Pregenerated sensors for SPPL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029550Ensembl transcript IDs: ENSMUST00000031530.9, ENSMUST00000128590.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCACGATGCCAGCGGCCCCGGGAAGGAACAGACTCTAGGGCCTaGCGCCTCGCACCCAGGCAGCAGCTAACCAAGTGTGAGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: RPRCQRPREGTDSRA*RLAPRQQLTKCEVM Trigger: CATCACCTCACACTTGGTTAGCTGCTGCCTGGGTGCGAGGCGGCAGGCCCTAGAGTCTGTTCCTTCCCGGGGCCGCTGGCATCGTGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 90 bp | GCACTCTGCACAATGTCTGCAGGAATAGGGACAGGCAGGCCACGATaGCAGCGGCCCCGGGAAGGAACAGACTCTAGGGCCTGCCGCCTC | + |
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Preference number: 1 (lower is better) Translates to: ALCTMSAGIGTGRPR*QRPREGTDSRACRL Trigger: GAGGCGGCAGGCCCTAGAGTCTGTTCCTTCCCGGGGCCGCTGGCATCGTGGCCTGCCTGTCCCTATTCCTGCAGACATTGTGCAGAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 90 bp | GGGAGACAGCAGCGTGTGCGAGGAAGCCAGGTAAACTGTTCTACATaGTCCCATGACAGCAAGCCCCCGGCAGCTGCATGGCGTGACCTT | + |
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Preference number: 1 (lower is better) Translates to: GRQQRVRGSQVNCST*SHDSKPPAAAWRDL Trigger: AAGGTCACGCCATGCAGCTGCCGGGGGCTTGCTGTCATGGGAGCATGTAGAACAGTTTACCTGGCTTCCTCGCACACGCTGCTGTCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 90 bp | CAAACGCTCCCCTCAGACACACACTCCAGTCACACTGCAGTTCCGTaGGCAGGCATGCCTGAGTCAGGCCAGCTTGTAGAGGGAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: QTLPSDTHSSHTAVP*AGMPESGQLVEGTK Trigger: TTTTGTTCCCTCTACAAGCTGGCCTGACTCAGGCATGCCTGCTCACGGAACTGCAGTGTGACTGGAGTGTGTGTCTGAGGGGAGCGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 90 bp | ACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTaGCACGCTGCTCCATGGACACGATGGGCTGTGCACTCTGCACAA | + |
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Preference number: 1 (lower is better) Translates to: TPQQSLKTTEEPTTW*HAAPWTRWAVHSAQ Trigger: TTGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 90 bp | CAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTaGTGGCACGCTGCTCCATGGACACGATGGGCTGTGCACTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QTPQQSLKTTEEPTT*WHAAPWTRWAVHSA Trigger: TGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 90 bp | CTCTGTCTCCAGCTCCTGGACTTCAGCTCCATTTGCAGAGGCAACTaGCATTTGTCCCCACAGCCTGCTGTCACCACAGGTAAACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LCLQLLDFSSICRGN*HLSPQPAVTTGKLR Trigger: CCTCAGTTTACCTGTGGTGACAGCAGGCTGTGGGGACAAATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 90 bp | ACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTaGTCCATGGACACGATGGGCTGTGCACTCTGCACAATGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TESEDDRGTNNLVAR*SMDTMGCALCTMSA Trigger: TGCAGACATTGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 90 bp | CCAGGTTTTGAAGTCACAGCAGCAGCCTGCTCTGTCTCCAGCTCCTaGACTTCAGCTCCATTTGCAGAGGCAACTGACATTTGTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: PGFEVTAAACSVSSS*TSAPFAEATDICPH Trigger: GTGGGGACAAATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGACAGAGCAGGCTGCTGCTGTGACTTCAAAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 90 bp | AACTGTTCTACATGCTCCCATGACAGCAAGCCCCCGGCAGCTGCATaGCGTGACCTTAGCAGGCTTAGTCGCTGTTTACTCACAGATATC | + |
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Preference number: 1 (lower is better) Translates to: NCSTCSHDSKPPAAA*RDLSRLSRCLLTDI Trigger: GATATCTGTGAGTAAACAGCGACTAAGCCTGCTAAGGTCACGCCATGCAGCTGCCGGGGGCTTGCTGTCATGGGAGCATGTAGAACAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 90 bp | GCAACTGACATTTGTCCCCACAGCCTGCTGTCACCACAGGTAAACTaGGGCTGTGATCATCACAGCAAGGACAGAGTTGCGTTGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: ATDICPHSLLSPQVN*GCDHHSKDRVALLF Trigger: AAAAAGCAACGCAACTCTGTCCTTGCTGTGATGATCACAGCCTCAGTTTACCTGTGGTGACAGCAGGCTGTGGGGACAAATGTCAGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 90 bp | TGGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGGAGGGTTCACTaGAGAGACTTCGGTCTGCTAATGGATTTTCTTCCATTTAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: WSPQRKLVPEFRRVH*RDFGLLMDFLPFSV Trigger: AACACTAAATGGAAGAAAATCCATTAGCAGACCGAAGTCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CAA 90 bp | CAGGCTCTGTGCAGCCCACGGACAGCAACAGCGCGGGGCCAGGTTTaGAAGTCACAGCAGCAGCCTGCTCTGTCTCCAGCTCCTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: QALCSPRTATARGQV*KSQQQPALSPAPGL Trigger: AAGTCCAGGAGCTGGAGACAGAGCAGGCTGCTGCTGTGACTTCAAAACCTGGCCCCGCGCTGTTGCTGTCCGTGGGCTGCACAGAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACTTCTACATGCTCCCATaGCAGCAAGCCCCCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ESEDDRGTNNLVARCSMDFYMLP*QQAPGS Trigger: GCTGCCGGGGGCTTGCTGTCATGGGAGCATGTAGAA...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR GCA 90 bp | TCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCAGGCGAAGGGCCGGCCTaGCCCTTCTGGAAGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SNPSTESEDDRGTNNLVAGEGPA*PFWKGP Trigger: TGGACCCTTCCAGAAGGGGCAGGCCGGCCCTTCGCC...TGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACGCCCCCAGAGGAAACTaGTCCCAGAGTTTCGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ESEDDRGTNNLVARCSMDAPRGN*SQSFGG Trigger: CCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGC...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACCCCTGGGTCTCTGTATaGAGCCCCCAGAGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: ESEDDRGTNNLVARCSMDPWVSV*SPQRKL Trigger: CAGTTTCCTCTGGGGGCTCCATACAGAGACCCAGGG...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CAA 90 bp | TCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTaGGTGGCACGCTGCTCCATGGACACGATGGGCTGTGCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SNPSTESEDDRGTNN*VARCSMDTMGCALC Trigger: GCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGTCACAGCAGCAGCCTaGTCTGTCTCCAGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTPQQSLKTTEEPTTWWHVTAAA*SVSSSW Trigger: CCAGGAGCTGGAGACAGAGCAGGCTGCTGCTGTGAC...GTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACACGTCTGTCTCCAGCTCCTaGACTTCAGCTCCATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SEDDRGTNNLVARCSMDTSVSSS*TSAPFA Trigger: TGCAAATGGAGCTGAAGTCCAGGAGCTGGAGACAGA...CGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACACGCCTAATTTGCTACACTaGTCAAAAGGAGGAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SEDDRGTNNLVARCSMDTPNLLH*SKGGVP Trigger: GGGGACTCCTCCTTTTGATCAGTGTAGCAAATTAGG...CGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTAGTGAGCAGGCATGCCTaGGTCAGGCCAGCTTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LLTANTAGHSHYNKFLCVVSRHA*VRPACR Trigger: TCTACAAGCTGGCCTGACTCAGGCATGCCTGCTCAC...TACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTATGAGAAGAGAAGGGCTGTaGAGGGCTCCAGTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AHCQHGWTQSLQQILMCMRREGL*RAPVPS Trigger: AGAGGGCACTGGAGCCCTGCACAGCCCTTCTCTTCT...CATACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACAAGGGACTGAGGGCATaGAAAATACAGCGCACCAAT | + |
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Preference number: 2 (lower is better) Translates to: QTPQQSLKTTEEPTTWWHKGLRA*KIQRTN Trigger: ATTGGTGCGCTGTATTTTCCATGCCCTCAGTCCCTT...GTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACCACAAGTTAACAGTCTaGTGCAGATCCATAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: ESEDDRGTNNLVARCSMDHKLTV*CRSIKT Trigger: TGTTTTTATGGATCTGCACCAGACTGTTAACTTGTG...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR GCA 90 bp | TCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCAAAGTTAACAGTCTGGTaGAGATCCATAAAAACACGA | + |
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Preference number: 2 (lower is better) Translates to: SNPSTESEDDRGTNNLVAKLTVW*RSIKTR Trigger: TCGTGTTTTTATGGATCTGCACCAGACTGTTAACTT...TGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | GGGTCCACTCTCCCAGAGCGGAGAAGAGAAGGGCTGTaGAGGGCTCCAGTGCCCTCTGCAAACGCTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GSTLPERRREGL*RAPVPSANAPL Trigger: GAGGGGAGCGTTTGCAGAGGGCACTGGAGCCCTGCACAGCCCTTCTCTTCTCCGCTCTGGGAGAGTGGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 72 bp | CTGCCGCCTCGCACCCAGGCAGCAGCTAACCAAGTGTaGGGTGATGGTGATGCCAGGCTCTGTGCAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPPRTQAAANQV*GDGDARLCAAH Trigger: GTGGGCTGCACAGAGCCTGGCATCACCATCACCTCACACTTGGTTAGCTGCTGCCTGGGTGCGAGGCGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | ACAATGTCTGCAGGAATAGGGACAGGCAGGCCACGATaGCAGCGGCCCCGGGAAGGAACAGACTCTAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: TMSAGIGTGRPR*QRPREGTDSRA Trigger: GGCCCTAGAGTCTGTTCCTTCCCGGGGCCGCTGGCATCGTGGCCTGCCTGTCCCTATTCCTGCAGACATTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR-3UTR CAA 90 bp | TGGCACGCTGCTCCATGGACACGATGGGCTGTGCACTCTGCACAATGTCTGCAGGCGCGGGGCCAGGTTTaGAAGTCACAGCAGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: WHAAPWTRWAVHSAQCLQARGQV*KSQQQP Trigger: AGGCTGCTGCTGTGACTTCAAAACCTGGCCCCGCGC...CTGCAGACATTGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | GAGAAGAGAAGGGCTGTGCAGGGCTCCAGTGCCCTCTaGAAACGCTCCCCTCAGACACACACTCCAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: EKRRAVQGSSAL*KRSPQTHTPVT Trigger: TGTGACTGGAGTGTGTGTCTGAGGGGAGCGTTTGCAGAGGGCACTGGAGCCCTGCACAGCCCTTCTCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | CAGCGTGTGCGAGGAAGCCAGGTAAACTGTTCTACATaGTCCCATGACAGCAAGCCCCCGGCAGCTGCATGG | + |
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Preference number: 3 (lower is better) Translates to: QRVRGSQVNCST*SHDSKPPAAAW Trigger: CCATGCAGCTGCCGGGGGCTTGCTGTCATGGGAGCATGTAGAACAGTTTACCTGGCTTCCTCGCACACGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 72 bp | CCCTCAGACACACACTCCAGTCACACTGCAGTTCCGTaGGCAGGCATGCCTGAGTCAGGCCAGCTTGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSDTHSSHTAVP*AGMPESGQLVE Trigger: CTCTACAAGCTGGCCTGACTCAGGCATGCCTGCTCACGGAACTGCAGTGTGACTGGAGTGTGTGTCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | CTTGGTGGCACGCTGCTCCATGGACACGATGGGCTGTaGACTCTGCACAATGTCTGCAGGAATAGGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: LGGTLLHGHDGL*TLHNVCRNRDR Trigger: CCTGTCCCTATTCCTGCAGACATTGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | ACATGCTCCCATGACAGCAAGCCCCCGGCAGCTGCATaGCGTGACCTTAGCAGGCTTAGTCGCTGTTTACTC | + |
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Preference number: 3 (lower is better) Translates to: TCSHDSKPPAAA*RDLSRLSRCLL Trigger: GAGTAAACAGCGACTAAGCCTGCTAAGGTCACGCCATGCAGCTGCCGGGGGCTTGCTGTCATGGGAGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | GAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTaGTCCATGGACACGATGGGCTGTGCACTCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: EDDRGTNNLVAR*SMDTMGCALCT Trigger: TGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | TGCCCTGGGTCTCTGTATGGAGCCCCCAGAGGAAACTaGTCCCAGAGTTTCGGAGGGTTCACTGAAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: CPGSLYGAPRGN*SQSFGGFTEET Trigger: AGTCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCATACAGAGACCCAGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | CAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTaGCACGCTGCTCCATGGACACGATGGGCTGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: QSLKTTEEPTTW*HAAPWTRWAVH Trigger: GTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | CAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTaGTGGCACGCTGCTCCATGGACACGATGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: QQSLKTTEEPTT*WHAAPWTRWAV Trigger: CACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | AAAAATAGGGCAGAAGTTCTGCCCTGGGTCTCTGTATaGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGG | + |
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Preference number: 3 (lower is better) Translates to: KNRAEVLPWVSV*SPQRKLVPEFR Trigger: CCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCATACAGAGACCCAGGGCAGAACTTCTGCCCTATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | GAAGTCACAGCAGCAGCCTGCTCTGTCTCCAGCTCCTaGACTTCAGCTCCATTTGCAGAGGCAACTGACATT | + |
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Preference number: 3 (lower is better) Translates to: EVTAAACSVSSS*TSAPFAEATDI Trigger: AATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGACAGAGCAGGCTGCTGCTGTGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 72 bp | ATTTGTCCCCACAGCCTGCTGTCACCACAGGTAAACTaGGGCTGTGATCATCACAGCAAGGACAGAGTTGCG | + |
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Preference number: 3 (lower is better) Translates to: ICPHSLLSPQVN*GCDHHSKDRVA Trigger: CGCAACTCTGTCCTTGCTGTGATGATCACAGCCTCAGTTTACCTGTGGTGACAGCAGGCTGTGGGGACAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 72 bp | AGACAAAACCAACCCTTCAAACCCCTCAACAGAGTCTaGAGACGACAGAGGAACCAACAACTTGGTGGCACG | + |
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Preference number: 3 (lower is better) Translates to: RQNQPFKPLNRV*RRQRNQQLGGT Trigger: CGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGAAGGGTTGGTTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR TCA 72 bp | CAGAGGAAACTGGTCCCAGAGTTTCGGAGGGTTCACTaGAGAGACTTCGGTCTGCTAATGGATTTTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: QRKLVPEFRRVH*RDFGLLMDFLP Trigger: TGGAAGAAAATCCATTAGCAGACCGAAGTCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CCA 72 bp | ATAAACCAACCGCGTCCTGCTCACTGCCAACACGGCTaGACACAGTCATTACAACAAATTCTTATGTGTATG | + |
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Preference number: 3 (lower is better) Translates to: INQPRPAHCQHG*TQSLQQILMCM Trigger: CATACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAGGACGCGGTTGGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR GCA 72 bp | TATATATATGTACGTATGTATAAACCAACCGCGTCCTaGTCACTGCCAACACGGCTGGACACAGTCATTACA | + |
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Preference number: 3 (lower is better) Translates to: YIYVRMYKPTAS*SLPTRLDTVIT Trigger: TGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAGGACGCGGTTGGTTTATACATACGTACATATATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTCTCTGTATGGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGGAGGGCAGGCAGGAAACCTTaGGGCTTGGCAGGCGGACGA | + |
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Preference number: 4 (lower is better) Translates to: PWVSVWSPQRKLVPEFRRAGRKP*GLAGGR Trigger: TCGTCCGCCTGCCAAGCCTCAAGGTTTCCTGCCTGC...CCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCATACAGAGACCCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CAA 72 bp | TGCAGCCCACGGACAGCAACAGCGCGGGGCCAGGTTTaGAAGTCACAGCAGCAGCCTGCTCTGTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CSPRTATARGQV*KSQQQPALSPA Trigger: AGCTGGAGACAGAGCAGGCTGCTGCTGTGACTTCAAAACCTGGCCCCGCGCTGTTGCTGTCCGTGGGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | TGGCACGCTGCTCCATGGACACGATGGGCTGTGCACTCTGCACAATGTCTGCAGCATCACGCCCCACATTaGGTCCCAGGTGGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WHAAPWTRWAVHSAQCLQHHAPH*VPGGAS Trigger: GGAAGCTCCACCTGGGACCCAATGTGGGGCGTGATG...CTGCAGACATTGTGCAGAGTGCACAGCCCATCGTGTCCATGGAGCAGCGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR TCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACGCAGCTCGGCAGCAGTaGAACGCCCACAGCAACCGA | + |
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Preference number: 4 (lower is better) Translates to: ESEDDRGTNNLVARCSMDAARQQ*NAHSNR Trigger: TCGGTTGCTGTGGGCGTTTCACTGCTGCCGAGCTGC...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | AAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACACGATGGCCCAGAGATATTGGCTaGGCCAGGGGCCCCACACGA | + |
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Preference number: 4 (lower is better) Translates to: KTTEEPTTWWHAAPWTRWPRDIG*ARGPTR Trigger: TCGTGTGGGGCCCCTGGCCCAGCCAATATCTCTGGG...CCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | CTCGCACCCAGGCAGCAGCTAACCAAGTGTGAGGTGATGGTGATGCCAGGCTCTGGACGAAGGCGATCATaGCAACACAGAGACCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LAPRQQLTKCEVMVMPGSGRRRS*QHRDPW Trigger: CCATGGGTCTCTGTGTTGCCATGATCGCCTTCGTCC...AGAGCCTGGCATCACCATCACCTCACACTTGGTTAGCTGCTGCCTGGGTGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGGAGGGTTCACTGAAGAGACTGGAAACCTTGAGGCTTaGCAGGCGGACGAAGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: GAPRGNWSQSFGGFTEETGNLEA*QADEGD Trigger: ATCGCCTTCGTCCGCCTGCCAAGCCTCAAGGTTTCC...AGTCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | CTCGCACCCAGGCAGCAGCTAACCAAGTGTGAGGTGATGGTGATGCCAGGCTCTGAGGGGATTGTCAGCTaGCTGTGTGGCCACTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LAPRQQLTKCEVMVMPGSEGIVS*LCGHFH Trigger: GTGAAAGTGGCCACACAGCCAGCTGACAATCCCCTC...AGAGCCTGGCATCACCATCACCTCACACTTGGTTAGCTGCTGCCTGGGTGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACGGAACCGGGAGCTGCTaGACTTGGAGTGGAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ESEDDRGTNNLVARCSMDGTGSC*TWSGRA Trigger: AGCCCTTCCACTCCAAGTCCAGCAGCTCCCGGTTCC...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CAA 72 bp | CCTGCTCTGTCTCCAGCTCCTGGACTTCAGCTCCATTaGCAGAGGCAACTGACATTTGTCCCCACAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PALSPAPGLQLH*QRQLTFVPTAC Trigger: GCAGGCTGTGGGGACAAATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGACAGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | CGCTCCCCTCAGACACACACTCCAGTCACACTGCAGTTCCGTGAGCAGGCATGCAGAAGTGACTGCCAGTaGAGCTTGGGAAGACCAATT | + |
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Preference number: 4 (lower is better) Translates to: RSPQTHTPVTLQFREQACRSDCQ*SLGRPI Trigger: AATTGGTCTTCCCAAGCTCCACTGGCAGTCACTTCT...GCATGCCTGCTCACGGAACTGCAGTGTGACTGGAGTGTGTGTCTGAGGGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACCTGCTGGACTTGGAGTaGAAGGGCTCAGACCACATC | + |
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Preference number: 4 (lower is better) Translates to: ESEDDRGTNNLVARCSMDLLDLE*KGSDHI Trigger: GATGTGGTCTGAGCCCTTCCACTCCAAGTCCAGCAG...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | ACACTGATCAAAAGGAGGAGTCCCCACAGCCCACAAGTCTATCAGTTCAGCGCAGGGAGCTGCTGGACTTaGAGTGGAAGGGCTCAGACC | + |
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Preference number: 4 (lower is better) Translates to: TLIKRRSPHSPQVYQFSAGSCWT*SGRAQT Trigger: GGTCTGAGCCCTTCCACTCCAAGTCCAGCAGCTCCC...TGCGCTGAACTGATAGACTTGTGGGCTGTGGGGACTCCTCCTTTTGATCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTGGGCAGCTCGGTGGATaGGAGACGCCACAGTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAHCQHGWTQSLQQILMCGQLGG*ETPQSQ Trigger: CTGCGACTGTGGCGTCTCGCATCCACCGAGCTGCCC...ACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| 3UTR CAA 72 bp | TCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTaGGTGGCACGCTGCTCCATGGACACGATGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: STESEDDRGTNN*VARCSMDTMGC Trigger: ACAGCCCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | TCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACCAGGTGGAGCTTCCTaGACAGAACGTCGAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SNPSTESEDDRGTNNLVAPGGAS*TERRGD Trigger: ATCCCCTCGACGTTCTGTCCAGGAAGCTCCACCTGG...TGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | CTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTAGGCTGGGCAGCTCGGTaGATGCGAGACGCCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LLTANTAGHSHYNKFLCVGWAAR*MRDATV Trigger: GACTGTGGCGTCTCGCATCCACCGAGCTGCCCAGCC...TACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | GTCTCCAGCTCCTGGACTTCAGCTCCATTTGCAGAGGCAACTGACATTTGTCCCGGAACAGTGCTTGGGTaGAATCAATGGTCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: VSSSWTSAPFAEATDICPGTVLG*NQWSGC Trigger: GCATCCAGACCATTGATTCCACCCAAGCACTGTTCC...GGGACAAATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR TCA 90 bp | CCAACCCTTCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTAGAAATGTCGACACTTaGCTGGAGTCCACCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PTLQTPQQSLKTTEEPTTRNVDT*LESTRE Trigger: TTCCCTGGTGGACTCCAGTCAAGTGTCGACATTTCT...AGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGAAGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CCA 90 bp | CCAACCCTTCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTATGTCGACACTTGACTaGAGTCCACCAGGGAATAGG | + |
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Preference number: 4 (lower is better) Translates to: PTLQTPQQSLKTTEEPTTMSTLD*SPPGNR Trigger: CCTATTCCCTGGTGGACTCCAGTCAAGTGTCGACAT...AGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGAAGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR TCA 90 bp | GCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTATGGTTGAAGATGTAGGCTaGGAAGAACACCCAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: AHCQHGWTQSLQQILMCMVEDVG*EEHPED Trigger: GTCTTCTGGGTGTTCTTCTCAGCCTACATCTTCAAC...CATACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR GCA 90 bp | CTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTAAATCGGGAGGAACAGTaGTTGGGTGGAATCAATGGT | + |
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Preference number: 4 (lower is better) Translates to: LLTANTAGHSHYNKFLCVNREEQ*LGGING Trigger: ACCATTGATTCCACCCAAGCACTGTTCCTCCCGATT...TACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTAATCAATGGTCTGGATaGTGTTATTGGTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAHCQHGWTQSLQQILMCNQWSG*CYWCCC Trigger: GCAACAGCACCAATAACAGCATCCAGACCATTGATT...ACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR GCA 90 bp | CTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTAAGCAAAAGCTATTGTTaGAAGAACTGCTGTACATAT | + |
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Preference number: 4 (lower is better) Translates to: LLTANTAGHSHYNKFLCVSKSYC*KNCCTY Trigger: ATATGTACAGCAGTTCTTGCAACAATAGCTTTTGCT...TACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | CTCGCACCCAGGCAGCAGCTAACCAAGTGTGAGGTGATGGTGATGCCAGGCTCTCGGGAGCTGCTGGACTaGGAGTGGAAGGGCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LAPRQQLTKCEVMVMPGSRELLD*EWKGSD Trigger: GTCTGAGCCCTTCCACTCCAAGTCCAGCAGCTCCCG...AGAGCCTGGCATCACCATCACCTCACACTTGGTTAGCTGCTGCCTGGGTGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | AAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACACGATGGAGCAGGCAGGAAACCTaGAGGCTTGGCAGGCGGACG | + |
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Preference number: 5 (lower is better) Translates to: KTTEEPTTWWHAAPWTRWSRQET*RLGRRT Trigger: CGTCCGCCTGCCAAGCCTCAAGGTTTCCTGCCTGCT...CCATCGTGTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | ATGGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGGAGGGTTCACTGAAGAGAACATCACGCCCCACATaGGGTCCCAGGTGGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: MEPPEETGPRVSEGSLKRTSRPT*GPRWSF Trigger: GAAGCTCCACCTGGGACCCAATGTGGGGCGTGATGT...TCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGCTCCTGGACTTCAGCTCCATTTGCAGAGGCAACTGACATTTGTCCCGACTGCCAGTGGAGCTaGGGAAGACCAATTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSSSWTSAPFAEATDICPDCQWS*GRPIFQ Trigger: CTGGAAAATTGGTCTTCCCAAGCTCCACTGGCAGTC...GGGACAAATGTCAGTTGCCTCTGCAAATGGAGCTGAAGTCCAGGAGCTGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | CAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACCAGAAATGTCGACACTaGACTGGAGTCCACCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: QTPQQSLKTTEEPTTWWHQKCRH*TGVHQG Trigger: TCCCTGGTGGACTCCAGTCAAGTGTCGACATTTCTG...GTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | ATGGAGCCCCCAGAGGAAACTGGTCCCAGAGTTTCGGAGGGTTCACTGAAGAGAGAGCCAGAAGAACTGTaGCTGTCTTTCTCCTTATCT | + |
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Preference number: 5 (lower is better) Translates to: MEPPEETGPRVSEGSLKREPEEL*LSFSLS Trigger: AGATAAGGAGAAAGACAGCAACAGTTCTTCTGGCTC...TCTCTTCAGTGAACCCTCCGAAACTCTGGGACCAGTTTCCTCTGGGGGCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTCACTGCCAACACGGCTGGACACAGTCATTACAACAAATTCTTATGTGTCGGGAGGAACAGTGCTaGGGTGGAATCAATGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PAHCQHGWTQSLQQILMCREEQC*GGINGL Trigger: CAGACCATTGATTCCACCCAAGCACTGTTCCTCCCG...ACACATAAGAATTTGTTGTAATGACTGTGTCCAGCCGTGTTGGCAGTGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | GAGTCTGAAGACGACAGAGGAACCAACAACTTGGTGGCACGCTGCTCCATGGACAAGCAAAAGCTATTGTaGCAAGAACTGCTGTACATA | + |
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Preference number: 5 (lower is better) Translates to: ESEDDRGTNNLVARCSMDKQKLL*QELLYI Trigger: TATGTACAGCAGTTCTTGCAACAATAGCTTTTGCTT...GTCCATGGAGCAGCGTGCCACCAAGTTGTTGGTTCCTCTGTCGTCTTCAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS-3UTR CAA 90 bp | CCAACCCTTCAAACCCCTCAACAGAGTCTGAAGACGACAGAGGAACCAACAACTCGAGTCACCACTGGCTaGTTTCTTGTAGTTGTCATA | + |
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Preference number: 5 (lower is better) Translates to: PTLQTPQQSLKTTEEPTTRVTTG*FLVVVI Trigger: TATGACAACTACAAGAAACAAGCCAGTGGTGACTCG...AGTTGTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGAAGGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS CCA 72 bp | CATCACGCCCCACATTGGGTCCCAGGTGGAGCTTCCTaGACAGAACGTCGAGGGGATTGTCAGCTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HHAPHWVPGGAS*TERRGDCQLAV Trigger: CACAGCCAGCTGACAATCCCCTCGACGTTCTGTCCAGGAAGCTCCACCTGGGACCCAATGTGGGGCGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031530.9 |
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| CDS CAA 72 bp | GACTATAAGAAGAATGGATATCAGAAATGTCGACACTaGACTGGAGTCCACCAGGGAATAGGCCCACGAATA | + |
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Preference number: 6 (lower is better) Translates to: DYKKNGYQKCRH*TGVHQGIGPRI Trigger: TATTCGTGGGCCTATTCCCTGGTGGACTCCAGTCAAGTGTCGACATTTCTGATATCCATTCTTCTTATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031530.9 ENSMUST00000128590.3 |
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