSF Trigger: GAAGGAGGAGCTGGGCGCTCAGCAGCCTGACCTGAA...GAGTGCTTTAGAGGTGGGAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGCATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGATTGTCCAGGGGACCTaGAGCATAGCTCAGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCASEPTLLTPQTDHKQEIVQGT*SIAQHP Trigger: CGGGTGCTGAGCTATGCTCCAGGTCCCCTGGACAAT...CTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATGCACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTAAGCCCAGCAGTTTCTaGGCTGAAGTCCCACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPVHISSLPSLCRSLPRTKPSSF*AEVPQS Trigger: GGACTGTGGGACTTCAGCCCAGAAACTGCTGGGCTT...AGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | GGCATGGCTGTGCATGCCTACAATCCCTGCCCTTGGGTGGACGCAGGAGGATCAACATGGGCTCCAGACTaGAAGGTGTCCTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMAVHAYNPCPWVDAGGSTWAPD*KVSFCS Trigger: GCTGCAAAAGGACACCTTCCAGTCTGGAGCCCATGT...TGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAGCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| CDS-3UTR TCA 90 bp | CAAACAAGAGCCTCAACCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCTTCAGGTCAGGCTGCTaGGCGCCCAGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTRASTSSVQCFCFSCSSFRSGC*APSSSF Trigger: GAAGGAGGAGCTGGGCGCTCAGCAGCCTGACCTGAA...GGAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGGTTGAGGCTCTTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGAGCATCCATCCAGACGTGATGCCCTCCGTCCTCTCTGTGCATCAGTCCCGAGCCAACTGCTaGATGTCATTGTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSRSIHPDVMPSVLSVHQSRANC*MSLSRG Trigger: TCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGA...CTGATGCACAGAGAGGACGGAGGGCATCACGTCTGGATGGATGCTCCTTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGCCCTTGGGTGGACGCAGGAGGATCAGAAGCTCAGGGTCATTTTACAGTCCCGAGCCAACTGCTaGATGTCATTGTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPALGWTQEDQKLRVILQSRANC*MSLSRG Trigger: TCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGA...CTGTAAAATGACCCTGAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGCATGCCTACAATCCCTGCCCTTGGGTGGACGCAGGAGGATCAGAAGCTCTGGAAGGTGTCCTTTTaGAGCAAGCCCAGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCMPTIPALGWTQEDQKLWKVSF*SKPSSF Trigger: GAAACTGCTGGGCTTGCTGCAAAAGGACACCTTCCA...GAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGACAGAGAACTCCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCAAGTCAAACAGAGCATaGAGGTCAGGTTCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQRTPVHISSLPSLCRSKSNRA*RSGSEP Trigger: GGGCTCTGAACCTGACCTCCATGCTCTGTTTGACTT...GCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGGAGTTCTCTGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCTCTTCCCACCTCTAAAGCACTCTTCCAGGGGACAGAGAACTCCAGTAGGCCAGGGCTATCCTaGAAGGCATTCAAGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: SPALPTSKALFQGTENSSRPGLS*KAFKVP Trigger: CGGCACCTTGAATGCCTTCCAGGATAGCCCTGGCCT...ACTGGAGTTCTCTGTCCCCTGGAAGAGTGCTTTAGAGGTGGGAAGAGCAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| 3UTR CAA 72 bp | TCCACCAGCGCCCCATCCGACTTCAACTTCTGCAGTTaGCTCCTTAACTCTGGGTCCTTGGAGGTTTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: STSAPSDFNFCS*LLNSGSLEVSR Trigger: TCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAAGTCGGATGGGGCGCTGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACCTCATCCGTCCACAGGGCACACAGAGATaGGATGTTAACCACAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSSPHRLTTNKSLNLIRPQGTQR*DVNHSL Trigger: AAGACTGTGGTTAACATCTCATCTCTGTGTGCCCTG...TGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| 3UTR CAA 72 bp | TGTGCCTCTGCCTCTGTGTGTGTGTGTGTGTGTGTGTaGAGGATGGAACCCAAGGCCTTATGCATGCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: CASASVCVCVCV*RMEPKALCMLG Trigger: ACCTAGCATGCATAAGGCCTTGGGTTCCATCCTCAACACACACACACACACACACACAGAGGCAGAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| CDS-3UTR GCA 90 bp | CTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAACCTCATCCGTCCAGTTCAACTTCTGCAGTTTaGTCCTTAACTCTGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLTPQTDHKQEPQPHPSSSTSAV*SLTLGP Trigger: AGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGA...ACTGGACGGATGAGGTTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CCA 90 bp | CTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCCACCTCTAAAGCACTCTAAGTCAAACAGAGCATaGAGGTCAGGTTCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LIRPVFLLLLLFPPLKHSKSNRA*RSGSEP Trigger: GGGCTCTGAACCTGACCTCCATGCTCTGTTTGACTT...AGAGTGCTTTAGAGGTGGGAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR TCA 90 bp | TGCCTCTGTGTGTGTGTGTGTGTGTGTGTTGAGGATGGAACCCAAGGCCTTATGCAGGGCACACAGAGATaGGATGTTAACCACAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: CLCVCVCVCVEDGTQGLMQGTQR*DVNHSL Trigger: AAGACTGTGGTTAACATCTCATCTCTGTGTGCCCTG...CATAAGGCCTTGGGTTCCATCCTCAACACACACACACACACACACACAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CAA 72 bp | TTCAACTTCTGCAGTTTGCTCCTTAACTCTGGGTCCTaGGAGGTTTCCCGAGCCAACTGCTGCATGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: FNFCSLLLNSGS*EVSRANCCMSL Trigger: CAATGACATGCAGCAGTTGGCTCGGGAAACCTCCAAGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| CDS-3UTR CCA 90 bp | CAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGACGTGATGCCCTCACATGGGCTCCAGACTaGAAGGTGTCCTTTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QYNKQMKFKEHPSRRDALTWAPD*KVSFCS Trigger: GCTGCAAAAGGACACCTTCCAGTCTGGAGCCCATGT...GAGGGCATCACGTCTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGAGCCTCAACCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCTCAACTTCTGCAGTTTaGTCCTTAACTCTGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TNKSLNLIRPVFLLLLLFSTSAV*SLTLGP Trigger: AGGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGA...GAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGGTTGAGGCTCTTGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR GCA 90 bp | CAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGACGTGATGCCCTCTGGAAGGTGTCCTTTTaGAGCAAGCCCAGCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QYNKQMKFKEHPSRRDALWKVSF*SKPSSF Trigger: GAAACTGCTGGGCTTGCTGCAAAAGGACACCTTCCA...GAGGGCATCACGTCTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| 3UTR CAA 72 bp | CGCACACTCTATTGCATCTGCCTCATAACTATGTATTaGGACCAGAGTCAAGGGAAGACCAGTGAACACCAC | + |
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Preference number: 4 (lower is better) Translates to: RTLYCICLITMY*DQSQGKTSEHH Trigger: GTGGTGTTCACTGGTCTTCCCTTGACTCTGGTCCAAATACATAGTTATGAGGCAGATGCAATAGAGTGTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| 3UTR CAA 72 bp | CTACTATCATCTTATCTACCTTGTAGTCACCCATGTTaGAATGTGCACACCAGTACTGCATTTGTGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLSSYLPCSHPC*NVHTSTAFVWR Trigger: CCTCCACACAAATGCAGTACTGGTGTGCACATTCAAACATGGGTGACTACAAGGTAGATAAGATGATAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| CDS GCA 90 bp | GGAGCTCGCGTACTGCGCTCAGCAACCGCTGCACGCCAGCCTCGGTaGCCAGATCGGCGGCTGCCAGCACCACTTTCAGGTCAGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GARVLRSATAARQPR*PDRRLPAPLSGQAA Trigger: AGCAGCCTGACCTGAAAGTGGTGCTGGCAGCCGCCGATCTGGGCACCGAGGCTGGCGTGCAGCGGTTGCTGAGCGCAGTACGCGAGCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS GCA 90 bp | AGCGCCCAGCTCCTCCTTCAGTTGCCGCAGCATCGACTCACTGCGTaGGCTTACGAGCATCACGGAACCGGGAGACAGCAACCGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SAQLLLQLPQHRLTA*AYEHHGTGRQQPGQ Trigger: CTGGCCCGGTTGCTGTCTCCCGGTTCCGTGATGCTCGTAAGCGCACGCAGTGAGTCGATGCTGCGGCAACTGAAGGAGGAGCTGGGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS CCA 90 bp | GGAGGTTTCCCGAGCCAACTGCTGCATGTCATTGTCCAGGGGACCTaGAGCATAGCTCAGCACCCGCACACTCGGTTCCTCAGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GGFPSQLLHVIVQGT*SIAQHPHTRFLSSQ Trigger: CTGGCTGCTGAGGAACCGAGTGTGCGGGTGCTGAGCTATGCTCCAGGTCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGAAACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | TGGGTCCTTGGAGGTTTCCCGAGCCAACTGCTGCATGTCATTGTCCAGGGGACCCAGCTCCTCCTTCAGTaGCCGCAGCATCGACTCACT | + |
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Preference number: 5 (lower is better) Translates to: WVLGGFPSQLLHVIVQGTQLLLQ*PQHRLT Trigger: AGTGAGTCGATGCTGCGGCAACTGAAGGAGGAGCTG...GGTCCCCTGGACAATGACATGCAGCAGTTGGCTCGGGAAACCTCCAAGGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174769.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGCACATCAGCTCGCTCCCAAGCCTCTGCAGAAGCCTTCCGAGGACTGGCACGTTGAGGAAGCCTTaGGAAACATCCCCAAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: PVHISSLPSLCRSLPRTGTLRKP*ETSPRV Trigger: CACTCTTGGGGATGTTTCCAAAGGCTTCCTCAACGT...GCCAGTCCTCGGAAGGCTTCTGCAGAGGCTTGGGAGCGAGCTGATGTGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | TCAAGGAGCATCCATCCAGACGTGATGCCCTCCGTCCTCTCTGTGCATCAGAGCAACTGCTGCATGTCATaGTCCAGGGGACCTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: SRSIHPDVMPSVLSVHQSNCCMS*SRGPGA Trigger: TGCTCCAGGTCCCCTGGACAATGACATGCAGCAGTT...GCTCTGATGCACAGAGAGGACGGAGGGCATCACGTCTGGATGGATGCTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGCCCACCCTCCTCACCCCACAGACTGACCACAAACAAGAGCCTCAAAACTGCTGCATGTCATaGTCCAGGGGACCTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ASEPTLLTPQTDHKQEPQNCCMS*SRGPGA Trigger: TGCTCCAGGTCCCCTGGACAATGACATGCAGCAGTT...TTGAGGCTCTTGTTTGTGGTCAGTCTGTGGGGTGAGGAGGGTGGGCTCTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | CCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCCACCTCTAAAGCACTCCAGCTCCTCCTTCAGTaGCCGCAGCATCGACTCACT | + |
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Preference number: 5 (lower is better) Translates to: PHPSSVSASPALPTSKALQLLLQ*PQHRLT Trigger: AGTGAGTCGATGCTGCGGCAACTGAAGGAGGAGCTG...GAGTGCTTTAGAGGTGGGAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | CTGTGCATGCCTACAATCCCTGCCCTTGGGTGGACGCAGGAGGATCAGAAGCTCACGTTGAGGAAGCCTTaGGAAACATCCCCAAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LCMPTIPALGWTQEDQKLTLRKP*ETSPRV Trigger: CACTCTTGGGGATGTTTCCAAAGGCTTCCTCAACGT...GAGCTTCTGATCCTCCTGCGTCCACCCAAGGGCAGGGATTGTAGGCATGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | AGGGCCACAGGGACAGTGCCAAGAGGGCTTGTCATGGGAGCTGGGACCTTTTCATTCAACTTCTGCAGTTaGCTCCTTAACTCTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: RATGTVPRGLVMGAGTFSFNFCS*LLNSGS Trigger: GGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAA...TGAAAAGGTCCCAGCTCCCATGACAAGCCCTCTTGGCACTGTCCCTGTGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204757.3 |
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| CDS CCA 90 bp | GGCTATCCTGGAAGGCATTCAAGGTGCCGGAAGTCAAACAGAGCATaGAGGTCAGGTTCAGAGCCCAGTAGTTGTTCACCTCAGCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: GYPGRHSRCRKSNRA*RSGSEPSSCSPQLG Trigger: ACCTAGCTGAGGTGAACAACTACTGGGCTCTGAACCTGACCTCCATGCTCTGTTTGACTTCCGGCACCTTGAATGCCTTCCAGGATAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | ACAAACAAGAGCCTCAACCTCATCCGTCCAGTGTTTCTGCTTCTCCTGCTCTTCCAGCTCCTCCTTCAGTaGCCGCAGCATCGACTCACT | + |
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Preference number: 5 (lower is better) Translates to: TNKSLNLIRPVFLLLLLFQLLLQ*PQHRLT Trigger: AGTGAGTCGATGCTGCGGCAACTGAAGGAGGAGCTG...GAAGAGCAGGAGAAGCAGAAACACTGGACGGATGAGGTTGAGGCTCTTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS-3UTR CAA 90 bp | CAGTACAACAAACAAATGAAGTTCAAGGAGCATCCATCCAGACGTGATGCCCTCTTCAACTTCTGCAGTTaGCTCCTTAACTCTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QYNKQMKFKEHPSRRDALFNFCS*LLNSGS Trigger: GGACCCAGAGTTAAGGAGCAAACTGCAGAAGTTGAA...GAGGGCATCACGTCTGGATGGATGCTCCTTGAACTTCATTTGTTTGTTGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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| CDS GCA 72 bp | AGCATCACGGAACCGGGAGACAGCAACCGGGCCAGCTaGGGGGCCAGGGCGCGACCAAAGCCCCGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SITEPGDSNRAS*GARARPKPREA Trigger: GGCCTCCCGGGGCTTTGGTCGCGCCCTGGCCCCGCAGCTGGCCCGGTTGCTGTCTCCCGGTTCCGTGATGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS GCA 72 bp | GGCCTCGGGAGCTCGCGTACTGCGCTCAGCAACCGCTaGACGCCAGCCTCGGTGCCCAGATCGGCGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GLGSSRTALSNR*TPASVPRSAAA Trigger: GGCAGCCGCCGATCTGGGCACCGAGGCTGGCGTGCAGCGGTTGCTGAGCGCAGTACGCGAGCTCCCGAGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS GCA 72 bp | CCGCTGCACGCCAGCCTCGGTGCCCAGATCGGCGGCTaGCAGCACCACTTTCAGGTCAGGCTGCTGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PLHASLGAQIGG*QHHFQVRLLSA Trigger: GGCGCTCAGCAGCCTGACCTGAAAGTGGTGCTGGCAGCCGCCGATCTGGGCACCGAGGCTGGCGTGCAGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS GCA 72 bp | GTACTGCGCTCAGCAACCGCTGCACGCCAGCCTCGGTaGCCAGATCGGCGGCTGCCAGCACCACTTTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VLRSATAARQPR*PDRRLPAPLSG Trigger: ACCTGAAAGTGGTGCTGGCAGCCGCCGATCTGGGCACCGAGGCTGGCGTGCAGCGGTTGCTGAGCGCAGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS CCA 72 bp | CCGAGCCAACTGCTGCATGTCATTGTCCAGGGGACCTaGAGCATAGCTCAGCACCCGCACACTCGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSQLLHVIVQGT*SIAQHPHTRFL Trigger: GAGGAACCGAGTGTGCGGGTGCTGAGCTATGCTCCAGGTCCCCTGGACAATGACATGCAGCAGTTGGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000204757.3 |
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| CDS GCA 72 bp | CTCCTCCTTCAGTTGCCGCAGCATCGACTCACTGCGTaGGCTTACGAGCATCACGGAACCGGGAGACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLQLPQHRLTA*AYEHHGTGRQQ Trigger: TTGCTGTCTCCCGGTTCCGTGATGCTCGTAAGCGCACGCAGTGAGTCGATGCTGCGGCAACTGAAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045986.8 ENSMUST00000174286.3 ENSMUST00000174769.2 ENSMUST00000204757.3 |
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| CDS TCA 72 bp | CCCAGCCTTTGTAGGGCTCAGCTAGGTCATTCACGTTaGGGAAGCCTTTGGAAACATCCCCAAGAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSLCRAQLGHSR*GSLWKHPQEWL Trigger: CAGCCACTCTTGGGGATGTTTCCAAAGGCTTCCTCAACGTGAATGACCTAGCTGAGCCCTACAAAGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174286.3 |
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| CDS CCA 72 bp | GGAAGGCATTCAAGGTGCCGGAAGTCAAACAGAGCATaGAGGTCAGGTTCAGAGCCCAGTAGTTGTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: GRHSRCRKSNRA*RSGSEPSSCSP Trigger: AGGTGAACAACTACTGGGCTCTGAACCTGACCTCCATGCTCTGTTTGACTTCCGGCACCTTGAATGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045986.8 ENSMUST00000204757.3 |
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